Pregenerated sensors for ZFP879 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044296Ensembl transcript IDs: ENSMUST00000049625.2, ENSMUST00000109133.2, ENSMUST00000109134.8
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CACTTTAGTGAAATGACCCTGAAGCAGCTGTGCGTTACCCACGCAGACTTCTTTTCATCACTCTCCAGATaGATTCTGTTACAGTCAGCG | + |
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Preference number: 2 (lower is better) Translates to: HFSEMTLKQLCVTHADFFSSLSR*ILLQSA Trigger: CGCTGACTGTAACAGAATTCATCTGGAGAGTGATGA...AAAGAAGTCTGCGTGGGTAACGCACAGCTGCTTCAGGGTCATTTCACTAAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCTATTTTGCACTCACACTCAAAGGCAGACAACACAGATCCTAGACTGGTCTTCATCACTCTCCAGATaGATTCTGTTACAGTCAGCG | + |
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Preference number: 2 (lower is better) Translates to: QLFCTHTQRQTTQILDWSSSLSR*ILLQSA Trigger: CGCTGACTGTAACAGAATTCATCTGGAGAGTGATGA...AGACCAGTCTAGGATCTGTGTTGTCTGCCTTTGAGTGTGAGTGCAAAATAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| 3UTR-3UTR TCA 90 bp | AATTCAGCTATTTTGCACTCACACTCAAAGGCAGACAACACAGATCCTAGACTGTCATCACTCTCCAGATaGATTCTGTTACAGTCAGCG | + |
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Preference number: 2 (lower is better) Translates to: NSAILHSHSKADNTDPRLSSLSR*ILLQSA Trigger: CGCTGACTGTAACAGAATTCATCTGGAGAGTGATGA...CAGTCTAGGATCTGTGTTGTCTGCCTTTGAGTGTGAGTGCAAAATAGCTGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| 3UTR-3UTR GCA 90 bp | CACTTTAGTGAAATGACCCTGAAGCAGCTGTGCGTTACCCACGCAGACTTCTTTATACTGCATCACAAATaGCTGATGTTTGCTGAAATC | + |
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Preference number: 2 (lower is better) Translates to: HFSEMTLKQLCVTHADFFILHHK*LMFAEI Trigger: GATTTCAGCAAACATCAGGCATTTGTGATGCAGTAT...AAAGAAGTCTGCGTGGGTAACGCACAGCTGCTTCAGGGTCATTTCACTAAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
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| 3UTR-3UTR TCA 90 bp | AATTCAGCTATTTTGCACTCACACTCAAAGGCAGACAACACAGATCCTAGACTGCAACTCCACCATCAGTaGAACTTCAAAGAATCCACA | + |
|
Preference number: 2 (lower is better) Translates to: NSAILHSHSKADNTDPRLQLHHQ*NFKEST Trigger: TGTGGATTCTTTGAAGTTTCACTGATGGTGGAGTTG...CAGTCTAGGATCTGTGTTGTCTGCCTTTGAGTGTGAGTGCAAAATAGCTGAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| 3UTR-3UTR GCA 90 bp | TTTAGTGAAATGACCCTGAAGCAGCTGTGCGTTACCCACGCAGACTTCTTTTCTGATCTACCGCATGCATaGATTTTACTTCTATGGTTT | + |
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Preference number: 2 (lower is better) Translates to: FSEMTLKQLCVTHADFFSDLPHA*ILLLWF Trigger: AAACCATAGAAGTAAAATGCATGCATGCGGTAGATC...AGAAAAGAAGTCTGCGTGGGTAACGCACAGCTGCTTCAGGGTCATTTCACTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCTATTTTGCACTCACACTCAAAGGCAGACAACACAGATCCTAGACTGGTCTATACTGCATCACAAATaGCTGATGTTTGCTGAAATC | + |
|
Preference number: 2 (lower is better) Translates to: QLFCTHTQRQTTQILDWSILHHK*LMFAEI Trigger: GATTTCAGCAAACATCAGGCATTTGTGATGCAGTAT...AGACCAGTCTAGGATCTGTGTTGTCTGCCTTTGAGTGTGAGTGCAAAATAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| 3UTR-3UTR GCA 90 bp | CTTTCAATCTCAGTGTCAACTCCACCATCAGTGAAACTTCAAAGAATCCACATAGATCTACCGCATGCATaGATTTTACTTCTATGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LSISVSTPPSVKLQRIHIDLPHA*ILLLWF Trigger: AAACCATAGAAGTAAAATGCATGCATGCGGTAGATC...TATGTGGATTCTTTGAAGTTTCACTGATGGTGGAGTTGACACTGAGATTGAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| 3UTR TCA 72 bp | CAAGTTTATACTGCATCACAAATGCCTGATGTTTGCTaGAATCTAACTTCATGCTCAGCCCCGACTAACTGC | + |
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Preference number: 3 (lower is better) Translates to: QVYTASQMPDVC*NLTSCSAPTNC Trigger: GCAGTTAGTCGGGGCTGAGCATGAAGTTAGATTTCAGCAAACATCAGGCATTTGTGATGCAGTATAAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| 3UTR TCA 72 bp | TTAATCTTTCAATCTCAGTGTCAACTCCACCATCAGTaGAACTTCAAAGAATCCACATACGATGTAACATTT | + |
|
Preference number: 3 (lower is better) Translates to: LIFQSQCQLHHQ*NFKESTYDVTF Trigger: AAATGTTACATCGTATGTGGATTCTTTGAAGTTTCACTGATGGTGGAGTTGACACTGAGATTGAAAGATTAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR TCA 90 bp | CTGTTACAGTCAGCGGAGAAGGAATGTCTCAAGGCAGATCTACCGCATGCATGCGTGGATGTTAAGCCGTaGGAGCCAGGAAAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LLQSAEKECLKADLPHACVDVKP*EPGKGL Trigger: AAGGCCTTTTCCTGGCTCTCACGGCTTAACATCCAC...GCATGCATGCGGTAGATCTGCCTTGAGACATTCCTTCTCCGCTGACTGTAACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR TCA 90 bp | TTTAGTGAAATGACCCTGAAGCAGCTGTGCGTTACCCACGCAGACTTCTTTTCTGGGATGAGCGTTGGCTaGAAGCTTTCCGACAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: FSEMTLKQLCVTHADFFSGMSVG*KLSDSP Trigger: AGGGCTGTCGGAAAGCTTTCAGCCAACGCTCATCCC...AGAAAAGAAGTCTGCGTGGGTAACGCACAGCTGCTTCAGGGTCATTTCACTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
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| CDS-3UTR TCA 90 bp | CTCCAGATGAATTCTGTTACAGTCAGCGGAGAAGGAATGTCTCAAGGCAGATCTGGGATGAGCGTTGGCTaGAAGCTTTCCGACAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LQMNSVTVSGEGMSQGRSGMSVG*KLSDSP Trigger: AGGGCTGTCGGAAAGCTTTCAGCCAACGCTCATCCC...AGATCTGCCTTGAGACATTCCTTCTCCGCTGACTGTAACAGAATTCATCTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR TCA 90 bp | CTGTTACAGTCAGCGGAGAAGGAATGTCTCAAGGCAGATCTACCGCATGCATGCGTGCTGAATCAGAGATaGGCACTGGCTAAAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLQSAEKECLKADLPHACVLNQR*ALAKGS Trigger: AGAGCCTTTAGCCAGTGCTCATCTCTGATTCAGCAC...GCATGCATGCGGTAGATCTGCCTTGAGACATTCCTTCTCCGCTGACTGTAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR TCA 90 bp | CTGTTACAGTCAGCGGAGAAGGAATGTCTCAAGGCAGATCTACCGCATGCATGCGGGCCGAGCTTTGATTaGAGGCTTTTTCACAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: LLQSAEKECLKADLPHACGPSFD*RLFHSH Trigger: GTGACTGTGAAAAAGCCTTCAATCAAAGCTCGGCCC...GCATGCATGCGGTAGATCTGCCTTGAGACATTCCTTCTCCGCTGACTGTAACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR TCA 90 bp | TGTTACAGTCAGCGGAGAAGGAATGTCTCAAGGCAGATCTACCGCATGCATGCAGAGATGAGCTCTGACTaGACGCTTTCCCGCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CYSQRRRNVSRQIYRMHAEMSSD*TLSRKL Trigger: AAGCTTGCGGGAAAGCGTTCAGTCAGAGCTCATCTC...TGCATGCATGCGGTAGATCTGCCTTGAGACATTCCTTCTCCGCTGACTGTAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR CCA 90 bp | TTTAGTGAAATGACCCTGAAGCAGCTGTGCGTTACCCACGCAGACTTCTTTTCTCTCCTGAACCTGGGCTaGCAGCAACCTCGTGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSEMTLKQLCVTHADFFSLLNLG*QQPRGH Trigger: ATGACCACGAGGTTGCTGCCAGCCCAGGTTCAGGAG...AGAAAAGAAGTCTGCGTGGGTAACGCACAGCTGCTTCAGGGTCATTTCACTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
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| CDS-3UTR CCA 90 bp | CTGTTACAGTCAGCGGAGAAGGAATGTCTCAAGGCAGATCTACCGCATGCATGCTTGCATTTACAAAGCTaGCGGGCTCGGTTGAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLQSAEKECLKADLPHACLHLQS*RARLNP Trigger: GGGATTCAACCGAGCCCGCCAGCTTTGTAAATGCAA...GCATGCATGCGGTAGATCTGCCTTGAGACATTCCTTCTCCGCTGACTGTAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR TCA 90 bp | CACTTTAGTGAAATGACCCTGAAGCAGCTGTGCGTTACCCACGCAGACTTCTTTGAGATGAGCTCTGACTaGACGCTTTCCCGCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HFSEMTLKQLCVTHADFFEMSSD*TLSRKL Trigger: AAGCTTGCGGGAAAGCGTTCAGTCAGAGCTCATCTC...AAAGAAGTCTGCGTGGGTAACGCACAGCTGCTTCAGGGTCATTTCACTAAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
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| CDS-3UTR TCA 90 bp | GTCAGCGGAGAAGGAATGTCTCAAGGCAGATCTACCGCATGCATGCATTTTACTGAGATGAGCTCTGACTaGACGCTTTCCCGCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSGEGMSQGRSTACMHFTEMSSD*TLSRKL Trigger: AAGCTTGCGGGAAAGCGTTCAGTCAGAGCTCATCTC...AGTAAAATGCATGCATGCGGTAGATCTGCCTTGAGACATTCCTTCTCCGCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR CCA 90 bp | CAGCTATTTTGCACTCACACTCAAAGGCAGACAACACAGATCCTAGACTGGTCTGCCAGGGATGAGCGTTaGCTGAAAGCTTTCCGACAG | + |
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Preference number: 4 (lower is better) Translates to: QLFCTHTQRQTTQILDWSARDER*LKAFRQ Trigger: CTGTCGGAAAGCTTTCAGCCAACGCTCATCCCTGGC...AGACCAGTCTAGGATCTGTGTTGTCTGCCTTTGAGTGTGAGTGCAAAATAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR TCA 90 bp | TGTTACAGTCAGCGGAGAAGGAATGTCTCAAGGCAGATCTACCGCATGCATGCATCTGCTTGTTCTAACTaGGCGATGACCTTTGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: CYSQRRRNVSRQIYRMHASACSN*AMTFGL Trigger: CAAGCCAAAGGTCATCGCTCAGTTAGAACAAGCAGA...TGCATGCATGCGGTAGATCTGCCTTGAGACATTCCTTCTCCGCTGACTGTAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
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| CDS-3UTR TCA 90 bp | CAGCTATTTTGCACTCACACTCAAAGGCAGACAACACAGATCCTAGACTGGTCTGTCTACAGCCTCTTCTaGCAGAAAGCAGCATCTCGC | + |
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Preference number: 4 (lower is better) Translates to: QLFCTHTQRQTTQILDWSVYSLF*QKAASR Trigger: GCGAGATGCTGCTTTCTGTCAGAAGAGGCTGTAGAC...AGACCAGTCTAGGATCTGTGTTGTCTGCCTTTGAGTGTGAGTGCAAAATAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR TCA 90 bp | CAGCTATTTTGCACTCACACTCAAAGGCAGACAACACAGATCCTAGACTGGTCTGTGGATGTTAAGCCGTaGGAGCCAGGAAAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: QLFCTHTQRQTTQILDWSVDVKP*EPGKGL Trigger: AAGGCCTTTTCCTGGCTCTCACGGCTTAACATCCAC...AGACCAGTCTAGGATCTGTGTTGTCTGCCTTTGAGTGTGAGTGCAAAATAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR GCA 90 bp | TGTTACAGTCAGCGGAGAAGGAATGTCTCAAGGCAGATCTACCGCATGCATGCACTTTCCCACAGATGTTaGATTTACAAAGCTGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: CYSQRRRNVSRQIYRMHALSHRC*IYKAGG Trigger: CCCGCCAGCTTTGTAAATGCAACATCTGTGGGAAAG...TGCATGCATGCGGTAGATCTGCCTTGAGACATTCCTTCTCCGCTGACTGTAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR CCA 90 bp | GTCAGCGGAGAAGGAATGTCTCAAGGCAGATCTACCGCATGCATGCATTTTACTTTGCATTTACAAAGCTaGCGGGCTCGGTTGAATCCC | + |
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Preference number: 4 (lower is better) Translates to: VSGEGMSQGRSTACMHFTLHLQS*RARLNP Trigger: GGGATTCAACCGAGCCCGCCAGCTTTGTAAATGCAA...AGTAAAATGCATGCATGCGGTAGATCTGCCTTGAGACATTCCTTCTCCGCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR TCA 90 bp | TCTAATTCAGCTATTTTGCACTCACACTCAAAGGCAGACAACACAGATCCTAGAGGGATGAGCGTTGGCTaGAAGCTTTCCGACAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: SNSAILHSHSKADNTDPRGMSVG*KLSDSP Trigger: AGGGCTGTCGGAAAGCTTTCAGCCAACGCTCATCCC...TCTAGGATCTGTGTTGTCTGCCTTTGAGTGTGAGTGCAAAATAGCTGAATTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR TCA 90 bp | TTTAGTGAAATGACCCTGAAGCAGCTGTGCGTTACCCACGCAGACTTCTTTTCTGTGCTGAATCAGAGATaGGCACTGGCTAAAGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: FSEMTLKQLCVTHADFFSVLNQR*ALAKGS Trigger: AGAGCCTTTAGCCAGTGCTCATCTCTGATTCAGCAC...AGAAAAGAAGTCTGCGTGGGTAACGCACAGCTGCTTCAGGGTCATTTCACTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
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| CDS-3UTR TCA 90 bp | CTCCAGATGAATTCTGTTACAGTCAGCGGAGAAGGAATGTCTCAAGGCAGATCTGGGCCGAGCTTTGATTaGAGGCTTTTTCACAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: LQMNSVTVSGEGMSQGRSGPSFD*RLFHSH Trigger: GTGACTGTGAAAAAGCCTTCAATCAAAGCTCGGCCC...AGATCTGCCTTGAGACATTCCTTCTCCGCTGACTGTAACAGAATTCATCTGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR TCA 90 bp | TTTAGTGAAATGACCCTGAAGCAGCTGTGCGTTACCCACGCAGACTTCTTTTCTGGGCCGAGCTTTGATTaGAGGCTTTTTCACAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: FSEMTLKQLCVTHADFFSGPSFD*RLFHSH Trigger: GTGACTGTGAAAAAGCCTTCAATCAAAGCTCGGCCC...AGAAAAGAAGTCTGCGTGGGTAACGCACAGCTGCTTCAGGGTCATTTCACTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
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| CDS-3UTR GCA 90 bp | AATTCAGCTATTTTGCACTCACACTCAAAGGCAGACAACACAGATCCTAGACTGGTATGGACTCTCAGGTaGTGTGCCAGGGATGAGCGT | + |
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Preference number: 4 (lower is better) Translates to: NSAILHSHSKADNTDPRLVWTLR*CARDER Trigger: ACGCTCATCCCTGGCACAGCACCTGAGAGTCCATAC...CAGTCTAGGATCTGTGTTGTCTGCCTTTGAGTGTGAGTGCAAAATAGCTGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR CCA 90 bp | CAGCTATTTTGCACTCACACTCAAAGGCAGACAACACAGATCCTAGACTGGTCTCTGAGCGATGACCTTTaGCTTGGAAAACAGGATCCC | + |
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Preference number: 4 (lower is better) Translates to: QLFCTHTQRQTTQILDWSLSDDL*LGKQDP Trigger: GGGATCCTGTTTTCCAAGCCAAAGGTCATCGCTCAG...AGACCAGTCTAGGATCTGTGTTGTCTGCCTTTGAGTGTGAGTGCAAAATAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
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| CDS-3UTR CCA 90 bp | CTCCAGATGAATTCTGTTACAGTCAGCGGAGAAGGAATGTCTCAAGGCAGATCTTTGCATTTACAAAGCTaGCGGGCTCGGTTGAATCCC | + |
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Preference number: 4 (lower is better) Translates to: LQMNSVTVSGEGMSQGRSLHLQS*RARLNP Trigger: GGGATTCAACCGAGCCCGCCAGCTTTGTAAATGCAA...AGATCTGCCTTGAGACATTCCTTCTCCGCTGACTGTAACAGAATTCATCTGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR CCA 90 bp | CAGCTATTTTGCACTCACACTCAAAGGCAGACAACACAGATCCTAGACTGGTCTGTATTGACCGCAGAGTaGGAACTGAAGGCTTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: QLFCTHTQRQTTQILDWSVLTAE*ELKAFP Trigger: TGGGAAAGCCTTCAGTTCCCACTCTGCGGTCAATAC...AGACCAGTCTAGGATCTGTGTTGTCTGCCTTTGAGTGTGAGTGCAAAATAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR CCA 90 bp | TTTAGTGAAATGACCCTGAAGCAGCTGTGCGTTACCCACGCAGACTTCTTTTCTGTATTGACCGCAGAGTaGGAACTGAAGGCTTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: FSEMTLKQLCVTHADFFSVLTAE*ELKAFP Trigger: TGGGAAAGCCTTCAGTTCCCACTCTGCGGTCAATAC...AGAAAAGAAGTCTGCGTGGGTAACGCACAGCTGCTTCAGGGTCATTTCACTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
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| CDS-3UTR TCA 90 bp | AATTCAGCTATTTTGCACTCACACTCAAAGGCAGACAACACAGATCCTAGACTGGTGGATGTTAAGCCGTaGGAGCCAGGAAAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: NSAILHSHSKADNTDPRLVDVKP*EPGKGL Trigger: AAGGCCTTTTCCTGGCTCTCACGGCTTAACATCCAC...CAGTCTAGGATCTGTGTTGTCTGCCTTTGAGTGTGAGTGCAAAATAGCTGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR GCA 90 bp | TCAATCTCAGTGTCAACTCCACCATCAGTGAAACTTCAAAGAATCCACATACGAGTATGGACTCTCAGGTaGTGTGCCAGGGATGAGCGT | + |
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Preference number: 4 (lower is better) Translates to: SISVSTPPSVKLQRIHIRVWTLR*CARDER Trigger: ACGCTCATCCCTGGCACAGCACCTGAGAGTCCATAC...TCGTATGTGGATTCTTTGAAGTTTCACTGATGGTGGAGTTGACACTGAGATTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR CCA 90 bp | AGTTTTCCCAACACTCACAAGTTTATACTGCATCACAAATGCCTGATGTTTGCTCTCCTGAACCTGGGCTaGCAGCAACCTCGTGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: SFPNTHKFILHHKCLMFALLNLG*QQPRGH Trigger: ATGACCACGAGGTTGCTGCCAGCCCAGGTTCAGGAG...AGCAAACATCAGGCATTTGTGATGCAGTATAAACTTGTGAGTGTTGGGAAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
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| CDS-3UTR CCA 90 bp | TCAATCTCAGTGTCAACTCCACCATCAGTGAAACTTCAAAGAATCCACATACGAGCCAGGGATGAGCGTTaGCTGAAAGCTTTCCGACAG | + |
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Preference number: 4 (lower is better) Translates to: SISVSTPPSVKLQRIHIRARDER*LKAFRQ Trigger: CTGTCGGAAAGCTTTCAGCCAACGCTCATCCCTGGC...TCGTATGTGGATTCTTTGAAGTTTCACTGATGGTGGAGTTGACACTGAGATTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR CCA 90 bp | GTCAGCGGAGAAGGAATGTCTCAAGGCAGATCTACCGCATGCATGCATTTTACTGGCCTTTCTCCTGTGTaGATCCTCATATGTGTCATA | + |
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Preference number: 4 (lower is better) Translates to: VSGEGMSQGRSTACMHFTGLSPV*ILICVI Trigger: TATGACACATATGAGGATCCACACAGGAGAAAGGCC...AGTAAAATGCATGCATGCGGTAGATCTGCCTTGAGACATTCCTTCTCCGCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR TCA 90 bp | TTTAGTGAAATGACCCTGAAGCAGCTGTGCGTTACCCACGCAGACTTCTTTTCTGTTCTAACTGAGCGATaGCCTTTGGCTTGGAAAACA | + |
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Preference number: 4 (lower is better) Translates to: FSEMTLKQLCVTHADFFSVLTER*PLAWKT Trigger: TGTTTTCCAAGCCAAAGGTCATCGCTCAGTTAGAAC...AGAAAAGAAGTCTGCGTGGGTAACGCACAGCTGCTTCAGGGTCATTTCACTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
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| CDS-3UTR GCA 90 bp | GTGTCAACTCCACCATCAGTGAAACTTCAAAGAATCCACATACGATGTAACATTGTATGGACTCTCAGGTaGTGTGCCAGGGATGAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VSTPPSVKLQRIHIRCNIVWTLR*CARDER Trigger: ACGCTCATCCCTGGCACAGCACCTGAGAGTCCATAC...AATGTTACATCGTATGTGGATTCTTTGAAGTTTCACTGATGGTGGAGTTGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCAATCTCAGTGTCAACTCCACCATCAGTGAAACTTCAAAGAATCCACATAGCCAGGGATGAGCGTTaGCTGAAAGCTTTCCGACAG | + |
|
Preference number: 4 (lower is better) Translates to: LSISVSTPPSVKLQRIHIARDER*LKAFRQ Trigger: CTGTCGGAAAGCTTTCAGCCAACGCTCATCCCTGGC...TATGTGGATTCTTTGAAGTTTCACTGATGGTGGAGTTGACACTGAGATTGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR CCA 90 bp | CTCCAGATGAATTCTGTTACAGTCAGCGGAGAAGGAATGTCTCAAGGCAGATCTGGCCTTTCTCCTGTGTaGATCCTCATATGTGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LQMNSVTVSGEGMSQGRSGLSPV*ILICVI Trigger: TATGACACATATGAGGATCCACACAGGAGAAAGGCC...AGATCTGCCTTGAGACATTCCTTCTCCGCTGACTGTAACAGAATTCATCTGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
||
| CDS-3UTR TCA 90 bp | GTGTCAACTCCACCATCAGTGAAACTTCAAAGAATCCACATACGATGTAACATTGTCTACAGCCTCTTCTaGCAGAAAGCAGCATCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: VSTPPSVKLQRIHIRCNIVYSLF*QKAASR Trigger: GCGAGATGCTGCTTTCTGTCAGAAGAGGCTGTAGAC...AATGTTACATCGTATGTGGATTCTTTGAAGTTTCACTGATGGTGGAGTTGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR TCA 90 bp | AGTTTTCCCAACACTCACAAGTTTATACTGCATCACAAATGCCTGATGTTTGCTGTCTACAGCCTCTTCTaGCAGAAAGCAGCATCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SFPNTHKFILHHKCLMFAVYSLF*QKAASR Trigger: GCGAGATGCTGCTTTCTGTCAGAAGAGGCTGTAGAC...AGCAAACATCAGGCATTTGTGATGCAGTATAAACTTGTGAGTGTTGGGAAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
||
| CDS-3UTR CCA 90 bp | AATCTCAGTGTCAACTCCACCATCAGTGAAACTTCAAAGAATCCACATACGATGCTGAGCGATGACCTTTaGCTTGGAAAACAGGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: NLSVNSTISETSKNPHTMLSDDL*LGKQDP Trigger: GGGATCCTGTTTTCCAAGCCAAAGGTCATCGCTCAG...CATCGTATGTGGATTCTTTGAAGTTTCACTGATGGTGGAGTTGACACTGAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
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| CDS-3UTR CCA 90 bp | CTCCAGATGAATTCTGTTACAGTCAGCGGAGAAGGAATGTCTCAAGGCAGATCTCTTCTTTGGAAACTATaGGCTCAAACAAGCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQMNSVTVSGEGMSQGRSLLWKL*AQTSSS Trigger: GGAAGAGCTTGTTTGAGCCCATAGTTTCCAAAGAAG...AGATCTGCCTTGAGACATTCCTTCTCCGCTGACTGTAACAGAATTCATCTGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
||
| CDS-3UTR CCA 90 bp | TCAATCTCAGTGTCAACTCCACCATCAGTGAAACTTCAAAGAATCCACATACGACTCAGGGAGGAACTGTaGAAGAAGACTTTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SISVSTPPSVKLQRIHIRLREEL*KKTFPQ Trigger: CTGTGGGAAAGTCTTCTTCCACAGTTCCTCCCTGAG...TCGTATGTGGATTCTTTGAAGTTTCACTGATGGTGGAGTTGACACTGAGATTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
||
| CDS-3UTR CCA 90 bp | AATCTCAGTGTCAACTCCACCATCAGTGAAACTTCAAAGAATCCACATACGATGCTCAGGGAGGAACTGTaGAAGAAGACTTTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: NLSVNSTISETSKNPHTMLREEL*KKTFPQ Trigger: CTGTGGGAAAGTCTTCTTCCACAGTTCCTCCCTGAG...CATCGTATGTGGATTCTTTGAAGTTTCACTGATGGTGGAGTTGACACTGAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
||
| CDS-3UTR CCA 90 bp | TCAATCTCAGTGTCAACTCCACCATCAGTGAAACTTCAAAGAATCCACATACGAGTATTGACCGCAGAGTaGGAACTGAAGGCTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SISVSTPPSVKLQRIHIRVLTAE*ELKAFP Trigger: TGGGAAAGCCTTCAGTTCCCACTCTGCGGTCAATAC...TCGTATGTGGATTCTTTGAAGTTTCACTGATGGTGGAGTTGACACTGAGATTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
||
| CDS-3UTR TCA 90 bp | TCAATCTCAGTGTCAACTCCACCATCAGTGAAACTTCAAAGAATCCACATACGATCTGCTTGTTCTAACTaGGCGATGACCTTTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SISVSTPPSVKLQRIHIRSACSN*AMTFGL Trigger: CAAGCCAAAGGTCATCGCTCAGTTAGAACAAGCAGA...TCGTATGTGGATTCTTTGAAGTTTCACTGATGGTGGAGTTGACACTGAGATTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
||
| CDS-3UTR TCA 90 bp | AGTTTTCCCAACACTCACAAGTTTATACTGCATCACAAATGCCTGATGTTTGCTGTGCTGAATCAGAGATaGGCACTGGCTAAAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFPNTHKFILHHKCLMFAVLNQR*ALAKGS Trigger: AGAGCCTTTAGCCAGTGCTCATCTCTGATTCAGCAC...AGCAAACATCAGGCATTTGTGATGCAGTATAAACTTGTGAGTGTTGGGAAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTATTTTGCACTCACACTCAAAGGCAGACAACACAGATCCTAGACTGGTCTAAGGGTTTTTCTTATTaGCTGGTTGCTCCTCTAACT | + |
|
Preference number: 4 (lower is better) Translates to: QLFCTHTQRQTTQILDWSKGFSY*LVAPLT Trigger: AGTTAGAGGAGCAACCAGGCAATAAGAAAAACCCTT...AGACCAGTCTAGGATCTGTGTTGTCTGCCTTTGAGTGTGAGTGCAAAATAGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
||
| CDS-3UTR GCA 90 bp | TCTAATTCAGCTATTTTGCACTCACACTCAAAGGCAGACAACACAGATCCTAGACTTTCCCACAGATGTTaGATTTACAAAGCTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SNSAILHSHSKADNTDPRLSHRC*IYKAGG Trigger: CCCGCCAGCTTTGTAAATGCAACATCTGTGGGAAAG...TCTAGGATCTGTGTTGTCTGCCTTTGAGTGTGAGTGCAAAATAGCTGAATTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR GCA 90 bp | TCAATCTCAGTGTCAACTCCACCATCAGTGAAACTTCAAAGAATCCACATACGACTTTCCCACAGATGTTaGATTTACAAAGCTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SISVSTPPSVKLQRIHIRLSHRC*IYKAGG Trigger: CCCGCCAGCTTTGTAAATGCAACATCTGTGGGAAAG...TCGTATGTGGATTCTTTGAAGTTTCACTGATGGTGGAGTTGACACTGAGATTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR TCA 90 bp | CTTTCAATCTCAGTGTCAACTCCACCATCAGTGAAACTTCAAAGAATCCACATAGTTCTAACTGAGCGATaGCCTTTGGCTTGGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LSISVSTPPSVKLQRIHIVLTER*PLAWKT Trigger: TGTTTTCCAAGCCAAAGGTCATCGCTCAGTTAGAAC...TATGTGGATTCTTTGAAGTTTCACTGATGGTGGAGTTGACACTGAGATTGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
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| CDS-3UTR CCA 90 bp | AGTTTTCCCAACACTCACAAGTTTATACTGCATCACAAATGCCTGATGTTTGCTGGCCTTTCTCCTGTGTaGATCCTCATATGTGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SFPNTHKFILHHKCLMFAGLSPV*ILICVI Trigger: TATGACACATATGAGGATCCACACAGGAGAAAGGCC...AGCAAACATCAGGCATTTGTGATGCAGTATAAACTTGTGAGTGTTGGGAAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
||
| CDS-3UTR TCA 90 bp | GTGTTTTCTAATTCAGCTATTTTGCACTCACACTCAAAGGCAGACAACACAGATAAAGCAGCATCTCGCTaGAAGGGTTTTTCTTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: VFSNSAILHSHSKADNTDKAASR*KGFSYC Trigger: GCAATAAGAAAAACCCTTTCAGCGAGATGCTGCTTT...ATCTGTGTTGTCTGCCTTTGAGTGTGAGTGCAAAATAGCTGAATTAGAAAACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR GCA 90 bp | TCAATCTCAGTGTCAACTCCACCATCAGTGAAACTTCAAAGAATCCACATACGAAAGGGTTTTTCTTATTaGCTGGTTGCTCCTCTAACT | + |
|
Preference number: 4 (lower is better) Translates to: SISVSTPPSVKLQRIHIRKGFSY*LVAPLT Trigger: AGTTAGAGGAGCAACCAGGCAATAAGAAAAACCCTT...TCGTATGTGGATTCTTTGAAGTTTCACTGATGGTGGAGTTGACACTGAGATTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| 3UTR CAA 72 bp | CAGACTTCTTTTCTCGTGTTTTCTAATTCAGCTATTTaGCACTCACACTCAAAGGCAGACAACACAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: QTSFLVFSNSAI*HSHSKADNTDP Trigger: AGGATCTGTGTTGTCTGCCTTTGAGTGTGAGTGCAAAATAGCTGAATTAGAAAACACGAGAAAAGAAGTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS GCA 90 bp | TGGCGGGCTCGGTTGAATCCCAGTTGTTTGAACAGAACTGAGTACTaGTGTAAGTGGGGCTTTCCCCCTCCGGCGGCAACTCCAGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: WRARLNPSCLNRTEY*CKWGFPPPAATPGF Trigger: GAAACCTGGAGTTGCCGCCGGAGGGGGAAAGCCCCACTTACAGCAGTACTCAGTTCTGTTCAAACAACTGGGATTCAACCGAGCCCGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS CCA 90 bp | CGGTTGAATCCCAGTTGTTTGAACAGAACTGAGTACTGCTGTAAGTaGGGCTTTCCCCCTCCGGCGGCAACTCCAGGTTTCCTACGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RLNPSCLNRTEYCCK*GFPPPAATPGFLRN Trigger: ATTTCGTAGGAAACCTGGAGTTGCCGCCGGAGGGGGAAAGCCCCACTTACAGCAGTACTCAGTTCTGTTCAAACAACTGGGATTCAACCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR CAA 90 bp | TTTAGTGAAATGACCCTGAAGCAGCTGTGCGTTACCCACGCAGACTTCTTTTCTGCGATGACCTTTGGCTaGGAAAACAGGATCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSEMTLKQLCVTHADFFSAMTFG*ENRIPS Trigger: GCTGGGGATCCTGTTTTCCAAGCCAAAGGTCATCGC...AGAAAAGAAGTCTGCGTGGGTAACGCACAGCTGCTTCAGGGTCATTTCACTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
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| CDS TCA 90 bp | GAAACTATGGGCTCAAACAAGCTCTTCCATCCGAGGTACACACCTTaGAACATCCCACTTTCCACCATCGGGAAGTCTTCTGCTTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ETMGSNKLFHPRYTP*NIPLSTIGKSSACS Trigger: AGAACAAGCAGAAGACTTCCCGATGGTGGAAAGTGGGATGTTTCAAGGTGTGTACCTCGGATGGAAGAGCTTGTTTGAGCCCATAGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
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| CDS-3UTR CAA 90 bp | TTTAGTGAAATGACCCTGAAGCAGCTGTGCGTTACCCACGCAGACTTCTTTTCTTCCGAGGTACACACCTaGAAACATCCCACTTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FSEMTLKQLCVTHADFFSSEVHT*KHPTFH Trigger: GTGGAAAGTGGGATGTTTCAAGGTGTGTACCTCGGA...AGAAAAGAAGTCTGCGTGGGTAACGCACAGCTGCTTCAGGGTCATTTCACTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
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| CDS-3UTR CAA 90 bp | CAGCTATTTTGCACTCACACTCAAAGGCAGACAACACAGATCCTAGACTGGTCTTCCGAGGTACACACCTaGAAACATCCCACTTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QLFCTHTQRQTTQILDWSSEVHT*KHPTFH Trigger: GTGGAAAGTGGGATGTTTCAAGGTGTGTACCTCGGA...AGACCAGTCTAGGATCTGTGTTGTCTGCCTTTGAGTGTGAGTGCAAAATAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR CAA 90 bp | AATTCAGCTATTTTGCACTCACACTCAAAGGCAGACAACACAGATCCTAGACTGTGGAAAGCCTCGCTCTaGTCTACAGCCTCTTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: NSAILHSHSKADNTDPRLWKASL*STASSD Trigger: GTCAGAAGAGGCTGTAGACAAGAGCGAGGCTTTCCA...CAGTCTAGGATCTGTGTTGTCTGCCTTTGAGTGTGAGTGCAAAATAGCTGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR CAA 90 bp | AGTTTTCCCAACACTCACAAGTTTATACTGCATCACAAATGCCTGATGTTTGCTGCGATGACCTTTGGCTaGGAAAACAGGATCCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SFPNTHKFILHHKCLMFAAMTFG*ENRIPS Trigger: GCTGGGGATCCTGTTTTCCAAGCCAAAGGTCATCGC...AGCAAACATCAGGCATTTGTGATGCAGTATAAACTTGTGAGTGTTGGGAAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
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| CDS-3UTR CAA 90 bp | CTTTCAATCTCAGTGTCAACTCCACCATCAGTGAAACTTCAAAGAATCCACATATGGAAAGCCTCGCTCTaGTCTACAGCCTCTTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSISVSTPPSVKLQRIHIWKASL*STASSD Trigger: GTCAGAAGAGGCTGTAGACAAGAGCGAGGCTTTCCA...TATGTGGATTCTTTGAAGTTTCACTGATGGTGGAGTTGACACTGAGATTGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR CAA 90 bp | GTGTTTTCTAATTCAGCTATTTTGCACTCACACTCAAAGGCAGACAACACAGATTGGAAAGCCTCGCTCTaGTCTACAGCCTCTTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VFSNSAILHSHSKADNTDWKASL*STASSD Trigger: GTCAGAAGAGGCTGTAGACAAGAGCGAGGCTTTCCA...ATCTGTGTTGTCTGCCTTTGAGTGTGAGTGCAAAATAGCTGAATTAGAAAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR CAA 90 bp | GTGTCAACTCCACCATCAGTGAAACTTCAAAGAATCCACATACGATGTAACATTTCCGAGGTACACACCTaGAAACATCCCACTTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VSTPPSVKLQRIHIRCNISEVHT*KHPTFH Trigger: GTGGAAAGTGGGATGTTTCAAGGTGTGTACCTCGGA...AATGTTACATCGTATGTGGATTCTTTGAAGTTTCACTGATGGTGGAGTTGACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR CAA 90 bp | AATTCAGCTATTTTGCACTCACACTCAAAGGCAGACAACACAGATCCTAGACTGAATAAGGGCCGAGCTTaGATTGAAGGCTTTTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: NSAILHSHSKADNTDPRLNKGRA*IEGFFT Trigger: TGTGAAAAAGCCTTCAATCAAAGCTCGGCCCTTATT...CAGTCTAGGATCTGTGTTGTCTGCCTTTGAGTGTGAGTGCAAAATAGCTGAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS-3UTR CAA 90 bp | AGTTTTCCCAACACTCACAAGTTTATACTGCATCACAAATGCCTGATGTTTGCTAATAAGGGCCGAGCTTaGATTGAAGGCTTTTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: SFPNTHKFILHHKCLMFANKGRA*IEGFFT Trigger: TGTGAAAAAGCCTTCAATCAAAGCTCGGCCCTTATT...AGCAAACATCAGGCATTTGTGATGCAGTATAAACTTGTGAGTGTTGGGAAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS TCA 72 bp | CTCCCCCGTGTGGATCCTGTGGTGGATGTTAAGCCGTaGGAGCCAGGAAAAGGCCTTTCCGCATTCGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: LPRVDPVVDVKP*EPGKGLSAFGT Trigger: TGTGCCGAATGCGGAAAGGCCTTTTCCTGGCTCTCACGGCTTAACATCCACCACAGGATCCACACGGGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS CCA 72 bp | CCCAGTTGTTTGAACAGAACTGAGTACTGCTGTAAGTaGGGCTTTCCCCCTCCGGCGGCAACTCCAGGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSCLNRTEYCCK*GFPPPAATPGF Trigger: GAAACCTGGAGTTGCCGCCGGAGGGGGAAAGCCCCACTTACAGCAGTACTCAGTTCTGTTCAAACAACTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS GCA 72 bp | CGGTTGAATCCCAGTTGTTTGAACAGAACTGAGTACTaGTGTAAGTGGGGCTTTCCCCCTCCGGCGGCAACT | + |
|
Preference number: 6 (lower is better) Translates to: RLNPSCLNRTEY*CKWGFPPPAAT Trigger: AGTTGCCGCCGGAGGGGGAAAGCCCCACTTACAGCAGTACTCAGTTCTGTTCAAACAACTGGGATTCAACCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS CAA 72 bp | ATTTCTCACGAGTCCGACCCCTGGAAAGCCTCGCTCTaGTCTACAGCCTCTTCTGACAGAAAGCAGCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: ISHESDPWKASL*STASSDRKQHL Trigger: GAGATGCTGCTTTCTGTCAGAAGAGGCTGTAGACAAGAGCGAGGCTTTCCAGGGGTCGGACTCGTGAGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS TCA 72 bp | CCATCGGGAAGTCTTCTGCTTGTTCTAACTGAGCGATaGCCTTTGGCTTGGAAAACAGGATCCCCAGCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PSGSLLLVLTER*PLAWKTGSPAR Trigger: TCTCGCTGGGGATCCTGTTTTCCAAGCCAAAGGTCATCGCTCAGTTAGAACAAGCAGAAGACTTCCCGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
||
| CDS CAA 72 bp | GGGCTCAAACAAGCTCTTCCATCCGAGGTACACACCTaGAAACATCCCACTTTCCACCATCGGGAAGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GLKQALPSEVHT*KHPTFHHREVF Trigger: GAAGACTTCCCGATGGTGGAAAGTGGGATGTTTCAAGGTGTGTACCTCGGATGGAAGAGCTTGTTTGAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
||
| CDS CAA 90 bp | TGCTTGCTCAGGGAGGAACTGTGGAAGAAGACTTTCCCACAGATGTaGCATTTACAAAGCTGGCGGGCTCGGTTGAATCCCAGTTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: CLLREELWKKTFPQM*HLQSWRARLNPSCL Trigger: CAAACAACTGGGATTCAACCGAGCCCGCCAGCTTTGTAAATGCAACATCTGTGGGAAAGTCTTCTTCCACAGTTCCTCCCTGAGCAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
||
| CDS TCA 72 bp | GGCTCAAACAAGCTCTTCCATCCGAGGTACACACCTTaGAACATCCCACTTTCCACCATCGGGAAGTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSNKLFHPRYTP*NIPLSTIGKSS Trigger: AGAAGACTTCCCGATGGTGGAAAGTGGGATGTTTCAAGGTGTGTACCTCGGATGGAAGAGCTTGTTTGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
||
| CDS CAA 90 bp | GGAAACTATGGGCTCAAACAAGCTCTTCCATCCGAGGTACACACCTaGAAACATCCCACTTTCCACCATCGGGAAGTCTTCTGCTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GNYGLKQALPSEVHT*KHPTFHHREVFCLF Trigger: GAACAAGCAGAAGACTTCCCGATGGTGGAAAGTGGGATGTTTCAAGGTGTGTACCTCGGATGGAAGAGCTTGTTTGAGCCCATAGTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049625.2 ENSMUST00000109134.8 |
||
| CDS CAA 72 bp | CCACAGATGTTGCATTTACAAAGCTGGCGGGCTCGGTaGAATCCCAGTTGTTTGAACAGAACTGAGTACTGC | + |
|
Preference number: 6 (lower is better) Translates to: PQMLHLQSWRAR*NPSCLNRTEYC Trigger: GCAGTACTCAGTTCTGTTCAAACAACTGGGATTCAACCGAGCCCGCCAGCTTTGTAAATGCAACATCTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
||
| CDS CAA 90 bp | AAGACTTTCCCACAGATGTTGCATTTACAAAGCTGGCGGGCTCGGTaGAATCCCAGTTGTTTGAACAGAACTGAGTACTGCTGTAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: KTFPQMLHLQSWRAR*NPSCLNRTEYCCKW Trigger: CCACTTACAGCAGTACTCAGTTCTGTTCAAACAACTGGGATTCAACCGAGCCCGCCAGCTTTGTAAATGCAACATCTGTGGGAAAGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS CAA 90 bp | CCTCTTCTGACAGAAAGCAGCATCTCGCTGAAAGGGTTTTTCTTATaGCCTGGTTGCTCCTCTAACTGTTCCTCATTTACACACGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: PLLTESSISLKGFFL*PGCSSNCSSFTHVF Trigger: AAAAACGTGTGTAAATGAGGAACAGTTAGAGGAGCAACCAGGCAATAAGAAAAACCCTTTCAGCGAGATGCTGCTTTCTGTCAGAAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS CAA 72 bp | ACAGAAAGCAGCATCTCGCTGAAAGGGTTTTTCTTATaGCCTGGTTGCTCCTCTAACTGTTCCTCATTTACA | + |
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Preference number: 6 (lower is better) Translates to: TESSISLKGFFL*PGCSSNCSSFT Trigger: TGTAAATGAGGAACAGTTAGAGGAGCAACCAGGCAATAAGAAAAACCCTTTCAGCGAGATGCTGCTTTCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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| CDS GCA 72 bp | AGCATCTCGCTGAAAGGGTTTTTCTTATTGCCTGGTTaGTCCTCTAACTGTTCCTCATTTACACACGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: SISLKGFFLLPG*SSNCSSFTHVF Trigger: AAAAACGTGTGTAAATGAGGAACAGTTAGAGGAGCAACCAGGCAATAAGAAAAACCCTTTCAGCGAGATGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000049625.2 ENSMUST00000109133.2 ENSMUST00000109134.8 |
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