Pregenerated sensors for ZFP874B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059839Ensembl transcript IDs: ENSMUST00000019572.9, ENSMUST00000223868.2
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACTTGGCAACCAGGATGTCAGTTACCCACATGCATGTCTCTTTCTaGCAAGTAAGATGTCAGTTCCTCGGGAGGTCTTGGGAATGTAAA | + |
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Preference number: 1 (lower is better) Translates to: NLATRMSVTHMHVSF*QVRCQFLGRSWECK Trigger: TTTACATTCCCAAGACCTCCCGAGGAACTGACATCTTACTTGGCAGAAAGAGACATGCATGTGGGTAACTGACATCCTGGTTGCCAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR CCA 90 bp | TCACTGTGTCAGGGACTTACTTGGTCTAACATTCATGTCTTAACTTaGCAACCAGGATGTCAGTTACCCACATGCATGTCTCTTTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: SLCQGLTWSNIHVLT*QPGCQLPTCMSLSA Trigger: GGCAGAAAGAGACATGCATGTGGGTAACTGACATCCTGGTTGCCAAGTTAAGACATGAATGTTAGACCAAGTAAGTCCCTGACACAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR TCA 90 bp | GCAGGGACTGCCTTCACAATGAATTGTTTGATGTTGTCTAAGGGCTaGAGAAAACGAAAACCATCTGCCATACTCTTCACACTTGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: AGTAFTMNCLMLSKG*RKRKPSAILFTLGG Trigger: ACCTCCAAGTGTGAAGAGTATGGCAGATGGTTTTCGTTTTCTTCAGCCCTTAGACAACATCAAACAATTCATTGTGAAGGCAGTCCCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR TCA 90 bp | CCTACAAAACCCATGAGAGACATTACAGGTGCTTGCATGTCTCCATaGAGAAAACAACAAAGTATACCATGGCCCAGTACTCAGATTCAG | + |
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Preference number: 1 (lower is better) Translates to: PTKPMRDITGACMSP*RKQQSIPWPSTQIQ Trigger: CTGAATCTGAGTACTGGGCCATGGTATACTTTGTTGTTTTCTTCATGGAGACATGCAAGCACCTGTAATGTCTCTCATGGGTTTTGTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR CCA 90 bp | CATCAGCCACAGCTGCAGTCCAGATTTGGGAAATTAACCATGACATaGAGTTTGGATCTTACAGGGATTTTAAAGCCCCAAATCCACAAA | + |
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Preference number: 1 (lower is better) Translates to: HQPQLQSRFGKLTMT*SLDLTGILKPQIHK Trigger: TTTGTGGATTTGGGGCTTTAAAATCCCTGTAAGATCCAAACTCCATGTCATGGTTAATTTCCCAAATCTGGACTGCAGCTGTGGCTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR TCA 90 bp | CTTAGGAATATGTCTTTGTTGTGCACTTACCCTGTTCCCATTGGTTaGAGTATTTCACTGTGTCAGGGACTTACTTGGTCTAACATTCAT | + |
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Preference number: 1 (lower is better) Translates to: LRNMSLLCTYPVPIG*SISLCQGLTWSNIH Trigger: ATGAATGTTAGACCAAGTAAGTCCCTGACACAGTGAAATACTTCAACCAATGGGAACAGGGTAAGTGCACAACAAAGACATATTCCTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR CCA 90 bp | CAGCTTATACCACAAAAACCTATACACAGGTACAGGAAGTACTGTTaGATGGTTGGTTTGGATCTAAGATTATTGTGGGTAAGTATGCAA | + |
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Preference number: 1 (lower is better) Translates to: QLIPQKPIHRYRKYC*MVGLDLRLLWVSMQ Trigger: TTGCATACTTACCCACAATAATCTTAGATCCAAACCAACCATCCAACAGTACTTCCTGTACCTGTGTATAGGTTTTTGTGGTATAAGCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR CCA 90 bp | CATGTCTCTTTCTGCCAAGTAAGATGTCAGTTCCTCGGGAGGTCTTaGGAATGTAAATGTTACTCAAGTATGATTCAAAATAGAACTCTT | + |
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Preference number: 1 (lower is better) Translates to: HVSFCQVRCQFLGRS*ECKCYSSMIQNRTL Trigger: AAGAGTTCTATTTTGAATCATACTTGAGTAACATTTACATTCCCAAGACCTCCCGAGGAACTGACATCTTACTTGGCAGAAAGAGACATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR-3UTR CCA 90 bp | CACCCCAGGACCCCATCAGCCACAGCTGCAGTCCAGATTTGGGAAATTAACCATTTCTGTAGACCAGGCTaGCCTCGAACTCAGAAATTC | + |
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Preference number: 2 (lower is better) Translates to: HPRTPSATAAVQIWEINHFCRPG*PRTQKF Trigger: GAATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAA...ATGGTTAATTTCCCAAATCTGGACTGCAGCTGTGGCTGATGGGGTCCTGGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGGGTTTACTGGGAAGACAAACACTAGTTCTCATTTACCTCAGGCTGGGTGGGCCTGGTATACAAAGTaGGTTCCAGGACAGTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LGFTGKTNTSSHLPQAGWAWYTK*VPGQSG Trigger: CCCTGACTGTCCTGGAACTCACTTTGTATACCAGGC...CCACCCAGCCTGAGGTAAATGAGAACTAGTGTTTGTCTTCCCAGTAAACCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR-3UTR CCA 90 bp | GACAGTTTATTGAGCATACACCCCAGGACCCCATCAGCCACAGCTGCAGTCCAGGACAATCTCTTCTTTTaGGGTTTACTGGGAAGACAA | + |
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Preference number: 2 (lower is better) Translates to: DSLLSIHPRTPSATAAVQDNLFF*GLLGRQ Trigger: TTGTCTTCCCAGTAAACCCCAAAAGAAGAGATTGTC...CTGGACTGCAGCTGTGGCTGATGGGGTCCTGGGGTGTATGCTCAATAAACTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR-3UTR CCA 90 bp | GGATCTTACAGGGATTTTAAAGCCCCAAATCCACAAACATCTGTGTCAAGTTATTCATTTACCTCAGGCTaGGTGGGACCAAAGCGGATC | + |
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Preference number: 2 (lower is better) Translates to: GSYRDFKAPNPQTSVSSYSFTSG*VGPKRI Trigger: GATCCGCTTTGGTCCCACCCAGCCTGAGGTAAATGA...ATAACTTGACACAGATGTTTGTGGATTTGGGGCTTTAAAATCCCTGTAAGATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR CAA 90 bp | GTTTATGGAGCTTCCTACAAAACCCATGAGAGACATTACAGGTGCTaGCATGTCTCCATGAAGAAAACAACAAAGTATACCATGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: VYGASYKTHERHYRC*HVSMKKTTKYTMAQ Trigger: CTGGGCCATGGTATACTTTGTTGTTTTCTTCATGGAGACATGCAAGCACCTGTAATGTCTCTCATGGGTTTTGTAGGAAGCTCCATAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR CAA 90 bp | CCACAGCTGCAGTCCAGATTTGGGAAATTAACCATGACATGGAGTTaGGATCTTACAGGGATTTTAAAGCCCCAAATCCACAAACATCTG | + |
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Preference number: 2 (lower is better) Translates to: PQLQSRFGKLTMTWS*DLTGILKPQIHKHL Trigger: CAGATGTTTGTGGATTTGGGGCTTTAAAATCCCTGTAAGATCCAAACTCCATGTCATGGTTAATTTCCCAAATCTGGACTGCAGCTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR-3UTR GCA 90 bp | ACCCATGAGAGACATTACAGGTGCTTGCATGTCTCCATGAAGAAAACAACAAAGCCATGCCTGACTCCATaGTTTCTCTTAACACTGAGT | + |
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Preference number: 2 (lower is better) Translates to: THERHYRCLHVSMKKTTKPCLTP*FLLTLS Trigger: ACTCAGTGTTAAGAGAAAGCATGGAGTCAGGCATGG...CTTTGTTGTTTTCTTCATGGAGACATGCAAGCACCTGTAATGTCTCTCATGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR-3UTR TCA 90 bp | AAACTTGTGTTCTGTAAGAGTAGACAGTGTAGAAAAGGCTCTGTGACATTCCCCGTTTTCTCTTCAGTATaGACAGCCTTGTGTCTCCTA | + |
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Preference number: 2 (lower is better) Translates to: KLVFCKSRQCRKGSVTFPVFSSV*TALCLL Trigger: TAGGAGACACAAGGCTGTTCATACTGAAGAGAAAAC...GGGGAATGTCACAGAGCCTTTTCTACACTGTCTACTCTTACAGAACACAAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR CAA 90 bp | GTTTCCTTAGGAATATGTCTTTGTTGTGCACTTACCCTGTTCCCATaGGTTGAAGTATTTCACTGTGTCAGGGACTTACTTGGTCTAACA | + |
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Preference number: 2 (lower is better) Translates to: VSLGICLCCALTLFP*VEVFHCVRDLLGLT Trigger: TGTTAGACCAAGTAAGTCCCTGACACAGTGAAATACTTCAACCAATGGGAACAGGGTAAGTGCACAACAAAGACATATTCCTAAGGAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR CAA 90 bp | GCAGCTTATACCACAAAAACCTATACACAGGTACAGGAAGTACTGTaGGATGGTTGGTTTGGATCTAAGATTATTGTGGGTAAGTATGCA | + |
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Preference number: 2 (lower is better) Translates to: AAYTTKTYTQVQEVL*DGWFGSKIIVGKYA Trigger: TGCATACTTACCCACAATAATCTTAGATCCAAACCAACCATCCAACAGTACTTCCTGTACCTGTGTATAGGTTTTTGTGGTATAAGCTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR-3UTR TCA 90 bp | ACCCATGAGAGACATTACAGGTGCTTGCATGTCTCCATGAAGAAAACAACAAAGGGCTTTTGTCCAGTGTaGATATTTTGGAATTTAAGC | + |
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Preference number: 2 (lower is better) Translates to: THERHYRCLHVSMKKTTKGFCPV*IFWNLS Trigger: GCTTAAATTCCAAAATATTCACACTGGACAAAAGCC...CTTTGTTGTTTTCTTCATGGAGACATGCAAGCACCTGTAATGTCTCTCATGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR-3UTR TCA 90 bp | AAACATCTGTGTCAAGTTATTTTACCTTTAGGAATTAGGGATAGGGGGTTTCCTGGAACCAAACACAACTaGCAATCTCTTCTTTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: KHLCQVILPLGIRDRGFPGTKHN*QSLLLG Trigger: CCCCAAAAGAAGAGATTGTCAGTTGTGTTTGGTTCC...AGGAAACCCCCTATCCCTAATTCCTAAAGGTAAAATAACTTGACACAGATGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR CAA 90 bp | CAAAAACCTATACACAGGTACAGGAAGTACTGTTGGATGGTTGGTTaGGATCTAAGATTATTGTGGGTAAGTATGCAAACAGTTCCACTA | + |
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Preference number: 2 (lower is better) Translates to: QKPIHRYRKYCWMVG*DLRLLWVSMQTVPL Trigger: TAGTGGAACTGTTTGCATACTTACCCACAATAATCTTAGATCCAAACCAACCATCCAACAGTACTTCCTGTACCTGTGTATAGGTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR-3UTR TCA 90 bp | TTTCAAAATAATTACTGGGCACACAGGGGTAAAGAGACGCAAGGAGACATTCTTGATTTCACTCCAGTATaGCTCAACTTGTATCAAAAC | + |
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Preference number: 2 (lower is better) Translates to: FQNNYWAHRGKETQGDILDFTPV*LNLYQN Trigger: GTTTTGATACAAGTTGAGTCATACTGGAGTGAAATC...AAGAATGTCTCCTTGCGTCTCTTTACCCCTGTGTGCCCAGTAATTATTTTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR-3UTR CCA 90 bp | GGATCTTACAGGGATTTTAAAGCCCCAAATCCACAAACATCTGTGTCAAGTTATTTTCAAAATAATTACTaGGCACACAGGGGTAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: GSYRDFKAPNPQTSVSSYFQNNY*AHRGKE Trigger: CTCTTTACCCCTGTGTGCCCAGTAATTATTTTGAAA...ATAACTTGACACAGATGTTTGTGGATTTGGGGCTTTAAAATCCCTGTAAGATCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR GCA 72 bp | CCAGGCTGGCCTCGAACTCAGAAATTCACCTGCCTCTaGCTCCCAAGTACTGGGACTAAAGGTGTGCGCCAC | + |
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Preference number: 3 (lower is better) Translates to: PGWPRTQKFTCL*LPSTGTKGVRH Trigger: GTGGCGCACACCTTTAGTCCCAGTACTTGGGAGGCAGAGGCAGGTGAATTTCTGAGTTCGAGGCCAGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR-3UTR CAA 90 bp | TTGGGGTTTACTGGGAAGACAAACACTAGTTCTCATTTACCTCAGGCTGGGTGGGAGGCAGGCGGATTTTaGAGTTCGAGGCCAGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: LGFTGKTNTSSHLPQAGWEAGGF*SSRPAW Trigger: CCAGGCTGGCCTCGAACTCAAAAATCCGCCTGCCTC...CCACCCAGCCTGAGGTAAATGAGAACTAGTGTTTGTCTTCCCAGTAAACCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR-3UTR CAA 90 bp | CACCCCAGGACCCCATCAGCCACAGCTGCAGTCCAGATTTGGGAAATTAACCATTGTTGGATGGTTGGTTaGGATCTAAGATTATTGTGG | + |
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Preference number: 3 (lower is better) Translates to: HPRTPSATAAVQIWEINHCWMVG*DLRLLW Trigger: CCACAATAATCTTAGATCCAAACCAACCATCCAACA...ATGGTTAATTTCCCAAATCTGGACTGCAGCTGTGGCTGATGGGGTCCTGGGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR-3UTR CAA 90 bp | GCACTTACCCTGTTCCCATTGGTTGAAGTATTTCACTGTGTCAGGGACTTACTTTTTCTCTGTGTAGCCTaGGCTGTCCTGGAACTCATT | + |
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Preference number: 3 (lower is better) Translates to: ALTLFPLVEVFHCVRDLLFLCVA*AVLELI Trigger: AATGAGTTCCAGGACAGCCAAGGCTACACAGAGAAA...AAGTAAGTCCCTGACACAGTGAAATACTTCAACCAATGGGAACAGGGTAAGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR CCA 72 bp | AAGACAAACACTAGTTCTCATTTACCTCAGGCTGGGTaGGACCAAAGCGGATCATTTCATACGAGTCAAACT | + |
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Preference number: 3 (lower is better) Translates to: KTNTSSHLPQAG*DQSGSFHTSQT Trigger: AGTTTGACTCGTATGAAATGATCCGCTTTGGTCCCACCCAGCCTGAGGTAAATGAGAACTAGTGTTTGTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR-3UTR CAA 90 bp | GCACTTACCCTGTTCCCATTGGTTGAAGTATTTCACTGTGTCAGGGACTTACTTGTGACAGTCTTCGCATaGATATGGTTTCTTTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: ALTLFPLVEVFHCVRDLLVTVFA*IWFLSS Trigger: AGAGGAAAGAAACCATATCAATGCGAAGACTGTCAC...AAGTAAGTCCCTGACACAGTGAAATACTTCAACCAATGGGAACAGGGTAAGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR-3UTR CAA 90 bp | GCACTTACCCTGTTCCCATTGGTTGAAGTATTTCACTGTGTCAGGGACTTACTTAGACATTACAGGTGCTaGCATGTCTCCATGAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: ALTLFPLVEVFHCVRDLLRHYRC*HVSMKK Trigger: TTTCTTCATGGAGACATGCAAGCACCTGTAATGTCT...AAGTAAGTCCCTGACACAGTGAAATACTTCAACCAATGGGAACAGGGTAAGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR TCA 72 bp | ATGTCTTTGTTGTGCACTTACCCTGTTCCCATTGGTTaGAGTATTTCACTGTGTCAGGGACTTACTTGGTCT | + |
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Preference number: 3 (lower is better) Translates to: MSLLCTYPVPIG*SISLCQGLTWS Trigger: AGACCAAGTAAGTCCCTGACACAGTGAAATACTTCAACCAATGGGAACAGGGTAAGTGCACAACAAAGACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR CCA 72 bp | CAGCTGCAGTCCAGATTTGGGAAATTAACCATGACATaGAGTTTGGATCTTACAGGGATTTTAAAGCCCCAA | + |
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Preference number: 3 (lower is better) Translates to: QLQSRFGKLTMT*SLDLTGILKPQ Trigger: TTGGGGCTTTAAAATCCCTGTAAGATCCAAACTCCATGTCATGGTTAATTTCCCAAATCTGGACTGCAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR-3UTR CAA 90 bp | ACCCATGAGAGACATTACAGGTGCTTGCATGTCTCCATGAAGAAAACAACAAAGCAAGGCTTTCCCACATaGTTCCTACTTCAACAGTTT | + |
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Preference number: 3 (lower is better) Translates to: THERHYRCLHVSMKKTTKQGFPT*FLLQQF Trigger: AAACTGTTGAAGTAGGAACAATGTGGGAAAGCCTTG...CTTTGTTGTTTTCTTCATGGAGACATGCAAGCACCTGTAATGTCTCTCATGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR GCA 72 bp | GGAGCTTCCTACAAAACCCATGAGAGACATTACAGGTaGTTGCATGTCTCCATGAAGAAAACAACAAAGTAT | + |
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Preference number: 3 (lower is better) Translates to: GASYKTHERHYR*LHVSMKKTTKY Trigger: ATACTTTGTTGTTTTCTTCATGGAGACATGCAAGCACCTGTAATGTCTCTCATGGGTTTTGTAGGAAGCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR CCA 72 bp | GAATATGTCTTTGTTGTGCACTTACCCTGTTCCCATTaGTTGAAGTATTTCACTGTGTCAGGGACTTACTTG | + |
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Preference number: 3 (lower is better) Translates to: EYVFVVHLPCSH*LKYFTVSGTYL Trigger: CAAGTAAGTCCCTGACACAGTGAAATACTTCAACCAATGGGAACAGGGTAAGTGCACAACAAAGACATATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR-3UTR CAA 90 bp | ACCCATGAGAGACATTACAGGTGCTTGCATGTCTCCATGAAGAAAACAACAAAGTTCCTCTATGATTTTTaGATGTTCCAGAAGGCATGC | + |
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Preference number: 3 (lower is better) Translates to: THERHYRCLHVSMKKTTKFLYDF*MFQKAC Trigger: GCATGCCTTCTGGAACATCAAAAAATCATAGAGGAA...CTTTGTTGTTTTCTTCATGGAGACATGCAAGCACCTGTAATGTCTCTCATGGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR-3UTR CAA 90 bp | AAACATCTGTGTCAAGTTATTTTACCTTTAGGAATTAGGGATAGGGGGTTTCCTCCCTGTTCCCATTGGTaGAAGTATTTCACTGTGTCA | + |
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Preference number: 3 (lower is better) Translates to: KHLCQVILPLGIRDRGFPPCSHW*KYFTVS Trigger: TGACACAGTGAAATACTTCAACCAATGGGAACAGGG...AGGAAACCCCCTATCCCTAATTCCTAAAGGTAAAATAACTTGACACAGATGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR TCA 72 bp | GCCTTCACAATGAATTGTTTGATGTTGTCTAAGGGCTaGAGAAAACGAAAACCATCTGCCATACTCTTCACA | + |
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Preference number: 3 (lower is better) Translates to: AFTMNCLMLSKG*RKRKPSAILFT Trigger: TGTGAAGAGTATGGCAGATGGTTTTCGTTTTCTTCAGCCCTTAGACAACATCAAACAATTCATTGTGAAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR CCA 72 bp | ACCTATACACAGGTACAGGAAGTACTGTTGGATGGTTaGTTTGGATCTAAGATTATTGTGGGTAAGTATGCA | + |
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Preference number: 3 (lower is better) Translates to: TYTQVQEVLLDG*FGSKIIVGKYA Trigger: TGCATACTTACCCACAATAATCTTAGATCCAAACCAACCATCCAACAGTACTTCCTGTACCTGTGTATAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR TCA 72 bp | AAAAATATGAGTTTATGGAGCTTCCTACAAAACCCATaGGAGACATTACAGGTGCTTGCATGTCTCCATGAA | + |
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Preference number: 3 (lower is better) Translates to: KNMSLWSFLQNP*ETLQVLACLHE Trigger: TTCATGGAGACATGCAAGCACCTGTAATGTCTCTCATGGGTTTTGTAGGAAGCTCCATAAACTCATATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR TCA 72 bp | AGATCAGAGATTCTTTATTCTGGAACCAAACACAACTaGCAATCTCTTCTTTTGGGGTTTACTGGGAAGACA | + |
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Preference number: 3 (lower is better) Translates to: RSEILYSGTKHN*QSLLLGFTGKT Trigger: TGTCTTCCCAGTAAACCCCAAAAGAAGAGATTGTCAGTTGTGTTTGGTTCCAGAATAAAGAATCTCTGATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR TCA 72 bp | CCACATTGTTCCTACTTCAACAGTTTCTCTAGAGAATaGACAAACTTGTGTTCTGTAAGAGTAGACAGTGTA | + |
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Preference number: 3 (lower is better) Translates to: PHCSYFNSFSRE*TNLCSVRVDSV Trigger: TACACTGTCTACTCTTACAGAACACAAGTTTGTTCATTCTCTAGAGAAACTGTTGAAGTAGGAACAATGTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| CDS-3UTR GCA 90 bp | GACAGTTTATTGAGCATACACCCCAGGACCCCATCAGCCACAGCTGCAGTCCAGAACGGGAAAACCCTTTaGCACATTCTTCGCACTTGT | + |
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Preference number: 4 (lower is better) Translates to: DSLLSIHPRTPSATAAVQNGKTL*HILRTC Trigger: ACAAGTGCGAAGAATGTGGCAAAGGGTTTTCCCGTT...CTGGACTGCAGCTGTGGCTGATGGGGTCCTGGGGTGTATGCTCAATAAACTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| CDS-3UTR GCA 90 bp | GCACTTACCCTGTTCCCATTGGTTGAAGTATTTCACTGTGTCAGGGACTTACTTTCCTGGGATGGTGGCTaGTGCGTGGCTTTTCACACC | + |
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Preference number: 4 (lower is better) Translates to: ALTLFPLVEVFHCVRDLLSWDGG*CVAFHT Trigger: GGTGTGAAAAGCCACGCAGCAGCCACCATCCCAGGA...AAGTAAGTCCCTGACACAGTGAAATACTTCAACCAATGGGAACAGGGTAAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| CDS-3UTR CCA 90 bp | GACAGTTTATTGAGCATACACCCCAGGACCCCATCAGCCACAGCTGCAGTCCAGCATTCTACACACTCATaGGGAGTATCTTCAGAATGG | + |
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Preference number: 4 (lower is better) Translates to: DSLLSIHPRTPSATAAVQHSTHS*GVSSEW Trigger: CCATTCTGAAGATACTCCCCATGAGTGTGTAGAATG...CTGGACTGCAGCTGTGGCTGATGGGGTCCTGGGGTGTATGCTCAATAAACTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| CDS-3UTR CCA 90 bp | TGTGACATTCCCCACACTTGCAGGGACTGCCTTCACAATGAATTGTTTGATGTTATTGCCTGTTGTTCCTaGGATGGTGGCTGCTGCGTG | + |
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Preference number: 4 (lower is better) Translates to: CDIPHTCRDCLHNELFDVIACCS*DGGCCV Trigger: CACGCAGCAGCCACCATCCCAGGAACAACAGGCAAT...AACATCAAACAATTCATTGTGAAGGCAGTCCCTGCAAGTGTGGGGAATGTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| CDS-3UTR CCA 90 bp | GACAGTTTATTGAGCATACACCCCAGGACCCCATCAGCCACAGCTGCAGTCCAGTCAATTCCTTTATGCTaGTTAAGAAAGAAAGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: DSLLSIHPRTPSATAAVQSIPLC*LRKKAE Trigger: CTCTGCTTTCTTTCTTAACCAGCATAAAGGAATTGA...CTGGACTGCAGCTGTGGCTGATGGGGTCCTGGGGTGTATGCTCAATAAACTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| CDS-3UTR GCA 90 bp | TTGGGGTTTACTGGGAAGACAAACACTAGTTCTCATTTACCTCAGGCTGGGTGGGAAGACCCTTGGTTTTaGTCCAGAAATGTTACCAAG | + |
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Preference number: 4 (lower is better) Translates to: LGFTGKTNTSSHLPQAGWEDPWF*SRNVTK Trigger: CTTGGTAACATTTCTGGAGCAAAACCAAGGGTCTTC...CCACCCAGCCTGAGGTAAATGAGAACTAGTGTTTGTCTTCCCAGTAAACCCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| CDS-3UTR TCA 90 bp | TGTGACATTCCCCACACTTGCAGGGACTGCCTTCACAATGAATTGTTTGATGTTATGATGCTGAAGATGTaGGGAACGCAAAAACCGTTT | + |
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Preference number: 4 (lower is better) Translates to: CDIPHTCRDCLHNELFDVMMLKM*GTQKPF Trigger: AAACGGTTTTTGCGTTCCTCACATCTTCAGCATCAT...AACATCAAACAATTCATTGTGAAGGCAGTCCCTGCAAGTGTGGGGAATGTCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| CDS-3UTR CCA 90 bp | AAACTTGTGTTCTGTAAGAGTAGACAGTGTAGAAAAGGCTCTGTGACATTCCCCGTAGTCCCTCTCTTCTaGAGAAAAATCAATGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: KLVFCKSRQCRKGSVTFPVVPLF*RKINGH Trigger: GTGGCCATTGATTTTTCTCCAGAAGAGAGGGACTAC...GGGGAATGTCACAGAGCCTTTTCTACACTGTCTACTCTTACAGAACACAAGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR CAA 72 bp | TATGTCTTTGTTGTGCACTTACCCTGTTCCCATTGGTaGAAGTATTTCACTGTGTCAGGGACTTACTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: YVFVVHLPCSHW*KYFTVSGTYLV Trigger: GACCAAGTAAGTCCCTGACACAGTGAAATACTTCAACCAATGGGAACAGGGTAAGTGCACAACAAAGACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| CDS-3UTR CCA 90 bp | TGTGACATTCCCCACACTTGCAGGGACTGCCTTCACAATGAATTGTTTGATGTTAAATGTTACCAAGTATaGCTTAGCAACAGCAAGACC | + |
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Preference number: 4 (lower is better) Translates to: CDIPHTCRDCLHNELFDVKCYQV*LSNSKT Trigger: GGTCTTGCTGTTGCTAAGCCATACTTGGTAACATTT...AACATCAAACAATTCATTGTGAAGGCAGTCCCTGCAAGTGTGGGGAATGTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR CAA 72 bp | GGAATATGTCTTTGTTGTGCACTTACCCTGTTCCCATaGGTTGAAGTATTTCACTGTGTCAGGGACTTACTT | + |
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Preference number: 4 (lower is better) Translates to: GICLCCALTLFP*VEVFHCVRDLL Trigger: AAGTAAGTCCCTGACACAGTGAAATACTTCAACCAATGGGAACAGGGTAAGTGCACAACAAAGACATATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR CAA 72 bp | CAGTCCAGATTTGGGAAATTAACCATGACATGGAGTTaGGATCTTACAGGGATTTTAAAGCCCCAAATCCAC | + |
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Preference number: 4 (lower is better) Translates to: QSRFGKLTMTWS*DLTGILKPQIH Trigger: GTGGATTTGGGGCTTTAAAATCCCTGTAAGATCCAAACTCCATGTCATGGTTAATTTCCCAAATCTGGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| CDS-3UTR TCA 90 bp | GCACTTACCCTGTTCCCATTGGTTGAAGTATTTCACTGTGTCAGGGACTTACTTGTGTTTCCTAAGATATaGGTGATGAAGAAAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: ALTLFPLVEVFHCVRDLLVFPKI*VMKKGF Trigger: AAAGCCTTTCTTCATCACTCATATCTTAGGAAACAC...AAGTAAGTCCCTGACACAGTGAAATACTTCAACCAATGGGAACAGGGTAAGTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| CDS-3UTR TCA 90 bp | AAACTTGTGTTCTGTAAGAGTAGACAGTGTAGAAAAGGCTCTGTGACATTCCCCTCAATGGCCTCATTGTaGTTGTTAAATTCATTGCCT | + |
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Preference number: 4 (lower is better) Translates to: KLVFCKSRQCRKGSVTFPSMASL*LLNSLP Trigger: AGGCAATGAATTTAACAATCACAATGAGGCCATTGA...GGGGAATGTCACAGAGCCTTTTCTACACTGTCTACTCTTACAGAACACAAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| CDS-3UTR TCA 90 bp | ACAGCTGCAGTCCAGATTTGGGAAATTAACCATGACATGGAGTTTGGATCTTACTGCAGGATAGTAAAATaGATTTCCACACTCTTCACA | + |
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Preference number: 4 (lower is better) Translates to: TAAVQIWEINHDMEFGSYCRIVK*ISTLFT Trigger: TGTGAAGAGTGTGGAAATTCATTTTACTATCCTGCA...GTAAGATCCAAACTCCATGTCATGGTTAATTTCCCAAATCTGGACTGCAGCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| CDS-3UTR TCA 90 bp | AAACTTGTGTTCTGTAAGAGTAGACAGTGTAGAAAAGGCTCTGTGACATTCCCCTCAGAATGGATGATTTaGTGTCTTTTAAGGGACGTA | + |
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Preference number: 4 (lower is better) Translates to: KLVFCKSRQCRKGSVTFPSEWMI*CLLRDV Trigger: TACGTCCCTTAAAAGACATCAAATCATCCATTCTGA...GGGGAATGTCACAGAGCCTTTTCTACACTGTCTACTCTTACAGAACACAAGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR CAA 72 bp | ACCACAAAAACCTATACACAGGTACAGGAAGTACTGTaGGATGGTTGGTTTGGATCTAAGATTATTGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: TTKTYTQVQEVL*DGWFGSKIIVG Trigger: ACCCACAATAATCTTAGATCCAAACCAACCATCCAACAGTACTTCCTGTACCTGTGTATAGGTTTTTGTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR CAA 72 bp | ATACACAGGTACAGGAAGTACTGTTGGATGGTTGGTTaGGATCTAAGATTATTGTGGGTAAGTATGCAAACA | + |
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Preference number: 4 (lower is better) Translates to: IHRYRKYCWMVG*DLRLLWVSMQT Trigger: TGTTTGCATACTTACCCACAATAATCTTAGATCCAAACCAACCATCCAACAGTACTTCCTGTACCTGTGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| 3UTR CAA 72 bp | AAGTACTGTTGGATGGTTGGTTTGGATCTAAGATTATaGTGGGTAAGTATGCAAACAGTTCCACTATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KYCWMVGLDLRL*WVSMQTVPLSS Trigger: AGAAGATAGTGGAACTGTTTGCATACTTACCCACAATAATCTTAGATCCAAACCAACCATCCAACAGTACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| CDS-3UTR CAA 90 bp | GACAGTTTATTGAGCATACACCCCAGGACCCCATCAGCCACAGCTGCAGTCCAGATGAATTCTTTGATGTaGCTTCAGCATTGCAGGATA | + |
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Preference number: 5 (lower is better) Translates to: DSLLSIHPRTPSATAAVQMNSLM*LQHCRI Trigger: TATCCTGCAATGCTGAAGCAACATCAAAGAATTCAT...CTGGACTGCAGCTGTGGCTGATGGGGTCCTGGGGTGTATGCTCAATAAACTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| CDS-3UTR CAA 90 bp | GCACTTACCCTGTTCCCATTGGTTGAAGTATTTCACTGTGTCAGGGACTTACTTGATGTTCCTGAAGCTTaGAGGAACGGGAAAACCCTT | + |
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Preference number: 5 (lower is better) Translates to: ALTLFPLVEVFHCVRDLLDVPEA*RNGKTL Trigger: AAGGGTTTTCCCGTTCCTCAAAGCTTCAGGAACATC...AAGTAAGTCCCTGACACAGTGAAATACTTCAACCAATGGGAACAGGGTAAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| CDS-3UTR CAA 90 bp | TTGGGGTTTACTGGGAAGACAAACACTAGTTCTCATTTACCTCAGGCTGGGTGGGATGTTGCTTCAGCATaGCAGGATAGTAAAATGAAT | + |
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Preference number: 5 (lower is better) Translates to: LGFTGKTNTSSHLPQAGWDVASA*QDSKMN Trigger: ATTCATTTTACTATCCTGCAATGCTGAAGCAACATC...CCACCCAGCCTGAGGTAAATGAGAACTAGTGTTTGTCTTCCCAGTAAACCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| CDS-3UTR CAA 90 bp | ACCCATGAGAGACATTACAGGTGCTTGCATGTCTCCATGAAGAAAACAACAAAGTGTCTACAGAATGAATaGTTTGATGTCTTTTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: THERHYRCLHVSMKKTTKCLQNE*FDVFSG Trigger: CCCTGAAAAGACATCAAACAATTCATTCTGTAGACA...CTTTGTTGTTTTCTTCATGGAGACATGCAAGCACCTGTAATGTCTCTCATGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019572.9 |
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| CDS TCA 72 bp | TCCTGGGATGGTGGCTGCTGCGTGGCTTTTCACACCTaGAGACCCTTGGTTTTGCTCCAGAAATGTTACCAA | + |
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Preference number: 6 (lower is better) Translates to: SWDGGCCVAFHT*RPLVLLQKCYQ Trigger: TTGGTAACATTTCTGGAGCAAAACCAAGGGTCTTCAGGTGTGAAAAGCCACGCAGCAGCCACCATCCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019572.9 ENSMUST00000223868.2 |
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| CDS GCA 72 bp | GTCTCCACTATAACGTCTCTGGAGTACAGAAAGTGTTaGCTGAGAACTAAGGGCCTTACCACAGTCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: VSTITSLEYRKC*LRTKGLTTVFK Trigger: TTTGAAGACTGTGGTAAGGCCCTTAGTTCTCAGGCAACACTTTCTGTACTCCAGAGACGTTATAGTGGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019572.9 ENSMUST00000223868.2 |
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