Pregenerated sensors for ZFP874A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069206Ensembl transcript IDs: ENSMUST00000057241.15, ENSMUST00000075255.6, ENSMUST00000180580.9, ENSMUST00000223682.2, ENSMUST00000225479.2, ENSMUST00000225778.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GTAGGGTTTGTCGCCAATAAAATGTCCCTGGAGTACAGAAAGTGTTaGCTGAGAACTAAGGGCCTTACCACAGTCTTCAAAGTAGTAGGG | + |
Preference number: 1 (lower is better) Translates to: VGFVANKMSLEYRKC*LRTKGLTTVFKVVG Trigger: CCCTACTACTTTGAAGACTGTGGTAAGGCCCTTAGTTCTCAGGCAACACTTTCTGTACTCCAGGGACATTTTATTGGCGACAAACCCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180580.9 |
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3UTR GCA 90 bp | GATAGGGGGTTTCCTCAGGAACATGTCTTTGTTGTGCACTTATCCTaGTCCCATTGGTTGAAGTATTCCACTGTGTCAGAGACTTACTTG | + |
Preference number: 1 (lower is better) Translates to: DRGFPQEHVFVVHLS*SHWLKYSTVSETYL Trigger: CAAGTAAGTCTCTGACACAGTGGAATACTTCAACCAATGGGAGCAGGATAAGTGCACAACAAAGACATGTTCCTGAGGAAACCCCCTATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR TCA 90 bp | CTATGCTCAGTGAGTGCATTTGGCTTTGGTCCTTATCACAGTATGTaGCATTTGCTTTGGTCCTATTACAGTATGTGCATTTGTTGCTAT | + |
Preference number: 1 (lower is better) Translates to: LCSVSAFGFGPYHSM*HLLWSYYSMCICCY Trigger: ATAGCAACAAATGCACATACTGTAATAGGACCAAAGCAAATGTCACATACTGTGATAAGGACCAAAGCCAAATGCACTCACTGAGCATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR TCA 90 bp | TTCCATGTCCCTTCAGTTGGGAGGCACAGGCAAACATTTTGCCACACTCTTCAGCACATTCCCCATCCTTaGAGGGACTGTCTTCACAGA | + |
Preference number: 2 (lower is better) Translates to: FHVPSVGRHRQTFCHTLQHIPHP*RDCLHR Trigger: TCTGTGAAGACAGTCCCTTCAAGGATGGGGAATGTG...CTGAAGAGTGTGGCAAAATGTTTGCCTGTGCCTCCCAACTGAAGGGACATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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3UTR-3UTR CCA 90 bp | GTGTGGTTTCTCTTTGGTATGAGCTCTCATGCGTACAGGAAGTTATTGGCTGGTAGGTGGACCAGAAGGTaGAGGGAGAAGACAGAGAAA | + |
Preference number: 2 (lower is better) Translates to: VWFLFGMSSHAYRKLLAGRWTRR*REKTEK Trigger: TTTCTCTGTCTTCTCCCTCCACCTTCTGGTCCACCT...ACCAGCCAATAACTTCCTGTACGCATGAGAGCTCATACCAAAGAGAAACCACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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3UTR-3UTR GCA 90 bp | GGCCCAGTACTCAGGTTCAGGCAACCTAAACAACAATGTAACAGCATGGTAACAGCTGGCAGGCACCAATaGAGATCATTTCACCAAAGT | + |
Preference number: 2 (lower is better) Translates to: GPVLRFRQPKQQCNSMVTAGRHQ*RSFHQS Trigger: ACTTTGGTGAAATGATCTGCATTGGTGCCTGCCAGC...TGTTACCATGCTGTTACATTGTTGTTTAGGTTGCCTGAACCTGAGTACTGGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR CAA 90 bp | TACAAAAGTCCTTGGCACATGTGTAGGATTCCTCTTGACAGTGAATaGTTCCATGTCCCTTCAGTTGGGAGGCACAGGCAAACATTTTGC | + |
Preference number: 2 (lower is better) Translates to: YKSPWHMCRIPLDSE*FHVPSVGRHRQTFC Trigger: GCAAAATGTTTGCCTGTGCCTCCCAACTGAAGGGACATGGAACAATTCACTGTCAAGAGGAATCCTACACATGTGCCAAGGACTTTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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3UTR-3UTR TCA 90 bp | ATGTCCCTTCAGTTGGGAGGCACAGGCAAACATTTTGCCACACTCTTCAGAGTTGGTTTCTCTTCAATGTaGACTGCTTTGTGTCTCCTA | + |
Preference number: 2 (lower is better) Translates to: MSLQLGGTGKHFATLFRVGFSSM*TALCLL Trigger: TAGGAGACACAAAGCAGTTCACATTGAAGAGAAACC...AACTCTGAAGAGTGTGGCAAAATGTTTGCCTGTGCCTCCCAACTGAAGGGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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3UTR-3UTR CCA 90 bp | CCTTTAGGAATTAGGGATAGGGGGTTTCCTCAGGAACATGTCTTTGTTGTGCACTACAGGAAGTGCTATTaGATGGTTGGTTCAGGTCCA | + |
Preference number: 2 (lower is better) Translates to: PLGIRDRGFPQEHVFVVHYRKCY*MVGSGP Trigger: TGGACCTGAACCAACCATCCAATAGCACTTCCTGTA...GTGCACAACAAAGACATGTTCCTGAGGAAACCCCCTATCCCTAATTCCTAAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR CCA 90 bp | GGAATTAGGGATAGGGGGTTTCCTCAGGAACATGTCTTTGTTGTGCACTTATCCCCAATAAAATGTCCCTaGAGTACAGAAAGTGTTGCC | + |
Preference number: 2 (lower is better) Translates to: GIRDRGFPQEHVFVVHLSPIKCP*STESVA Trigger: GGCAACACTTTCTGTACTCCAGGGACATTTTATTGG...GGATAAGTGCACAACAAAGACATGTTCCTGAGGAAACCCCCTATCCCTAATTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000180580.9 |
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3UTR CAA 90 bp | TCTAGGTGCACAGCATGTATTCATATTAACGCTGTTGTGTTTTCATaGCTGGAGCTTATCTGGGAGAAGATTTACCACCGCAACAATGGG | + |
Preference number: 2 (lower is better) Translates to: SRCTACIHINAVVFS*LELIWEKIYHRNNG Trigger: CCCATTGTTGCGGTGGTAAATCTTCTCCCAGATAAGCTCCAGCAATGAAAACACAACAGCGTTAATATGAATACATGCTGTGCACCTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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3UTR-3UTR GCA 90 bp | GCAGGCACCAATGCAGATCATTTCACCAAAGTCCATCTTGGTGAGAAATGTGAGTTTCTCTCTGTGAACTaGCTCAAGTCTCCTAAGAAA | + |
Preference number: 2 (lower is better) Translates to: AGTNADHFTKVHLGEKCEFLSVN*LKSPKK Trigger: TTTCTTAGGAGACTTGAGGCAGTTCACAGAGAGAAA...CTCACATTTCTCACCAAGATGGACTTTGGTGAAATGATCTGCATTGGTGCCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR GCA 90 bp | CCTTTAGGAATTAGGGATAGGGGGTTTCCTCAGGAACATGTCTTTGTTGTGCACCAAATCTATCATCTATaGTCAGTGAGTGCATTTGGC | + |
Preference number: 2 (lower is better) Translates to: PLGIRDRGFPQEHVFVVHQIYHL*SVSAFG Trigger: GCCAAATGCACTCACTGAGCATAGATGATAGATTTG...GTGCACAACAAAGACATGTTCCTGAGGAAACCCCCTATCCCTAATTCCTAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR CCA 90 bp | TTCCATGTCCCTTCAGTTGGGAGGCACAGGCAAACATTTTGCCACACTCTTCAGTCGATCACATTTCTATaGTTTCTCTTGACATTGTAC | + |
Preference number: 2 (lower is better) Translates to: FHVPSVGRHRQTFCHTLQSITFL*FLLTLY Trigger: GTACAATGTCAAGAGAAACCATAGAAATGTGATCGA...CTGAAGAGTGTGGCAAAATGTTTGCCTGTGCCTCCCAACTGAAGGGACATGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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3UTR CAA 90 bp | GCAGTTTATACCACAACAACAGATACAGAGGTACAGGAAGTGCTATaGGATGGTTGGTTCAGGTCCAAGTTTATTGTGGGTAACTACACA | + |
Preference number: 2 (lower is better) Translates to: AVYTTTTDTEVQEVL*DGWFRSKFIVGNYT Trigger: TGTGTAGTTACCCACAATAAACTTGGACCTGAACCAACCATCCAATAGCACTTCCTGTACCTCTGTATCTGTTGTTGTGGTATAAACTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR GCA 90 bp | GTGTGGTTTCTCTTTGGTATGAGCTCTCATGCGTACAGGAAGTTATTGGCTGGTCTCTTCAATGTGAACTaGTTTGTGTCTCCTAAGAAA | + |
Preference number: 2 (lower is better) Translates to: VWFLFGMSSHAYRKLLAGLFNVN*FVSPKK Trigger: TTTCTTAGGAGACACAAAGCAGTTCACATTGAAGAG...ACCAGCCAATAACTTCCTGTACGCATGAGAGCTCATACCAAAGAGAAACCACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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3UTR-3UTR GCA 90 bp | CCCACTTACATATCTCTTTCTGCCAAGTTAGATGTCATTTCCCCAGGAGGTCTTCAAATCTATCATCTATaGTCAGTGAGTGCATTTGGC | + |
Preference number: 2 (lower is better) Translates to: PTYISLSAKLDVISPGGLQIYHL*SVSAFG Trigger: GCCAAATGCACTCACTGAGCATAGATGATAGATTTG...AAGACCTCCTGGGGAAATGACATCTAACTTGGCAGAAAGAGATATGTAAGTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR CCA 90 bp | TTCAGAGATCCTGAGTTCAATTTCCAGCAACCACATGGTACCTCACAACCATCTTTGTGTTTTCATTGCTaGAGCTTATCTGGGAGAAGA | + |
Preference number: 2 (lower is better) Translates to: FRDPEFNFQQPHGTSQPSLCFHC*SLSGRR Trigger: TCTTCTCCCAGATAAGCTCCAGCAATGAAAACACAA...AGATGGTTGTGAGGTACCATGTGGTTGCTGGAAATTGAACTCAGGATCTCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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3UTR-3UTR CCA 90 bp | TCAAAGATGTGTCTTTACTGTTATCTGCTCATATTCTTAGCATTTGTGCTCATGCAGAGCAGAAGCACATaGCCTGGAGAAACCCCAAGT | + |
Preference number: 2 (lower is better) Translates to: SKMCLYCYLLIFLAFVLMQSRST*PGETPS Trigger: ACTTGGGGTTTCTCCAGGCCATGTGCTTCTGCTCTG...CATGAGCACAAATGCTAAGAATATGAGCAGATAACAGTAAAGACACATCTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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3UTR-3UTR CCA 90 bp | ATGTCCCTTCAGTTGGGAGGCACAGGCAAACATTTTGCCACACTCTTCAGAGTTGCTGATAACAGTCAATaGAAAAGATTTTCCATCGAT | + |
Preference number: 2 (lower is better) Translates to: MSLQLGGTGKHFATLFRVADNSQ*KRFSID Trigger: ATCGATGGAAAATCTTTTCCATTGACTGTTATCAGC...AACTCTGAAGAGTGTGGCAAAATGTTTGCCTGTGCCTCCCAACTGAAGGGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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3UTR-3UTR CCA 90 bp | GGCCCAGTACTCAGGTTCAGGCAACCTAAACAACAATGTAACAGCATGGTAACAGGTCCAAGTTTATTGTaGGTAACTACACAAAACAGT | + |
Preference number: 2 (lower is better) Translates to: GPVLRFRQPKQQCNSMVTGPSLL*VTTQNS Trigger: ACTGTTTTGTGTAGTTACCCACAATAAACTTGGACC...TGTTACCATGCTGTTACATTGTTGTTTAGGTTGCCTGAACCTGAGTACTGGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR CCA 90 bp | CCCACTTACATATCTCTTTCTGCCAAGTTAGATGTCATTTCCCCAGGAGGTCTTGTGCTATTGGATGGTTaGTTCAGGTCCAAGTTTATT | + |
Preference number: 2 (lower is better) Translates to: PTYISLSAKLDVISPGGLVLLDG*FRSKFI Trigger: AATAAACTTGGACCTGAACCAACCATCCAATAGCAC...AAGACCTCCTGGGGAAATGACATCTAACTTGGCAGAAAGAGATATGTAAGTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR TCA 90 bp | CCCACTTACATATCTCTTTCTGCCAAGTTAGATGTCATTTCCCCAGGAGGTCTTGTGTTTCCTAAGATATaGGTGATGAAGAAAGGCTTT | + |
Preference number: 2 (lower is better) Translates to: PTYISLSAKLDVISPGGLVFPKI*VMKKGF Trigger: AAAGCCTTTCTTCATCACTCATATCTTAGGAAACAC...AAGACCTCCTGGGGAAATGACATCTAACTTGGCAGAAAGAGATATGTAAGTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180580.9 |
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3UTR-3UTR GCA 90 bp | AACAGGGAAGTATTAGAAGACAAGGCTTTTTCCCCATTGTTCACACTTCTATGGCTGTTGTGTTTTCATTaGTGGAGCTTATCTGGGAGA | + |
Preference number: 2 (lower is better) Translates to: NREVLEDKAFSPLFTLLWLLCFH*WSLSGR Trigger: TCTCCCAGATAAGCTCCAGCAATGAAAACACAACAG...CCATAGAAGTGTGAACAATGGGGAAAAAGCCTTGTCTTCTAATACTTCCCTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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3UTR-3UTR GCA 90 bp | GGCCCAGTACTCAGGTTCAGGCAACCTAAACAACAATGTAACAGCATGGTAACAACAGTATGTGACATTTaGTTTGGTCCTATTACAGTA | + |
Preference number: 2 (lower is better) Translates to: GPVLRFRQPKQQCNSMVTTVCDI*FGPITV Trigger: TACTGTAATAGGACCAAAGCAAATGTCACATACTGT...TGTTACCATGCTGTTACATTGTTGTTTAGGTTGCCTGAACCTGAGTACTGGGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR CCA 90 bp | GCAGGCACCAATGCAGATCATTTCACCAAAGTCCATCTTGGTGAGAAATGTGAGAGATGTTCCTGTAGGTaGAAAGAACTAGAAAATCTT | + |
Preference number: 2 (lower is better) Translates to: AGTNADHFTKVHLGEKCERCSCR*KELENL Trigger: AAGATTTTCTAGTTCTTTCCACCTACAGGAACATCT...CTCACATTTCTCACCAAGATGGACTTTGGTGAAATGATCTGCATTGGTGCCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR CCA 90 bp | GGCCCAGTACTCAGGTTCAGGCAACCTAAACAACAATGTAACAGCATGGTAACAATGGTAACAACTTCATaGTGTATTGATAGTCACAGA | + |
Preference number: 2 (lower is better) Translates to: GPVLRFRQPKQQCNSMVTMVTTS*CIDSHR Trigger: TCTGTGACTATCAATACACCATGAAGTTGTTACCAT...TGTTACCATGCTGTTACATTGTTGTTTAGGTTGCCTGAACCTGAGTACTGGGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR CCA 90 bp | CCTTTAGGAATTAGGGATAGGGGGTTTCCTCAGGAACATGTCTTTGTTGTGCACCATGGGAAATGTCTATaGAATGGATTTGATGTCTTT | + |
Preference number: 2 (lower is better) Translates to: PLGIRDRGFPQEHVFVVHHGKCL*NGFDVF Trigger: AAAGACATCAAATCCATTCCATAGACATTTCCCATG...GTGCACAACAAAGACATGTTCCTGAGGAAACCCCCTATCCCTAATTCCTAAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180580.9 |
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3UTR-3UTR GCA 90 bp | ACACAAAACAGTTTTACTGACTTCTATAGTGATTGGTTTCCAAGAGCAGAGAATGCTGGCAGGCACCAATaGAGATCATTTCACCAAAGT | + |
Preference number: 2 (lower is better) Translates to: TQNSFTDFYSDWFPRAENAGRHQ*RSFHQS Trigger: ACTTTGGTGAAATGATCTGCATTGGTGCCTGCCAGC...ATTCTCTGCTCTTGGAAACCAATCACTATAGAAGTCAGTAAAACTGTTTTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR CCA 90 bp | CCCACTTACATATCTCTTTCTGCCAAGTTAGATGTCATTTCCCCAGGAGGTCTTAGATGTTCCTGTAGGTaGAAAGAACTAGAAAATCTT | + |
Preference number: 2 (lower is better) Translates to: PTYISLSAKLDVISPGGLRCSCR*KELENL Trigger: AAGATTTTCTAGTTCTTTCCACCTACAGGAACATCT...AAGACCTCCTGGGGAAATGACATCTAACTTGGCAGAAAGAGATATGTAAGTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR TCA 90 bp | GGTCCAAGTTTATTGTGGGTAACTACACAAAACAGTTTTACTGACTTCTATAGTATCATCTATGCTCAGTaGGTGCATTTGGCTTTGGTC | + |
Preference number: 2 (lower is better) Translates to: GPSLLWVTTQNSFTDFYSIIYAQ*VHLALV Trigger: GACCAAAGCCAAATGCACTCACTGAGCATAGATGAT...ACTATAGAAGTCAGTAAAACTGTTTTGTGTAGTTACCCACAATAAACTTGGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR TCA 90 bp | CTACACAAAACAGTTTTACTGACTTCTATAGTGATTGGTTTCCAAGAGCAGAGAACAAAGATAGTTTATTaGACATACGCCCAAGGACCG | + |
Preference number: 2 (lower is better) Translates to: LHKTVLLTSIVIGFQEQRTKIVY*TYAQGP Trigger: CGGTCCTTGGGCGTATGTTCAATAAACTATCTTTGT...TCTCTGCTCTTGGAAACCAATCACTATAGAAGTCAGTAAAACTGTTTTGTGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR GCA 90 bp | CCTATTACAGTATGTGCATTTGTTGCTATGAAAATGATGATGGTACACATACACACAGCGGTAAGATCCTaGAATGAGACACTGTTCACA | + |
Preference number: 2 (lower is better) Translates to: PITVCAFVAMKMMMVHIHTAVRS*NETLFT Trigger: TGTGAACAGTGTCTCATTGCAGGATCTTACCGCTGT...GTGTATGTGTACCATCATCATTTTCATAGCAACAAATGCACATACTGTAATAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR CCA 90 bp | GATGTGTCTTTACTGTTATCTGCTCATATTCTTAGCATTTGTGCTCATGGACATAGGAGAACTGATGATTaGGCAGATAAAAGGGAAGGT | + |
Preference number: 2 (lower is better) Translates to: DVSLLLSAHILSICAHGHRRTDD*ADKREG Trigger: ACCTTCCCTTTTATCTGCCCAATCATCAGTTCTCCT...ATGTCCATGAGCACAAATGCTAAGAATATGAGCAGATAACAGTAAAGACACATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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3UTR-3UTR CCA 90 bp | AACAGGGAAGTATTAGAAGACAAGGCTTTTTCCCCATTGTTCACACTTCTATGGCATACTCTTCACAAGTaGTTTCTCTTCAATGTGAAC | + |
Preference number: 2 (lower is better) Translates to: NREVLEDKAFSPLFTLLWHTLHK*FLFNVN Trigger: GTTCACATTGAAGAGAAACCACTTGTGAAGAGTATG...CCATAGAAGTGTGAACAATGGGGAAAAAGCCTTGTCTTCTAATACTTCCCTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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3UTR-3UTR CCA 90 bp | AAATCTTTTGCCACATTATACACACTCATGGGAAATGTCTATGGAATGGATTTGCTCAGTGAGTGCATTTaGCTTTGGTCCTTATCACAG | + |
Preference number: 2 (lower is better) Translates to: KSFATLYTLMGNVYGMDLLSECI*LWSLSQ Trigger: CTGTGATAAGGACCAAAGCCAAATGCACTCACTGAG...CAAATCCATTCCATAGACATTTCCCATGAGTGTGTATAATGTGGCAAAAGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180580.9 |
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3UTR-3UTR TCA 90 bp | GATGTGTCTTTACTGTTATCTGCTCATATTCTTAGCATTTGTGCTCATGGACATGAATCAGCATTCAGGTaGTTTCCTGTAAACCTTCTT | + |
Preference number: 2 (lower is better) Translates to: DVSLLLSAHILSICAHGHESAFR*FPVNLL Trigger: AAGAAGGTTTACAGGAAATCACCTGAATGCTGATTC...ATGTCCATGAGCACAAATGCTAAGAATATGAGCAGATAACAGTAAAGACACATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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3UTR-3UTR TCA 90 bp | CTACACAAAACAGTTTTACTGACTTCTATAGTGATTGGTTTCCAAGAGCAGAGACCTTATCACAGTATGTaGCATTTGCTTTGGTCCTAT | + |
Preference number: 2 (lower is better) Translates to: LHKTVLLTSIVIGFQEQRPYHSM*HLLWSY Trigger: ATAGGACCAAAGCAAATGTCACATACTGTGATAAGG...TCTCTGCTCTTGGAAACCAATCACTATAGAAGTCAGTAAAACTGTTTTGTGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR GCA 90 bp | GGTCCAAGTTTATTGTGGGTAACTACACAAAACAGTTTTACTGACTTCTATAGTTCTATGCTCAGTGAGTaGATTTGGCTTTGGTCCTTA | + |
Preference number: 2 (lower is better) Translates to: GPSLLWVTTQNSFTDFYSSMLSE*IWLWSL Trigger: TAAGGACCAAAGCCAAATGCACTCACTGAGCATAGA...ACTATAGAAGTCAGTAAAACTGTTTTGTGTAGTTACCCACAATAAACTTGGACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR GCA 90 bp | AATAGTTTTTATATCTCATACATAGGTGCCTATTCCAGGAGCAGTTTATACCACTCTATGCTCAGTGAGTaGATTTGGCTTTGGTCCTTA | + |
Preference number: 2 (lower is better) Translates to: NSFYISYIGAYSRSSLYHSMLSE*IWLWSL Trigger: TAAGGACCAAAGCCAAATGCACTCACTGAGCATAGA...GTGGTATAAACTGCTCCTGGAATAGGCACCTATGTATGAGATATAAAAACTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR GCA 90 bp | CTACACAAAACAGTTTTACTGACTTCTATAGTGATTGGTTTCCAAGAGCAGAGACTCTCTAGTATGAACTaGTCTGTGTCTCCTAAGAAA | + |
Preference number: 2 (lower is better) Translates to: LHKTVLLTSIVIGFQEQRLSSMN*SVSPKK Trigger: TTTCTTAGGAGACACAGAGCAGTTCATACTAGAGAG...TCTCTGCTCTTGGAAACCAATCACTATAGAAGTCAGTAAAACTGTTTTGTGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180580.9 |
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3UTR-3UTR CCA 90 bp | AATAGTTTTTATATCTCATACATAGGTGCCTATTCCAGGAGCAGTTTATACCACATAGTAACTATACCATaGCCCAGTACTCAGGTTCAG | + |
Preference number: 2 (lower is better) Translates to: NSFYISYIGAYSRSSLYHIVTIP*PSTQVQ Trigger: CTGAACCTGAGTACTGGGCCATGGTATAGTTACTAT...GTGGTATAAACTGCTCCTGGAATAGGCACCTATGTATGAGATATAAAAACTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR CCA 90 bp | GGTCCAAGTTTATTGTGGGTAACTACACAAAACAGTTTTACTGACTTCTATAGTATAGTAACTATACCATaGCCCAGTACTCAGGTTCAG | + |
Preference number: 2 (lower is better) Translates to: GPSLLWVTTQNSFTDFYSIVTIP*PSTQVQ Trigger: CTGAACCTGAGTACTGGGCCATGGTATAGTTACTAT...ACTATAGAAGTCAGTAAAACTGTTTTGTGTAGTTACCCACAATAAACTTGGACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR CCA 90 bp | CCTATTACAGTATGTGCATTTGTTGCTATGAAAATGATGATGGTACACATACACGAGTGCATTTGGCTTTaGTCCTTATCACAGTATGTG | + |
Preference number: 2 (lower is better) Translates to: PITVCAFVAMKMMMVHIHECIWL*SLSQYV Trigger: CACATACTGTGATAAGGACCAAAGCCAAATGCACTC...GTGTATGTGTACCATCATCATTTTCATAGCAACAAATGCACATACTGTAATAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR CCA 90 bp | AAATCTTTTGCCACATTATACACACTCATGGGAAATGTCTATGGAATGGATTTGGAGTGCATTTGGCTTTaGTCCTTATCACAGTATGTG | + |
Preference number: 2 (lower is better) Translates to: KSFATLYTLMGNVYGMDLECIWL*SLSQYV Trigger: CACATACTGTGATAAGGACCAAAGCCAAATGCACTC...CAAATCCATTCCATAGACATTTCCCATGAGTGTGTATAATGTGGCAAAAGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180580.9 |
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3UTR-3UTR CCA 90 bp | CTACACAAAACAGTTTTACTGACTTCTATAGTGATTGGTTTCCAAGAGCAGAGAGTGCTATTGGATGGTTaGTTCAGGTCCAAGTTTATT | + |
Preference number: 2 (lower is better) Translates to: LHKTVLLTSIVIGFQEQRVLLDG*FRSKFI Trigger: AATAAACTTGGACCTGAACCAACCATCCAATAGCAC...TCTCTGCTCTTGGAAACCAATCACTATAGAAGTCAGTAAAACTGTTTTGTGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
||
3UTR-3UTR CCA 90 bp | GGTCCAAGTTTATTGTGGGTAACTACACAAAACAGTTTTACTGACTTCTATAGTCATTCTACACACTCATaGGGAGTATCTTCAGAATGG | + |
Preference number: 2 (lower is better) Translates to: GPSLLWVTTQNSFTDFYSHSTHS*GVSSEW Trigger: CCATTCTGAAGATACTCCCCATGAGTGTGTAGAATG...ACTATAGAAGTCAGTAAAACTGTTTTGTGTAGTTACCCACAATAAACTTGGACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180580.9 |
||
3UTR-3UTR TCA 90 bp | CTACACAAAACAGTTTTACTGACTTCTATAGTGATTGGTTTCCAAGAGCAGAGATCAATGGCCTCATTGTaGTTGTTAAATTCATTGCCT | + |
Preference number: 2 (lower is better) Translates to: LHKTVLLTSIVIGFQEQRSMASL*LLNSLP Trigger: AGGCAATGAATTTAACAATCACAATGAGGCCATTGA...TCTCTGCTCTTGGAAACCAATCACTATAGAAGTCAGTAAAACTGTTTTGTGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180580.9 |
||
3UTR-3UTR TCA 90 bp | CTACACAAAACAGTTTTACTGACTTCTATAGTGATTGGTTTCCAAGAGCAGAGATCTATGGAATGGATTTaGTGTCTTTTCAGGGATGTA | + |
Preference number: 2 (lower is better) Translates to: LHKTVLLTSIVIGFQEQRSMEWI*CLFRDV Trigger: TACATCCCTGAAAAGACATCAAATCCATTCCATAGA...TCTCTGCTCTTGGAAACCAATCACTATAGAAGTCAGTAAAACTGTTTTGTGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000180580.9 |
||
3UTR-3UTR GCA 90 bp | GGTCCAAGTTTATTGTGGGTAACTACACAAAACAGTTTTACTGACTTCTATAGTTTTCTCTCTGTGAACTaGCTCAAGTCTCCTAAGAAA | + |
Preference number: 2 (lower is better) Translates to: GPSLLWVTTQNSFTDFYSFLSVN*LKSPKK Trigger: TTTCTTAGGAGACTTGAGGCAGTTCACAGAGAGAAA...ACTATAGAAGTCAGTAAAACTGTTTTGTGTAGTTACCCACAATAAACTTGGACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
||
3UTR-3UTR GCA 90 bp | ACACAAAACAGTTTTACTGACTTCTATAGTGATTGGTTTCCAAGAGCAGAGAATTATCTCATACATAGGTaGCTATTCCAGGAGCAGTTT | + |
Preference number: 2 (lower is better) Translates to: TQNSFTDFYSDWFPRAENYLIHR*LFQEQF Trigger: AAACTGCTCCTGGAATAGGCACCTATGTATGAGATA...ATTCTCTGCTCTTGGAAACCAATCACTATAGAAGTCAGTAAAACTGTTTTGTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
||
3UTR-3UTR GCA 90 bp | CCTATTACAGTATGTGCATTTGTTGCTATGAAAATGATGATGGTACACATACACTATCTCATACATAGGTaGCTATTCCAGGAGCAGTTT | + |
Preference number: 2 (lower is better) Translates to: PITVCAFVAMKMMMVHIHYLIHR*LFQEQF Trigger: AAACTGCTCCTGGAATAGGCACCTATGTATGAGATA...GTGTATGTGTACCATCATCATTTTCATAGCAACAAATGCACATACTGTAATAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
||
3UTR-3UTR CCA 90 bp | GGTCCAAGTTTATTGTGGGTAACTACACAAAACAGTTTTACTGACTTCTATAGTTCTTTCAGCACTTCCTaGGGGAGACAAACATTAATT | + |
Preference number: 2 (lower is better) Translates to: GPSLLWVTTQNSFTDFYSSFSTS*GRQTLI Trigger: AATTAATGTTTGTCTCCCCCAGGAAGTGCTGAAAGA...ACTATAGAAGTCAGTAAAACTGTTTTGTGTAGTTACCCACAATAAACTTGGACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
||
3UTR-3UTR TCA 90 bp | GGTCCAAGTTTATTGTGGGTAACTACACAAAACAGTTTTACTGACTTCTATAGTTGCAGGATAGTAAAATaGATTTCCACACTCTTCACA | + |
Preference number: 2 (lower is better) Translates to: GPSLLWVTTQNSFTDFYSCRIVK*ISTLFT Trigger: TGTGAAGAGTGTGGAAATTCATTTTACTATCCTGCA...ACTATAGAAGTCAGTAAAACTGTTTTGTGTAGTTACCCACAATAAACTTGGACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000180580.9 |
||
3UTR-3UTR TCA 90 bp | AAATCTTTTGCCACATTATACACACTCATGGGAAATGTCTATGGAATGGATTTGTCAGAATGGATGATTTaGTGTCTTTTAAGGGACGTA | + |
Preference number: 2 (lower is better) Translates to: KSFATLYTLMGNVYGMDLSEWMI*CLLRDV Trigger: TACGTCCCTTAAAAGACATCAAATCATCCATTCTGA...CAAATCCATTCCATAGACATTTCCCATGAGTGTGTATAATGTGGCAAAAGATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180580.9 |
||
3UTR-3UTR CCA 90 bp | CTACACAAAACAGTTTTACTGACTTCTATAGTGATTGGTTTCCAAGAGCAGAGATCAATTCCTTTATGCTaGTTAAGAAAGAAAGCAGAG | + |
Preference number: 2 (lower is better) Translates to: LHKTVLLTSIVIGFQEQRSIPLC*LRKKAE Trigger: CTCTGCTTTCTTTCTTAACCAGCATAAAGGAATTGA...TCTCTGCTCTTGGAAACCAATCACTATAGAAGTCAGTAAAACTGTTTTGTGTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180580.9 |
||
3UTR-3UTR GCA 90 bp | AATAGTTTTTATATCTCATACATAGGTGCCTATTCCAGGAGCAGTTTATACCACACAGTATGTGACATTTaGTTTGGTCCTATTACAGTA | + |
Preference number: 2 (lower is better) Translates to: NSFYISYIGAYSRSSLYHTVCDI*FGPITV Trigger: TACTGTAATAGGACCAAAGCAAATGTCACATACTGT...GTGGTATAAACTGCTCCTGGAATAGGCACCTATGTATGAGATATAAAAACTATT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
||
3UTR GCA 72 bp | CATGTCCCTTCAGTTGGGAGGCACAGGCAAACATTTTaGCACACTCTTCAGAGTTGTGGTGTTGCTCTCCGG | + |
Preference number: 3 (lower is better) Translates to: HVPSVGRHRQTF*HTLQSCGVALR Trigger: CCGGAGAGCAACACCACAACTCTGAAGAGTGTGGCAAAATGTTTGCCTGTGCCTCCCAACTGAAGGGACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
||
3UTR GCA 72 bp | ACCAGGATGTCAGTTACCCACTTACATATCTCTTTCTaGCAAGTTAGATGTCATTTCCCCAGGAGGTCTTGG | + |
Preference number: 3 (lower is better) Translates to: TRMSVTHLHISF*QVRCHFPRRSW Trigger: CCAAGACCTCCTGGGGAAATGACATCTAACTTGGCAGAAAGAGATATGTAAGTGGGTAACTGACATCCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
||
3UTR GCA 72 bp | GTCGCCAATAAAATGTCCCTGGAGTACAGAAAGTGTTaGCTGAGAACTAAGGGCCTTACCACAGTCTTCAAA | + |
Preference number: 3 (lower is better) Translates to: VANKMSLEYRKC*LRTKGLTTVFK Trigger: TTTGAAGACTGTGGTAAGGCCCTTAGTTCTCAGGCAACACTTTCTGTACTCCAGGGACATTTTATTGGCGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180580.9 |
||
3UTR CCA 72 bp | TGGTATGAGCTCTCATGCGTACAGGAAGTTATTGGCTaGTACAAAAGTCCTTGGCACATGTGTAGGATTCCT | + |
Preference number: 3 (lower is better) Translates to: WYELSCVQEVIG*YKSPWHMCRIP Trigger: AGGAATCCTACACATGTGCCAAGGACTTTTGTACCAGCCAATAACTTCCTGTACGCATGAGAGCTCATACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
||
3UTR-3UTR CAA 90 bp | GTGTGGTTTCTCTTTGGTATGAGCTCTCATGCGTACAGGAAGTTATTGGCTGGTAAGGCTTTTTCCCCATaGTTCACACTTCTATGGTTC | + |
Preference number: 3 (lower is better) Translates to: VWFLFGMSSHAYRKLLAGKAFSP*FTLLWF Trigger: GAACCATAGAAGTGTGAACAATGGGGAAAAAGCCTT...ACCAGCCAATAACTTCCTGTACGCATGAGAGCTCATACCAAAGAGAAACCACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
||
3UTR-3UTR CAA 90 bp | ACTGTTCTTTCAGAGATCCTGAGTTCAATTTCCAGCAACCACATGGTACCTCACGGACGTGGTTTACACTaGTGTGGTTTCTCTTTGGTA | + |
Preference number: 3 (lower is better) Translates to: TVLSEILSSISSNHMVPHGRGLH*CGFSLV Trigger: TACCAAAGAGAAACCACACAAGTGTAAACCACGTCC...GTGAGGTACCATGTGGTTGCTGGAAATTGAACTCAGGATCTCTGAAAGAACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
||
3UTR TCA 72 bp | AGATTAGAGATTTTCTATTCTGGAACCAAACGTGACTaGCAACCTGTTCTTTCAGCACTTCCTGGGGGAGAC | + |
Preference number: 3 (lower is better) Translates to: RLEIFYSGTKRD*QPVLSALPGGD Trigger: GTCTCCCCCAGGAAGTGCTGAAAGAACAGGTTGTCAGTCACGTTTGGTTCCAGAATAGAAAATCTCTAATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
||
3UTR TCA 72 bp | AAGCAGATTAGAGATTTTCTATTCTGGAACCAAACGTaGCTGACAACCTGTTCTTTCAGCACTTCCTGGGGG | + |
Preference number: 3 (lower is better) Translates to: KQIRDFLFWNQT*LTTCSFSTSWG Trigger: CCCCCAGGAAGTGCTGAAAGAACAGGTTGTCAGTCACGTTTGGTTCCAGAATAGAAAATCTCTAATCTGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR GCA 72 bp | TTTCCTCAGGAACATGTCTTTGTTGTGCACTTATCCTaGTCCCATTGGTTGAAGTATTCCACTGTGTCAGAG | + |
Preference number: 3 (lower is better) Translates to: FPQEHVFVVHLS*SHWLKYSTVSE Trigger: CTCTGACACAGTGGAATACTTCAACCAATGGGAGCAGGATAAGTGCACAACAAAGACATGTTCCTGAGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
||
3UTR CCA 72 bp | CCACAACAACAGATACAGAGGTACAGGAAGTGCTATTaGATGGTTGGTTCAGGTCCAAGTTTATTGTGGGTA | + |
Preference number: 3 (lower is better) Translates to: PQQQIQRYRKCY*MVGSGPSLLWV Trigger: TACCCACAATAAACTTGGACCTGAACCAACCATCCAATAGCACTTCCTGTACCTCTGTATCTGTTGTTGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
||
3UTR-3UTR CAA 90 bp | GGCCCAGTACTCAGGTTCAGGCAACCTAAACAACAATGTAACAGCATGGTAACATCACCAAAGTCCATCTaGGTGAGAAATGTGAGTTTA | + |
Preference number: 3 (lower is better) Translates to: GPVLRFRQPKQQCNSMVTSPKSI*VRNVSL Trigger: TAAACTCACATTTCTCACCAAGATGGACTTTGGTGA...TGTTACCATGCTGTTACATTGTTGTTTAGGTTGCCTGAACCTGAGTACTGGGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
||
3UTR-3UTR CAA 90 bp | GGAATTAGGGATAGGGGGTTTCCTCAGGAACATGTCTTTGTTGTGCACTTATCCCTTTCCTTCGTATCTTaGGATGTCTCATCTATCATC | + |
Preference number: 3 (lower is better) Translates to: GIRDRGFPQEHVFVVHLSLSFVS*DVSSII Trigger: GATGATAGATGAGACATCCAAAGATACGAAGGAAAG...GGATAAGTGCACAACAAAGACATGTTCCTGAGGAAACCCCCTATCCCTAATTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180580.9 |
||
3UTR-3UTR CAA 90 bp | GATGTGTCTTTACTGTTATCTGCTCATATTCTTAGCATTTGTGCTCATGGACATCGCGTAGAAAAAGCTTaGCCACATTCCCCATCCTTG | + |
Preference number: 3 (lower is better) Translates to: DVSLLLSAHILSICAHGHRVEKA*PHSPSL Trigger: CAAGGATGGGGAATGTGGCAAAGCTTTTTCTACGCG...ATGTCCATGAGCACAAATGCTAAGAATATGAGCAGATAACAGTAAAGACACATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
||
3UTR-3UTR CAA 90 bp | CCTTTAGGAATTAGGGATAGGGGGTTTCCTCAGGAACATGTCTTTGTTGTGCACTATGTGACATTTGCTTaGGTCCTATTACAGTATGTG | + |
Preference number: 3 (lower is better) Translates to: PLGIRDRGFPQEHVFVVHYVTFA*VLLQYV Trigger: CACATACTGTAATAGGACCAAAGCAAATGTCACATA...GTGCACAACAAAGACATGTTCCTGAGGAAACCCCCTATCCCTAATTCCTAAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR CAA 90 bp | GGCCCAGTACTCAGGTTCAGGCAACCTAAACAACAATGTAACAGCATGGTAACAGATGTTGCTTCAGCATaGCAGGATAGTAAAATGAAT | + |
Preference number: 3 (lower is better) Translates to: GPVLRFRQPKQQCNSMVTDVASA*QDSKMN Trigger: ATTCATTTTACTATCCTGCAATGCTGAAGCAACATC...TGTTACCATGCTGTTACATTGTTGTTTAGGTTGCCTGAACCTGAGTACTGGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180580.9 |
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3UTR GCA 72 bp | TTCCTAGGTCCCAACAATAATCAAATCTATCATCTATaGTCAGTGAGTGCATTTGGCTTTGGTCCTTATCAC | + |
Preference number: 3 (lower is better) Translates to: FLGPNNNQIYHL*SVSAFGFGPYH Trigger: GTGATAAGGACCAAAGCCAAATGCACTCACTGAGCATAGATGATAGATTTGATTATTGTTGGGACCTAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR CCA 72 bp | CATGTATTCATATTAACGCTGTTGTGTTTTCATTGCTaGAGCTTATCTGGGAGAAGATTTACCACCGCAACA | + |
Preference number: 3 (lower is better) Translates to: HVFILTLLCFHC*SLSGRRFTTAT Trigger: TGTTGCGGTGGTAAATCTTCTCCCAGATAAGCTCCAGCAATGAAAACACAACAGCGTTAATATGAATACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
||
3UTR CCA 72 bp | CTTACAAAACCCATAAGAGACATTATTACAGGCGCTTaGGTGACCCTGCTGGGAAAAACAATAGTAACTATA | + |
Preference number: 3 (lower is better) Translates to: LTKPIRDIITGA*VTLLGKTIVTI Trigger: TATAGTTACTATTGTTTTTCCCAGCAGGGTCACCCAAGCGCCTGTAATAATGTCTCTTATGGGTTTTGTAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
||
3UTR TCA 72 bp | GTCCCAACAATAATCAAATCTATCATCTATGCTCAGTaGGTGCATTTGGCTTTGGTCCTTATCACAGTATGT | + |
Preference number: 3 (lower is better) Translates to: VPTIIKSIIYAQ*VHLALVLITVC Trigger: ACATACTGTGATAAGGACCAAAGCCAAATGCACTCACTGAGCATAGATGATAGATTTGATTATTGTTGGGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR GCA 72 bp | CATTTGGCTTTGGTCCTTATCACAGTATGTGACATTTaGTTTGGTCCTATTACAGTATGTGCATTTGTTGCT | + |
Preference number: 3 (lower is better) Translates to: HLALVLITVCDI*FGPITVCAFVA Trigger: AGCAACAAATGCACATACTGTAATAGGACCAAAGCAAATGTCACATACTGTGATAAGGACCAAAGCCAAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR-3UTR CAA 90 bp | AATAGTTTTTATATCTCATACATAGGTGCCTATTCCAGGAGCAGTTTATACCACGACAAAGATAGTTTATaGAACATACGCCCAAGGACC | + |
Preference number: 3 (lower is better) Translates to: NSFYISYIGAYSRSSLYHDKDSL*NIRPRT Trigger: GGTCCTTGGGCGTATGTTCAATAAACTATCTTTGTC...GTGGTATAAACTGCTCCTGGAATAGGCACCTATGTATGAGATATAAAAACTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR TCA 72 bp | TTTCTCTCTGTGAACTGCCTCAAGTCTCCTAAGAAATaGATGATAAAGAAAGGCTTTGTGACAGTCTTCATA | + |
Preference number: 3 (lower is better) Translates to: FLSVNCLKSPKK*MIKKGFVTVFI Trigger: TATGAAGACTGTCACAAAGCCTTTCTTTATCATTCATTTCTTAGGAGACTTGAGGCAGTTCACAGAGAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR CCA 72 bp | TGCTATTGGATGGTTGGTTCAGGTCCAAGTTTATTGTaGGTAACTACACAAAACAGTTTTACTGACTTCTAT | + |
Preference number: 3 (lower is better) Translates to: CYWMVGSGPSLL*VTTQNSFTDFY Trigger: ATAGAAGTCAGTAAAACTGTTTTGTGTAGTTACCCACAATAAACTTGGACCTGAACCAACCATCCAATAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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3UTR CCA 72 bp | TACCATAACAAATGTCTCAATGTTCATGGTAAATCCTaGCTTTCCTTCGTATCTTTGGATGTCTCATCTATC | + |
Preference number: 3 (lower is better) Translates to: YHNKCLNVHGKS*LSFVSLDVSSI Trigger: GATAGATGAGACATCCAAAGATACGAAGGAAAGCCAGGATTTACCATGAACATTGAGACATTTGTTATGGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180580.9 |
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3UTR-3UTR CAA 90 bp | ACACAAAACAGTTTTACTGACTTCTATAGTGATTGGTTTCCAAGAGCAGAGAATCATTCATGTATTAATTaGGCAACCAGGATGTCAGTT | + |
Preference number: 3 (lower is better) Translates to: TQNSFTDFYSDWFPRAENHSCIN*ATRMSV Trigger: AACTGACATCCTGGTTGCCAAATTAATACATGAATG...ATTCTCTGCTCTTGGAAACCAATCACTATAGAAGTCAGTAAAACTGTTTTGTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
||
3UTR TCA 72 bp | TATACACACTCATGGGAAATGTCTATGGAATGGATTTaGTGTCTTTTCAGGGATGTAAAGGAAGAAAAACAT | + |
Preference number: 3 (lower is better) Translates to: YTHSWEMSMEWI*CLFRDVKEEKH Trigger: ATGTTTTTCTTCCTTTACATCCCTGAAAAGACATCAAATCCATTCCATAGACATTTCCCATGAGTGTGTATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180580.9 |
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CDS-3UTR CCA 90 bp | GCTTTGCCACATTCCCCATCCTTGAAGGGACTGTCTTCACAGAATTGTTTGATGCTGCTTTGTGTCTCCTaGAGGCACGGTGCCTGCTCT | + |
Preference number: 4 (lower is better) Translates to: ALPHSPSLKGLSSQNCLMLLCVS*RHGACS Trigger: AGAGCAGGCACCGTGCCTCCAGGAGACACAAAGCAG...CATCAAACAATTCTGTGAAGACAGTCCCTTCAAGGATGGGGAATGTGGCAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225778.2 |
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CDS-3UTR TCA 90 bp | GCTTTGCCACATTCCCCATCCTTGAAGGGACTGTCTTCACAGAATTGTTTGATGTGGAGGAATGGTGGCTaGTGTTTGGCTTTTCACACC | + |
Preference number: 4 (lower is better) Translates to: ALPHSPSLKGLSSQNCLMWRNGG*CLAFHT Trigger: GGTGTGAAAAGCCAAACATCAGCCACCATTCCTCCA...CATCAAACAATTCTGTGAAGACAGTCCCTTCAAGGATGGGGAATGTGGCAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057241.15 ENSMUST00000225778.2 |
||
CDS-3UTR CCA 90 bp | CCTTTAGGAATTAGGGATAGGGGGTTTCCTCAGGAACATGTCTTTGTTGTGCACCCCAGGAAATCAAGGTaGCTGAAATTCTCCAGCATC | + |
Preference number: 4 (lower is better) Translates to: PLGIRDRGFPQEHVFVVHPRKSR*LKFSSI Trigger: GATGCTGGAGAATTTCAGCCACCTTGATTTCCTGGG...GTGCACAACAAAGACATGTTCCTGAGGAAACCCCCTATCCCTAATTCCTAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
||
CDS-3UTR CCA 90 bp | GGAATTAGGGATAGGGGGTTTCCTCAGGAACATGTCTTTGTTGTGCACTTATCCCCCAGGAAATCAAGGTaGCTGAAATTCTCCAGCATC | + |
Preference number: 4 (lower is better) Translates to: GIRDRGFPQEHVFVVHLSPRKSR*LKFSSI Trigger: GATGCTGGAGAATTTCAGCCACCTTGATTTCCTGGG...GGATAAGTGCACAACAAAGACATGTTCCTGAGGAAACCCCCTATCCCTAATTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
||
CDS-3UTR CCA 90 bp | GTTGTGTTTTCATTGCTGGAGCTTATCTGGGAGAAGATTTACCACCGCAACAATATTGCCTGTTATTCCTaGAGGCACGGTGCCTGCTCT | + |
Preference number: 4 (lower is better) Translates to: VVFSLLELIWEKIYHRNNIACYS*RHGACS Trigger: AGAGCAGGCACCGTGCCTCCAGGAATAACAGGCAAT...ATTGTTGCGGTGGTAAATCTTCTCCCAGATAAGCTCCAGCAATGAAAACACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
||
CDS-3UTR TCA 90 bp | CATTGCCTGTTGTTCCAATGGACATGTCATCCAGACAAAAACAGGGAAGAAATGTGGAGGAATGGTGGCTaGTGTTTGGCTTTTCACACC | + |
Preference number: 4 (lower is better) Translates to: HCLLFQWTCHPDKNREEMWRNGG*CLAFHT Trigger: GGTGTGAAAAGCCAAACATCAGCCACCATTCCTCCA...CATTTCTTCCCTGTTTTTGTCTGGATGACATGTCCATTGGAACAACAGGCAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223682.2 |
||
CDS-3UTR CCA 90 bp | TTCAGAGATCCTGAGTTCAATTTCCAGCAACCACATGGTACCTCACAACCATCTCCCAGGAAATCAAGGTaGCTGAAATTCTCCAGCATC | + |
Preference number: 4 (lower is better) Translates to: FRDPEFNFQQPHGTSQPSPRKSR*LKFSSI Trigger: GATGCTGGAGAATTTCAGCCACCTTGATTTCCTGGG...AGATGGTTGTGAGGTACCATGTGGTTGCTGGAAATTGAACTCAGGATCTCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
||
CDS-3UTR CCA 90 bp | ACTGTTCTTTCAGAGATCCTGAGTTCAATTTCCAGCAACCACATGGTACCTCACGACCTGGAGGAATGGTaGCTGATGTTTGGCTTTTCA | + |
Preference number: 4 (lower is better) Translates to: TVLSEILSSISSNHMVPHDLEEW*LMFGFS Trigger: TGAAAAGCCAAACATCAGCCACCATTCCTCCAGGTC...GTGAGGTACCATGTGGTTGCTGGAAATTGAACTCAGGATCTCTGAAAGAACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
||
CDS-3UTR CCA 90 bp | GGCCCAGTACTCAGGTTCAGGCAACCTAAACAACAATGTAACAGCATGGTAACATTCCTGGAGGAATGGTaGCTGATGTTTGGCTTTTCA | + |
Preference number: 4 (lower is better) Translates to: GPVLRFRQPKQQCNSMVTFLEEW*LMFGFS Trigger: TGAAAAGCCAAACATCAGCCACCATTCCTCCAGGAA...TGTTACCATGCTGTTACATTGTTGTTTAGGTTGCCTGAACCTGAGTACTGGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075255.6 |
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CDS-3UTR CCA 90 bp | GGCCCAGTACTCAGGTTCAGGCAACCTAAACAACAATGTAACAGCATGGTAACATTGTTCCTGGAGGAATaGTGGCTGATGTTTGGCTTT | + |
Preference number: 4 (lower is better) Translates to: GPVLRFRQPKQQCNSMVTLFLEE*WLMFGF Trigger: AAAGCCAAACATCAGCCACCATTCCTCCAGGAACAA...TGTTACCATGCTGTTACATTGTTGTTTAGGTTGCCTGAACCTGAGTACTGGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075255.6 |
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CDS-3UTR CCA 90 bp | TTGCCTGTTGTTCCAATGGACATGTCATCCAGACAAAAACAGGGAAGAAATGGACCCAGGAAATCAAGGTaGCTGAAATTCTCCAGCATC | + |
Preference number: 4 (lower is better) Translates to: LPVVPMDMSSRQKQGRNGPRKSR*LKFSSI Trigger: GATGCTGGAGAATTTCAGCCACCTTGATTTCCTGGG...TCCATTTCTTCCCTGTTTTTGTCTGGATGACATGTCCATTGGAACAACAGGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223682.2 |
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CDS-3UTR CCA 90 bp | GCAGGCACCAATGCAGATCATTTCACCAAAGTCCATCTTGGTGAGAAATGTGAGCCAATAAAATGTCCCTaGAGTACAGAAAGTGTTGCC | + |
Preference number: 4 (lower is better) Translates to: AGTNADHFTKVHLGEKCEPIKCP*STESVA Trigger: GGCAACACTTTCTGTACTCCAGGGACATTTTATTGG...CTCACATTTCTCACCAAGATGGACTTTGGTGAAATGATCTGCATTGGTGCCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075255.6 |
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3UTR CAA 72 bp | ACCACAACAACAGATACAGAGGTACAGGAAGTGCTATaGGATGGTTGGTTCAGGTCCAAGTTTATTGTGGGT | + |
Preference number: 4 (lower is better) Translates to: TTTTDTEVQEVL*DGWFRSKFIVG Trigger: ACCCACAATAAACTTGGACCTGAACCAACCATCCAATAGCACTTCCTGTACCTCTGTATCTGTTGTTGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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CDS-3UTR GCA 90 bp | GGAATTAGGGATAGGGGGTTTCCTCAGGAACATGTCTTTGTTGTGCACTTATCCCTCTCTAGTATGAACTaGTCTGTGTCTCCTAAGAAA | + |
Preference number: 4 (lower is better) Translates to: GIRDRGFPQEHVFVVHLSLSSMN*SVSPKK Trigger: TTTCTTAGGAGACACAGAGCAGTTCATACTAGAGAG...GGATAAGTGCACAACAAAGACATGTTCCTGAGGAAACCCCCTATCCCTAATTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075255.6 |
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CDS-3UTR CCA 90 bp | CTTGTGCTGAAACAGGGAAGTATTAGAAGACAAGGCTTTTTCCCCATTGTTCACTTCCTGGAGGAATGGTaGCTGATGTTTGGCTTTTCA | + |
Preference number: 4 (lower is better) Translates to: LVLKQGSIRRQGFFPIVHFLEEW*LMFGFS Trigger: TGAAAAGCCAAACATCAGCCACCATTCCTCCAGGAA...GTGAACAATGGGGAAAAAGCCTTGTCTTCTAATACTTCCCTGTTTCAGCACAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000225778.2 |
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CDS-3UTR TCA 90 bp | TTGTGTTTTCATTGCTGGAGCTTATCTGGGAGAAGATTTACCACCGCAACAATGCAGTATGAACTGTCTTaGACTTGTCTCATTGCCTGT | + |
Preference number: 4 (lower is better) Translates to: LCFHCWSLSGRRFTTATMQYELS*TCLIAC Trigger: ACAGGCAATGAGACAAGTTCAAGACAGTTCATACTG...CATTGTTGCGGTGGTAAATCTTCTCCCAGATAAGCTCCAGCAATGAAAACACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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CDS-3UTR TCA 90 bp | CCTTTAGGAATTAGGGATAGGGGGTTTCCTCAGGAACATGTCTTTGTTGTGCACTCTATGGAATGGATTTaGTGTCTTTTCAGGGATGTA | + |
Preference number: 4 (lower is better) Translates to: PLGIRDRGFPQEHVFVVHSMEWI*CLFRDV Trigger: TACATCCCTGAAAAGACATCAAATCCATTCCATAGA...GTGCACAACAAAGACATGTTCCTGAGGAAACCCCCTATCCCTAATTCCTAAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075255.6 |
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CDS-3UTR TCA 90 bp | CTGAAACAGGGAAGTATTAGAAGACAAGGCTTTTTCCCCATTGTTCACACTTCTGGTTTCTCTTCAATGTaGACTGCTTTGTGTCTCCTG | + |
Preference number: 4 (lower is better) Translates to: LKQGSIRRQGFFPIVHTSGFSSM*TALCLL Trigger: CAGGAGACACAAAGCAGTTCACATTGAAGAGAAACC...AGAAGTGTGAACAATGGGGAAAAAGCCTTGTCTTCTAATACTTCCCTGTTTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225778.2 |
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CDS-3UTR GCA 90 bp | CCCACTTACATATCTCTTTCTGCCAAGTTAGATGTCATTTCCCCAGGAGGTCTTGAAGATCCTTGGTTTTaGTCCAGAAATGTTACCAAG | + |
Preference number: 4 (lower is better) Translates to: PTYISLSAKLDVISPGGLEDPWF*SRNVTK Trigger: CTTGGTAACATTTCTGGAGCAAAACCAAGGATCTTC...AAGACCTCCTGGGGAAATGACATCTAACTTGGCAGAAAGAGATATGTAAGTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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CDS-3UTR CCA 90 bp | TTGTGTTTTCATTGCTGGAGCTTATCTGGGAGAAGATTTACCACCGCAACAATGACACCCGAAGATCCTTaGTTTTGCTCCAGAAATGTT | + |
Preference number: 4 (lower is better) Translates to: LCFHCWSLSGRRFTTATMTPEDP*FCSRNV Trigger: AACATTTCTGGAGCAAAACCAAGGATCTTCGGGTGT...CATTGTTGCGGTGGTAAATCTTCTCCCAGATAAGCTCCAGCAATGAAAACACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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CDS-3UTR CCA 90 bp | CTTGTGCTGAAACAGGGAAGTATTAGAAGACAAGGCTTTTTCCCCATTGTTCACACACCCGAAGATCCTTaGTTTTGCTCCAGAAATGTT | + |
Preference number: 4 (lower is better) Translates to: LVLKQGSIRRQGFFPIVHTPEDP*FCSRNV Trigger: AACATTTCTGGAGCAAAACCAAGGATCTTCGGGTGT...GTGAACAATGGGGAAAAAGCCTTGTCTTCTAATACTTCCCTGTTTCAGCACAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057241.15 ENSMUST00000225778.2 |
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CDS-3UTR CCA 90 bp | AACAGGGAAGTATTAGAAGACAAGGCTTTTTCCCCATTGTTCACACTTCTATGGTTGTTCCTGGAGGAATaGTGGCTGATGTTTGGCTTT | + |
Preference number: 4 (lower is better) Translates to: NREVLEDKAFSPLFTLLWLFLEE*WLMFGF Trigger: AAAGCCAAACATCAGCCACCATTCCTCCAGGAACAA...CCATAGAAGTGTGAACAATGGGGAAAAAGCCTTGTCTTCTAATACTTCCCTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225778.2 |
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3UTR CAA 72 bp | AGTCTAGGTGCACAGCATGTATTCATATTAACGCTGTaGTGTTTTCATTGCTGGAGCTTATCTGGGAGAAGA | + |
Preference number: 4 (lower is better) Translates to: SLGAQHVFILTL*CFHCWSLSGRR Trigger: TCTTCTCCCAGATAAGCTCCAGCAATGAAAACACAACAGCGTTAATATGAATACATGCTGTGCACCTAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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CDS-3UTR TCA 90 bp | GGTCCAAGTTTATTGTGGGTAACTACACAAAACAGTTTTACTGACTTCTATAGTTGGAGGAATGGTGGCTaGTGTTTGGCTTTTCACACC | + |
Preference number: 4 (lower is better) Translates to: GPSLLWVTTQNSFTDFYSWRNGG*CLAFHT Trigger: GGTGTGAAAAGCCAAACATCAGCCACCATTCCTCCA...ACTATAGAAGTCAGTAAAACTGTTTTGTGTAGTTACCCACAATAAACTTGGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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CDS-3UTR TCA 90 bp | GAATCAATTCCTTTATGCTGGTTAAGAAAGAAAGCAGAGGAAAATACTTTCCCATGGAGGAATGGTGGCTaGTGTTTGGCTTTTCACACC | + |
Preference number: 4 (lower is better) Translates to: ESIPLCWLRKKAEENTFPWRNGG*CLAFHT Trigger: GGTGTGAAAAGCCAAACATCAGCCACCATTCCTCCA...TGGGAAAGTATTTTCCTCTGCTTTCTTTCTTAACCAGCATAAAGGAATTGATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000180580.9 ENSMUST00000225479.2 |
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CDS-3UTR GCA 90 bp | GTTGTGTTTTCATTGCTGGAGCTTATCTGGGAGAAGATTTACCACCGCAACAATGAAGATCCTTGGTTTTaGTCCAGAAATGTTACCAAG | + |
Preference number: 4 (lower is better) Translates to: VVFSLLELIWEKIYHRNNEDPWF*SRNVTK Trigger: CTTGGTAACATTTCTGGAGCAAAACCAAGGATCTTC...ATTGTTGCGGTGGTAAATCTTCTCCCAGATAAGCTCCAGCAATGAAAACACAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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CDS-3UTR CCA 90 bp | TCTCCGGAATCAATTCCTTTATGCTGGTTAAGAAAGAAAGCAGAGGAAAATACTCCCAGGAAATCAAGGTaGCTGAAATTCTCCAGCATC | + |
Preference number: 4 (lower is better) Translates to: SPESIPLCWLRKKAEENTPRKSR*LKFSSI Trigger: GATGCTGGAGAATTTCAGCCACCTTGATTTCCTGGG...AGTATTTTCCTCTGCTTTCTTTCTTAACCAGCATAAAGGAATTGATTCCGGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180580.9 ENSMUST00000225479.2 |
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CDS-3UTR CCA 90 bp | GGAATTAGGGATAGGGGGTTTCCTCAGGAACATGTCTTTGTTGTGCACTTATCCCATGGGAAATGTCTATaGAATGGATTTGATGTCTTT | + |
Preference number: 4 (lower is better) Translates to: GIRDRGFPQEHVFVVHLSHGKCL*NGFDVF Trigger: AAAGACATCAAATCCATTCCATAGACATTTCCCATG...GGATAAGTGCACAACAAAGACATGTTCCTGAGGAAACCCCCTATCCCTAATTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075255.6 |
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CDS-3UTR CCA 90 bp | CTACACAAAACAGTTTTACTGACTTCTATAGTGATTGGTTTCCAAGAGCAGAGACACCTGGAGGAATGGTaGCTGATGTTTGGCTTTTCA | + |
Preference number: 4 (lower is better) Translates to: LHKTVLLTSIVIGFQEQRHLEEW*LMFGFS Trigger: TGAAAAGCCAAACATCAGCCACCATTCCTCCAGGTG...TCTCTGCTCTTGGAAACCAATCACTATAGAAGTCAGTAAAACTGTTTTGTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000180580.9 |
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CDS-3UTR CCA 90 bp | TTAAATTCATTGCCTGTTGTTCCAATGGACATGTCATCCAGACAAAAACAGGGATACCTGGAGGAATGGTaGCTGATGTTTGGCTTTTCA | + |
Preference number: 4 (lower is better) Translates to: LNSLPVVPMDMSSRQKQGYLEEW*LMFGFS Trigger: TGAAAAGCCAAACATCAGCCACCATTCCTCCAGGTA...TCCCTGTTTTTGTCTGGATGACATGTCCATTGGAACAACAGGCAATGAATTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223682.2 |
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CDS-3UTR CCA 90 bp | TTAAATTCATTGCCTGTTGTTCCAATGGACATGTCATCCAGACAAAAACAGGGAACACCCGAAGATCCTTaGTTTTGCTCCAGAAATGTT | + |
Preference number: 4 (lower is better) Translates to: LNSLPVVPMDMSSRQKQGTPEDP*FCSRNV Trigger: AACATTTCTGGAGCAAAACCAAGGATCTTCGGGTGT...TCCCTGTTTTTGTCTGGATGACATGTCCATTGGAACAACAGGCAATGAATTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223682.2 |
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CDS-3UTR CCA 90 bp | TCTCCGGAATCAATTCCTTTATGCTGGTTAAGAAAGAAAGCAGAGGAAAATACTTTCCTGGAGGAATGGTaGCTGATGTTTGGCTTTTCA | + |
Preference number: 4 (lower is better) Translates to: SPESIPLCWLRKKAEENTFLEEW*LMFGFS Trigger: TGAAAAGCCAAACATCAGCCACCATTCCTCCAGGAA...AGTATTTTCCTCTGCTTTCTTTCTTAACCAGCATAAAGGAATTGATTCCGGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225479.2 |
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3UTR CAA 72 bp | TCTTACAAAACCCATAAGAGACATTATTACAGGCGCTaGGGTGACCCTGCTGGGAAAAACAATAGTAACTAT | + |
Preference number: 4 (lower is better) Translates to: SYKTHKRHYYRR*GDPAGKNNSNY Trigger: ATAGTTACTATTGTTTTTCCCAGCAGGGTCACCCAAGCGCCTGTAATAATGTCTCTTATGGGTTTTGTAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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CDS-3UTR CCA 90 bp | TCTCCGGAATCAATTCCTTTATGCTGGTTAAGAAAGAAAGCAGAGGAAAATACTACACCCGAAGATCCTTaGTTTTGCTCCAGAAATGTT | + |
Preference number: 4 (lower is better) Translates to: SPESIPLCWLRKKAEENTTPEDP*FCSRNV Trigger: AACATTTCTGGAGCAAAACCAAGGATCTTCGGGTGT...AGTATTTTCCTCTGCTTTCTTTCTTAACCAGCATAAAGGAATTGATTCCGGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000180580.9 ENSMUST00000225479.2 |
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CDS-3UTR CCA 90 bp | GAATCAATTCCTTTATGCTGGTTAAGAAAGAAAGCAGAGGAAAATACTTTCCCATTGTTCCTGGAGGAATaGTGGCTGATGTTTGGCTTT | + |
Preference number: 4 (lower is better) Translates to: ESIPLCWLRKKAEENTFPLFLEE*WLMFGF Trigger: AAAGCCAAACATCAGCCACCATTCCTCCAGGAACAA...TGGGAAAGTATTTTCCTCTGCTTTCTTTCTTAACCAGCATAAAGGAATTGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225479.2 |
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3UTR CAA 72 bp | AAGTGCTATTGGATGGTTGGTTCAGGTCCAAGTTTATaGTGGGTAACTACACAAAACAGTTTTACTGACTTC | + |
Preference number: 4 (lower is better) Translates to: KCYWMVGSGPSL*WVTTQNSFTDF Trigger: GAAGTCAGTAAAACTGTTTTGTGTAGTTACCCACAATAAACTTGGACCTGAACCAACCATCCAATAGCACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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CDS-3UTR GCA 90 bp | GTGATTGTTAAATTCATTGCCTGTTGTTCCAATGGACATGTCATCCAGACAAAAGAAGATCCTTGGTTTTaGTCCAGAAATGTTACCAAG | + |
Preference number: 4 (lower is better) Translates to: VIVKFIACCSNGHVIQTKEDPWF*SRNVTK Trigger: CTTGGTAACATTTCTGGAGCAAAACCAAGGATCTTC...TTTTGTCTGGATGACATGTCCATTGGAACAACAGGCAATGAATTTAACAATCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223682.2 |
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CDS-3UTR GCA 90 bp | TCTCCGGAATCAATTCCTTTATGCTGGTTAAGAAAGAAAGCAGAGGAAAATACTGAAGATCCTTGGTTTTaGTCCAGAAATGTTACCAAG | + |
Preference number: 4 (lower is better) Translates to: SPESIPLCWLRKKAEENTEDPWF*SRNVTK Trigger: CTTGGTAACATTTCTGGAGCAAAACCAAGGATCTTC...AGTATTTTCCTCTGCTTTCTTTCTTAACCAGCATAAAGGAATTGATTCCGGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000180580.9 ENSMUST00000225479.2 |
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CDS-3UTR CCA 90 bp | AATAGTTTTTATATCTCATACATAGGTGCCTATTCCAGGAGCAGTTTATACCACACACCCGAAGATCCTTaGTTTTGCTCCAGAAATGTT | + |
Preference number: 4 (lower is better) Translates to: NSFYISYIGAYSRSSLYHTPEDP*FCSRNV Trigger: AACATTTCTGGAGCAAAACCAAGGATCTTCGGGTGT...GTGGTATAAACTGCTCCTGGAATAGGCACCTATGTATGAGATATAAAAACTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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CDS-3UTR CCA 90 bp | GAATCAATTCCTTTATGCTGGTTAAGAAAGAAAGCAGAGGAAAATACTTTCCCAACACCCGAAGATCCTTaGTTTTGCTCCAGAAATGTT | + |
Preference number: 4 (lower is better) Translates to: ESIPLCWLRKKAEENTFPTPEDP*FCSRNV Trigger: AACATTTCTGGAGCAAAACCAAGGATCTTCGGGTGT...TGGGAAAGTATTTTCCTCTGCTTTCTTTCTTAACCAGCATAAAGGAATTGATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000180580.9 ENSMUST00000225479.2 |
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CDS-3UTR GCA 90 bp | CCTATTACAGTATGTGCATTTGTTGCTATGAAAATGATGATGGTACACATACACGAAGATCCTTGGTTTTaGTCCAGAAATGTTACCAAG | + |
Preference number: 4 (lower is better) Translates to: PITVCAFVAMKMMMVHIHEDPWF*SRNVTK Trigger: CTTGGTAACATTTCTGGAGCAAAACCAAGGATCTTC...GTGTATGTGTACCATCATCATTTTCATAGCAACAAATGCACATACTGTAATAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075255.6 ENSMUST00000180580.9 |
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CDS TCA 90 bp | TGTGTCTCCTGGAGGCACGGTGCCTGCTCTTTGTCGTTTCACACCTaGAGACGCTTGGTTTCGCTCCAGACATGTTACCAAGTATGGCTT | + |
Preference number: 5 (lower is better) Translates to: CVSWRHGACSLSFHT*RRLVSLQTCYQVWL Trigger: AAGCCATACTTGGTAACATGTCTGGAGCGAAACCAAGCGTCTTCAGGTGTGAAACGACAAAGAGCAGGCACCGTGCCTCCAGGAGACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225778.2 |
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CDS TCA 90 bp | TACCAAGTATGGCTTAGTGACGGCAAGACCTGGAGGAATGGTGGCTaGTGTTTGGCTTTTCACACCCGAAGATCCTTGGTTTTGCTCCAG | + |
Preference number: 5 (lower is better) Translates to: YQVWLSDGKTWRNGG*CLAFHTRRSLVLLQ Trigger: CTGGAGCAAAACCAAGGATCTTCGGGTGTGAAAAGCCAAACATCAGCCACCATTCCTCCAGGTCTTGCCGTCACTAAGCCATACTTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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CDS TCA 90 bp | TGTTATTCCTGGAGGCACGGTGCCTGCTCTTTGTCGTTTCACACCTaGAGACGCTTGGTTTCGCTCCAGACATGTTACCAAGTATGGCTT | + |
Preference number: 5 (lower is better) Translates to: CYSWRHGACSLSFHT*RRLVSLQTCYQVWL Trigger: AAGCCATACTTGGTAACATGTCTGGAGCGAAACCAAGCGTCTTCAGGTGTGAAACGACAAAGAGCAGGCACCGTGCCTCCAGGAATAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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CDS-3UTR CAA 90 bp | TTCCATGTCCCTTCAGTTGGGAGGCACAGGCAAACATTTTGCCACACTCTTCAGCTTGAACTTGTCTCATaGCCTGTTATTCCTGGAGGC | + |
Preference number: 5 (lower is better) Translates to: FHVPSVGRHRQTFCHTLQLELVS*PVIPGG Trigger: GCCTCCAGGAATAACAGGCAATGAGACAAGTTCAAG...CTGAAGAGTGTGGCAAAATGTTTGCCTGTGCCTCCCAACTGAAGGGACATGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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CDS TCA 90 bp | GTGATTGTTAAATTCATTGCCTGTTGTTCCTGGAGGAATGGTGGCTaGTGTTTGGCTTTTCACACCCGAAGATCCTTGGTTTTGCTCCAG | + |
Preference number: 5 (lower is better) Translates to: VIVKFIACCSWRNGG*CLAFHTRRSLVLLQ Trigger: CTGGAGCAAAACCAAGGATCTTCGGGTGTGAAAAGCCAAACATCAGCCACCATTCCTCCAGGAACAACAGGCAATGAATTTAACAATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075255.6 ENSMUST00000225479.2 ENSMUST00000225778.2 |
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CDS CCA 90 bp | TTAAATTCATTGCCTGTTGTTCCTGGAGGAATGGTGGCTGATGTTTaGCTTTTCACACCCGAAGATCCTTGGTTTTGCTCCAGAAATGTT | + |
Preference number: 5 (lower is better) Translates to: LNSLPVVPGGMVADV*LFTPEDPWFCSRNV Trigger: AACATTTCTGGAGCAAAACCAAGGATCTTCGGGTGTGAAAAGCCAAACATCAGCCACCATTCCTCCAGGAACAACAGGCAATGAATTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075255.6 ENSMUST00000225479.2 ENSMUST00000225778.2 |
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CDS CCA 72 bp | AGACGCTTGGTTTCGCTCCAGACATGTTACCAAGTATaGCTTAGTGACGGCAAGACCTGGAGGAATGGTGGC | + |
Preference number: 6 (lower is better) Translates to: RRLVSLQTCYQV*LSDGKTWRNGG Trigger: GCCACCATTCCTCCAGGTCTTGCCGTCACTAAGCCATACTTGGTAACATGTCTGGAGCGAAACCAAGCGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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CDS TCA 72 bp | TGGCTTAGTGACGGCAAGACCTGGAGGAATGGTGGCTaGTGTTTGGCTTTTCACACCCGAAGATCCTTGGTT | + |
Preference number: 6 (lower is better) Translates to: WLSDGKTWRNGG*CLAFHTRRSLV Trigger: AACCAAGGATCTTCGGGTGTGAAAAGCCAAACATCAGCCACCATTCCTCCAGGTCTTGCCGTCACTAAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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CDS CCA 72 bp | TTGCCTGTTGTTCCTGGAGGAATGGTGGCTGATGTTTaGCTTTTCACACCCGAAGATCCTTGGTTTTGCTCC | + |
Preference number: 6 (lower is better) Translates to: LPVVPGGMVADV*LFTPEDPWFCS Trigger: GGAGCAAAACCAAGGATCTTCGGGTGTGAAAAGCCAAACATCAGCCACCATTCCTCCAGGAACAACAGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075255.6 ENSMUST00000225479.2 ENSMUST00000225778.2 |
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CDS CAA 72 bp | TTTCTCTCCAGTATGAACTGTCTTGAACTTGTCTCATaGCCTGTTATTCCTGGAGGCACGGTGCCTGCTCTT | + |
Preference number: 6 (lower is better) Translates to: FLSSMNCLELVS*PVIPGGTVPAL Trigger: AAGAGCAGGCACCGTGCCTCCAGGAATAACAGGCAATGAGACAAGTTCAAGACAGTTCATACTGGAGAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057241.15 |
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CDS TCA 72 bp | AAATTCATTGCCTGTTGTTCCTGGAGGAATGGTGGCTaGTGTTTGGCTTTTCACACCCGAAGATCCTTGGTT | + |
Preference number: 6 (lower is better) Translates to: KFIACCSWRNGG*CLAFHTRRSLV Trigger: AACCAAGGATCTTCGGGTGTGAAAAGCCAAACATCAGCCACCATTCCTCCAGGAACAACAGGCAATGAATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075255.6 ENSMUST00000225479.2 ENSMUST00000225778.2 |
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CDS CCA 72 bp | GTGGCTGATGTTTGGCTTTTCACACCCGAAGATCCTTaGTTTTGCTCCAGAAATGTTACCAAGTATGGTTTA | + |
Preference number: 6 (lower is better) Translates to: VADVWLFTPEDP*FCSRNVTKYGL Trigger: TAAACCATACTTGGTAACATTTCTGGAGCAAAACCAAGGATCTTCGGGTGTGAAAAGCCAAACATCAGCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000057241.15 ENSMUST00000075255.6 ENSMUST00000180580.9 ENSMUST00000223682.2 ENSMUST00000225479.2 ENSMUST00000225778.2 |
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CDS GCA 72 bp | GATGTTTGGCTTTTCACACCCGAAGATCCTTGGTTTTaGTCCAGAAATGTTACCAAGTATGGTTTAGCAACA | + |
Preference number: 6 (lower is better) Translates to: DVWLFTPEDPWF*SRNVTKYGLAT Trigger: TGTTGCTAAACCATACTTGGTAACATTTCTGGAGCAAAACCAAGGATCTTCGGGTGTGAAAAGCCAAACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000057241.15 ENSMUST00000075255.6 ENSMUST00000180580.9 ENSMUST00000223682.2 ENSMUST00000225479.2 ENSMUST00000225778.2 |