Pregenerated sensors for ZFP871 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024298Ensembl transcript IDs: ENSMUST00000057501.9, ENSMUST00000159086.10
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCTGTCTCCTCCAAGATCCAGGACTGCAGATGACTCGACCACACTaGTCGCAGTCACAGGCCCGTTTCTCTTTGATGCATTCCAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: SCLLQDPGLQMTRPH*SQSQARFSLMHSKE Trigger: CTCCTTGGAATGCATCAAAGAGAAACGGGCCTGTGACTGCGAGCAGTGTGGTCGAGTCATCTGCAGTCCTGGATCTTGGAGGAGACAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
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| 3UTR CCA 90 bp | AGGAAGAACCAGAGCCAACTTCTAGAGTGTCTCTATACTCAGCACTaGGGGGACAGACACAAGAAATGCTCCTGCTGCCCAGCTCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: RKNQSQLLECLYTQH*GDRHKKCSCCPAPG Trigger: GCCTGGAGCTGGGCAGCAGGAGCATTTCTTGTGTCTGTCCCCCCAGTGCTGAGTATAGAGACACTCTAGAAGTTGGCTCTGGTTCTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR TCA 90 bp | GGGACAGACACAAGAAATGCTCCTGCTGCCCAGCTCCAGGCTCAGTaGGACTCTGTCTTAGGGGGAATAACAGTGATAGATAGAGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: GTDTRNAPAAQLQAQ*DSVLGGITVIDRAR Trigger: TCTTGCTCTATCTATCACTGTTATTCCCCCTAAGACAGAGTCTCACTGAGCCTGGAGCTGGGCAGCAGGAGCATTTCTTGTGTCTGTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR CCA 90 bp | AGGCAGGAAATGCAAGGAGGGACATCCAGGAGGCAGAAAGGATTCTaGAATAGAGCCAGAGGTAGGAGATTTGCCCAGGAAGATGTAACT | + |
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Preference number: 1 (lower is better) Translates to: RQEMQGGTSRRQKGF*NRARGRRFAQEDVT Trigger: AGTTACATCTTCCTGGGCAAATCTCCTACCTCTGGCTCTATTCCAGAATCCTTTCTGCCTCCTGGATGTCCCTCCTTGCATTTCCTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR GCA 90 bp | TACCGATCAATCAAAAAGCTCATGGGCCGTGACTTAGGCAGGAAATaGAAGGAGGGACATCCAGGAGGCAGAAAGGATTCTGGAATAGAG | + |
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Preference number: 1 (lower is better) Translates to: YRSIKKLMGRDLGRK*KEGHPGGRKDSGIE Trigger: CTCTATTCCAGAATCCTTTCTGCCTCCTGGATGTCCCTCCTTGCATTTCCTGCCTAAGTCACGGCCCATGAGCTTTTTGATTGATCGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR TCA 90 bp | GATACCTTCTGTATTGTACCGATCAATCAAAAAGCTCATGGGCCGTaGCTTAGGCAGGAAATGCAAGGAGGGACATCCAGGAGGCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: DTFCIVPINQKAHGP*LRQEMQGGTSRRQK Trigger: TTTCTGCCTCCTGGATGTCCCTCCTTGCATTTCCTGCCTAAGTCACGGCCCATGAGCTTTTTGATTGATCGGTACAATACAGAAGGTATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR GCA 90 bp | GATCCAGAACACTGTTGTTCACCTCACACAGCTAGACACATCTTCTaGCACTCAAGGACATGTTCCAAGCCTCCAACCAGTGAACAATGT | + |
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Preference number: 1 (lower is better) Translates to: DPEHCCSPHTARHIF*HSRTCSKPPTSEQC Trigger: ACATTGTTCACTGGTTGGAGGCTTGGAACATGTCCTTGAGTGGCAGAAGATGTGTCTAGCTGTGTGAGGTGAACAACAGTGTTCTGGATC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR GCA 90 bp | AGCAACTGTTATGGTTACAAGAGCAGAACTTCAGTTACCCCTCAGTaGATCCAACACAGGGGACACCGAACTACAGAACTAATCCCTTTG | + |
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Preference number: 1 (lower is better) Translates to: SNCYGYKSRTSVTPQ*IQHRGHRTTELIPL Trigger: CAAAGGGATTAGTTCTGTAGTTCGGTGTCCCCTGTGTTGGATGCACTGAGGGGTAACTGAAGTTCTGCTCTTGTAACCATAACAGTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR GCA 90 bp | TATTATTATTACCTGGTAAGGGTGTTTTACCTGCCTGTCTATCTGTaGACCATGCGCATGTCTGATGCCCAGAGATCAGAGGAGGGTGTT | + |
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Preference number: 1 (lower is better) Translates to: YYYYLVRVFYLPVYL*TMRMSDAQRSEEGV Trigger: AACACCCTCCTCTGATCTCTGGGCATCAGACATGCGCATGGTGCACAGATAGACAGGCAGGTAAAACACCCTTACCAGGTAATAATAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR CCA 90 bp | CTGCAGTTCAGTGGTACACCTCTTGCCTACCACATACAAGCTCCTTaGTTCAACCCTGAGCATGGAGGAAAGAAAAATGGAAGCAAAATG | + |
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Preference number: 1 (lower is better) Translates to: LQFSGTPLAYHIQAP*FNPEHGGKKNGSKM Trigger: CATTTTGCTTCCATTTTTCTTTCCTCCATGCTCAGGGTTGAACCAAGGAGCTTGTATGTGGTAGGCAAGAGGTGTACCACTGAACTGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR CCA 90 bp | GATACAACAGGACAGTTGCACCTACTAACTGACAACAGCTGTGACTaGAAATACAAGCGAGACAAAAATGACAGCATGGAGGTGGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: DTTGQLHLLTDNSCD*KYKRDKNDSMEVGG Trigger: ACCTCCCACCTCCATGCTGTCATTTTTGTCTCGCTTGTATTTCCAGTCACAGCTGTTGTCAGTTAGTAGGTGCAACTGTCCTGTTGTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR TCA 90 bp | CACACATCACATTTCTTCTCTCAGAGGACCAGGGATCATTACAGATaGGGGAGCCGAAAGAATGTGAGAGCCAGAGTGAATTATTACAGC | + |
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Preference number: 1 (lower is better) Translates to: HTSHFFSQRTRDHYR*GSRKNVRARVNYYS Trigger: GCTGTAATAATTCACTCTGGCTCTCACATTCTTTCGGCTCCCTCATCTGTAATGATCCCTGGTCCTCTGAGAGAAGAAATGTGATGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR CCA 90 bp | CAAGACACAGCCATGAGTACGGCAAGAATAACCAACCACTGTGACTaGATTTCAGGCCTATTTCACACAACCCACAAGATAAAACCCAAG | + |
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Preference number: 1 (lower is better) Translates to: QDTAMSTARITNHCD*ISGLFHTTHKIKPK Trigger: CTTGGGTTTTATCTTGTGGGTTGTGTGAAATAGGCCTGAAATCCAGTCACAGTGGTTGGTTATTCTTGCCGTACTCATGGCTGTGTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR TCA 90 bp | TGGTACACCTCTTGCCTACCACATACAAGCTCCTTGGTTCAACCCTaGGCATGGAGGAAAGAAAAATGGAAGCAAAATGAAGCCAAATCT | + |
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Preference number: 1 (lower is better) Translates to: WYTSCLPHTSSLVQP*AWRKEKWKQNEAKS Trigger: AGATTTGGCTTCATTTTGCTTCCATTTTTCTTTCCTCCATGCTCAGGGTTGAACCAAGGAGCTTGTATGTGGTAGGCAAGAGGTGTACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR GCA 90 bp | GTGCTCTTGACTGCTCCTATGTTCATAGTCTTAAAAGACCCAAAGTaGCGCACCAAGACTCTTACATCCAATCATTACTTCACCAAAGTA | + |
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Preference number: 1 (lower is better) Translates to: VLLTAPMFIVLKDPK*RTKTLTSNHYFTKV Trigger: TACTTTGGTGAAGTAATGATTGGATGTAAGAGTCTTGGTGCGGCACTTTGGGTCTTTTAAGACTATGAACATAGGAGCAGTCAAGAGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR CCA 90 bp | TTCTTGGTCACCAAGAATTGTTATTGGCAGGAATCTGGATGGAACTaGAGATTGATAGTAAGTTGTCAACTCAGTTCCAAATGGTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: FLVTKNCYWQESGWN*RLIVSCQLSSKWCP Trigger: GGGACACCATTTGGAACTGAGTTGACAACTTACTATCAATCTCCAGTTCCATCCAGATTCCTGCCAATAACAATTCTTGGTGACCAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR GCA 90 bp | TTTATTTTTATGTGTACAAGTGTGTCTCCTGTAACTAGAGTCACATaGAGTTGTGAGCCCTGTGACGTGGTGCTAAAAAGCAAATGCTCT | + |
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Preference number: 1 (lower is better) Translates to: FIFMCTSVSPVTRVT*SCEPCDVVLKSKCS Trigger: AGAGCATTTGCTTTTTAGCACCACGTCACAGGGCTCACAACTGCATGTGACTCTAGTTACAGGAGACACACTTGTACACATAAAAATAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
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| 3UTR CCA 90 bp | AGACTATTCTTGGTCACCAAGAATTGTTATTGGCAGGAATCTGGATaGAACTGGAGATTGATAGTAAGTTGTCAACTCAGTTCCAAATGG | + |
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Preference number: 1 (lower is better) Translates to: RLFLVTKNCYWQESG*NWRLIVSCQLSSKW Trigger: CCATTTGGAACTGAGTTGACAACTTACTATCAATCTCCAGTTCCATCCAGATTCCTGCCAATAACAATTCTTGGTGACCAAGAATAGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR GCA 90 bp | CAAAGCACTCTAGCCTCCATGGGCATATGTCTACATACCCTCACATaGTCACACATAAATACTAAAATGCATTTAAAGACATTTATGTGG | + |
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Preference number: 1 (lower is better) Translates to: QSTLASMGICLHTLT*SHINTKMHLKTFMW Trigger: CCACATAAATGTCTTTAAATGCATTTTAGTATTTATGTGTGAGCATGTGAGGGTATGTAGACATATGCCCATGGAGGCTAGAGTGCTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR TCA 90 bp | AAGTTTTCATCCGATATGTGTTACCATCTGTGCCAAATGAAACCTTaGACATCTCTTTTGAGAAGATTAGCACTCCGGATCAAGTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: KFSSDMCYHLCQMKP*TSLLRRLALRIKFF Trigger: AAAGAACTTGATCCGGAGTGCTAATCTTCTCAAAAGAGATGTTCAAGGTTTCATTTGGCACAGATGGTAACACATATCGGATGAAAACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
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| 3UTR CCA 90 bp | GGATGGAACTGGAGATTGATAGTAAGTTGTCAACTCAGTTCCAAATaGTGTCCCTTCTATATCGAACAGAATCAAAATGTAAACAAACTA | + |
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Preference number: 1 (lower is better) Translates to: GWNWRLIVSCQLSSK*CPFYIEQNQNVNKL Trigger: TAGTTTGTTTACATTTTGATTCTGTTCGATATAGAAGGGACACCATTTGGAACTGAGTTGACAACTTACTATCAATCTCCAGTTCCATCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR CCA 90 bp | GTAGAAAATATAGATATTCAAGGATCCACTGATCACCTCAATACATaGAGAAGTGGACTTCAAAGCTCTATGTTCCCTGATGAAAATATC | + |
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Preference number: 1 (lower is better) Translates to: VENIDIQGSTDHLNT*RSGLQSSMFPDENI Trigger: GATATTTTCATCAGGGAACATAGAGCTTTGAAGTCCACTTCTCCATGTATTGAGGTGATCAGTGGATCCTTGAATATCTATATTTTCTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR CAA 90 bp | GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGCGCCACAGAGTaGGGGGTGGGGGAATATCTTTGGACTCTCATTCATCTGACAAGA | + |
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Preference number: 2 (lower is better) Translates to: ERERERERERERATE*GVGEYLWTLIHLTR Trigger: TCTTGTCAGATGAATGAGAGTCCAAAGATATTCCCCCACCCCCAACTCTGTGGCGCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR-3UTR CCA 90 bp | AAGAGATCCAATTGTGCGGCTGCAGTTCAGTGGTACACCTCTTGCCTACCACATGGAGAACAGACCCACTaGGAAGAAGAAACGGAACCA | + |
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Preference number: 2 (lower is better) Translates to: KRSNCAAAVQWYTSCLPHGEQTH*EEETEP Trigger: TGGTTCCGTTTCTTCTTCCCAGTGGGTCTGTTCTCC...ATGTGGTAGGCAAGAGGTGTACCACTGAACTGCAGCCGCACAATTGGATCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR CAA 90 bp | TGCTGGGAATCAAGCCTCAGTCCTCTAGGAAAAGAGCCAGTGCTCTaGACTGCTCCTATGTTCATAGTCTTAAAAGACCCAAAGTGCCGC | + |
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Preference number: 2 (lower is better) Translates to: CWESSLSPLGKEPVL*TAPMFIVLKDPKCR Trigger: GCGGCACTTTGGGTCTTTTAAGACTATGAACATAGGAGCAGTCAAGAGCACTGGCTCTTTTCCTAGAGGACTGAGGCTTGATTCCCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR-3UTR CCA 90 bp | AAGAGATCCAATTGTGCGGCTGCAGTTCAGTGGTACACCTCTTGCCTACCACATAGGCAGAAAGGATTCTaGAATAGAGCCAGAGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: KRSNCAAAVQWYTSCLPHRQKGF*NRARGR Trigger: CCTACCTCTGGCTCTATTCCAGAATCCTTTCTGCCT...ATGTGGTAGGCAAGAGGTGTACCACTGAACTGCAGCCGCACAATTGGATCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR-3UTR TCA 90 bp | AAGAGATCCAATTGTGCGGCTGCAGTTCAGTGGTACACCTCTTGCCTACCACATTATAACACAAACTGGTaGGAATGTACGGCTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: KRSNCAAAVQWYTSCLPHYNTNW*ECTAAP Trigger: AGGAGCAGCCGTACATTCTCACCAGTTTGTGTTATA...ATGTGGTAGGCAAGAGGTGTACCACTGAACTGCAGCCGCACAATTGGATCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR-3UTR GCA 90 bp | AAGAGATCCAATTGTGCGGCTGCAGTTCAGTGGTACACCTCTTGCCTACCACATGCCAGTGCTCTTGACTaGTCCTATGTTCATAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: KRSNCAAAVQWYTSCLPHASALD*SYVHSL Trigger: AAGACTATGAACATAGGAGCAGTCAAGAGCACTGGC...ATGTGGTAGGCAAGAGGTGTACCACTGAACTGCAGCCGCACAATTGGATCTCTT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR-3UTR CCA 90 bp | AAGAGATCCAATTGTGCGGCTGCAGTTCAGTGGTACACCTCTTGCCTACCACATCATATTCAGAGGGAATaGGGAAGCAGAAAGGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: KRSNCAAAVQWYTSCLPHHIQRE*GSRKGF Trigger: AAAGCCCTTTCTGCTTCCCCATTCCCTCTGAATATG...ATGTGGTAGGCAAGAGGTGTACCACTGAACTGCAGCCGCACAATTGGATCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR CAA 90 bp | GAGAGAGAGAGAGCGCGCCACAGAGTTGGGGGTGGGGGAATATCTTaGGACTCTCATTCATCTGACAAGAGATTAACATACAGACAAAAA | + |
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Preference number: 2 (lower is better) Translates to: ERERARHRVGGGGIS*DSHSSDKRLTYRQK Trigger: TTTTTGTCTGTATGTTAATCTCTTGTCAGATGAATGAGAGTCCAAAGATATTCCCCCACCCCCAACTCTGTGGCGCGCTCTCTCTCTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR-3UTR TCA 90 bp | GATAGTAAGTTGTCAACTCAGTTCCAAATGGTGTCCCTTCTATATCGAACAGAACAGCTCCAGGCTCAGTaGGACTCTGTCTTAGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: DSKLSTQFQMVSLLYRTEQLQAQ*DSVLGG Trigger: TCCCCCTAAGACAGAGTCTCACTGAGCCTGGAGCTG...TTCTGTTCGATATAGAAGGGACACCATTTGGAACTGAGTTGACAACTTACTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR-3UTR GCA 90 bp | CACCTACTAACTGACAACAGCTGTGACTGGAAATACAAGCGAGACAAAAATGACGACAGACACAAGAAATaGTCCTGCTGCCCAGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: HLLTDNSCDWKYKRDKNDDRHKK*SCCPAP Trigger: TGGAGCTGGGCAGCAGGAGCATTTCTTGTGTCTGTC...GTCATTTTTGTCTCGCTTGTATTTCCAGTCACAGCTGTTGTCAGTTAGTAGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR-3UTR GCA 90 bp | TGGAGCATCTACACACATCACATTTCTTCTCTCAGAGGACCAGGGATCATTACATCTATCTGTGCACCATaGGCATGTCTGATGCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: WSIYTHHISSLRGPGIITSICAP*ACLMPR Trigger: TCTGGGCATCAGACATGCGCATGGTGCACAGATAGA...TGTAATGATCCCTGGTCCTCTGAGAGAAGAAATGTGATGTGTGTAGATGCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR-3UTR GCA 90 bp | CTGGCAATGTGTATTAGCACGGTCACTCTGGAAAACAGAAGTTTCATCAAAAATAAGAAATGCTCCTGCTaGCCAGCTCCAGGCTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: LAMCISTVTLENRSFIKNKKCSC*PAPGSV Trigger: CACTGAGCCTGGAGCTGGGCAGCAGGAGCATTTCTT...ATTTTTGATGAAACTTCTGTTTTCCAGAGTGACCGTGCTAATACACATTGCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR-3UTR GCA 90 bp | TGGAGCATCTACACACATCACATTTCTTCTCTCAGAGGACCAGGGATCATTACATTTGGTCAGAGAAGCTaGTTTTCCCAGTGGACAGCT | + |
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Preference number: 2 (lower is better) Translates to: WSIYTHHISSLRGPGIITFGQRS*FSQWTA Trigger: AGCTGTCCACTGGGAAAAGCAGCTTCTCTGACCAAA...TGTAATGATCCCTGGTCCTCTGAGAGAAGAAATGTGATGTGTGTAGATGCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR-3UTR CCA 90 bp | AAGAGATCCAATTGTGCGGCTGCAGTTCAGTGGTACACCTCTTGCCTACCACATCAACTCAGTTCCAAATaGTGTCCCTTCTATATCGAA | + |
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Preference number: 2 (lower is better) Translates to: KRSNCAAAVQWYTSCLPHQLSSK*CPFYIE Trigger: TTCGATATAGAAGGGACACCATTTGGAACTGAGTTG...ATGTGGTAGGCAAGAGGTGTACCACTGAACTGCAGCCGCACAATTGGATCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR-3UTR CCA 90 bp | CACCTACTAACTGACAACAGCTGTGACTGGAAATACAAGCGAGACAAAAATGACGTCCCAGAACAACCATaGAGCCACTCCTTCTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: HLLTDNSCDWKYKRDKNDVPEQP*SHSFWF Trigger: AAACCAGAAGGAGTGGCTCCATGGTTGTTCTGGGAC...GTCATTTTTGTCTCGCTTGTATTTCCAGTCACAGCTGTTGTCAGTTAGTAGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR-3UTR TCA 90 bp | ATTCTGGAGGGCTCAGTTCTAAATGGAGCATCTACACACATCACATTTCTTCTCAGGGTTTCTCTCCAGTaGCTCCTTCCACATATTCAG | + |
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Preference number: 2 (lower is better) Translates to: ILEGSVLNGASTHITFLLRVSLQ*LLPHIQ Trigger: CTGAATATGTGGAAGGAGTCACTGGAGAGAAACCCT...GAGAAGAAATGTGATGTGTGTAGATGCTCCATTTAGAACTGAGCCCTCCAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR-3UTR TCA 90 bp | AAGAGATCCAATTGTGCGGCTGCAGTTCAGTGGTACACCTCTTGCCTACCACATAGTTTACAGGAAGTATaGCAAATTGGGAATGGACAT | + |
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Preference number: 2 (lower is better) Translates to: KRSNCAAAVQWYTSCLPHSLQEV*QIGNGH Trigger: ATGTCCATTCCCAATTTGTCATACTTCCTGTAAACT...ATGTGGTAGGCAAGAGGTGTACCACTGAACTGCAGCCGCACAATTGGATCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCATCTACACACATCACATTTCTTCTCTCAGAGGACCAGGGATCATTACATCCTTGGTTCAACCCTaGGCATGGAGGAAAGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: WSIYTHHISSLRGPGIITSLVQP*AWRKEK Trigger: TTTTTCTTTCCTCCATGCTCAGGGTTGAACCAAGGA...TGTAATGATCCCTGGTCCTCTGAGAGAAGAAATGTGATGTGTGTAGATGCTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR-3UTR GCA 90 bp | TGGAGCATCTACACACATCACATTTCTTCTCTCAGAGGACCAGGGATCATTACACATTGCTCAATGCTCTaGTCACTGCTTGCTTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: WSIYTHHISSLRGPGIITHCSML*SLLAFV Trigger: TACAAAAGCAAGCAGTGAGCAGAGCATTGAGCAATG...TGTAATGATCCCTGGTCCTCTGAGAGAAGAAATGTGATGTGTGTAGATGCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR-3UTR GCA 90 bp | CATGATGCCAAAACCAGGAAGGGCTCAACAACAAAGAAAACTATAACACAATTTGCCGCCATTCCACATTaGTCAATGCTCTGCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: HDAKTRKGSTTKKTITQFAAIPH*SMLCSL Trigger: CAGTGAGCAGAGCATTGAGCAATGTGGAATGGCGGC...AAATTGTGTTATAGTTTTCTTTGTTGTTGAGCCCTTCCTGGTTTTGGCATCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR-3UTR GCA 90 bp | GATAGTAAGTTGTCAACTCAGTTCCAAATGGTGTCCCTTCTATATCGAACAGAAGGGAGCCACTTGCTGTaGAGTCATAAGGACTCAAGT | + |
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Preference number: 2 (lower is better) Translates to: DSKLSTQFQMVSLLYRTEGSHLL*SHKDSS Trigger: ACTTGAGTCCTTATGACTGCACAGCAAGTGGCTCCC...TTCTGTTCGATATAGAAGGGACACCATTTGGAACTGAGTTGACAACTTACTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR-3UTR CCA 90 bp | GATAGTAAGTTGTCAACTCAGTTCCAAATGGTGTCCCTTCTATATCGAACAGAAGTGGACAGCTGTCAATaGAGTGATGCACAACTGGTC | + |
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Preference number: 2 (lower is better) Translates to: DSKLSTQFQMVSLLYRTEVDSCQ*SDAQLV Trigger: GACCAGTTGTGCATCACTCCATTGACAGCTGTCCAC...TTCTGTTCGATATAGAAGGGACACCATTTGGAACTGAGTTGACAACTTACTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR-3UTR CCA 90 bp | CATGATGCCAAAACCAGGAAGGGCTCAACAACAAAGAAAACTATAACACAATTTCTAAGGGAGTCTACTTaGGAGAACAGACCCACTGGG | + |
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Preference number: 2 (lower is better) Translates to: HDAKTRKGSTTKKTITQFLREST*ENRPTG Trigger: CCCAGTGGGTCTGTTCTCCCAAGTAGACTCCCTTAG...AAATTGTGTTATAGTTTTCTTTGTTGTTGAGCCCTTCCTGGTTTTGGCATCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR-3UTR TCA 90 bp | GCAAAAGTTTTCATCCGATATGTGTTACCATCTGTGCCAAATGAAACCTTGAACAGGGTTTCTCTCCAGTaGCTCCTTCCACATATTCAG | + |
|
Preference number: 2 (lower is better) Translates to: AKVFIRYVLPSVPNETLNRVSLQ*LLPHIQ Trigger: CTGAATATGTGGAAGGAGTCACTGGAGAGAAACCCT...GTTCAAGGTTTCATTTGGCACAGATGGTAACACATATCGGATGAAAACTTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| 3UTR-3UTR GCA 90 bp | ACACCACCAACCATACCAGCAACACATAAACAATGCCCTCCAAACACACTCGTCCTACATACCCTCACATaGTCACACATAAATACTAAA | + |
|
Preference number: 2 (lower is better) Translates to: TPPTIPATHKQCPPNTLVLHTLT*SHINTK Trigger: TTTAGTATTTATGTGTGAGCATGTGAGGGTATGTAG...GACGAGTGTGTTTGGAGGGCATTGTTTATGTGTTGCTGGTATGGTTGGTGGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR CCA 90 bp | ATTCTGGAGGGCTCAGTTCTAAATGGAGCATCTACACACATCACATTTCTTCTCTCATGCCAAAGAAGATaGCACTGCACCCATGTATAT | + |
|
Preference number: 2 (lower is better) Translates to: ILEGSVLNGASTHITFLLSCQRR*HCTHVY Trigger: ATATACATGGGTGCAGTGCCATCTTCTTTGGCATGA...GAGAAGAAATGTGATGTGTGTAGATGCTCCATTTAGAACTGAGCCCTCCAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR TCA 90 bp | CACCTACTAACTGACAACAGCTGTGACTGGAAATACAAGCGAGACAAAAATGACTTTCTCTTATTTCTATaGAAACCACAAAGCGGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: HLLTDNSCDWKYKRDKNDFLLFL*KPQSGG Trigger: TCCCCCGCTTTGTGGTTTTCATAGAAATAAGAGAAA...GTCATTTTTGTCTCGCTTGTATTTCCAGTCACAGCTGTTGTCAGTTAGTAGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR TCA 90 bp | GATAGTAAGTTGTCAACTCAGTTCCAAATGGTGTCCCTTCTATATCGAACAGAATTATTTCTGGGAACATaGTGCTGGGAGGAAGAACCA | + |
|
Preference number: 2 (lower is better) Translates to: DSKLSTQFQMVSLLYRTELFLGT*CWEEEP Trigger: TGGTTCTTCCTCCCAGCATCATGTTCCCAGAAATAA...TTCTGTTCGATATAGAAGGGACACCATTTGGAACTGAGTTGACAACTTACTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR TCA 90 bp | CACCTACTAACTGACAACAGCTGTGACTGGAAATACAAGCGAGACAAAAATGACGGACTCTCATTCATCTaGCAAGAGATTAACATACAG | + |
|
Preference number: 2 (lower is better) Translates to: HLLTDNSCDWKYKRDKNDGLSFI*QEINIQ Trigger: CTGTATGTTAATCTCTTGTCAGATGAATGAGAGTCC...GTCATTTTTGTCTCGCTTGTATTTCCAGTCACAGCTGTTGTCAGTTAGTAGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR GCA 90 bp | GATAGTAAGTTGTCAACTCAGTTCCAAATGGTGTCCCTTCTATATCGAACAGAATTCCACATTGCTCAATaGTCTGCTCACTGCTTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: DSKLSTQFQMVSLLYRTEFHIAQ*SAHCLL Trigger: AAGCAAGCAGTGAGCAGAGCATTGAGCAATGTGGAA...TTCTGTTCGATATAGAAGGGACACCATTTGGAACTGAGTTGACAACTTACTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR CCA 90 bp | GCAAAAGTTTTCATCCGATATGTGTTACCATCTGTGCCAAATGAAACCTTGAACCATATTCAGAGGGAATaGGGAAGCAGAAAGGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: AKVFIRYVLPSVPNETLNHIQRE*GSRKGF Trigger: AAAGCCCTTTCTGCTTCCCCATTCCCTCTGAATATG...GTTCAAGGTTTCATTTGGCACAGATGGTAACACATATCGGATGAAAACTTTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| 3UTR-3UTR CCA 90 bp | CATGATGCCAAAACCAGGAAGGGCTCAACAACAAAGAAAACTATAACACAATTTGTACCTCCAACTCACTaGTGGACTAATCACACAGCA | + |
|
Preference number: 2 (lower is better) Translates to: HDAKTRKGSTTKKTITQFVPPTH*WTNHTA Trigger: TGCTGTGTGATTAGTCCACCAGTGAGTTGGAGGTAC...AAATTGTGTTATAGTTTTCTTTGTTGTTGAGCCCTTCCTGGTTTTGGCATCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR CCA 90 bp | CACCTACTAACTGACAACAGCTGTGACTGGAAATACAAGCGAGACAAAAATGACGGAAGTATGACAAATTaGGAATGGACATTAGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: HLLTDNSCDWKYKRDKNDGSMTN*EWTLEA Trigger: AGCCTCTAATGTCCATTCCCAATTTGTCATACTTCC...GTCATTTTTGTCTCGCTTGTATTTCCAGTCACAGCTGTTGTCAGTTAGTAGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR CAA 90 bp | TTGTTATTGGCAGGAATCTGGATGGAACTGGAGATTGATAGTAAGTaGTCAACTCAGTTCCAAATGGTGTCCCTTCTATATCGAACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LLLAGIWMELEIDSK*STQFQMVSLLYRTE Trigger: TTCTGTTCGATATAGAAGGGACACCATTTGGAACTGAGTTGACAACTTACTATCAATCTCCAGTTCCATCCAGATTCCTGCCAATAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR TCA 90 bp | CACCTACTAACTGACAACAGCTGTGACTGGAAATACAAGCGAGACAAAAATGACTGCCAAATGAAACCTTaGACATCTCTTTTGAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: HLLTDNSCDWKYKRDKNDCQMKP*TSLLRR Trigger: TCTTCTCAAAAGAGATGTTCAAGGTTTCATTTGGCA...GTCATTTTTGTCTCGCTTGTATTTCCAGTCACAGCTGTTGTCAGTTAGTAGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR GCA 90 bp | CACCTACTAACTGACAACAGCTGTGACTGGAAATACAAGCGAGACAAAAATGACGCTCTGCTCACTGCTTaGTTTTGTAGAGTAAAATTT | + |
|
Preference number: 2 (lower is better) Translates to: HLLTDNSCDWKYKRDKNDALLTA*FCRVKF Trigger: AAATTTTACTCTACAAAAGCAAGCAGTGAGCAGAGC...GTCATTTTTGTCTCGCTTGTATTTCCAGTCACAGCTGTTGTCAGTTAGTAGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR GCA 90 bp | CACCTACTAACTGACAACAGCTGTGACTGGAAATACAAGCGAGACAAAAATGACCCCAATATATTACTTTaGTCACTTTGTGAACACCAC | + |
|
Preference number: 2 (lower is better) Translates to: HLLTDNSCDWKYKRDKNDPNILL*SLCEHH Trigger: GTGGTGTTCACAAAGTGAGCAAAGTAATATATTGGG...GTCATTTTTGTCTCGCTTGTATTTCCAGTCACAGCTGTTGTCAGTTAGTAGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR GCA 90 bp | CTGGCAATGTGTATTAGCACGGTCACTCTGGAAAACAGAAGTTTCATCAAAAATCATAGCAAATGTGACTaGATGCACAAGGCCTACATT | + |
|
Preference number: 2 (lower is better) Translates to: LAMCISTVTLENRSFIKNHSKCD*MHKAYI Trigger: AATGTAGGCCTTGTGCATGCAGTCACATTTGCTATG...ATTTTTGATGAAACTTCTGTTTTCCAGAGTGACCGTGCTAATACACATTGCCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR CCA 90 bp | ATTCTGGAGGGCTCAGTTCTAAATGGAGCATCTACACACATCACATTTCTTCTCCAATACATGGAGAAGTaGACTTCAAAGCTCTATGTT | + |
|
Preference number: 2 (lower is better) Translates to: ILEGSVLNGASTHITFLLQYMEK*TSKLYV Trigger: AACATAGAGCTTTGAAGTCCACTTCTCCATGTATTG...GAGAAGAAATGTGATGTGTGTAGATGCTCCATTTAGAACTGAGCCCTCCAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR TCA 90 bp | GATAGTAAGTTGTCAACTCAGTTCCAAATGGTGTCCCTTCTATATCGAACAGAAAGGATTTTGATCCCATaGCACACATCAAACATGTCA | + |
|
Preference number: 2 (lower is better) Translates to: DSKLSTQFQMVSLLYRTERILIP*HTSNMS Trigger: TGACATGTTTGATGTGTGTCATGGGATCAAAATCCT...TTCTGTTCGATATAGAAGGGACACCATTTGGAACTGAGTTGACAACTTACTATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR CCA 90 bp | CTGGCAATGTGTATTAGCACGGTCACTCTGGAAAACAGAAGTTTCATCAAAAATAGAAATAGGAAGGCTTaGAAGGAGAAACAGTGGATA | + |
|
Preference number: 2 (lower is better) Translates to: LAMCISTVTLENRSFIKNRNRKA*KEKQWI Trigger: TATCCACTGTTTCTCCTTCCAAGCCTTCCTATTTCT...ATTTTTGATGAAACTTCTGTTTTCCAGAGTGACCGTGCTAATACACATTGCCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR CCA 90 bp | CTGGCAATGTGTATTAGCACGGTCACTCTGGAAAACAGAAGTTTCATCAAAAATGCTATAGAGACTGAATaGGTACCTCTAAATGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: LAMCISTVTLENRSFIKNAIETE*VPLNET Trigger: TGTCTCATTTAGAGGTACCCATTCAGTCTCTATAGC...ATTTTTGATGAAACTTCTGTTTTCCAGAGTGACCGTGCTAATACACATTGCCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR TCA 90 bp | CTCCTCATTGTGACATCGCACGTTTGTTTCAATGAAACAAATCAAAAGGTTTTCTTTCTCTTATTTCTATaGAAACCACAAAGCGGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LLIVTSHVCFNETNQKVFFLLFL*KPQSGG Trigger: TCCCCCGCTTTGTGGTTTTCATAGAAATAAGAGAAA...GAAAACCTTTTGATTTGTTTCATTGAAACAAACGTGCGATGTCACAATGAGGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| 3UTR-3UTR TCA 90 bp | GATAGTAAGTTGTCAACTCAGTTCCAAATGGTGTCCCTTCTATATCGAACAGAAATCCCTATCAGCCCCTaGAACATTTCAATAAATACA | + |
|
Preference number: 2 (lower is better) Translates to: DSKLSTQFQMVSLLYRTEIPISP*NISINT Trigger: TGTATTTATTGAAATGTTTCAGGGGCTGATAGGGAT...TTCTGTTCGATATAGAAGGGACACCATTTGGAACTGAGTTGACAACTTACTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR TCA 90 bp | CATGATGCCAAAACCAGGAAGGGCTCAACAACAAAGAAAACTATAACACAATTTATGGGTACCTCTAAATaGGACAGCTATATTAGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: HDAKTRKGSTTKKTITQFMGTSK*DSYISL Trigger: GAGACTAATATAGCTGTCTCATTTAGAGGTACCCAT...AAATTGTGTTATAGTTTTCTTTGTTGTTGAGCCCTTCCTGGTTTTGGCATCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR TCA 72 bp | TTTTCTCCTGTCTCCTCCAAGATCCAGGACTGCAGATaGCTCGACCACACTGCTCGCAGTCACAGGCCCGTT | + |
|
Preference number: 3 (lower is better) Translates to: FSPVSSKIQDCR*LDHTARSHRPV Trigger: AACGGGCCTGTGACTGCGAGCAGTGTGGTCGAGTCATCTGCAGTCCTGGATCTTGGAGGAGACAGGAGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| 3UTR CCA 72 bp | GACACACGGAGCAATGGAAGGGTCCCAGAACAACCATaGAGCCACTCCTTCTGGTTTCAGCAAAGGCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: DTRSNGRVPEQP*SHSFWFQQRHP Trigger: TGGGTGCCTTTGCTGAAACCAGAAGGAGTGGCTCCATGGTTGTTCTGGGACCCTTCCATTGCTCCGTGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGATCCAATTGTGCGGCTGCAGTTCAGTGGTACACCTCTTGCCTACCACATGAGCGCGCCACAGAGTaGGGGGTGGGGGAATATCTT | + |
|
Preference number: 3 (lower is better) Translates to: KRSNCAAAVQWYTSCLPHERATE*GVGEYL Trigger: AAGATATTCCCCCACCCCCAACTCTGTGGCGCGCTC...ATGTGGTAGGCAAGAGGTGTACCACTGAACTGCAGCCGCACAATTGGATCTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR TCA 72 bp | AGGGTGTTGGATTCCTTGGAACTGGAGTTACAGGTGTaGGGTGCCACACAGGTGCTGGGAATCAAGCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RVLDSLELELQV*GATQVLGIKPQ Trigger: CTGAGGCTTGATTCCCAGCACCTGTGTGGCACCTCACACCTGTAACTCCAGTTCCAAGGAATCCAACACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR CCA 72 bp | GAGAGAGAGAGAGAGAGAGAGAGCGCGCCACAGAGTTaGGGGTGGGGGAATATCTTTGGACTCTCATTCATC | + |
|
Preference number: 3 (lower is better) Translates to: ERERERESAPQS*GWGNIFGLSFI Trigger: GATGAATGAGAGTCCAAAGATATTCCCCCACCCCCAACTCTGTGGCGCGCTCTCTCTCTCTCTCTCTCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR TCA 72 bp | TTACCTGCCTGTCTATCTGTGCACCATGCGCATGTCTaGTGCCCAGAGATCAGAGGAGGGTGTTGGATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LPACLSVHHAHV*CPEIRGGCWIP Trigger: AGGAATCCAACACCCTCCTCTGATCTCTGGGCATCAGACATGCGCATGGTGCACAGATAGACAGGCAGGTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR GCA 72 bp | TGGAACTGGAGTTACAGGTGTGAGGTGCCACACAGGTaGTGGGAATCAAGCCTCAGTCCTCTAGGAAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: WNWSYRCEVPHR*WESSLSPLGKE Trigger: CTCTTTTCCTAGAGGACTGAGGCTTGATTCCCAGCACCTGTGTGGCACCTCACACCTGTAACTCCAGTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR CCA 72 bp | CAGAGCCAACTTCTAGAGTGTCTCTATACTCAGCACTaGGGGGACAGACACAAGAAATGCTCCTGCTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: QSQLLECLYTQH*GDRHKKCSCCP Trigger: TGGGCAGCAGGAGCATTTCTTGTGTCTGTCCCCCCAGTGCTGAGTATAGAGACACTCTAGAAGTTGGCTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR CCA 72 bp | GGAAGGGTCCCAGAACAACCATGGAGCCACTCCTTCTaGTTTCAGCAAAGGCACCCAAATCACGCTAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: GRVPEQPWSHSF*FQQRHPNHAKD Trigger: ATCCTTAGCGTGATTTGGGTGCCTTTGCTGAAACCAGAAGGAGTGGCTCCATGGTTGTTCTGGGACCCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR GCA 72 bp | TACCTGGTAAGGGTGTTTTACCTGCCTGTCTATCTGTaGACCATGCGCATGTCTGATGCCCAGAGATCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: YLVRVFYLPVYL*TMRMSDAQRSE Trigger: CTCTGATCTCTGGGCATCAGACATGCGCATGGTGCACAGATAGACAGGCAGGTAAAACACCCTTACCAGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR CCA 72 bp | GCTCTCCACTTTGGTCAGAGAAGCTGCTTTTCCCAGTaGACAGCTGTCAATGGAGTGATGCACAACTGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: ALHFGQRSCFSQ*TAVNGVMHNWS Trigger: TGACCAGTTGTGCATCACTCCATTGACAGCTGTCCACTGGGAAAAGCAGCTTCTCTGACCAAAGTGGAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR CCA 72 bp | CTCTTGACACCAACAGACCTTGACTGCTCTCCACTTTaGTCAGAGAAGCTGCTTTTCCCAGTGGACAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LLTPTDLDCSPL*SEKLLFPVDSC Trigger: ACAGCTGTCCACTGGGAAAAGCAGCTTCTCTGACCAAAGTGGAGAGCAGTCAAGGTCTGTTGGTGTCAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR TCA 72 bp | GAGTTCAGCCTACTGGCTAGCTTTCATAGTGCTAGATaGTGCTGTGTTTACCCAGCTGAGAAGCCTCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: EFSLLASFHSAR*CCVYPAEKPLS Trigger: GCTCAGAGGCTTCTCAGCTGGGTAAACACAGCATCATCTAGCACTATGAAAGCTAGCCAGTAGGCTGAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR GCA 72 bp | CCATCCATTCAGCTCTTGACACCAACAGACCTTGACTaGTCTCCACTTTGGTCAGAGAAGCTGCTTTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PSIQLLTPTDLD*SPLWSEKLLFP Trigger: TGGGAAAAGCAGCTTCTCTGACCAAAGTGGAGAGCAGTCAAGGTCTGTTGGTGTCAAGAGCTGAATGGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR GCA 72 bp | CACTGTTGTTCACCTCACACAGCTAGACACATCTTCTaGCACTCAAGGACATGTTCCAAGCCTCCAACCAGT | + |
|
Preference number: 3 (lower is better) Translates to: HCCSPHTARHIF*HSRTCSKPPTS Trigger: ACTGGTTGGAGGCTTGGAACATGTCCTTGAGTGGCAGAAGATGTGTCTAGCTGTGTGAGGTGAACAACAGTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR CCA 72 bp | AAAGGAAAGAGATCCAATTGTGCGGCTGCAGTTCAGTaGTACACCTCTTGCCTACCACATACAAGCTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: KGKRSNCAAAVQ*YTSCLPHTSSL Trigger: CAAGGAGCTTGTATGTGGTAGGCAAGAGGTGTACCACTGAACTGCAGCCGCACAATTGGATCTCTTTCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR TCA 72 bp | CATTTCTTCTCTCAGAGGACCAGGGATCATTACAGATaGGGGAGCCGAAAGAATGTGAGAGCCAGAGTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: HFFSQRTRDHYR*GSRKNVRARVN Trigger: ATTCACTCTGGCTCTCACATTCTTTCGGCTCCCTCATCTGTAATGATCCCTGGTCCTCTGAGAGAAGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR TCA 72 bp | CACAGCCATGAGTACGGCAAGAATAACCAACCACTGTaGCTGGATTTCAGGCCTATTTCACACAACCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: HSHEYGKNNQPL*LDFRPISHNPQ Trigger: TTGTGGGTTGTGTGAAATAGGCCTGAAATCCAGTCACAGTGGTTGGTTATTCTTGCCGTACTCATGGCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR GCA 72 bp | ATGTGTACAAGTGTGTCTCCTGTAACTAGAGTCACATaGAGTTGTGAGCCCTGTGACGTGGTGCTAAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: MCTSVSPVTRVT*SCEPCDVVLKS Trigger: GCTTTTTAGCACCACGTCACAGGGCTCACAACTGCATGTGACTCTAGTTACAGGAGACACACTTGTACACAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| 3UTR TCA 72 bp | CTGCCACTCAAGGACATGTTCCAAGCCTCCAACCAGTaGACAATGTTCCTGAATGACTACAAGGCATTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LPLKDMFQASNQ*TMFLNDYKAFL Trigger: TAAGAATGCCTTGTAGTCATTCAGGAACATTGTTCACTGGTTGGAGGCTTGGAACATGTCCTTGAGTGGCAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR TCA 72 bp | CTAGATGATGCTGTGTTTACCCAGCTGAGAAGCCTCTaGGCTACAATTACAGATCAGTCTGACAAGACACAG | + |
|
Preference number: 3 (lower is better) Translates to: LDDAVFTQLRSL*ATITDQSDKTQ Trigger: CTGTGTCTTGTCAGACTGATCTGTAATTGTAGCTCAGAGGCTTCTCAGCTGGGTAAACACAGCATCATCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR CCA 72 bp | GGACAGTTGCACCTACTAACTGACAACAGCTGTGACTaGAAATACAAGCGAGACAAAAATGACAGCATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GQLHLLTDNSCD*KYKRDKNDSME Trigger: CTCCATGCTGTCATTTTTGTCTCGCTTGTATTTCCAGTCACAGCTGTTGTCAGTTAGTAGGTGCAACTGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR GCA 72 bp | TTAAAAAGAGAAAGGAAAGAGATCCAATTGTGCGGCTaGAGTTCAGTGGTACACCTCTTGCCTACCACATAC | + |
|
Preference number: 3 (lower is better) Translates to: LKRERKEIQLCG*SSVVHLLPTTY Trigger: GTATGTGGTAGGCAAGAGGTGTACCACTGAACTGCAGCCGCACAATTGGATCTCTTTCCTTTCTCTTTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTGGAGGGCTCAGTTCTAAATGGAGCATCTACACACATCACATTTCTTCTCGGATGGAACTGGAGATaGATAGTAAGTTGTCAACTC | + |
|
Preference number: 3 (lower is better) Translates to: ILEGSVLNGASTHITFLLGWNWR*IVSCQL Trigger: GAGTTGACAACTTACTATCAATCTCCAGTTCCATCC...GAGAAGAAATGTGATGTGTGTAGATGCTCCATTTAGAACTGAGCCCTCCAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR TCA 72 bp | TCCGATATGTGTTACCATCTGTGCCAAATGAAACCTTaGACATCTCTTTTGAGAAGATTAGCACTCCGGATC | + |
|
Preference number: 3 (lower is better) Translates to: SDMCYHLCQMKP*TSLLRRLALRI Trigger: GATCCGGAGTGCTAATCTTCTCAAAAGAGATGTTCAAGGTTTCATTTGGCACAGATGGTAACACATATCGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| 3UTR GCA 72 bp | ACTGCTCCTATGTTCATAGTCTTAAAAGACCCAAAGTaGCGCACCAAGACTCTTACATCCAATCATTACTTC | + |
|
Preference number: 3 (lower is better) Translates to: TAPMFIVLKDPK*RTKTLTSNHYF Trigger: GAAGTAATGATTGGATGTAAGAGTCTTGGTGCGGCACTTTGGGTCTTTTAAGACTATGAACATAGGAGCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR CCA 72 bp | ATCATAGCTTATACTGACCTAGAGAGTTCAGCCTACTaGCTAGCTTTCATAGTGCTAGATGATGCTGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: IIAYTDLESSAY*LAFIVLDDAVF Trigger: AAACACAGCATCATCTAGCACTATGAAAGCTAGCCAGTAGGCTGAACTCTCTAGGTCAGTATAAGCTATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR CAA 90 bp | CACCTACTAACTGACAACAGCTGTGACTGGAAATACAAGCGAGACAAAAATGACGTGCCAAATGAAACCTaGAACATCTCTTTTGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HLLTDNSCDWKYKRDKNDVPNET*NISFEK Trigger: CTTCTCAAAAGAGATGTTCAAGGTTTCATTTGGCAC...GTCATTTTTGTCTCGCTTGTATTTCCAGTCACAGCTGTTGTCAGTTAGTAGGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR CAA 90 bp | CATGATGCCAAAACCAGGAAGGGCTCAACAACAAAGAAAACTATAACACAATTTCCAACTCAATGTCCTTaGGAAGGAGCAGAAGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: HDAKTRKGSTTKKTITQFPTQCP*EGAEDA Trigger: AGCATCTTCTGCTCCTTCCAAAGGACATTGAGTTGG...AAATTGTGTTATAGTTTTCTTTGTTGTTGAGCCCTTCCTGGTTTTGGCATCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR CAA 90 bp | ATTCTGGAGGGCTCAGTTCTAAATGGAGCATCTACACACATCACATTTCTTCTCGGGTTACAATGTCATTaGAAAACCTATAACTTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: ILEGSVLNGASTHITFLLGLQCH*KTYNFA Trigger: GGCAAAGTTATAGGTTTTCAAATGACATTGTAACCC...GAGAAGAAATGTGATGTGTGTAGATGCTCCATTTAGAACTGAGCCCTCCAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR TCA 72 bp | GAGCAAGACACCCAATATATTACTTTGCTCACTTTGTaGACACCACCAACCATACCAGCAACACATAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: EQDTQYITLLTL*TPPTIPATHKQ Trigger: TTGTTTATGTGTTGCTGGTATGGTTGGTGGTGTTCACAAAGTGAGCAAAGTAATATATTGGGTGTCTTGCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR TCA 72 bp | GTTCCAAGCCTCCAACCAGTGAACAATGTTCCTGAATaGCTACAAGGCATTCTTAAGTTGAAAAACTGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: VPSLQPVNNVPE*LQGILKLKNCE Trigger: TTCACAGTTTTTCAACTTAAGAATGCCTTGTAGTCATTCAGGAACATTGTTCACTGGTTGGAGGCTTGGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR TCA 72 bp | CCATTCCTATGCTCACAAATCACCACCATAGTAATATaGAAAAGTCTAAGCTGTTCAGACTTCACACATGCC | + |
|
Preference number: 3 (lower is better) Translates to: PFLCSQITTIVI*KSLSCSDFTHA Trigger: GGCATGTGTGAAGTCTGAACAGCTTAGACTTTTTCATATTACTATGGTGGTGATTTGTGAGCATAGGAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR GCA 72 bp | GGTCATCGTGACAATCTAAAAACACTGAAGACTGAATaGTCTAGAAAAGGGAAACCATTCCTATGCTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: GHRDNLKTLKTE*SRKGKPFLCSQ Trigger: TTGTGAGCATAGGAATGGTTTCCCTTTTCTAGAGCATTCAGTCTTCAGTGTTTTTAGATTGTCACGATGACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR CCA 72 bp | TTGGTCACCAAGAATTGTTATTGGCAGGAATCTGGATaGAACTGGAGATTGATAGTAAGTTGTCAACTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LVTKNCYWQESG*NWRLIVSCQLS Trigger: ACTGAGTTGACAACTTACTATCAATCTCCAGTTCCATCCAGATTCCTGCCAATAACAATTCTTGGTGACCAA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR CCA 72 bp | ATAGATATTCAAGGATCCACTGATCACCTCAATACATaGAGAAGTGGACTTCAAAGCTCTATGTTCCCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: IDIQGSTDHLNT*RSGLQSSMFPD Trigger: ATCAGGGAACATAGAGCTTTGAAGTCCACTTCTCCATGTATTGAGGTGATCAGTGGATCCTTGAATATCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR-3UTR CAA 90 bp | CATGATGCCAAAACCAGGAAGGGCTCAACAACAAAGAAAACTATAACACAATTTAGGAAGTATGACAAATaGGGAATGGACATTAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: HDAKTRKGSTTKKTITQFRKYDK*GMDIRG Trigger: GCCTCTAATGTCCATTCCCAATTTGTCATACTTCCT...AAATTGTGTTATAGTTTTCTTTGTTGTTGAGCCCTTCCTGGTTTTGGCATCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR TCA 72 bp | TTGAGTCACAGAGTATTAAGAAATCATAGCTTATACTaGCCTAGAGAGTTCAGCCTACTGGCTAGCTTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LSHRVLRNHSLY*PREFSLLASFH Trigger: ATGAAAGCTAGCCAGTAGGCTGAACTCTCTAGGTCAGTATAAGCTATGATTTCTTAATACTCTGTGACTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR CCA 72 bp | ACCAAGAATTGTTATTGGCAGGAATCTGGATGGAACTaGAGATTGATAGTAAGTTGTCAACTCAGTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: TKNCYWQESGWN*RLIVSCQLSSK Trigger: TTTGGAACTGAGTTGACAACTTACTATCAATCTCCAGTTCCATCCAGATTCCTGCCAATAACAATTCTTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR CCA 72 bp | ATTCTTGGTCACCAAGAATTGTTATTGGCAGGAATCTaGATGGAACTGGAGATTGATAGTAAGTTGTCAACT | + |
|
Preference number: 3 (lower is better) Translates to: ILGHQELLLAGI*MELEIDSKLST Trigger: AGTTGACAACTTACTATCAATCTCCAGTTCCATCCAGATTCCTGCCAATAACAATTCTTGGTGACCAAGAAT 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR GCA 72 bp | AATATGAAAAAGTCTAAGCTGTTCAGACTTCACACATaGCCCTCAAAGTTCCAATGTCATTATTTCCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: NMKKSKLFRLHT*PSKFQCHYFQK Trigger: TTTCTGGAAATAATGACATTGGAACTTTGAGGGGCATGTGTGAAGTCTGAACAGCTTAGACTTTTTCATATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR CCA 72 bp | TGGAGATTGATAGTAAGTTGTCAACTCAGTTCCAAATaGTGTCCCTTCTATATCGAACAGAATCAAAATGTA | + |
|
Preference number: 3 (lower is better) Translates to: WRLIVSCQLSSK*CPFYIEQNQNV Trigger: TACATTTTGATTCTGTTCGATATAGAAGGGACACCATTTGGAACTGAGTTGACAACTTACTATCAATCTCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR TCA 72 bp | GTTAAAGTACATGGAAACCTGGGTTACAATGTCATTTaGAAACCTATAACTTTGCCAACATACGAGCTAATA | + |
|
Preference number: 3 (lower is better) Translates to: VKVHGNLGYNVI*KPITLPTYELI Trigger: TATTAGCTCGTATGTTGGCAAAGTTATAGGTTTTCAAATGACATTGTAACCCAGGTTTCCATGTACTTTAAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR TCA 72 bp | ACTAATTGTAGAAAATATAGATATTCAAGGATCCACTaGTCACCTCAATACATGGAGAAGTGGACTTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TNCRKYRYSRIH*SPQYMEKWTSK Trigger: CTTTGAAGTCCACTTCTCCATGTATTGAGGTGATCAGTGGATCCTTGAATATCTATATTTTCTACAATTAGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR GCA 72 bp | TACTACCTTATGATCCTGCTGTACTACTGCTTAGTATaGAACAAAAGGAATCTAAGTCAGATAATACTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: YYLMILLYYCLV*NKRNLSQIILE Trigger: TTCTAGTATTATCTGACTTAGATTCCTTTTGTTGCATACTAAGCAGTAGTACAGCAGGATCATAAGGTAGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| CDS-3UTR TCA 90 bp | CTCGCAGTCACAGGCCCGTTTCTCTTTGATGCATTCCAAGGAGCTTTAAGCTCAAGTTCTCAAATGATGTaGGAGAACTGGAGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LAVTGPFLFDAFQGALSSSSQMM*ENWRGP Trigger: GGGCCCCCTCCAGTTCTCTCACATCATTTGAGAACT...TGAGCTTAAAGCTCCTTGGAATGCATCAAAGAGAAACGGGCCTGTGACTGCGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| CDS-3UTR TCA 90 bp | AGTTTTCTCCTGTCTCCTCCAAGATCCAGGACTGCAGATGACTCGACCACACTGGCAAATGGTTCAGAGTaGAGAAGGGCTTCCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SFLLSPPRSRTADDSTTLANGSE*RRASHS Trigger: ACTGTGGGAAGCCCTTCTTCACTCTGAACCATTTGC...CAGTGTGGTCGAGTCATCTGCAGTCCTGGATCTTGGAGGAGACAGGAGAAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| 3UTR CAA 72 bp | ATCCAATTGTGCGGCTGCAGTTCAGTGGTACACCTCTaGCCTACCACATACAAGCTCCTTGGTTCAACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IQLCGCSSVVHL*PTTYKLLGSTL Trigger: CAGGGTTGAACCAAGGAGCTTGTATGTGGTAGGCAAGAGGTGTACCACTGAACTGCAGCCGCACAATTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR CAA 72 bp | CAACACAGGGGACACCGAACTACAGAACTAATCCCTTaGAGACCTCCTAAATCCAAACACCAGCTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QHRGHRTTELIP*RPPKSKHQLCQ Trigger: CTGGCAGAGCTGGTGTTTGGATTTAGGAGGTCTCAAAGGGATTAGTTCTGTAGTTCGGTGTCCCCTGTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| 3UTR CAA 72 bp | ACTCTAAACACTGAGTACCTGCCATCCATTCAGCTCTaGACACCAACAGACCTTGACTGCTCTCCACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLNTEYLPSIQL*TPTDLDCSPLW Trigger: CCAAAGTGGAGAGCAGTCAAGGTCTGTTGGTGTCAAGAGCTGAATGGATGGCAGGTACTCAGTGTTTAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| CDS-3UTR CCA 90 bp | AGTTTTCTCCTGTCTCCTCCAAGATCCAGGACTGCAGATGACTCGACCACACTGGCACGATTCATGCTTTaGGTCAGGTTTAAGAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SFLLSPPRSRTADDSTTLARFML*VRFKKY Trigger: GTACTTCTTAAACCTGACCCAAAGCATGAATCGTGC...CAGTGTGGTCGAGTCATCTGCAGTCCTGGATCTTGGAGGAGACAGGAGAAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| CDS-3UTR GCA 90 bp | CTCGCAGTCACAGGCCCGTTTCTCTTTGATGCATTCCAAGGAGCTTTAAGCTCATCTTCGCACGATTCATaGTTTGGGTCAGGTTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LAVTGPFLFDAFQGALSSSSHDS*FGSGLR Trigger: TCTTAAACCTGACCCAAAGCATGAATCGTGCGAAGA...TGAGCTTAAAGCTCCTTGGAATGCATCAAAGAGAAACGGGCCTGTGACTGCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| CDS-3UTR CCA 90 bp | CTCGCAGTCACAGGCCCGTTTCTCTTTGATGCATTCCAAGGAGCTTTAAGCTCAGGCTTCTCACCGGTGTaGGTTATTTTATGCCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LAVTGPFLFDAFQGALSSGFSPV*VILCLK Trigger: TTTAAGGCATAAAATAACCCACACCGGTGAGAAGCC...TGAGCTTAAAGCTCCTTGGAATGCATCAAAGAGAAACGGGCCTGTGACTGCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| CDS-3UTR TCA 90 bp | AGTTTTCTCCTGTCTCCTCCAAGATCCAGGACTGCAGATGACTCGACCACACTGGGTATATATTTTCAATaGTATGGTGCTCCAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFLLSPPRSRTADDSTTLGIYFQ*YGAPNC Trigger: GCAGTTTGGAGCACCATATCATTGAAAATATATACC...CAGTGTGGTCGAGTCATCTGCAGTCCTGGATCTTGGAGGAGACAGGAGAAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| CDS-3UTR CCA 90 bp | CTCGCAGTCACAGGCCCGTTTCTCTTTGATGCATTCCAAGGAGCTTTAAGCTCAACATATATACACTCCTaGCAAGGAGTTCTGGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LAVTGPFLFDAFQGALSSTYIHS*QGVLVY Trigger: GTAAACCAGAACTCCTTGCCAGGAGTGTATATATGT...TGAGCTTAAAGCTCCTTGGAATGCATCAAAGAGAAACGGGCCTGTGACTGCGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| CDS-3UTR CCA 90 bp | CTCGCAGTCACAGGCCCGTTTCTCTTTGATGCATTCCAAGGAGCTTTAAGCTCAACACTTAGAGATAAATaGCCAATGACTACCGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LAVTGPFLFDAFQGALSSTLRDK*PMTTVA Trigger: TGCAACGGTAGTCATTGGCCATTTATCTCTAAGTGT...TGAGCTTAAAGCTCCTTGGAATGCATCAAAGAGAAACGGGCCTGTGACTGCGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| CDS-3UTR TCA 90 bp | AAGAGATCCAATTGTGCGGCTGCAGTTCAGTGGTACACCTCTTGCCTACCACATAAGATTTCTGCACATTaGTGGTCATCTTTACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KRSNCAAAVQWYTSCLPHKISAH*WSSLQS Trigger: TGACTGTAAAGATGACCATCAATGTGCAGAAATCTT...ATGTGGTAGGCAAGAGGTGTACCACTGAACTGCAGCCGCACAATTGGATCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| CDS-3UTR GCA 90 bp | AGTTTTCTCCTGTCTCCTCCAAGATCCAGGACTGCAGATGACTCGACCACACTGAGTAATTCATGTCTATaGAAATGGTTCAGAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFLLSPPRSRTADDSTTLSNSCL*KWFRVK Trigger: CTTCACTCTGAACCATTTGCATAGACATGAATTACT...CAGTGTGGTCGAGTCATCTGCAGTCCTGGATCTTGGAGGAGACAGGAGAAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| CDS-3UTR CCA 90 bp | ACACCACCAACCATACCAGCAACACATAAACAATGCCCTCCAAACACACTCGTCACACTTAGAGATAAATaGCCAATGACTACCGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPPTIPATHKQCPPNTLVTLRDK*PMTTVA Trigger: TGCAACGGTAGTCATTGGCCATTTATCTCTAAGTGT...GACGAGTGTGTTTGGAGGGCATTGTTTATGTGTTGCTGGTATGGTTGGTGGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| CDS-3UTR TCA 90 bp | GCAAAAGTTTTCATCCGATATGTGTTACCATCTGTGCCAAATGAAACCTTGAACGCAAATGGTTCAGAGTaGAGAAGGGCTTCCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: AKVFIRYVLPSVPNETLNANGSE*RRASHS Trigger: ACTGTGGGAAGCCCTTCTTCACTCTGAACCATTTGC...GTTCAAGGTTTCATTTGGCACAGATGGTAACACATATCGGATGAAAACTTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| CDS-3UTR TCA 90 bp | ATTCTGGAGGGCTCAGTTCTAAATGGAGCATCTACACACATCACATTTCTTCTCTTCATAGTTCTCAAATaGTGTGAGAGAACTGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILEGSVLNGASTHITFLLFIVLK*CERTGG Trigger: CCCTCCAGTTCTCTCACATCATTTGAGAACTATGAA...GAGAAGAAATGTGATGTGTGTAGATGCTCCATTTAGAACTGAGCCCTCCAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| CDS-3UTR TCA 90 bp | GCAAAAGTTTTCATCCGATATGTGTTACCATCTGTGCCAAATGAAACCTTGAACAATACCTGGAGGAACTaGAACACTTCCCACACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AKVFIRYVLPSVPNETLNNTWRN*NTSHTA Trigger: AGCAGTGTGGGAAGTGTTTCAGTTCCTCCAGGTATT...GTTCAAGGTTTCATTTGGCACAGATGGTAACACATATCGGATGAAAACTTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| CDS-3UTR GCA 90 bp | ATTCTGGAGGGCTCAGTTCTAAATGGAGCATCTACACACATCACATTTCTTCTCTCTTCGCACGATTCATaGTTTGGGTCAGGTTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILEGSVLNGASTHITFLLSSHDS*FGSGLR Trigger: TCTTAAACCTGACCCAAAGCATGAATCGTGCGAAGA...GAGAAGAAATGTGATGTGTGTAGATGCTCCATTTAGAACTGAGCCCTCCAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| CDS-3UTR GCA 90 bp | CTCCTCATTGTGACATCGCACGTTTGTTTCAATGAAACAAATCAAAAGGTTTTCAAGGCGTTGCCGCACTaGTCACATATGTACGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLIVTSHVCFNETNQKVFKALPH*SHMYGF Trigger: GAAACCGTACATATGTGAGCAGTGCGGCAACGCCTT...GAAAACCTTTTGATTTGTTTCATTGAAACAAACGTGCGATGTCACAATGAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| CDS-3UTR CCA 90 bp | ACTGTACTGATAACATTCTCACCAGAGTGTGCATTTCCTGGAGCATGCTACAAAGTGTTTGTAGGTAAGTaGGAAAAGCAAAGGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVLITFSPECAFPGACYKVFVGK*EKQRLS Trigger: GGAAAGCCTTTGCTTTTCCCACTTACCTACAAACAC...TTTGTAGCATGCTCCAGGAAATGCACACTCTGGTGAGAATGTTATCAGTACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| 3UTR CAA 72 bp | GCAGGAATCTGGATGGAACTGGAGATTGATAGTAAGTaGTCAACTCAGTTCCAAATGGTGTCCCTTCTATAT | + |
|
Preference number: 4 (lower is better) Translates to: AGIWMELEIDSK*STQFQMVSLLY Trigger: ATATAGAAGGGACACCATTTGGAACTGAGTTGACAACTTACTATCAATCTCCAGTTCCATCCAGATTCCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
||
| CDS-3UTR TCA 90 bp | CTCCTCATTGTGACATCGCACGTTTGTTTCAATGAAACAAATCAAAAGGTTTTCAATACCTGGAGGAACTaGAACACTTCCCACACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLIVTSHVCFNETNQKVFNTWRN*NTSHTA Trigger: AGCAGTGTGGGAAGTGTTTCAGTTCCTCCAGGTATT...GAAAACCTTTTGATTTGTTTCATTGAAACAAACGTGCGATGTCACAATGAGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| CDS-3UTR TCA 90 bp | GCAAAAGTTTTCATCCGATATGTGTTACCATCTGTGCCAAATGAAACCTTGAACATTTTGACATGTCTTTaGAGAGACGCAGATCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AKVFIRYVLPSVPNETLNILTCL*RDADRG Trigger: CCCTCGATCTGCGTCTCTTCAAAGACATGTCAAAAT...GTTCAAGGTTTCATTTGGCACAGATGGTAACACATATCGGATGAAAACTTTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| CDS-3UTR TCA 90 bp | ACTGTACTGATAACATTCTCACCAGAGTGTGCATTTCCTGGAGCATGCTACAAAAAGATTTCTGCACATTaGTGGTCATCTTTACAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TVLITFSPECAFPGACYKKISAH*WSSLQS Trigger: TGACTGTAAAGATGACCATCAATGTGCAGAAATCTT...TTTGTAGCATGCTCCAGGAAATGCACACTCTGGTGAGAATGTTATCAGTACAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| CDS-3UTR TCA 90 bp | GTAGGTTCTTTCATGTCTGTAAGAGGATGTGATAACTCAAGACTATCCAAGATTATTTTGACATGTCTTTaGAGAGACGCAGATCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VGSFMSVRGCDNSRLSKIILTCL*RDADRG Trigger: CCCTCGATCTGCGTCTCTTCAAAGACATGTCAAAAT...AATCTTGGATAGTCTTGAGTTATCACATCCTCTTACAGACATGAAAGAACCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| CDS-3UTR TCA 90 bp | GTAGGTTCTTTCATGTCTGTAAGAGGATGTGATAACTCAAGACTATCCAAGATTCCTCGGTGTGAATTTTaGCATGTCTTTGAAGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: VGSFMSVRGCDNSRLSKIPRCEF*HVFEET Trigger: CGTCTCTTCAAAGACATGTCAAAATTCACACCGAGG...AATCTTGGATAGTCTTGAGTTATCACATCCTCTTACAGACATGAAAGAACCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| CDS-3UTR TCA 90 bp | CTCCTCATTGTGACATCGCACGTTTGTTTCAATGAAACAAATCAAAAGGTTTTCCCTCGGTGTGAATTTTaGCATGTCTTTGAAGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: LLIVTSHVCFNETNQKVFPRCEF*HVFEET Trigger: CGTCTCTTCAAAGACATGTCAAAATTCACACCGAGG...GAAAACCTTTTGATTTGTTTCATTGAAACAAACGTGCGATGTCACAATGAGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
||
| CDS-3UTR GCA 90 bp | ATTCTGGAGGGCTCAGTTCTAAATGGAGCATCTACACACATCACATTTCTTCTCGAAGTCGAAGATTTCTaGACATTGATGGTCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILEGSVLNGASTHITFLLEVEDF*TLMVIF Trigger: AAAGATGACCATCAATGTGCAGAAATCTTCGACTTC...GAGAAGAAATGTGATGTGTGTAGATGCTCCATTTAGAACTGAGCCCTCCAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| 3UTR CAA 72 bp | ATCCGATATGTGTTACCATCTGTGCCAAATGAAACCTaGAACATCTCTTTTGAGAAGATTAGCACTCCGGAT | + |
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Preference number: 4 (lower is better) Translates to: IRYVLPSVPNET*NISFEKISTPD Trigger: ATCCGGAGTGCTAATCTTCTCAAAAGAGATGTTCAAGGTTTCATTTGGCACAGATGGTAACACATATCGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
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| 3UTR CAA 72 bp | ATGACTGAGTTATCTATAGAGAAGATACCTTCTGTATaGTACCGATCAATCAAAAAGCTCATGGGCCGTGAC | + |
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Preference number: 4 (lower is better) Translates to: MTELSIEKIPSV*YRSIKKLMGRD Trigger: GTCACGGCCCATGAGCTTTTTGATTGATCGGTACAATACAGAAGGTATCTTCTCTATAGATAACTCAGTCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| CDS-3UTR TCA 90 bp | CTCCTCATTGTGACATCGCACGTTTGTTTCAATGAAACAAATCAAAAGGTTTTCTTCATAGTTCTCAAATaGTGTGAGAGAACTGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: LLIVTSHVCFNETNQKVFFIVLK*CERTGG Trigger: CCCTCCAGTTCTCTCACATCATTTGAGAACTATGAA...GAAAACCTTTTGATTTGTTTCATTGAAACAAACGTGCGATGTCACAATGAGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
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| CDS-3UTR GCA 90 bp | CACCTACTAACTGACAACAGCTGTGACTGGAAATACAAGCGAGACAAAAATGACAGTAATTCATGTCTATaGAAATGGTTCAGAGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: HLLTDNSCDWKYKRDKNDSNSCL*KWFRVK Trigger: CTTCACTCTGAACCATTTGCATAGACATGAATTACT...GTCATTTTTGTCTCGCTTGTATTTCCAGTCACAGCTGTTGTCAGTTAGTAGGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| CDS-3UTR CCA 90 bp | GTAGGTTCTTTCATGTCTGTAAGAGGATGTGATAACTCAAGACTATCCAAGATTGTGTTTGTAGGTAAGTaGGAAAAGCAAAGGCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: VGSFMSVRGCDNSRLSKIVFVGK*EKQRLS Trigger: GGAAAGCCTTTGCTTTTCCCACTTACCTACAAACAC...AATCTTGGATAGTCTTGAGTTATCACATCCTCTTACAGACATGAAAGAACCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
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| 3UTR CAA 72 bp | AATTGTTATTGGCAGGAATCTGGATGGAACTGGAGATaGATAGTAAGTTGTCAACTCAGTTCCAAATGGTGT | + |
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Preference number: 4 (lower is better) Translates to: NCYWQESGWNWR*IVSCQLSSKWC Trigger: ACACCATTTGGAACTGAGTTGACAACTTACTATCAATCTCCAGTTCCATCCAGATTCCTGCCAATAACAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| CDS-3UTR CCA 90 bp | GTAGGTTCTTTCATGTCTGTAAGAGGATGTGATAACTCAAGACTATCCAAGATTACATATATACACTCCTaGCAAGGAGTTCTGGTTTAC | + |
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Preference number: 4 (lower is better) Translates to: VGSFMSVRGCDNSRLSKITYIHS*QGVLVY Trigger: GTAAACCAGAACTCCTTGCCAGGAGTGTATATATGT...AATCTTGGATAGTCTTGAGTTATCACATCCTCTTACAGACATGAAAGAACCTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
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| CDS-3UTR TCA 90 bp | GTAGGTTCTTTCATGTCTGTAAGAGGATGTGATAACTCAAGACTATCCAAGATTGGTATATATTTTCAATaGTATGGTGCTCCAAACTGC | + |
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Preference number: 4 (lower is better) Translates to: VGSFMSVRGCDNSRLSKIGIYFQ*YGAPNC Trigger: GCAGTTTGGAGCACCATATCATTGAAAATATATACC...AATCTTGGATAGTCTTGAGTTATCACATCCTCTTACAGACATGAAAGAACCTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
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| CDS-3UTR GCA 90 bp | CTCCTCATTGTGACATCGCACGTTTGTTTCAATGAAACAAATCAAAAGGTTTTCGAAGTCGAAGATTTCTaGACATTGATGGTCATCTTT | + |
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Preference number: 4 (lower is better) Translates to: LLIVTSHVCFNETNQKVFEVEDF*TLMVIF Trigger: AAAGATGACCATCAATGTGCAGAAATCTTCGACTTC...GAAAACCTTTTGATTTGTTTCATTGAAACAAACGTGCGATGTCACAATGAGGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
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| CDS-3UTR CAA 90 bp | ACACCACCAACCATACCAGCAACACATAAACAATGCCCTCCAAACACACTCGTCAATTTTGACATGTCTTaGAAGAGACGCAGATCGAGG | + |
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Preference number: 5 (lower is better) Translates to: TPPTIPATHKQCPPNTLVNFDMS*KRRRSR Trigger: CCTCGATCTGCGTCTCTTCAAAGACATGTCAAAATT...GACGAGTGTGTTTGGAGGGCATTGTTTATGTGTTGCTGGTATGGTTGGTGGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| CDS-3UTR CAA 90 bp | CACCTACTAACTGACAACAGCTGTGACTGGAAATACAAGCGAGACAAAAATGACGCCCCATATTCCATATaGTATAATTCCTTCCCATAT | + |
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Preference number: 5 (lower is better) Translates to: HLLTDNSCDWKYKRDKNDAPYSI*YNSFPY Trigger: ATATGGGAAGGAATTATACAATATGGAATATGGGGC...GTCATTTTTGTCTCGCTTGTATTTCCAGTCACAGCTGTTGTCAGTTAGTAGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159086.10 |
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| CDS-3UTR CAA 90 bp | CTCCTCATTGTGACATCGCACGTTTGTTTCAATGAAACAAATCAAAAGGTTTTCAATTTTGACATGTCTTaGAAGAGACGCAGATCGAGG | + |
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Preference number: 5 (lower is better) Translates to: LLIVTSHVCFNETNQKVFNFDMS*KRRRSR Trigger: CCTCGATCTGCGTCTCTTCAAAGACATGTCAAAATT...GAAAACCTTTTGATTTGTTTCATTGAAACAAACGTGCGATGTCACAATGAGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
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| CDS-3UTR CAA 90 bp | GTAGGTTCTTTCATGTCTGTAAGAGGATGTGATAACTCAAGACTATCCAAGATTGCCCCATATTCCATATaGTATAATTCCTTCCCATAT | + |
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Preference number: 5 (lower is better) Translates to: VGSFMSVRGCDNSRLSKIAPYSI*YNSFPY Trigger: ATATGGGAAGGAATTATACAATATGGAATATGGGGC...AATCTTGGATAGTCTTGAGTTATCACATCCTCTTACAGACATGAAAGAACCTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
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| CDS TCA 72 bp | GGATTCTCTCGTGGGTTTTCAGGGACCTCGAGGAAGTaGAGCTCTTCCCACACTGCTTACACACGTAGGACA | + |
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Preference number: 6 (lower is better) Translates to: GFSRGFSGTSRK*SSSHTAYTRRT Trigger: TGTCCTACGTGTGTAAGCAGTGTGGGAAGAGCTTCACTTCCTCGAGGTCCCTGAAAACCCACGAGAGAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
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| CDS TCA 72 bp | TCTCTCTACAGTGTAAGTACTTTCATAGTTCTCAAATaGTGTGAGAGAACTGGAGGGGGCCCCATATTCCAT | + |
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Preference number: 6 (lower is better) Translates to: SLYSVSTFIVLK*CERTGGGPIFH Trigger: ATGGAATATGGGGCCCCCTCCAGTTCTCTCACATCATTTGAGAACTATGAAAGTACTTACACTGTAGAGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
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| CDS GCA 72 bp | TTCCAGGAGTTTCGGTATATATTTTCAATGATATGGTaGTCCAAACTGCTCCCTATAGAAGCCAGGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: FQEFRYIFSMIW*SKLLPIEARFL Trigger: GAGGAACCTGGCTTCTATAGGGAGCAGTTTGGAGCACCATATCATTGAAAATATATACCGAAACTCCTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
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| CDS CCA 72 bp | CGTTGCACATCCGCTGTTTTCACATATATACACTCCTaGCAAGGAGTTCTGGTTTACAATACTGTGTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: RCTSAVFTYIHS*QGVLVYNTVCS Trigger: ACTACACACAGTATTGTAAACCAGAACTCCTTGCCAGGAGTGTATATATGTGAAAACAGCGGATGTGCAACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
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| CDS TCA 72 bp | CTACAGTGTAAGTACTTTCATAGTTCTCAAATGATGTaGGAGAACTGGAGGGGGCCCCATATTCCATATTGT | + |
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Preference number: 6 (lower is better) Translates to: LQCKYFHSSQMM*ENWRGPHIPYC Trigger: ACAATATGGAATATGGGGCCCCCTCCAGTTCTCTCACATCATTTGAGAACTATGAAAGTACTTACACTGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
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| CDS TCA 72 bp | CCATATTCCATATTGTATAATTCCTTCCCATATTCCTaGTCTTCGCACGATTCATGCTTTGGGTCAGGTTTA | + |
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Preference number: 6 (lower is better) Translates to: PYSILYNSFPYS*SSHDSCFGSGL Trigger: TAAACCTGACCCAAAGCATGAATCGTGCGAAGATCAGGAATATGGGAAGGAATTATACAATATGGAATATGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
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| CDS CCA 72 bp | CTGTTTTCACATATATACACTCCTGGCAAGGAGTTCTaGTTTACAATACTGTGTGTAGTGAAGTCGAAGATT | + |
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Preference number: 6 (lower is better) Translates to: LFSHIYTPGKEF*FTILCVVKSKI Trigger: AATCTTCGACTTCACTACACACAGTATTGTAAACCAGAACTCCTTGCCAGGAGTGTATATATGTGAAAACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057501.9 ENSMUST00000159086.10 |
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