Pregenerated sensors for ZFP870 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095325Ensembl transcript IDs: ENSMUST00000178401.2, ENSMUST00000228075.3, ENSMUST00000235054.2
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGCTGAGGAGCTGGGAACGTAGCTTGGTGATTAAGAGCACCTTCTaGTCTTGGGCAGGACCAGACTTCAGTTCCCAGCACCCCTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: GLRSWERSLVIKSTF*SWAGPDFSSQHPWQ Trigger: CTGCCAGGGGTGCTGGGAACTGAAGTCTGGTCCTGCCCAAGAGCAGAAGGTGCTCTTAATCACCAAGCTACGTTCCCAGCTCCTCAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR GCA 90 bp | CAGACTTCAGTTCCCAGCACCCCTGGCAGCTCACAACTACCAGCTTaGTCTAAGGTAGTAAGTGGTTTTCAACCTTCCCAATGCGGTGAC | + |
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Preference number: 1 (lower is better) Translates to: QTSVPSTPGSSQLPA*SKVVSGFQPSQCGD Trigger: GTCACCGCATTGGGAAGGTTGAAAACCACTTACTACCTTAGAGCAAGCTGGTAGTTGTGAGCTGCCAGGGGTGCTGGGAACTGAAGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR TCA 90 bp | GAGATGCAGACCATTAGCATCATGTCTGGGAACTTACGCAGTCGCTaGGAGCTACATCCTGATCCACAAAAACAGACACAAAGACCGAGA | + |
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Preference number: 1 (lower is better) Translates to: EMQTISIMSGNLRSR*ELHPDPQKQTQRPR Trigger: TCTCGGTCTTTGTGTCTGTTTTTGTGGATCAGGATGTAGCTCTCAGCGACTGCGTAAGTTCCCAGACATGATGCTAATGGTCTGCATCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR TCA 90 bp | ACTGTACTGGTTACTTGTGACAACTTGACACAGGCTAGAGTCATTTaGGAAGAGGGAACCAACATTGAGAAAATGCTTCAAAACCGGGCT | + |
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Preference number: 1 (lower is better) Translates to: TVLVTCDNLTQARVI*EEGTNIEKMLQNRA Trigger: AGCCCGGTTTTGAAGCATTTTCTCAATGTTGGTTCCCTCTTCTCAAATGACTCTAGCCTGTGTCAAGTTGTCACAAGTAACCAGTACAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR GCA 90 bp | CGGTGTGAGTGTTTGTATGCATCTGAAGGGACAGAGAATTGGAGCTaGTCTCAAACTCCTTATGTTTATACAATGGCTGTCCATGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: RCECLYASEGTENWS*SQTPYVYTMAVHVL Trigger: AAGAACATGGACAGCCATTGTATAAACATAAGGAGTTTGAGAGCAGCTCCAATTCTCTGTCCCTTCAGATGCATACAAACACTCACACCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235054.2 |
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| 3UTR TCA 90 bp | CCTTATTCAAATCACCACATTATATATGAAGGATTTCTCTCTGAATaGCAACTACCATGTCTCGAGGGCCCCCTGAGAACTAAGGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: PYSNHHIIYEGFLSE*QLPCLEGPLRTKGF Trigger: AAAGCCCTTAGTTCTCAGGGGGCCCTCGAGACATGGTAGTTGTCATTCAGAGAGAAATCCTTCATATATAATGTGGTGATTTGAATAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR TCA 90 bp | TTCAAGACCTATAGTTTGCCTATAGCTTGCCTGGTATGTGGTTTTTaGCTCAAACTTTCTAAAACAGTCCTTGAGATTTCCTCTGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: FKTYSLPIACLVCGF*LKLSKTVLEISSGL Trigger: GAGCCCAGAGGAAATCTCAAGGACTGTTTTAGAAAGTTTGAGTCAAAAACCACATACCAGGCAAGCTATAGGCAAACTATAGGTCTTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR TCA 90 bp | AATACCTACATCAATTCAAAAGTATATGGTCTTCTCAAATTTGTCTaGCACTTCCCCACATTGCTAGCAATAACCTACTTCATGCAGTTT | + |
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Preference number: 1 (lower is better) Translates to: NTYINSKVYGLLKFV*HFPTLLAITYFMQF Trigger: AAACTGCATGAAGTAGGTTATTGCTAGCAATGTGGGGAAGTGTCAGACAAATTTGAGAAGACCATATACTTTTGAATTGATGTAGGTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR TCA 90 bp | CCCAAAGGGGAGCCCAGTTTCCCTGGGAATACCAGGACCTCAATACACCCAGACAGTAGGACACATGCCTaGGCCACCACACCTGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: PKGEPSFPGNTRTSIHPDSRTHA*ATTPGD Trigger: GTCCCCAGGTGTGGTGGCTCAGGCATGTGTCCTACT...GTCTGGGTGTATTGAGGTCCTGGTATTCCCAGGGAAACTGGGCTCCCCTTTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGAGACGTGGCTTAGTGGTCAGGAGCACTGGCGTTTCAGAGTCCCTGGCGACACCCAGACAGCTCTaGAACTTGGAATCCTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: AWRRGLVVRSTGVSESLATPRQL*NLESFS Trigger: TGAGAAGGATTCCAAGTTTCAGAGCTGTCTGGGTGT...CGCCAGGGACTCTGAAACGCCAGTGCTCCTGACCACTAAGCCACGTCTCCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR TCA 90 bp | CCCTGCTGTCTAGTTTTCCTTTCGTGGGCTCCTGCACTGTACTGGTTACTTGTGGCTTCCTGCCCTGTCTaGGTTCCTGTCCCGACTCCC | + |
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Preference number: 2 (lower is better) Translates to: PCCLVFLSWAPALYWLLVASCPV*VPVPTP Trigger: GGGAGTCGGGACAGGAACTCAGACAGGGCAGGAAGC...CACAAGTAACCAGTACAGTGCAGGAGCCCACGAAAGGAAAACTAGACAGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR TCA 90 bp | GCCTGGAGACGTGGCTTAGTGGTCAGGAGCACTGGCGTTTCAGAGTCCCTGGCGCTACTTCATGCAGTTTaGCTTAGTGAGAACTACCAC | + |
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Preference number: 2 (lower is better) Translates to: AWRRGLVVRSTGVSESLALLHAV*LSENYH Trigger: GTGGTAGTTCTCACTAAGTCAAACTGCATGAAGTAG...CGCCAGGGACTCTGAAACGCCAGTGCTCCTGACCACTAAGCCACGTCTCCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR TCA 90 bp | GTCCATTATAGATGGTGCTATCCCTGGGCTGGTGGTCCTGGATTCTGTAAGAAAAGTAGGACACATGCCTaGGCCACCACACCTGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: VHYRWCYPWAGGPGFCKKSRTHA*ATTPGD Trigger: GTCCCCAGGTGTGGTGGCTCAGGCATGTGTCCTACT...TTTCTTACAGAATCCAGGACCACCAGCCCAGGGATAGCACCATCTATAATGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR GCA 90 bp | CCTGGCAGCTCACAACTACCAGCTTGCTCTAAGGTAGTAAGTGGTTTTCAACCTCCCCTCCGTAGCCTCTaGATCAGCCTCCAGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: PGSSQLPACSKVVSGFQPPLRSL*ISLQLP Trigger: AGGAAGCTGGAGGCTGATGCAGAGGCTACGGAGGGG...AGGTTGAAAACCACTTACTACCTTAGAGCAAGCTGGTAGTTGTGAGCTGCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR GCA 90 bp | GTCCATTATAGATGGTGCTATCCCTGGGCTGGTGGTCCTGGATTCTGTAAGAAACCCCTCCGTAGCCTCTaGATCAGCCTCCAGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: VHYRWCYPWAGGPGFCKKPLRSL*ISLQLP Trigger: AGGAAGCTGGAGGCTGATGCAGAGGCTACGGAGGGG...TTTCTTACAGAATCCAGGACCACCAGCCCAGGGATAGCACCATCTATAATGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR TCA 90 bp | CCCAAAGGGGAGCCCAGTTTCCCTGGGAATACCAGGACCTCAATACACCCAGACCTGAGAGCTACATCCTaGTCCACAAAAACAGACACA | + |
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Preference number: 2 (lower is better) Translates to: PKGEPSFPGNTRTSIHPDLRATS*STKTDT Trigger: TGTGTCTGTTTTTGTGGATCAGGATGTAGCTCTCAG...GTCTGGGTGTATTGAGGTCCTGGTATTCCCAGGGAAACTGGGCTCCCCTTTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR GCA 90 bp | CCCAAAGGGGAGCCCAGTTTCCCTGGGAATACCAGGACCTCAATACACCCAGACTTTCATCACGTGGCTTaGAGCATTTCTCCAGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: PKGEPSFPGNTRTSIHPDFHHVA*SISPVS Trigger: AGACACTGGAGAAATGCTGCAAGCCACGTGATGAAA...GTCTGGGTGTATTGAGGTCCTGGTATTCCCAGGGAAACTGGGCTCCCCTTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR CCA 90 bp | CTACCCAATAGTCAAAGAGCTCACCAAGTCAACCTGCAGCGGCATCTTGGTATCGTTTGCCTGGAGACGTaGCTTAGTGGTCAGGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: LPNSQRAHQVNLQRHLGIVCLET*LSGQEH Trigger: GTGCTCCTGACCACTAAGCCACGTCTCCAGGCAAAC...GATACCAAGATGCCGCTGCAGGTTGACTTGGTGAGCTCTTTGACTATTGGGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR TCA 90 bp | CCCAAAGGGGAGCCCAGTTTCCCTGGGAATACCAGGACCTCAATACACCCAGACGGTTTTTCTCCAGTGTaGGCTATTTCACATCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: PKGEPSFPGNTRTSIHPDGFSPV*AISHLL Trigger: GAGAAGATGTGAAATAGCTCACACTGGAGAAAAACC...GTCTGGGTGTATTGAGGTCCTGGTATTCCCAGGGAAACTGGGCTCCCCTTTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR CCA 90 bp | GCGAGTCATACACAGGCCCTGCTGTCTAGTTTTCCTTTCGTGGGCTCCTGCACTCACTCGTTTGGCTTGTaGTGTTTATCACAGCCATAC | + |
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Preference number: 2 (lower is better) Translates to: ASHTQALLSSFPFVGSCTHSFGL*CLSQPY Trigger: GTATGGCTGTGATAAACACCACAAGCCAAACGAGTG...AGTGCAGGAGCCCACGAAAGGAAAACTAGACAGCAGGGCCTGTGTATGACTCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR TCA 90 bp | GCGAGTCATACACAGGCCCTGCTGTCTAGTTTTCCTTTCGTGGGCTCCTGCACTTACACCTCACACCTCTaGAAAGTTCACATCTACTCT | + |
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Preference number: 2 (lower is better) Translates to: ASHTQALLSSFPFVGSCTYTSHL*KVHIYS Trigger: AGAGTAGATGTGAACTTTTCAGAGGTGTGAGGTGTA...AGTGCAGGAGCCCACGAAAGGAAAACTAGACAGCAGGGCCTGTGTATGACTCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR CCA 90 bp | CTGTCTCCCCACTCGTTTGGCTTGTGGTGTTTATCACAGCCATACTCACCCACTCCTGCAGCGGCATCTTaGTATCTGTGTCTCTTTATG | + |
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Preference number: 2 (lower is better) Translates to: LSPHSFGLWCLSQPYSPTPAAAS*YLCLFM Trigger: CATAAAGAGACACAGATACCAAGATGCCGCTGCAGG...AGTGGGTGAGTATGGCTGTGATAAACACCACAAGCCAAACGAGTGGGGAGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR CCA 90 bp | CCCTGCTGTCTAGTTTTCCTTTCGTGGGCTCCTGCACTGTACTGGTTACTTGTGCCTGCAGCGGCATCTTaGTATCTGTGTCTCTTTATG | + |
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Preference number: 2 (lower is better) Translates to: PCCLVFLSWAPALYWLLVPAAAS*YLCLFM Trigger: CATAAAGAGACACAGATACCAAGATGCCGCTGCAGG...CACAAGTAACCAGTACAGTGCAGGAGCCCACGAAAGGAAAACTAGACAGCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR TCA 90 bp | AAGCCAGATGAACCCTGTCTCCCCACTCGTTTGGCTTGTGGTGTTTATCACAGCGGTTTTTCTCCAGTGTaGGCTATTTCACATCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: KPDEPCLPTRLACGVYHSGFSPV*AISHLL Trigger: GAGAAGATGTGAAATAGCTCACACTGGAGAAAAACC...GCTGTGATAAACACCACAAGCCAAACGAGTGGGGAGACAGGGTTCATCTGGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCAGCTCACAACTACCAGCTTGCTCTAAGGTAGTAAGTGGTTTTCAACCTCACCAACCCACAGGTTaGGAAGCAATACTCATAAGG | + |
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Preference number: 2 (lower is better) Translates to: PGSSQLPACSKVVSGFQPHQPTG*EAILIR Trigger: CCTTATGAGTATTGCTTCTCAACCTGTGGGTTGGTG...AGGTTGAAAACCACTTACTACCTTAGAGCAAGCTGGTAGTTGTGAGCTGCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR CCA 90 bp | AAGCCAGATGAACCCTGTCTCCCCACTCGTTTGGCTTGTGGTGTTTATCACAGCGAGAAGGCATTTAATTaGGGGCTTGCTTACAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: KPDEPCLPTRLACGVYHSEKAFN*GLAYSF Trigger: GAAACTGTAAGCAAGCCCCCAATTAAATGCCTTCTC...GCTGTGATAAACACCACAAGCCAAACGAGTGGGGAGACAGGGTTCATCTGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR CAA 90 bp | CATCCTGATCCACAAAAACAGACACAAAGACCGAGAAACTGGATCTaGCACAGGCTTTTGAAACCTCCAAGTCCACCGCCAAGTCTTACA | + |
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Preference number: 2 (lower is better) Translates to: HPDPQKQTQRPRNWI*HRLLKPPSPPPSLT Trigger: TGTAAGACTTGGCGGTGGACTTGGAGGTTTCAAAAGCCTGTGCAAGATCCAGTTTCTCGGTCTTTGTGTCTGTTTTTGTGGATCAGGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR TCA 90 bp | GTCCATTATAGATGGTGCTATCCCTGGGCTGGTGGTCCTGGATTCTGTAAGAAAGGATTTCTCTCTGAATaGCAACTACCATGTCTCGAG | + |
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Preference number: 2 (lower is better) Translates to: VHYRWCYPWAGGPGFCKKGFLSE*QLPCLE Trigger: CTCGAGACATGGTAGTTGTCATTCAGAGAGAAATCC...TTTCTTACAGAATCCAGGACCACCAGCCCAGGGATAGCACCATCTATAATGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR TCA 90 bp | CTACCAGCTTGCTCTAAGGTAGTAAGTGGTTTTCAACCTTCCCAATGCGGTGACTGTAAGAAAGCAGGTTaGACAAGGCAGTGTGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: LPACSKVVSGFQPSQCGDCKKAG*TRQCEQ Trigger: TTGCTCACACTGCCTTGTTCAACCTGCTTTCTTACA...GTCACCGCATTGGGAAGGTTGAAAACCACTTACTACCTTAGAGCAAGCTGGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR GCA 90 bp | AAGCCAGATGAACCCTGTCTCCCCACTCGTTTGGCTTGTGGTGTTTATCACAGCCATTTCTCCAGTGTCTaGTCCCATATATTAGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: KPDEPCLPTRLACGVYHSHFSSV*SHILEE Trigger: CTCTTCTAATATATGGGAGCAGACACTGGAGAAATG...GCTGTGATAAACACCACAAGCCAAACGAGTGGGGAGACAGGGTTCATCTGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGGCAGCTCACAACTACCAGCTTGCTCTAAGGTAGTAAGTGGTTTTCAACCTATGAGATTGCCAACCTaGGCACATTTGGGAAACAAA | + |
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Preference number: 2 (lower is better) Translates to: PGSSQLPACSKVVSGFQPMRLPT*AHLGNK Trigger: TTTGTTTCCCAAATGTGCTCAGGTTGGCAATCTCAT...AGGTTGAAAACCACTTACTACCTTAGAGCAAGCTGGTAGTTGTGAGCTGCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR GCA 90 bp | CTGTCTCCCCACTCGTTTGGCTTGTGGTGTTTATCACAGCCATACTCACCCACTATAAGGGAAAGTGCTTaGTTAACATGCAGTAAATGG | + |
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Preference number: 2 (lower is better) Translates to: LSPHSFGLWCLSQPYSPTIRESA*LTCSKW Trigger: CCATTTACTGCATGTTAAGCAAGCACTTTCCCTTAT...AGTGGGTGAGTATGGCTGTGATAAACACCACAAGCCAAACGAGTGGGGAGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCAGCTCACAACTACCAGCTTGCTCTAAGGTAGTAAGTGGTTTTCAACCTGACAGCTCTGAAACTTaGAATCCTTCTCACAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: PGSSQLPACSKVVSGFQPDSSET*NPSHKL Trigger: AAGCTTGTGAGAAGGATTCCAAGTTTCAGAGCTGTC...AGGTTGAAAACCACTTACTACCTTAGAGCAAGCTGGTAGTTGTGAGCTGCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR CCA 90 bp | CTACCCAATAGTCAAAGAGCTCACCAAGTCAACCTGCAGCGGCATCTTGGTATCAGCTTGCCTGGTATGTaGTTTTTGACTCAAACTTTC | + |
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Preference number: 2 (lower is better) Translates to: LPNSQRAHQVNLQRHLGISLPGM*FLTQTF Trigger: GAAAGTTTGAGTCAAAAACCACATACCAGGCAAGCT...GATACCAAGATGCCGCTGCAGGTTGACTTGGTGAGCTCTTTGACTATTGGGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR CAA 90 bp | TTTTTGTTGAGAAGGAGGGTTGTTAAAAGGCCACCAACCCACAGGTaGAGAAGCAATACTCATAAGGCATCTAATGGCTTTCTGGACTCG | + |
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Preference number: 2 (lower is better) Translates to: FLLRRRVVKRPPTHR*RSNTHKASNGFLDS Trigger: CGAGTCCAGAAAGCCATTAGATGCCTTATGAGTATTGCTTCTCAACCTGTGGGTTGGTGGCCTTTTAACAACCCTCCTTCTCAACAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR TCA 90 bp | TATACTGAAGCTGCTCTTAGGCAGGGGCACTGTCAGAAACTAATAATATGTAGTCACAGACTTGGTGGATaGGACTGTCTGACCAAAATC | + |
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Preference number: 2 (lower is better) Translates to: YTEAALRQGHCQKLIICSHRLGG*DCLTKI Trigger: GATTTTGGTCAGACAGTCTCATCCACCAAGTCTGTG...ACTACATATTATTAGTTTCTGACAGTGCCCCTGCCTAAGAGCAGCTTCAGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR TCA 90 bp | TCCTTGAGATTTCCTCTGGGCTCACTTATTATTATCAGGATACAATCCCCCAAAACACCCAGACAGCTCTaGAACTTGGAATCCTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: SLRFPLGSLIIIRIQSPKTPRQL*NLESFS Trigger: TGAGAAGGATTCCAAGTTTCAGAGCTGTCTGGGTGT...TTTGGGGGATTGTATCCTGATAATAATAAGTGAGCCCAGAGGAAATCTCAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR TCA 90 bp | CAAACTCCTTATGTTTATACAATGGCTGTCCATGTTCTTGGTCTTCATAAGGTCTGGCACACCCAGAGATaGATGGCCAATTCTACCTTC | + |
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Preference number: 2 (lower is better) Translates to: QTPYVYTMAVHVLGLHKVWHTQR*MANSTF Trigger: GAAGGTAGAATTGGCCATTCATCTCTGGGTGTGCCA...GACCTTATGAAGACCAAGAACATGGACAGCCATTGTATAAACATAAGGAGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235054.2 |
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| 3UTR-3UTR GCA 90 bp | ACACTAGAACACACTTCCTTCAAGACCTATAGTTTGCCTATAGCTTGCCTGGTATTTCATCACGTGGCTTaGAGCATTTCTCCAGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: TLEHTSFKTYSLPIACLVFHHVA*SISPVS Trigger: AGACACTGGAGAAATGCTGCAAGCCACGTGATGAAA...TACCAGGCAAGCTATAGGCAAACTATAGGTCTTGAAGGAAGTGTGTTCTAGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR GCA 90 bp | CTACCAGCTTGCTCTAAGGTAGTAAGTGGTTTTCAACCTTCCCAATGCGGTGACTTACAGTTTCAGAGATaGAGACCATTAGCATCATGT | + |
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Preference number: 2 (lower is better) Translates to: LPACSKVVSGFQPSQCGDLQFQR*RPLASC Trigger: ACATGATGCTAATGGTCTGCATCTCTGAAACTGTAA...GTCACCGCATTGGGAAGGTTGAAAACCACTTACTACCTTAGAGCAAGCTGGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR GCA 90 bp | ACACTAGAACACACTTCCTTCAAGACCTATAGTTTGCCTATAGCTTGCCTGGTAAGAAATCTCCCCACATaGTTTCCAATGCTAGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: TLEHTSFKTYSLPIACLVRNLPT*FPMLGV Trigger: AACCCCTAGCATTGGAAAGCATGTGGGGAGATTTCT...TACCAGGCAAGCTATAGGCAAACTATAGGTCTTGAAGGAAGTGTGTTCTAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR CAA 90 bp | ATCTTCTCCACAATGAAAAGAACGCTGAGGATTTCATCACGTGGCTaGCAGCATTTCTCCAGTGTCTGCTCCCATATATTAGAAGAGAAT | + |
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Preference number: 2 (lower is better) Translates to: IFSTMKRTLRISSRG*QHFSSVCSHILEEN Trigger: ATTCTCTTCTAATATATGGGAGCAGACACTGGAGAAATGCTGCAAGCCACGTGATGAAATCCTCAGCGTTCTTTTCATTGTGGAGAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR TCA 90 bp | TATTTCTTTTTAATTGCGTTTACACGTGCAGGACTGTGTGTGGGTCTGAATTGTTTGAACAAGGCAGTGTaGGCAAGCAGTAGTAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: YFFLIAFTRAGLCVGLNCLNKAV*ASSSKQ Trigger: CTGCTTACTACTGCTTGCTCACACTGCCTTGTTCAA...ACAATTCAGACCCACACACAGTCCTGCACGTGTAAACGCAATTAAAAAGAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR-3UTR TCA 90 bp | TCCTTGAGATTTCCTCTGGGCTCACTTATTATTATCAGGATACAATCCCCCAAACTACTTCATGCAGTTTaGCTTAGTGAGAACTACCAC | + |
|
Preference number: 2 (lower is better) Translates to: SLRFPLGSLIIIRIQSPKLLHAV*LSENYH Trigger: GTGGTAGTTCTCACTAAGTCAAACTGCATGAAGTAG...TTTGGGGGATTGTATCCTGATAATAATAAGTGAGCCCAGAGGAAATCTCAAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR-3UTR GCA 90 bp | ACACTAGAACACACTTCCTTCAAGACCTATAGTTTGCCTATAGCTTGCCTGGTACATTTCTCCAGTGTCTaGTCCCATATATTAGAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: TLEHTSFKTYSLPIACLVHFSSV*SHILEE Trigger: CTCTTCTAATATATGGGAGCAGACACTGGAGAAATG...TACCAGGCAAGCTATAGGCAAACTATAGGTCTTGAAGGAAGTGTGTTCTAGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR-3UTR TCA 90 bp | CTCCCTCTTCTGGATTGTATGAGGACAGCTACAGTGTACTTACATATAATAAATCTGAGAGCTACATCCTaGTCCACAAAAACAGACACA | + |
|
Preference number: 2 (lower is better) Translates to: LPLLDCMRTATVYLHIINLRATS*STKTDT Trigger: TGTGTCTGTTTTTGTGGATCAGGATGTAGCTCTCAG...ATTTATTATATGTAAGTACACTGTAGCTGTCCTCATACAATCCAGAAGAGGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR-3UTR TCA 90 bp | TATTTCTTTTTAATTGCGTTTACACGTGCAGGACTGTGTGTGGGTCTGAATTGTACTGTTCTATTGCTGTaGAGAGACACCATGACAAAG | + |
|
Preference number: 2 (lower is better) Translates to: YFFLIAFTRAGLCVGLNCTVLLL*RDTMTK Trigger: CTTTGTCATGGTGTCTCTTCACAGCAATAGAACAGT...ACAATTCAGACCCACACACAGTCCTGCACGTGTAAACGCAATTAAAAAGAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR CAA 90 bp | CTTGCCTGGTATGTGGTTTTTGACTCAAACTTTCTAAAACAGTCCTaGAGATTTCCTCTGGGCTCACTTATTATTATCAGGATACAATCC | + |
|
Preference number: 2 (lower is better) Translates to: LAWYVVFDSNFLKQS*RFPLGSLIIIRIQS Trigger: GGATTGTATCCTGATAATAATAAGTGAGCCCAGAGGAAATCTCAAGGACTGTTTTAGAAAGTTTGAGTCAAAAACCACATACCAGGCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR-3UTR TCA 90 bp | CTCCCTCTTCTGGATTGTATGAGGACAGCTACAGTGTACTTACATATAATAAATTACACCTCACACCTCTaGAAAGTTCACATCTACTCT | + |
|
Preference number: 2 (lower is better) Translates to: LPLLDCMRTATVYLHIINYTSHL*KVHIYS Trigger: AGAGTAGATGTGAACTTTTCAGAGGTGTGAGGTGTA...ATTTATTATATGTAAGTACACTGTAGCTGTCCTCATACAATCCAGAAGAGGGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCTCTTCTGGATTGTATGAGGACAGCTACAGTGTACTTACATATAATAAATAGCTTGCCTGGTATGTaGTTTTTGACTCAAACTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LPLLDCMRTATVYLHIINSLPGM*FLTQTF Trigger: GAAAGTTTGAGTCAAAAACCACATACCAGGCAAGCT...ATTTATTATATGTAAGTACACTGTAGCTGTCCTCATACAATCCAGAAGAGGGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCTCTTCTGGATTGTATGAGGACAGCTACAGTGTACTTACATATAATAAATATCTGTGTCTCTTTATaGTTAGAACGCCTAGTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LPLLDCMRTATVYLHIINICVSL*LERLVV Trigger: CACAACTAGGCGTTCTAACCATAAAGAGACACAGAT...ATTTATTATATGTAAGTACACTGTAGCTGTCCTCATACAATCCAGAAGAGGGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR TCA 72 bp | ATCCTTCTCACAAGCTTCCCAAGTAGGACACATGCCTaGGCCACCACACCTGGGGACAACTTCACCAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ILLTSFPSRTHA*ATTPGDNFTRG Trigger: CCCTCTGGTGAAGTTGTCCCCAGGTGTGGTGGCTCAGGCATGTGTCCTACTTGGGAAGCTTGTGAGAAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR CCA 72 bp | GTTTGCCTGGAGACGTGGCTTAGTGGTCAGGAGCACTaGCGTTTCAGAGTCCCTGGCGTTAACTCCCAACAT | + |
|
Preference number: 3 (lower is better) Translates to: VCLETWLSGQEH*RFRVPGVNSQH Trigger: ATGTTGGGAGTTAACGCCAGGGACTCTGAAACGCCAGTGCTCCTGACCACTAAGCCACGTCTCCAGGCAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR TCA 72 bp | GCCAACCTGAGCACATTTGGGAAACAAAGCTGGTCTTaGCAGGTTGGCGAGTCATACACAGGCCCTGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: ANLSTFGKQSWS*QVGESYTGPAV Trigger: GACAGCAGGGCCTGTGTATGACTCGCCAACCTGTCAAGACCAGCTTTGTTTCCCAAATGTGCTCAGGTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTTGCCTGGAGACGTGGCTTAGTGGTCAGGAGCACTGGCGTTTCAGAGTCCCTCCGAGAAACTGGATCTaGCACAGGCTTTTGAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: VCLETWLSGQEHWRFRVPPRNWI*HRLLKP Trigger: AGGTTTCAAAAGCCTGTGCAAGATCCAGTTTCTCGG...AGGGACTCTGAAACGCCAGTGCTCCTGACCACTAAGCCACGTCTCCAGGCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR TCA 72 bp | TCTCTGAATGACAACTACCATGTCTCGAGGGCCCCCTaGGAACTAAGGGCTTTCCACATGGCCTGCATAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLNDNYHVSRAP*ELRAFHMACIR Trigger: CCTTATGCAGGCCATGTGGAAAGCCCTTAGTTCTCAGGGGGCCCTCGAGACATGGTAGTTGTCATTCAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR TCA 72 bp | TGGGCTGGTGGTCCTGGATTCTGTAAGAAAGCAGGTTaGACAAGGCAGTGTGAGCAAGCAGTAGTAAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: WAGGPGFCKKAG*TRQCEQAVVSS Trigger: GCTGCTTACTACTGCTTGCTCACACTGCCTTGTTCAACCTGCTTTCTTACAGAATCCAGGACCACCAGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR GCA 72 bp | CAGGCCCTGCTGTCTAGTTTTCCTTTCGTGGGCTCCTaGACTGTACTGGTTACTTGTGACAACTTGACACAG | + |
|
Preference number: 3 (lower is better) Translates to: QALLSSFPFVGS*TVLVTCDNLTQ Trigger: CTGTGTCAAGTTGTCACAAGTAACCAGTACAGTGCAGGAGCCCACGAAAGGAAAACTAGACAGCAGGGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR GCA 72 bp | GTTCCCAGCACCCCTGGCAGCTCACAACTACCAGCTTaGTCTAAGGTAGTAAGTGGTTTTCAACCTTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: VPSTPGSSQLPA*SKVVSGFQPSQ Trigger: TTGGGAAGGTTGAAAACCACTTACTACCTTAGAGCAAGCTGGTAGTTGTGAGCTGCCAGGGGTGCTGGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR CCA 72 bp | TCAGAGTCCCTGGCGTTAACTCCCAACATCCCAACATaGAGGTTCAAACCATCTGTAACTCCACTTCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SESLALTPNIPT*RFKPSVTPLPG Trigger: CCCAGGAAGTGGAGTTACAGATGGTTTGAACCTCCATGTTGGGATGTTGGGAGTTAACGCCAGGGACTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR TCA 72 bp | GTCTGGGAACTTACGCAGTCGCTGAGAGCTACATCCTaGTCCACAAAAACAGACACAAAGACCGAGAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: VWELTQSLRATS*STKTDTKTEKL Trigger: CAGTTTCTCGGTCTTTGTGTCTGTTTTTGTGGATCAGGATGTAGCTCTCAGCGACTGCGTAAGTTCCCAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR TCA 72 bp | CAGGAAGGCTTGATTCTGGGTATGAGATTGCCAACCTaGGCACATTTGGGAAACAAAGCTGGTCTTGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: QEGLILGMRLPT*AHLGNKAGLDR Trigger: CCTGTCAAGACCAGCTTTGTTTCCCAAATGTGCTCAGGTTGGCAATCTCATACCCAGAATCAAGCCTTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR GCA 72 bp | ACTTCACACGGTGATGACAGAATAAGGCATGAGCATTaGAGTGAGTGTGAGAACATCCTGCCTGGGCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: TSHGDDRIRHEH*SECENILPGLH Trigger: ATGTAGCCCAGGCAGGATGTTCTCACACTCACTGCAATGCTCATGCCTTATTCTGTCATCACCGTGTGAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGCTGTCTAGTTTTCCTTTCGTGGGCTCCTGCACTGTACTGGTTACTTGTGTTTCTAAAACAGTCCTaGAGATTTCCTCTGGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PCCLVFLSWAPALYWLLVFLKQS*RFPLGS Trigger: TGAGCCCAGAGGAAATCTCAAGGACTGTTTTAGAAA...CACAAGTAACCAGTACAGTGCAGGAGCCCACGAAAGGAAAACTAGACAGCAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR-3UTR CAA 90 bp | CTACCAGCTTGCTCTAAGGTAGTAAGTGGTTTTCAACCTTCCCAATGCGGTGACCCACCAACCCACAGGTaGAGAAGCAATACTCATAAG | + |
|
Preference number: 3 (lower is better) Translates to: LPACSKVVSGFQPSQCGDPPTHR*RSNTHK Trigger: CTTATGAGTATTGCTTCTCAACCTGTGGGTTGGTGG...GTCACCGCATTGGGAAGGTTGAAAACCACTTACTACCTTAGAGCAAGCTGGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR GCA 72 bp | GACTACCCAATAGTCAAAGAGCTCACCAAGTCAACCTaGAGCGGCATCTTGGTATCTGTGTCTCTTTATGGT | + |
|
Preference number: 3 (lower is better) Translates to: DYPIVKELTKST*SGILVSVSLYG Trigger: ACCATAAAGAGACACAGATACCAAGATGCCGCTGCAGGTTGACTTGGTGAGCTCTTTGACTATTGGGTAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR CCA 72 bp | TCAAAGAGCTCACCAAGTCAACCTGCAGCGGCATCTTaGTATCTGTGTCTCTTTATGGTTAGAACGCCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: SKSSPSQPAAAS*YLCLFMVRTPS Trigger: ACTAGGCGTTCTAACCATAAAGAGACACAGATACCAAGATGCCGCTGCAGGTTGACTTGGTGAGCTCTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR-3UTR CAA 90 bp | GGGCTACATAGCACAAACCAAGTTATCTGGCAGTTGTTAGCTAGTTGTTTGCCTATTTCATCACGTGGCTaGCAGCATTTCTCCAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: GLHSTNQVIWQLLASCLPISSRG*QHFSSV Trigger: GACACTGGAGAAATGCTGCAAGCCACGTGATGAAAT...AGGCAAACAACTAGCTAACAACTGCCAGATAACTTGGTTTGTGCTATGTAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR-3UTR CAA 90 bp | GGGCTACATAGCACAAACCAAGTTATCTGGCAGTTGTTAGCTAGTTGTTTGCCTCCGAGAAACTGGATCTaGCACAGGCTTTTGAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: GLHSTNQVIWQLLASCLPPRNWI*HRLLKP Trigger: AGGTTTCAAAAGCCTGTGCAAGATCCAGTTTCTCGG...AGGCAAACAACTAGCTAACAACTGCCAGATAACTTGGTTTGTGCTATGTAGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR-3UTR CAA 90 bp | CTACCAGCTTGCTCTAAGGTAGTAAGTGGTTTTCAACCTTCCCAATGCGGTGACCAAGTTATCTGGCAGTaGTTAGCTAGTTGTTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LPACSKVVSGFQPSQCGDQVIWQ*LASCLP Trigger: AGGCAAACAACTAGCTAACAACTGCCAGATAACTTG...GTCACCGCATTGGGAAGGTTGAAAACCACTTACTACCTTAGAGCAAGCTGGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR TCA 72 bp | ACCATTAGCATCATGTCTGGGAACTTACGCAGTCGCTaGGAGCTACATCCTGATCCACAAAAACAGACACAA | + |
|
Preference number: 3 (lower is better) Translates to: TISIMSGNLRSR*ELHPDPQKQTQ Trigger: TTGTGTCTGTTTTTGTGGATCAGGATGTAGCTCTCAGCGACTGCGTAAGTTCCCAGACATGATGCTAATGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR TCA 72 bp | GAAGGAGGGTTGTTAAAAGGCCACCAACCCACAGGTTaGGAAGCAATACTCATAAGGCATCTAATGGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: EGGLLKGHQPTG*EAILIRHLMAF Trigger: GAAAGCCATTAGATGCCTTATGAGTATTGCTTCTCAACCTGTGGGTTGGTGGCCTTTTAACAACCCTCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR TCA 72 bp | AGGTCCTACCAGATGGTTCAATGGCACACCCAGAGATaGATGGCCAATTCTACCTTCTTCACAGAGATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RSYQMVQWHTQR*MANSTFFTEIL Trigger: AAGAATCTCTGTGAAGAAGGTAGAATTGGCCATTCATCTCTGGGTGTGCCATTGAACCATCTGGTAGGACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235054.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGCAGCTCACAACTACCAGCTTGCTCTAAGGTAGTAAGTGGTTTTCAACCTAATAAACAGGAAGGCTaGATTCTGGGTATGAGATTG | + |
|
Preference number: 3 (lower is better) Translates to: PGSSQLPACSKVVSGFQPNKQEG*ILGMRL Trigger: CAATCTCATACCCAGAATCAAGCCTTCCTGTTTATT...AGGTTGAAAACCACTTACTACCTTAGAGCAAGCTGGTAGTTGTGAGCTGCCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR CCA 72 bp | CCTACCAGATGGTTCAATGGCACACCCAGAGATGAATaGCCAATTCTACCTTCTTCACAGAGATTCTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: PTRWFNGTPRDE*PILPSSQRFFS Trigger: TGAAAAGAATCTCTGTGAAGAAGGTAGAATTGGCCATTCATCTCTGGGTGTGCCATTGAACCATCTGGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235054.2 |
||
| 3UTR-3UTR CAA 90 bp | TATACTGAAGCTGCTCTTAGGCAGGGGCACTGTCAGAAACTAATAATATGTAGTATTTCATCACGTGGCTaGCAGCATTTCTCCAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: YTEAALRQGHCQKLIICSISSRG*QHFSSV Trigger: GACACTGGAGAAATGCTGCAAGCCACGTGATGAAAT...ACTACATATTATTAGTTTCTGACAGTGCCCCTGCCTAAGAGCAGCTTCAGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR TCA 72 bp | AATCACCACATTATATATGAAGGATTTCTCTCTGAATaGCAACTACCATGTCTCGAGGGCCCCCTGAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: NHHIIYEGFLSE*QLPCLEGPLRT Trigger: AGTTCTCAGGGGGCCCTCGAGACATGGTAGTTGTCATTCAGAGAGAAATCCTTCATATATAATGTGGTGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR-3UTR CAA 90 bp | ACACTAGAACACACTTCCTTCAAGACCTATAGTTTGCCTATAGCTTGCCTGGTATTTCTAAAACAGTCCTaGAGATTTCCTCTGGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TLEHTSFKTYSLPIACLVFLKQS*RFPLGS Trigger: TGAGCCCAGAGGAAATCTCAAGGACTGTTTTAGAAA...TACCAGGCAAGCTATAGGCAAACTATAGGTCTTGAAGGAAGTGTGTTCTAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR GCA 72 bp | TGTTTGTATGCATCTGAAGGGACAGAGAATTGGAGCTaGTCTCAAACTCCTTATGTTTATACAATGGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: CLYASEGTENWS*SQTPYVYTMAV Trigger: GACAGCCATTGTATAAACATAAGGAGTTTGAGAGCAGCTCCAATTCTCTGTCCCTTCAGATGCATACAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235054.2 |
||
| 3UTR CCA 72 bp | ATTGGAGCTGCTCTCAAACTCCTTATGTTTATACAATaGCTGTCCATGTTCTTGGTCTTCATAAGGTCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: IGAALKLLMFIQ*LSMFLVFIRSY Trigger: GTAGGACCTTATGAAGACCAAGAACATGGACAGCCATTGTATAAACATAAGGAGTTTGAGAGCAGCTCCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235054.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCTCTTCTGGATTGTATGAGGACAGCTACAGTGTACTTACATATAATAAATCTGTCCCGACTCCCTTaGATGATGCACTGTGATTTT | + |
|
Preference number: 3 (lower is better) Translates to: LPLLDCMRTATVYLHIINLSRLP*MMHCDF Trigger: AAAATCACAGTGCATCATCAAAGGGAGTCGGGACAG...ATTTATTATATGTAAGTACACTGTAGCTGTCCTCATACAATCCAGAAGAGGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR TCA 72 bp | GTTACTTGTGACAACTTGACACAGGCTAGAGTCATTTaGGAAGAGGGAACCAACATTGAGAAAATGCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: VTCDNLTQARVI*EEGTNIEKMLQ Trigger: TTGAAGCATTTTCTCAATGTTGGTTCCCTCTTCTCAAATGACTCTAGCCTGTGTCAAGTTGTCACAAGTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR CCA 72 bp | TGTGAGTGTTTGTATGCATCTGAAGGGACAGAGAATTaGAGCTGCTCTCAAACTCCTTATGTTTATACAATG | + |
|
Preference number: 3 (lower is better) Translates to: CECLYASEGTEN*SCSQTPYVYTM Trigger: CATTGTATAAACATAAGGAGTTTGAGAGCAGCTCCAATTCTCTGTCCCTTCAGATGCATACAAACACTCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235054.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCTCTTCTGGATTGTATGAGGACAGCTACAGTGTACTTACATATAATAAATCATTTAATTGGGGGCTaGCTTACAGTTTCAGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: LPLLDCMRTATVYLHIINHLIGG*LTVSEM Trigger: CATCTCTGAAACTGTAAGCAAGCCCCCAATTAAATG...ATTTATTATATGTAAGTACACTGTAGCTGTCCTCATACAATCCAGAAGAGGGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR GCA 72 bp | CCACGAAGACTAGACACGTATATAAGGGAAAGTGCTTaGTTAACATGCAGTAAATGGGCAATTGAGTATTTT | + |
|
Preference number: 3 (lower is better) Translates to: PRRLDTYIRESA*LTCSKWAIEYF Trigger: AAAATACTCAATTGCCCATTTACTGCATGTTAAGCAAGCACTTTCCCTTATATACGTGTCTAGTCTTCGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR CCA 90 bp | GCCTGGAGACGTGGCTTAGTGGTCAGGAGCACTGGCGTTTCAGAGTCCCTGGCGTTGTACAGCTTCTTCTaGGATGGATCCAGCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AWRRGLVVRSTGVSESLALYSFF*DGSSTA Trigger: GGCTGTGCTGGATCCATCCCAGAAGAAGCTGTACAA...CGCCAGGGACTCTGAAACGCCAGTGCTCCTGACCACTAAGCCACGTCTCCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR TCA 90 bp | GCCTGGAGACGTGGCTTAGTGGTCAGGAGCACTGGCGTTTCAGAGTCCCTGGCGAGGAACTGTGATTGTTaGATGACTTCCCACACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AWRRGLVVRSTGVSESLARNCDC*MTSHTA Trigger: AGCAGTGTGGGAAGTCATTCAACAATCACAGTTCCT...CGCCAGGGACTCTGAAACGCCAGTGCTCCTGACCACTAAGCCACGTCTCCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR TCA 90 bp | CAGGATACAATCCCCCAAAGGGGAGCCCAGTTTCCCTGGGAATACCAGGACCTCGAGAGCTGTCTGAACTaGAAGCTTTCCCGCATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QDTIPQRGAQFPWEYQDLESCLN*KLSRIA Trigger: TGCAATGCGGGAAAGCTTTCAGTTCAGACAGCTCTC...GAGGTCCTGGTATTCCCAGGGAAACTGGGCTCCCCTTTGGGGGATTGTATCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR GCA 90 bp | CCCAAAGGGGAGCCCAGTTTCCCTGGGAATACCAGGACCTCAATACACCCAGACAGGGTTTCTCGCCATTaGGGACACTCGTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PKGEPSFPGNTRTSIHPDRVSRH*GHSFFF Trigger: GAAGAAGAACGAGTGTCCGCAATGGCGAGAAACCCT...GTCTGGGTGTATTGAGGTCCTGGTATTCCCAGGGAAACTGGGCTCCCCTTTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR TCA 90 bp | GTTTGCCTGGAGACGTGGCTTAGTGGTCAGGAGCACTGGCGTTTCAGAGTCCCTTTTCATTATAGTCACTaGATTTCCCCGCCAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VCLETWLSGQEHWRFRVPFHYSH*ISPPGG Trigger: GCCACCTGGCGGGGAAATTCAGTGACTATAATGAAA...AGGGACTCTGAAACGCCAGTGCTCCTGACCACTAAGCCACGTCTCCAGGCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR CAA 72 bp | TGCCAACCTGAGCACATTTGGGAAACAAAGCTGGTCTaGACAGGTTGGCGAGTCATACACAGGCCCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CQPEHIWETKLV*TGWRVIHRPCC Trigger: ACAGCAGGGCCTGTGTATGACTCGCCAACCTGTCAAGACCAGCTTTGTTTCCCAAATGTGCTCAGGTTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR TCA 90 bp | AAGCCAGATGAACCCTGTCTCCCCACTCGTTTGGCTTGTGGTGTTTATCACAGCCCGAAGAGAGCTGTCTaGACTGAAAGCTTTCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPDEPCLPTRLACGVYHSPKRAV*TESFPA Trigger: TGCGGGAAAGCTTTCAGTTCAGACAGCTCTCTTCGG...GCTGTGATAAACACCACAAGCCAAACGAGTGGGGAGACAGGGTTCATCTGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR TCA 90 bp | CTGTCTCCCCACTCGTTTGGCTTGTGGTGTTTATCACAGCCATACTCACCCACTCCGAAGAGAGCTGTCTaGACTGAAAGCTTTCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSPHSFGLWCLSQPYSPTPKRAV*TESFPA Trigger: TGCGGGAAAGCTTTCAGTTCAGACAGCTCTCTTCGG...AGTGGGTGAGTATGGCTGTGATAAACACCACAAGCCAAACGAGTGGGGAGACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR CCA 90 bp | GAGGGCCCCCTGAGAACTAAGGGCTTTCCACATGGCCTGCATAAGGTTTTTCTCCCGACTTGTTTCCTATaGAAGCCAGGTTCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EGPLRTKGFPHGLHKVFLPTCFL*KPGSSG Trigger: CCCTGAAGAACCTGGCTTCCATAGGAAACAAGTCGG...GAGAAAAACCTTATGCAGGCCATGTGGAAAGCCCTTAGTTCTCAGGGGGCCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR TCA 90 bp | CTACCCAATAGTCAAAGAGCTCACCAAGTCAACCTGCAGCGGCATCTTGGTATCACTGATACCAAAATGTaGAGGCGCCCCCACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPNSQRAHQVNLQRHLGITDTKM*RRPHRA Trigger: AGCTCTGTGGGGGCGCCTTCACATTTTGGTATCAGT...GATACCAAGATGCCGCTGCAGGTTGACTTGGTGAGCTCTTTGACTATTGGGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR CCA 90 bp | GAGCCACCACACCTGGGGACAACTTCACCAGAGGGGGCACACAGACTTGGTGGACTTATGTTTATACAATaGCTGTCCATGTTCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EPPHLGTTSPEGAHRLGGLMFIQ*LSMFLV Trigger: GACCAAGAACATGGACAGCCATTGTATAAACATAAG...TCCACCAAGTCTGTGTGCCCCCTCTGGTGAAGTTGTCCCCAGGTGTGGTGGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR TCA 90 bp | CTGTCTCCCCACTCGTTTGGCTTGTGGTGTTTATCACAGCCATACTCACCCACTTTTCATTATAGTCACTaGATTTCCCCGCCAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSPHSFGLWCLSQPYSPTFHYSH*ISPPGG Trigger: GCCACCTGGCGGGGAAATTCAGTGACTATAATGAAA...AGTGGGTGAGTATGGCTGTGATAAACACCACAAGCCAAACGAGTGGGGAGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR TCA 90 bp | CCAAGTCCACCGCCAAGTCTTACACCTCACACCTCTGAAAAGTTCACATCTACTACTGATACCAAAATGTaGAGGCGCCCCCACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSPPPSLTPHTSEKFTSTTDTKM*RRPHRA Trigger: AGCTCTGTGGGGGCGCCTTCACATTTTGGTATCAGT...AGTAGATGTGAACTTTTCAGAGGTGTGAGGTGTAAGACTTGGCGGTGGACTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR TCA 90 bp | CCCCACTCGTTTGGCTTGTGGTGTTTATCACAGCCATACTCACCCACTAAATCATTCCTTTCGTGGCTCTaGAGGGAGGAGGAAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PHSFGLWCLSQPYSPTKSFLSWL*REEEEA Trigger: AGCTTCTTCCTCCTCCCTTCAGAGCCACGAAAGGAA...TGATTTAGTGGGTGAGTATGGCTGTGATAAACACCACAAGCCAAACGAGTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR CCA 90 bp | GTTTGCCTGGAGACGTGGCTTAGTGGTCAGGAGCACTGGCGTTTCAGAGTCCCTGTGTTTTTAGGGAACTaGAATAAGGAAAGCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VCLETWLSGQEHWRFRVPVFLGN*NKESPF Trigger: GAAAGGGCTTTCCTTATTCCAGTTCCCTAAAAACAC...AGGGACTCTGAAACGCCAGTGCTCCTGACCACTAAGCCACGTCTCCAGGCAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR CAA 72 bp | GAGCAGTGCTCCCAGAGGCTTCCAATAGAACCACGTTaGCCATCCATGCTGCTGTACAGATGTTTCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: EQCSQRLPIEPR*PSMLLYRCFSL Trigger: CAAAGAGAAACATCTGTACAGCAGCATGGATGGCAAACGTGGTTCTATTGGAAGCCTCTGGGAGCACTGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR TCA 90 bp | CAATGCTGTCTTCTGGCCTCATTGGGCACCAGGTACACATACACAGAACAGATATGGCACACCCAGAGATaGATGGCCAATTCTACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QCCLLASLGTRYTYTEQIWHTQR*MANSTF Trigger: GAAGGTAGAATTGGCCATTCATCTCTGGGTGTGCCA...TATCTGTTCTGTGTATGTGTACCTGGTGCCCAATGAGGCCAGAAGACAGCATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR TCA 90 bp | CTACCCAATAGTCAAAGAGCTCACCAAGTCAACCTGCAGCGGCATCTTGGTATCGGCTTCTTAACGCTGTaGCTCTTCTCATGCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPNSQRAHQVNLQRHLGIGFLTL*LFSCLC Trigger: ACAAAGGCATGAGAAGAGTCACAGCGTTAAGAAGCC...GATACCAAGATGCCGCTGCAGGTTGACTTGGTGAGCTCTTTGACTATTGGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR TCA 90 bp | CCCTGCTGTCTAGTTTTCCTTTCGTGGGCTCCTGCACTGTACTGGTTACTTGTGCCTGTGTCAGTTCTCTaGTGCCTTAAAAGGTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: PCCLVFLSWAPALYWLLVPVSVL*CLKRLP Trigger: TGGTAACCTTTTAAGGCATCAGAGAACTGACACAGG...CACAAGTAACCAGTACAGTGCAGGAGCCCACGAAAGGAAAACTAGACAGCAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR GCA 90 bp | CAGGATACAATCCCCCAAAGGGGAGCCCAGTTTCCCTGGGAATACCAGGACCTCGCAGTTGAAGATGTCTaGACACTGATGATTTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: QDTIPQRGAQFPWEYQDLAVEDV*TLMIFI Trigger: AATGAAAATCATCAGTGTGCAGACATCTTCAACTGC...GAGGTCCTGGTATTCCCAGGGAAACTGGGCTCCCCTTTGGGGGATTGTATCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR GCA 90 bp | CAGGATACAATCCCCCAAAGGGGAGCCCAGTTTCCCTGGGAATACCAGGACCTCACTAGCATCCTTTTCTaGTCTACTATGAATTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QDTIPQRGAQFPWEYQDLTSILF*STMNWY Trigger: GTACCAATTCATAGTAGAGCAGAAAAGGATGCTAGT...GAGGTCCTGGTATTCCCAGGGAAACTGGGCTCCCCTTTGGGGGATTGTATCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR CCA 90 bp | TGGCTGTCCATGTTCTTGGTCTTCATAAGGTCCTACCAGATGGTTCAATGGCACTTGTACAGCTTCTTCTaGGATGGATCCAGCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WLSMFLVFIRSYQMVQWHLYSFF*DGSSTA Trigger: GGCTGTGCTGGATCCATCCCAGAAGAAGCTGTACAA...GTGCCATTGAACCATCTGGTAGGACCTTATGAAGACCAAGAACATGGACAGCCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235054.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGCAGCTCACAACTACCAGCTTGCTCTAAGGTAGTAAGTGGTTTTCAACCTCCGACTTGTTTCCTATaGAAGCCAGGTTCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PGSSQLPACSKVVSGFQPPTCFL*KPGSSG Trigger: CCCTGAAGAACCTGGCTTCCATAGGAAACAAGTCGG...AGGTTGAAAACCACTTACTACCTTAGAGCAAGCTGGTAGTTGTGAGCTGCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR CCA 90 bp | CTACCCAATAGTCAAAGAGCTCACCAAGTCAACCTGCAGCGGCATCTTGGTATCAAATGTAGCACGTCCTaGACAAGATTGCAGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPNSQRAHQVNLQRHLGIKCSTS*TRLQAH Trigger: GTGAGCCTGCAATCTTGTCCAGGACGTGCTACATTT...GATACCAAGATGCCGCTGCAGGTTGACTTGGTGAGCTCTTTGACTATTGGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR CAA 72 bp | CCACAAAAACAGACACAAAGACCGAGAAACTGGATCTaGCACAGGCTTTTGAAACCTCCAAGTCCACCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PQKQTQRPRNWI*HRLLKPPSPPP Trigger: TGGCGGTGGACTTGGAGGTTTCAAAAGCCTGTGCAAGATCCAGTTTCTCGGTCTTTGTGTCTGTTTTTGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR CAA 72 bp | AGTATAAAGCCAGATGAACCCTGTCTCCCCACTCGTTaGGCTTGTGGTGTTTATCACAGCCATACTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SIKPDEPCLPTR*ACGVYHSHTHP Trigger: TGGGTGAGTATGGCTGTGATAAACACCACAAGCCAAACGAGTGGGGAGACAGGGTTCATCTGGCTTTATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR TCA 90 bp | CTACCCAATAGTCAAAGAGCTCACCAAGTCAACCTGCAGCGGCATCTTGGTATCCCTGTGTCAGTTCTCTaGTGCCTTAAAAGGTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: LPNSQRAHQVNLQRHLGIPVSVL*CLKRLP Trigger: TGGTAACCTTTTAAGGCATCAGAGAACTGACACAGG...GATACCAAGATGCCGCTGCAGGTTGACTTGGTGAGCTCTTTGACTATTGGGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR GCA 90 bp | ACACTAGAACACACTTCCTTCAAGACCTATAGTTTGCCTATAGCTTGCCTGGTATGCAGGCTCACAGAGTaGCCTGGACTGCAGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLEHTSFKTYSLPIACLVCRLTE*PGLQLK Trigger: CTTCAACTGCAGTCCAGGGCACTCTGTGAGCCTGCA...TACCAGGCAAGCTATAGGCAAACTATAGGTCTTGAAGGAAGTGTGTTCTAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR CCA 90 bp | CCTGGCAGCTCACAACTACCAGCTTGCTCTAAGGTAGTAAGTGGTTTTCAACCTAAATGTAGCACGTCCTaGACAAGATTGCAGGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PGSSQLPACSKVVSGFQPKCSTS*TRLQAH Trigger: GTGAGCCTGCAATCTTGTCCAGGACGTGCTACATTT...AGGTTGAAAACCACTTACTACCTTAGAGCAAGCTGGTAGTTGTGAGCTGCCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR CCA 90 bp | TGGCCAATTCTACCTTCTTCACAGAGATTCTTTTCAAATGTAGCACGTCCTGGAAATTTCCCCGCCAGGTaGCTGCTATGGAAGCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WPILPSSQRFFSNVARPGNFPAR*LLWKPG Trigger: ACCTGGCTTCCATAGCAGCCACCTGGCGGGGAAATT...TCCAGGACGTGCTACATTTGAAAAGAATCTCTGTGAAGAAGGTAGAATTGGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235054.2 |
||
| CDS-3UTR TCA 90 bp | CCCCACTCGTTTGGCTTGTGGTGTTTATCACAGCCATACTCACCCACTAAATCAGTGTTTGTATGCATCTaGAGGGACAGAGAATTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PHSFGLWCLSQPYSPTKSVFVCI*RDRELE Trigger: CTCCAATTCTCTGTCCCTTCAGATGCATACAAACAC...TGATTTAGTGGGTGAGTATGGCTGTGATAAACACCACAAGCCAAACGAGTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR TCA 90 bp | CCAAGTCCACCGCCAAGTCTTACACCTCACACCTCTGAAAAGTTCACATCTACTAGGAACTGTGATTGTTaGATGACTTCCCACACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSPPPSLTPHTSEKFTSTRNCDC*MTSHTA Trigger: AGCAGTGTGGGAAGTCATTCAACAATCACAGTTCCT...AGTAGATGTGAACTTTTCAGAGGTGTGAGGTGTAAGACTTGGCGGTGGACTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR CCA 90 bp | GGGCTACATAGCACAAACCAAGTTATCTGGCAGTTGTTAGCTAGTTGTTTGCCTTTGTACAGCTTCTTCTaGGATGGATCCAGCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLHSTNQVIWQLLASCLPLYSFF*DGSSTA Trigger: GGCTGTGCTGGATCCATCCCAGAAGAAGCTGTACAA...AGGCAAACAACTAGCTAACAACTGCCAGATAACTTGGTTTGTGCTATGTAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR CAA 72 bp | CACAGGCTAGAGTCATTTGAGAAGAGGGAACCAACATaGAGAAAATGCTTCAAAACCGGGCTGAACGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HRLESFEKREPT*RKCFKTGLNAR Trigger: CCTTGCGTTCAGCCCGGTTTTGAAGCATTTTCTCAATGTTGGTTCCCTCTTCTCAAATGACTCTAGCCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR TCA 90 bp | GGGCTACATAGCACAAACCAAGTTATCTGGCAGTTGTTAGCTAGTTGTTTGCCTGGCTTCTTAACGCTGTaGCTCTTCTCATGCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLHSTNQVIWQLLASCLPGFLTL*LFSCLC Trigger: ACAAAGGCATGAGAAGAGTCACAGCGTTAAGAAGCC...AGGCAAACAACTAGCTAACAACTGCCAGATAACTTGGTTTGTGCTATGTAGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR TCA 90 bp | TATACTGAAGCTGCTCTTAGGCAGGGGCACTGTCAGAAACTAATAATATGTAGTTTCCTTTCGTGGCTCTaGAGGGAGGAGGAAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YTEAALRQGHCQKLIICSFLSWL*REEEEA Trigger: AGCTTCTTCCTCCTCCCTTCAGAGCCACGAAAGGAA...ACTACATATTATTAGTTTCTGACAGTGCCCCTGCCTAAGAGCAGCTTCAGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR GCA 90 bp | TATTTCTTTTTAATTGCGTTTACACGTGCAGGACTGTGTGTGGGTCTGAATTGTTGCAGGCTCACAGAGTaGCCTGGACTGCAGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YFFLIAFTRAGLCVGLNCCRLTE*PGLQLK Trigger: CTTCAACTGCAGTCCAGGGCACTCTGTGAGCCTGCA...ACAATTCAGACCCACACACAGTCCTGCACGTGTAAACGCAATTAAAAAGAAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR CCA 90 bp | CCCTGCTGTCTAGTTTTCCTTTCGTGGGCTCCTGCACTGTACTGGTTACTTGTGCTTATGTTTATACAATaGCTGTCCATGTTCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PCCLVFLSWAPALYWLLVLMFIQ*LSMFLV Trigger: GACCAAGAACATGGACAGCCATTGTATAAACATAAG...CACAAGTAACCAGTACAGTGCAGGAGCCCACGAAAGGAAAACTAGACAGCAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR CCA 90 bp | TCTCAAACTCCTTATGTTTATACAATGGCTGTCCATGTTCTTGGTCTTCATAAGGCCAGGTGGCTGCTATaGAAGCCAGGTTCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQTPYVYTMAVHVLGLHKARWLL*KPGSSG Trigger: CCCTGAAGAACCTGGCTTCCATAGCAGCCACCTGGC...CTTATGAAGACCAAGAACATGGACAGCCATTGTATAAACATAAGGAGTTTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235054.2 |
||
| CDS-3UTR TCA 90 bp | TATACTGAAGCTGCTCTTAGGCAGGGGCACTGTCAGAAACTAATAATATGTAGTTGGCACACCCAGAGATaGATGGCCAATTCTACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YTEAALRQGHCQKLIICSWHTQR*MANSTF Trigger: GAAGGTAGAATTGGCCATTCATCTCTGGGTGTGCCA...ACTACATATTATTAGTTTCTGACAGTGCCCCTGCCTAAGAGCAGCTTCAGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR GCA 90 bp | TCCTTGAGATTTCCTCTGGGCTCACTTATTATTATCAGGATACAATCCCCCAAAAGGGTTTCTCGCCATTaGGGACACTCGTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLRFPLGSLIIIRIQSPKRVSRH*GHSFFF Trigger: GAAGAAGAACGAGTGTCCGCAATGGCGAGAAACCCT...TTTGGGGGATTGTATCCTGATAATAATAAGTGAGCCCAGAGGAAATCTCAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR CAA 72 bp | AGAAGGAGGGTTGTTAAAAGGCCACCAACCCACAGGTaGAGAAGCAATACTCATAAGGCATCTAATGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RRRVVKRPPTHR*RSNTHKASNGF Trigger: AAAGCCATTAGATGCCTTATGAGTATTGCTTCTCAACCTGTGGGTTGGTGGCCTTTTAACAACCCTCCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR TCA 90 bp | CATCTGAAGGGACAGAGAATTGGAGCTGCTCTCAAACTCCTTATGTTTATACAATTTCATTATAGTCACTaGATTTCCCCGCCAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HLKGQRIGAALKLLMFIQFHYSH*ISPPGG Trigger: GCCACCTGGCGGGGAAATTCAGTGACTATAATGAAA...TTGTATAAACATAAGGAGTTTGAGAGCAGCTCCAATTCTCTGTCCCTTCAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235054.2 |
||
| CDS-3UTR TCA 90 bp | TATTTCTTTTTAATTGCGTTTACACGTGCAGGACTGTGTGTGGGTCTGAATTGTGAGAGCTGTCTGAACTaGAAGCTTTCCCGCATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: YFFLIAFTRAGLCVGLNCESCLN*KLSRIA Trigger: TGCAATGCGGGAAAGCTTTCAGTTCAGACAGCTCTC...ACAATTCAGACCCACACACAGTCCTGCACGTGTAAACGCAATTAAAAAGAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| 3UTR CAA 72 bp | ACAATGAAAAGAACGCTGAGGATTTCATCACGTGGCTaGCAGCATTTCTCCAGTGTCTGCTCCCATATATTA | + |
|
Preference number: 4 (lower is better) Translates to: TMKRTLRISSRG*QHFSSVCSHIL Trigger: TAATATATGGGAGCAGACACTGGAGAAATGCTGCAAGCCACGTGATGAAATCCTCAGCGTTCTTTTCATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR TCA 90 bp | TATTTCTTTTTAATTGCGTTTACACGTGCAGGACTGTGTGTGGGTCTGAATTGTGTGTTTGTATGCATCTaGAGGGACAGAGAATTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YFFLIAFTRAGLCVGLNCVFVCI*RDRELE Trigger: CTCCAATTCTCTGTCCCTTCAGATGCATACAAACAC...ACAATTCAGACCCACACACAGTCCTGCACGTGTAAACGCAATTAAAAAGAAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR GCA 90 bp | GGGCTACATAGCACAAACCAAGTTATCTGGCAGTTGTTAGCTAGTTGTTTGCCTGCAGTTGAAGATGTCTaGACACTGATGATTTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: GLHSTNQVIWQLLASCLPAVEDV*TLMIFI Trigger: AATGAAAATCATCAGTGTGCAGACATCTTCAACTGC...AGGCAAACAACTAGCTAACAACTGCCAGATAACTTGGTTTGTGCTATGTAGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
||
| CDS-3UTR GCA 90 bp | TATACAATGGCTGTCCATGTTCTTGGTCTTCATAAGGTCCTACCAGATGGTTCAGCAGTTGAAGATGTCTaGACACTGATGATTTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: YTMAVHVLGLHKVLPDGSAVEDV*TLMIFI Trigger: AATGAAAATCATCAGTGTGCAGACATCTTCAACTGC...TGAACCATCTGGTAGGACCTTATGAAGACCAAGAACATGGACAGCCATTGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235054.2 |
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| 3UTR CAA 72 bp | AAACTCCTTATGTTTATACAATGGCTGTCCATGTTCTaGGTCTTCATAAGGTCCTACCAGATGGTTCAATGG | + |
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Preference number: 4 (lower is better) Translates to: KLLMFIQWLSMF*VFIRSYQMVQW Trigger: CCATTGAACCATCTGGTAGGACCTTATGAAGACCAAGAACATGGACAGCCATTGTATAAACATAAGGAGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235054.2 |
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| CDS-3UTR GCA 90 bp | TCCTTGAGATTTCCTCTGGGCTCACTTATTATTATCAGGATACAATCCCCCAAAACTAGCATCCTTTTCTaGTCTACTATGAATTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: SLRFPLGSLIIIRIQSPKTSILF*STMNWY Trigger: GTACCAATTCATAGTAGAGCAGAAAAGGATGCTAGT...TTTGGGGGATTGTATCCTGATAATAATAAGTGAGCCCAGAGGAAATCTCAAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS-3UTR CCA 90 bp | CTCCCTCTTCTGGATTGTATGAGGACAGCTACAGTGTACTTACATATAATAAATGTGTTTTTAGGGAACTaGAATAAGGAAAGCCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: LPLLDCMRTATVYLHIINVFLGN*NKESPF Trigger: GAAAGGGCTTTCCTTATTCCAGTTCCCTAAAAACAC...ATTTATTATATGTAAGTACACTGTAGCTGTCCTCATACAATCCAGAAGAGGGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| 3UTR CAA 72 bp | TATGTGGTTTTTGACTCAAACTTTCTAAAACAGTCCTaGAGATTTCCTCTGGGCTCACTTATTATTATCAGG | + |
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Preference number: 4 (lower is better) Translates to: YVVFDSNFLKQS*RFPLGSLIIIR Trigger: CCTGATAATAATAAGTGAGCCCAGAGGAAATCTCAAGGACTGTTTTAGAAAGTTTGAGTCAAAAACCACATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS-3UTR CAA 90 bp | CTACCAGCTTGCTCTAAGGTAGTAAGTGGTTTTCAACCTTCCCAATGCGGTGACGAAAGCTTTCCCGCATaGCAAACACGCGTAGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: LPACSKVVSGFQPSQCGDESFPA*QTRVGL Trigger: AAGCCCTACGCGTGTTTGCAATGCGGGAAAGCTTTC...GTCACCGCATTGGGAAGGTTGAAAACCACTTACTACCTTAGAGCAAGCTGGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS-3UTR CAA 90 bp | CTGTCTCCCCACTCGTTTGGCTTGTGGTGTTTATCACAGCCATACTCACCCACTAACGAGGAAGAGTTCTaGCATAATGACCAGGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: LSPHSFGLWCLSQPYSPTNEEEF*HNDQAE Trigger: TTCTGCCTGGTCATTATGCAAGAACTCTTCCTCGTT...AGTGGGTGAGTATGGCTGTGATAAACACCACAAGCCAAACGAGTGGGGAGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS GCA 90 bp | AGATTGCAGGCTCACAGAGTGCCCTGGACTGCAGTTGAAGATGTCTaGACACTGATGATTTTCATTATAGTCACTGAATTTCCCCGCCAG | + |
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Preference number: 5 (lower is better) Translates to: RLQAHRVPWTAVEDV*TLMIFIIVTEFPRQ Trigger: CTGGCGGGGAAATTCAGTGACTATAATGAAAATCATCAGTGTGCAGACATCTTCAACTGCAGTCCAGGGCACTCTGTGAGCCTGCAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS-3UTR CAA 90 bp | GCGAGTCATACACAGGCCCTGCTGTCTAGTTTTCCTTTCGTGGGCTCCTGCACTAGCTACCTTGTGCTTTaGAAACTGATACCAAAATGT | + |
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Preference number: 5 (lower is better) Translates to: ASHTQALLSSFPFVGSCTSYLVL*KLIPKC Trigger: ACATTTTGGTATCAGTTTCAAAAGCACAAGGTAGCT...AGTGCAGGAGCCCACGAAAGGAAAACTAGACAGCAGGGCCTGTGTATGACTCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS-3UTR CAA 90 bp | CCAAGTCCACCGCCAAGTCTTACACCTCACACCTCTGAAAAGTTCACATCTACTTCAAAGCCCTTATTTTaGGAAGGTTTCTCTCCGGTG | + |
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Preference number: 5 (lower is better) Translates to: PSPPPSLTPHTSEKFTSTSKPLF*EGFSPV Trigger: CACCGGAGAGAAACCTTCCAAAAATAAGGGCTTTGA...AGTAGATGTGAACTTTTCAGAGGTGTGAGGTGTAAGACTTGGCGGTGGACTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS-3UTR CAA 90 bp | CAATGCTGTCTTCTGGCCTCATTGGGCACCAGGTACACATACACAGAACAGATAGCCTTCGTAAATGAGTaGAACTCAAAAAGCCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: QCCLLASLGTRYTYTEQIAFVNE*NSKSLS Trigger: GGAGAGGCTTTTTGAGTTCAACTCATTTACGAAGGC...TATCTGTTCTGTGTATGTGTACCTGGTGCCCAATGAGGCCAGAAGACAGCATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS-3UTR CAA 90 bp | TCCTTGAGATTTCCTCTGGGCTCACTTATTATTATCAGGATACAATCCCCCAAAGAAAGCTTTCCCGCATaGCAAACACGCGTAGGGCTT | + |
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Preference number: 5 (lower is better) Translates to: SLRFPLGSLIIIRIQSPKESFPA*QTRVGL Trigger: AAGCCCTACGCGTGTTTGCAATGCGGGAAAGCTTTC...TTTGGGGGATTGTATCCTGATAATAATAAGTGAGCCCAGAGGAAATCTCAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS TCA 90 bp | ATGCGTGAAGCCTTTCCCACATGGCCTGTGCACATAAGACTTCTTTaGATAGTCATTTTGTTTATACGTTTGGCCAGATCTGACACAAGG | + |
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Preference number: 5 (lower is better) Translates to: MREAFPTWPVHIRLL*IVILFIRLARSDTR Trigger: CCTTGTGTCAGATCTGGCCAAACGTATAAACAAAATGACTATTCAAAGAAGTCTTATGTGCACAGGCCATGTGGGAAAGGCTTCACGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS-3UTR CAA 90 bp | CACTTCCCCACATTGCTAGCAATAACCTACTTCATGCAGTTTGACTTAGTGAGATCAAAGCCCTTATTTTaGGAAGGTTTCTCTCCGGTG | + |
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Preference number: 5 (lower is better) Translates to: HFPTLLAITYFMQFDLVRSKPLF*EGFSPV Trigger: CACCGGAGAGAAACCTTCCAAAAATAAGGGCTTTGA...TCTCACTAAGTCAAACTGCATGAAGTAGGTTATTGCTAGCAATGTGGGGAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS-3UTR CAA 90 bp | CAAATTTGTCTGACACTTCCCCACATTGCTAGCAATAACCTACTTCATGCAGTTGCCTTCGTAAATGAGTaGAACTCAAAAAGCCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: QICLTLPHIASNNLLHAVAFVNE*NSKSLS Trigger: GGAGAGGCTTTTTGAGTTCAACTCATTTACGAAGGC...AACTGCATGAAGTAGGTTATTGCTAGCAATGTGGGGAAGTGTCAGACAAATTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS-3UTR CAA 90 bp | TCCTTGAGATTTCCTCTGGGCTCACTTATTATTATCAGGATACAATCCCCCAAAATTTTGTTTATACGTTaGGCCAGATCTGACACAAGG | + |
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Preference number: 5 (lower is better) Translates to: SLRFPLGSLIIIRIQSPKILFIR*ARSDTR Trigger: CCTTGTGTCAGATCTGGCCAAACGTATAAACAAAAT...TTTGGGGGATTGTATCCTGATAATAATAAGTGAGCCCAGAGGAAATCTCAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS-3UTR CAA 90 bp | CTCCCTCTTCTGGATTGTATGAGGACAGCTACAGTGTACTTACATATAATAAATATTTTGTTTATACGTTaGGCCAGATCTGACACAAGG | + |
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Preference number: 5 (lower is better) Translates to: LPLLDCMRTATVYLHIINILFIR*ARSDTR Trigger: CCTTGTGTCAGATCTGGCCAAACGTATAAACAAAAT...ATTTATTATATGTAAGTACACTGTAGCTGTCCTCATACAATCCAGAAGAGGGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS-3UTR CAA 90 bp | TATTTCTTTTTAATTGCGTTTACACGTGCAGGACTGTGTGTGGGTCTGAATTGTAGCTACCTTGTGCTTTaGAAACTGATACCAAAATGT | + |
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Preference number: 5 (lower is better) Translates to: YFFLIAFTRAGLCVGLNCSYLVL*KLIPKC Trigger: ACATTTTGGTATCAGTTTCAAAAGCACAAGGTAGCT...ACAATTCAGACCCACACACAGTCCTGCACGTGTAAACGCAATTAAAAAGAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS GCA 72 bp | AGATTCTTTTCAAATGTAGCACGTCCTGGACAAGATTaGAGGCTCACAGAGTGCCCTGGACTGCAGTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: RFFSNVARPGQD*RLTECPGLQLK Trigger: CTTCAACTGCAGTCCAGGGCACTCTGTGAGCCTGCAATCTTGTCCAGGACGTGCTACATTTGAAAAGAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS TCA 72 bp | AGATGTCTGCACACTGATGATTTTCATTATAGTCACTaGATTTCCCCGCCAGGTGGCTGCTATGGAAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: RCLHTDDFHYSH*ISPPGGCYGSQ Trigger: CTGGCTTCCATAGCAGCCACCTGGCGGGGAAATTCAGTGACTATAATGAAAATCATCAGTGTGCAGACATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235054.2 |
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| CDS CAA 72 bp | GTAAGGATTCACACCACTGTGAGCTACCTTGTGCTTTaGAAACTGATACCAAAATGTGAAGGCGCCCCCACA | + |
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Preference number: 6 (lower is better) Translates to: VRIHTTVSYLVL*KLIPKCEGAPT Trigger: TGTGGGGGCGCCTTCACATTTTGGTATCAGTTTCAAAAGCACAAGGTAGCTCACAGTGGTGTGAATCCTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS TCA 72 bp | GCATTATTTTATGTTTCCGAAGAGAGCTGTCTGAACTaGAAGCTTTCCCGCATTGCAAACACGCGTAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: ALFYVSEESCLN*KLSRIANTRRA Trigger: AGCCCTACGCGTGTTTGCAATGCGGGAAAGCTTTCAGTTCAGACAGCTCTCTTCGGAAACATAAAATAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS TCA 72 bp | AAGATTGCAGGCTCACAGAGTGCCCTGGACTGCAGTTaGAGATGTCTGCACACTGATGATTTTCATTATAGT | + |
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Preference number: 6 (lower is better) Translates to: KIAGSQSALDCS*RCLHTDDFHYS Trigger: ACTATAATGAAAATCATCAGTGTGCAGACATCTTCAACTGCAGTCCAGGGCACTCTGTGAGCCTGCAATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS TCA 72 bp | GCATTCGATTGTGGAACTGAAAGGAACTGTGATTGTTaGATGACTTCCCACACTGCTTGCAAATGTAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: AFDCGTERNCDC*MTSHTACKCRV Trigger: GACTCTACATTTGCAAGCAGTGTGGGAAGTCATTCAACAATCACAGTTCCTTTCAGTTCCACAATCGAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS GCA 72 bp | GCTCACAGAGTGCCCTGGACTGCAGTTGAAGATGTCTaGACACTGATGATTTTCATTATAGTCACTGAATTT | + |
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Preference number: 6 (lower is better) Translates to: AHRVPWTAVEDV*TLMIFIIVTEF Trigger: AAATTCAGTGACTATAATGAAAATCATCAGTGTGCAGACATCTTCAACTGCAGTCCAGGGCACTCTGTGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS GCA 72 bp | TCTTCTTCTAAGGCAAGCAGAACGAGGAAGAGTTCTTaGATAATGACCAGGCAGAAAAATCTTCTCACCTGT | + |
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Preference number: 6 (lower is better) Translates to: SSSKASRTRKSS*IMTRQKNLLTC Trigger: ACAGGTGAGAAGATTTTTCTGCCTGGTCATTATGCAAGAACTCTTCCTCGTTCTGCTTGCCTTAGAAGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS CAA 72 bp | TTTCCATACTCATTTATAACCTTCTGTTTGCCCGACTaGTTTCCTATGGAAGCCAGGTTCTTCAGGGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: FPYSFITFCLPD*FPMEARFFRVS Trigger: GGAAACCCTGAAGAACCTGGCTTCCATAGGAAACAAGTCGGGCAAACAGAAGGTTATAAATGAGTATGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS CAA 72 bp | CTCTACTATGAATTGGTACATGCCTTCGTAAATGAGTaGAACTCAAAAAGCCTCTCCCGCACGTCTCACATT | + |
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Preference number: 6 (lower is better) Translates to: LYYELVHAFVNE*NSKSLSRTSHI Trigger: AATGTGAGACGTGCGGGAGAGGCTTTTTGAGTTCAACTCATTTACGAAGGCATGTACCAATTCATAGTAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS CAA 72 bp | CTCCATAGTTTTCCATACTCATTTATAACCTTCTGTTaGCCCGACTTGTTTCCTATGGAAGCCAGGTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LHSFPYSFITFC*PDLFPMEARFF Trigger: GAAGAACCTGGCTTCCATAGGAAACAAGTCGGGCAAACAGAAGGTTATAAATGAGTATGGAAAACTATGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS CAA 90 bp | CTTAGTTTTCTCCATAGTTTTCCATACTCATTTATAACCTTCTGTTaGCCCGACTTGTTTCCTATGGAAGCCAGGTTCTTCAGGGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LSFLHSFPYSFITFC*PDLFPMEARFFRVS Trigger: GGAAACCCTGAAGAACCTGGCTTCCATAGGAAACAAGTCGGGCAAACAGAAGGTTATAAATGAGTATGGAAAACTATGGAGAAAACTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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| CDS TCA 72 bp | TTGAATAGTCATTTTGTTTATACGTTTGGCCAGATCTaGCACAAGGAAGGTCTTCCTCAAAGCCCTTATTTT | + |
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Preference number: 6 (lower is better) Translates to: LNSHFVYTFGQI*HKEGLPQSPYF Trigger: AAAATAAGGGCTTTGAGGAAGACCTTCCTTGTGTCAGATCTGGCCAAACGTATAAACAAAATGACTATTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000178401.2 ENSMUST00000228075.3 |
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