Pregenerated sensors for ZFP869 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000054648

Ensembl transcript IDs: ENSMUST00000080987.7, ENSMUST00000238201.2, ENSMUST00000238292.2, ENSMUST00000238408.2, ENSMUST00000238418.2, ENSMUST00000238460.2, ENSMUST00000238657.2, ENSMUST00000238753.2

Found 215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 90 bp	GGAGTGCCCCCACATGTGCTCTACCTCATCTTTCACAGAGGTGGCTaGAGTCCACAGGAGTTGCTCAGTAGGGATGATAAGGCCGGCAGT	+
Preference number: 1 (lower is better) Translates to: GVPPHVLYLIFHRGG*SPQELLSRDDKAGS Trigger: ACTGCCGGCCTTATCATCCCTACTGAGCAACTCCTGTGGACTGCAGCCACCTCTGTGAAAGATGAGGTAGAGCACATGTGGGGGCACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR GCA 90 bp	TGCTCTACCTCATCTTTCACAGAGGTGGCTGCAGTCCACAGGAGTTaGTCAGTAGGGATGATAAGGCCGGCAGTGCAGCAGAACCTTCAC	+
Preference number: 1 (lower is better) Translates to: CSTSSFTEVAAVHRS*SVGMIRPAVQQNLH Trigger: GTGAAGGTTCTGCTGCACTGCCGGCCTTATCATCCCTACTGAGCAACTCCTGTGGACTGCAGCCACCTCTGTGAAAGATGAGGTAGAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR GCA 90 bp	GTGCCTGCTAGCCAACACTCAGCCTCAGTTTCATGTCTCATTGCCTaGAACAAGGAGCATGCACCTTGTGGCATAGTCTGTCCCACACAT	+
Preference number: 1 (lower is better) Translates to: VPASQHSASVSCLIA*NKEHAPCGIVCPTH Trigger: ATGTGTGGGACAGACTATGCCACAAGGTGCATGCTCCTTGTTGCAGGCAATGAGACATGAAACTGAGGCTGAGTGTTGGCTAGCAGGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR CCA 90 bp	CAGTTGTTCCACATATTGAGTCAGGGCACTCTAGCCATGGCTTCCTaGGAAGCACAGGGAACATGCTCCTGTGTTGACTCGCTTCTACAG	+
Preference number: 1 (lower is better) Translates to: QLFHILSQGTLAMAS*EAQGTCSCVDSLLQ Trigger: CTGTAGAAGCGAGTCAACACAGGAGCATGTTCCCTGTGCTTCCCAGGAAGCCATGGCTAGAGTGCCCTGACTCAATATGTGGAACAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR GCA 90 bp	ACACTCAGCCTCAGTTTCATGTCTCATTGCCTGCAACAAGGAGCATaGACCTTGTGGCATAGTCTGTCCCACACATGCATCTTTCAGGGA	+
Preference number: 1 (lower is better) Translates to: TLSLSFMSHCLQQGA*TLWHSLSHTCIFQG Trigger: TCCCTGAAAGATGCATGTGTGGGACAGACTATGCCACAAGGTGCATGCTCCTTGTTGCAGGCAATGAGACATGAAACTGAGGCTGAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR CCA 90 bp	CACAGGGAACATGCTCCTGTGTTGACTCGCTTCTACAGCGTAAGCTaGCAATTCCCTCATGGGACTTCCAGAGCCTCTAAATACAAGAGA	+
Preference number: 1 (lower is better) Translates to: HREHAPVLTRFYSVS*QFPHGTSRASKYKR Trigger: TCTCTTGTATTTAGAGGCTCTGGAAGTCCCATGAGGGAATTGCCAGCTTACGCTGTAGAAGCGAGTCAACACAGGAGCATGTTCCCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR TCA 90 bp	GAGACTCCTTTCCCAGGTGACACCAGATTGTGTCAAGTTGACAGCTaGAGCACCCATCCAAAACAGAAAGAAGCACAGCACATTAGGGCA	+
Preference number: 1 (lower is better) Translates to: ETPFPGDTRLCQVDS*STHPKQKEAQHIRA Trigger: TGCCCTAATGTGCTGTGCTTCTTTCTGTTTTGGATGGGTGCTTCAGCTGTCAACTTGACACAATCTGGTGTCACCTGGGAAAGGAGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR TCA 90 bp	CTTCACTTTGGAAAAGACCCGCAAAGGGCTTACTGCCATGGATGCTaGACCTTCAAAAAGAGCCCTTCAGTGACTTGTCACCACCACTCA	+
Preference number: 1 (lower is better) Translates to: LHFGKDPQRAYCHGC*TFKKSPSVTCHHHS Trigger: TGAGTGGTGGTGACAAGTCACTGAAGGGCTCTTTTTGAAGGTTCAGCATCCATGGCAGTAAGCCCTTTGCGGGTCTTTTCCAAAGTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR GCA 90 bp	AGAACCTGCATGTATCTCCTTACAACTGCTACACATGTGGGTAAGTaGCTGCTAGCCAACACTCAGCCTCAGTTTCATGTCTCATTGCCT	+
Preference number: 1 (lower is better) Translates to: RTCMYLLTTATHVGK*LLANTQPQFHVSLP Trigger: AGGCAATGAGACATGAAACTGAGGCTGAGTGTTGGCTAGCAGGCACTTACCCACATGTGTAGCAGTTGTAAGGAGATACATGCAGGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR GCA 90 bp	TTCTGTACCTTTCCTGCCAATGTGAGGCTAACACAGCAGAGAACCTaGATGTATCTCCTTACAACTGCTACACATGTGGGTAAGTGCCTG	+
Preference number: 1 (lower is better) Translates to: FCTFPANVRLTQQRT*MYLLTTATHVGKCL Trigger: CAGGCACTTACCCACATGTGTAGCAGTTGTAAGGAGATACATGCAGGTTCTCTGCTGTGTTAGCCTCACATTGGCAGGAAAGGTACAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR CCA 90 bp	GACTTTGAGAGATGCCCCCACAGCCTCCTGGAACCTAGCTGGCTTTaGAAGATAAAGATCAAATTACTGTCCATCCCATTTACATCCTCT	+
Preference number: 1 (lower is better) Translates to: DFERCPHSLLEPSWL*KIKIKLLSIPFTSS Trigger: AGAGGATGTAAATGGGATGGACAGTAATTTGATCTTTATCTTCCAAAGCCAGCTAGGTTCCAGGAGGCTGTGGGGGCATCTCTCAAAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR GCA 90 bp	TCAGTGACTTGTCACCACCACTCATGTCAGAAACAAGGCAAGTGCTaGTATCAAACAACTTATCTTTGGTTCTGCTGTGTGCAGATCCAG	+
Preference number: 1 (lower is better) Translates to: SVTCHHHSCQKQGKC*YQTTYLWFCCVQIQ Trigger: CTGGATCTGCACACAGCAGAACCAAAGATAAGTTGTTTGATAGCAGCACTTGCCTTGTTTCTGACATGAGTGGTGGTGACAAGTCACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR GCA 90 bp	CCTTCAGTGACTTGTCACCACCACTCATGTCAGAAACAAGGCAAGTaGTGCTATCAAACAACTTATCTTTGGTTCTGCTGTGTGCAGATC	+
Preference number: 1 (lower is better) Translates to: PSVTCHHHSCQKQGK*CYQTTYLWFCCVQI Trigger: GATCTGCACACAGCAGAACCAAAGATAAGTTGTTTGATAGCAGCACTTGCCTTGTTTCTGACATGAGTGGTGGTGACAAGTCACTGAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR TCA 90 bp	GCTCAGCTACTTCTGTCCTTTTTAATTCAGTCCATAAAACAGCACTaGCAGCATTCAGGATGGGTCTTCCTACCTCAAATCATCCTAGTA	+
Preference number: 1 (lower is better) Translates to: AQLLLSFLIQSIKQH*QHSGWVFLPQIILV Trigger: TACTAGGATGATTTGAGGTAGGAAGACCCATCCTGAATGCTGTCAGTGCTGTTTTATGGACTGAATTAAAAAGGACAGAAGTAGCTGAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR CCA 90 bp	ACCATGAAGGCTTCACAGCTGTTTCCATTTGGAAATTTTTCCAGTTaGAATTCATTCTCGGAATCTAGGCAAACAATGCTATCTCAAGGT	+
Preference number: 1 (lower is better) Translates to: TMKASQLFPFGNFSS*NSFSESRQTMLSQG Trigger: ACCTTGAGATAGCATTGTTTGCCTAGATTCCGAGAATGAATTCCAACTGGAAAAATTTCCAAATGGAAACAGCTGTGAAGCCTTCATGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR GCA 90 bp	GAAATTTTTCCAGTTGGAATTCATTCTCGGAATCTAGGCAAACAATaGTATCTCAAGGTCTTAACACACCTTACATTCCCATTTTCTCTC	+
Preference number: 1 (lower is better) Translates to: EIFPVGIHSRNLGKQ*YLKVLTHLTFPFSL Trigger: GAGAGAAAATGGGAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTGCCTAGATTCCGAGAATGAATTCCAACTGGAAAAATTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR TCA 90 bp	CAAAACAGAAAGAAGCACAGCACATTAGGGCACAGCCTTCACCCCTGCTGGATGGGACACTGTGACCCCTaGAGGCTACCCACACTGTTT	+
Preference number: 2 (lower is better) Translates to: QNRKKHSTLGHSLHPCWMGHCDP*RLPTLF Trigger: AAACAGTGTGGGTAGCCTTCAGGGGTCACAGTGTCC...CATCCAGCAGGGGTGAAGGCTGTGCCCTAATGTGCTGTGCTTCTTTCTGTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR TCA 90 bp	GCTGAAGCACCCATCCAAAACAGAAAGAAGCACAGCACATTAGGGCACAGCCTTCAGTGTGGCCTCCTCTaGGCTCCTTGTAGTCATAGT	+
Preference number: 2 (lower is better) Translates to: AEAPIQNRKKHSTLGHSLQCGLL*APCSHS Trigger: ACTATGACTACAAGGAGCTCAGAGGAGGCCACACTG...AAGGCTGTGCCCTAATGTGCTGTGCTTCTTTCTGTTTTGGATGGGTGCTTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238201.2
3UTR-3UTR TCA 90 bp	CCAGATTGTGTCAAGTTGACAGCTGAAGCACCCATCCAAAACAGAAAGAAGCACGGACACTGTGACCCCTaGAGGCTACCCACACTGTTT	+
Preference number: 2 (lower is better) Translates to: PDCVKLTAEAPIQNRKKHGHCDP*RLPTLF Trigger: AAACAGTGTGGGTAGCCTTCAGGGGTCACAGTGTCC...GTGCTTCTTTCTGTTTTGGATGGGTGCTTCAGCTGTCAACTTGACACAATCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR TCA 90 bp	CACTCACAGAACTGCCCACCTTCCAACACTATGAGCATCTTAAACAACTGTGACAGGAACTGTGCCTGCTaGAGGATCTGCCACACTGTC	+
Preference number: 2 (lower is better) Translates to: HSQNCPPSNTMSILNNCDRNCAC*RICHTV Trigger: GACAGTGTGGCAGATCCTTCAGCAGGCACAGTTCCT...GTCACAGTTGTTTAAGATGCTCATAGTGTTGGAAGGTGGGCAGTTCTGTGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238201.2
3UTR-3UTR GCA 90 bp	CAGGTGACACCAGATTGTGTCAAGTTGACAGCTGAAGCACCCATCCAAAACAGACACAGCCTTCACCCCTaGTGGATGTTTCAGACGGAT	+
Preference number: 2 (lower is better) Translates to: QVTPDCVKLTAEAPIQNRHSLHP*WMFQTD Trigger: ATCCGTCTGAAACATCCAGCAGGGGTGAAGGCTGTG...TCTGTTTTGGATGGGTGCTTCAGCTGTCAACTTGACACAATCTGGTGTCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR CCA 90 bp	GCTGAAGCACCCATCCAAAACAGAAAGAAGCACAGCACATTAGGGCACAGCCTTCATCTTTCACAGAGGTaGCTGCAGTCCACAGGAGTT	+
Preference number: 2 (lower is better) Translates to: AEAPIQNRKKHSTLGHSLHLSQR*LQSTGV Trigger: AACTCCTGTGGACTGCAGCCACCTCTGTGAAAGATG...AAGGCTGTGCCCTAATGTGCTGTGCTTCTTTCTGTTTTGGATGGGTGCTTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR-3UTR TCA 90 bp	CACTCACAGAACTGCCCACCTTCCAACACTATGAGCATCTTAAACAACTGTGACAGTCGAAGCGAGGACTaGCACCTAAAGGCTTTACCG	+
Preference number: 2 (lower is better) Translates to: HSQNCPPSNTMSILNNCDSRSED*HLKALP Trigger: CGGTAAAGCCTTTAGGTGTCAGTCCTCGCTTCGACT...GTCACAGTTGTTTAAGATGCTCATAGTGTTGGAAGGTGGGCAGTTCTGTGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238201.2
3UTR-3UTR GCA 90 bp	CAGAAAGAAGCACAGCACATTAGGGCACAGCCTTCACCCCTGCTGGATGTTTCATTACACTCACAGAACTaGCCACCTTCCAACACTATG	+
Preference number: 2 (lower is better) Translates to: QKEAQHIRAQPSPLLDVSLHSQN*PPSNTM Trigger: CATAGTGTTGGAAGGTGGGCAGTTCTGTGAGTGTAA...TGAAACATCCAGCAGGGGTGAAGGCTGTGCCCTAATGTGCTGTGCTTCTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR GCA 90 bp	CCAGATTGTGTCAAGTTGACAGCTGAAGCACCCATCCAAAACAGAAAGAAGCACTTTCACAGAGGTGGCTaGAGTCCACAGGAGTTGCTC	+
Preference number: 2 (lower is better) Translates to: PDCVKLTAEAPIQNRKKHFHRGG*SPQELL Trigger: GAGCAACTCCTGTGGACTGCAGCCACCTCTGTGAAA...GTGCTTCTTTCTGTTTTGGATGGGTGCTTCAGCTGTCAACTTGACACAATCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR-3UTR TCA 90 bp	AACACTATGAGCATCTTAAACAACTGTGACCATGAAGGCTTCACAGCTGTTTCCGGACACTGTGACCCCTaGAGGCTACCCACACTGTTT	+
Preference number: 2 (lower is better) Translates to: NTMSILNNCDHEGFTAVSGHCDP*RLPTLF Trigger: AAACAGTGTGGGTAGCCTTCAGGGGTCACAGTGTCC...GGAAACAGCTGTGAAGCCTTCATGGTCACAGTTGTTTAAGATGCTCATAGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR TCA 90 bp	AAAAAGAGCCCTTCAGTGACTTGTCACCACCACTCATGTCAGAAACAAGGCAAGCAGATTGTGTCAAGTTaGCAGCTGAAGCACCCATCC	+
Preference number: 2 (lower is better) Translates to: KKSPSVTCHHHSCQKQGKQIVSS*QLKHPS Trigger: GGATGGGTGCTTCAGCTGTCAACTTGACACAATCTG...CTTGCCTTGTTTCTGACATGAGTGGTGGTGACAAGTCACTGAAGGGCTCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR-3UTR GCA 90 bp	TTAGGGCACAGCCTTCACCCCTGCTGGATGTTTCAGACGGATGTAAACACAACTTTACACTCACAGAACTaGCCACCTTCCAACACTATG	+
Preference number: 2 (lower is better) Translates to: LGHSLHPCWMFQTDVNTTLHSQN*PPSNTM Trigger: CATAGTGTTGGAAGGTGGGCAGTTCTGTGAGTGTAA...AGTTGTGTTTACATCCGTCTGAAACATCCAGCAGGGGTGAAGGCTGTGCCCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR GCA 90 bp	TGTGTCAAGTTGACAGCTGAAGCACCCATCCAAAACAGAAAGAAGCACAGCACAGAGTGCCCCCACATGTaGTCTACCTCATCTTTCACA	+
Preference number: 2 (lower is better) Translates to: CVKLTAEAPIQNRKKHSTECPHM*STSSFT Trigger: TGTGAAAGATGAGGTAGAGCACATGTGGGGGCACTC...TGTGCTGTGCTTCTTTCTGTTTTGGATGGGTGCTTCAGCTGTCAACTTGACACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR CAA 90 bp	TTACTGCCATGGATGCTGAACCTTCAAAAAGAGCCCTTCAGTGACTaGTCACCACCACTCATGTCAGAAACAAGGCAAGTGCTGCTATCA	+
Preference number: 2 (lower is better) Translates to: LLPWMLNLQKEPFSD*SPPLMSETRQVLLS Trigger: TGATAGCAGCACTTGCCTTGTTTCTGACATGAGTGGTGGTGACAAGTCACTGAAGGGCTCTTTTTGAAGGTTCAGCATCCATGGCAGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR-3UTR TCA 90 bp	TGTGTCAAGTTGACAGCTGAAGCACCCATCCAAAACAGAAAGAAGCACAGCACAAAAAGAGCCCTTCAGTaGCTTGTCACCACCACTCAT	+
Preference number: 2 (lower is better) Translates to: CVKLTAEAPIQNRKKHSTKRALQ*LVTTTH Trigger: ATGAGTGGTGGTGACAAGTCACTGAAGGGCTCTTTT...TGTGCTGTGCTTCTTTCTGTTTTGGATGGGTGCTTCAGCTGTCAACTTGACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR-3UTR TCA 90 bp	CAGAAAGAAGCACAGCACATTAGGGCACAGCCTTCACCCCTGCTGGATGTTTCAACAACTTTAAAACCCTaGAGACATTTACGAAGGTCT	+
Preference number: 2 (lower is better) Translates to: QKEAQHIRAQPSPLLDVSTTLKP*RHLRRS Trigger: AGACCTTCGTAAATGTCTTCAGGGTTTTAAAGTTGT...TGAAACATCCAGCAGGGGTGAAGGCTGTGCCCTAATGTGCTGTGCTTCTTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR TCA 90 bp	CGCTCAGCTACTTCTGTCCTTTTTAATTCAGTCCATAAAACAGCACTGACAGCACAGATTGTGTCAAGTTaGCAGCTGAAGCACCCATCC	+
Preference number: 2 (lower is better) Translates to: RSATSVLFNSVHKTALTAQIVSS*QLKHPS Trigger: GGATGGGTGCTTCAGCTGTCAACTTGACACAATCTG...TGCTGTCAGTGCTGTTTTATGGACTGAATTAAAAAGGACAGAAGTAGCTGAGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR TCA 90 bp	TTTAATTCAGTCCATAAAACAGCACTGACAGCATTCAGGATGGGTCTTCCTACCGACTCCTTTCCCAGGTaGCACCAGATTGTGTCAAGT	+
Preference number: 2 (lower is better) Translates to: FNSVHKTALTAFRMGLPTDSFPR*HQIVSS Trigger: ACTTGACACAATCTGGTGTCACCTGGGAAAGGAGTC...GGTAGGAAGACCCATCCTGAATGCTGTCAGTGCTGTTTTATGGACTGAATTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR TCA 90 bp	AAGGAAATGGGGATAATGGAATTAGATACTGTTCATATGGGCTTTCTCCATGAAGGACACTGTGACCCCTaGAGGCTACCCACACTGTTT	+
Preference number: 2 (lower is better) Translates to: KEMGIMELDTVHMGFLHEGHCDP*RLPTLF Trigger: AAACAGTGTGGGTAGCCTTCAGGGGTCACAGTGTCC...TTCATGGAGAAAGCCCATATGAACAGTATCTAATTCCATTATCCCCATTTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238201.2
3UTR-3UTR TCA 90 bp	GCTGAAGCACCCATCCAAAACAGAAAGAAGCACAGCACATTAGGGCACAGCCTTATTTTCTCTCCAACATaGCATTTCATCCATGCTAGT	+
Preference number: 2 (lower is better) Translates to: AEAPIQNRKKHSTLGHSLIFSPT*HFIHAS Trigger: ACTAGCATGGATGAAATGTCATGTTGGAGAGAAAAT...AAGGCTGTGCCCTAATGTGCTGTGCTTCTTTCTGTTTTGGATGGGTGCTTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR TCA 90 bp	GCTAGCCAACACTCAGCCTCAGTTTCATGTCTCATTGCCTGCAACAAGGAGCATATTTTCTCTCCAACATaGCATTTCATCCATGCTAGT	+
Preference number: 2 (lower is better) Translates to: ASQHSASVSCLIACNKEHIFSPT*HFIHAS Trigger: ACTAGCATGGATGAAATGTCATGTTGGAGAGAAAAT...ATGCTCCTTGTTGCAGGCAATGAGACATGAAACTGAGGCTGAGTGTTGGCTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR-3UTR TCA 90 bp	TTAGGGCACAGCCTTCACCCCTGCTGGATGTTTCAGACGGATGTAAACACAACTATTTTCTCTCCAACATaGCATTTCATCCATGCTAGT	+
Preference number: 2 (lower is better) Translates to: LGHSLHPCWMFQTDVNTTIFSPT*HFIHAS Trigger: ACTAGCATGGATGAAATGTCATGTTGGAGAGAAAAT...AGTTGTGTTTACATCCGTCTGAAACATCCAGCAGGGGTGAAGGCTGTGCCCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR TCA 90 bp	GCTGAAGCACCCATCCAAAACAGAAAGAAGCACAGCACATTAGGGCACAGCCTTACAACTTTAAAACCCTaGAGACATTTACGAAGGTCT	+
Preference number: 2 (lower is better) Translates to: AEAPIQNRKKHSTLGHSLTTLKP*RHLRRS Trigger: AGACCTTCGTAAATGTCTTCAGGGTTTTAAAGTTGT...AAGGCTGTGCCCTAATGTGCTGTGCTTCTTTCTGTTTTGGATGGGTGCTTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR TCA 90 bp	CACCACTCATGTCAGAAACAAGGCAAGTGCTGCTATCAAACAACTTATCTTTGGTCCATAAAACAGCACTaGCAGCATTCAGGATGGGTC	+
Preference number: 2 (lower is better) Translates to: HHSCQKQGKCCYQTTYLWSIKQH*QHSGWV Trigger: GACCCATCCTGAATGCTGTCAGTGCTGTTTTATGGA...CCAAAGATAAGTTGTTTGATAGCAGCACTTGCCTTGTTTCTGACATGAGTGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR-3UTR GCA 90 bp	GAGGAACCGTGGAGTTTAATTTGGGGTATTTACAAGAGTACAGGCAAGTCATGGCTTGTCGTGAGTTTCTaGCTGTTTTATGTGGATGGG	+
Preference number: 2 (lower is better) Translates to: EEPWSLIWGIYKSTGKSWLVVSF*LFYVDG Trigger: CCCATCCACATAAAACAGGCAGAAACTCACGACAAG...CCATGACTTGCCTGTACTCTTGTAAATACCCCAAATTAAACTCCACGGTTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR CCA 90 bp	CAAAACAGAAAGAAGCACAGCACATTAGGGCACAGCCTTCACCCCTGCTGGATGGAAGTTTTCTCACACTaGTTACCTTCAGAATCATTT	+
Preference number: 2 (lower is better) Translates to: QNRKKHSTLGHSLHPCWMEVFSH*LPSESF Trigger: AAATGATTCTGAAGGTAACCAGTGTGAGAAAACTTC...CATCCAGCAGGGGTGAAGGCTGTGCCCTAATGTGCTGTGCTTCTTTCTGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238201.2
3UTR CAA 90 bp	AACATTGGTAACAAACATAAACTTTGCCCAGCAAGAATTCCTTCTTaGAAGGACACTGTGACCCCTGAAGGCTACCCACACTGTTTACAG	+
Preference number: 2 (lower is better) Translates to: NIGNKHKLCPARIPS*KDTVTPEGYPHCLQ Trigger: CTGTAAACAGTGTGGGTAGCCTTCAGGGGTCACAGTGTCCTTCAAAGAAGGAATTCTTGCTGGGCAAAGTTTATGTTTGTTACCAATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR CAA 90 bp	CTCATGTCAGAAACAAGGCAAGTGCTGCTATCAAACAACTTATCTTaGGTTCTGCTGTGTGCAGATCCAGGCAGTCTTAGTTTCATTCCT	+
Preference number: 2 (lower is better) Translates to: LMSETRQVLLSNNLS*VLLCADPGSLSFIP Trigger: AGGAATGAAACTAAGACTGCCTGGATCTGCACACAGCAGAACCAAAGATAAGTTGTTTGATAGCAGCACTTGCCTTGTTTCTGACATGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR-3UTR TCA 90 bp	AGCCTGGAAAGCTGTACTCATGGGTTTTACATCAAGTGTTTAACTTTATTCTTTGGACACTGTGACCCCTaGAGGCTACCCACACTGTTT	+
Preference number: 2 (lower is better) Translates to: SLESCTHGFYIKCLTLFFGHCDP*RLPTLF Trigger: AAACAGTGTGGGTAGCCTTCAGGGGTCACAGTGTCC...AAAGAATAAAGTTAAACACTTGATGTAAAACCCATGAGTACAGCTTTCCAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR-3UTR TCA 90 bp	TGTGTCAAGTTGACAGCTGAAGCACCCATCCAAAACAGAAAGAAGCACAGCACAAACTTAAGGGTCCTGTaGCTTCTGAAAAATTTCCCA	+
Preference number: 2 (lower is better) Translates to: CVKLTAEAPIQNRKKHSTNLRVL*LLKNFP Trigger: TGGGAAATTTTTCAGAAGTCACAGGACCCTTAAGTT...TGTGCTGTGCTTCTTTCTGTTTTGGATGGGTGCTTCAGCTGTCAACTTGACACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238201.2
3UTR-3UTR GCA 90 bp	AACACTATGAGCATCTTAAACAACTGTGACCATGAAGGCTTCACAGCTGTTTCCCTTGTCGTGAGTTTCTaGCTGTTTTATGTGGATGGG	+
Preference number: 2 (lower is better) Translates to: NTMSILNNCDHEGFTAVSLVVSF*LFYVDG Trigger: CCCATCCACATAAAACAGGCAGAAACTCACGACAAG...GGAAACAGCTGTGAAGCCTTCATGGTCACAGTTGTTTAAGATGCTCATAGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR GCA 90 bp	GACAGCAAGGAATCTTTGCGCTCAGCTACTTCTGTCCTTTTTAATTCAGTCCATTTACACTCACAGAACTaGCCACCTTCCAACACTATG	+
Preference number: 2 (lower is better) Translates to: DSKESLRSATSVLFNSVHLHSQN*PPSNTM Trigger: CATAGTGTTGGAAGGTGGGCAGTTCTGTGAGTGTAA...ATGGACTGAATTAAAAAGGACAGAAGTAGCTGAGCGCAAAGATTCCTTGCTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR CCA 90 bp	TTAGGGCACAGCCTTCACCCCTGCTGGATGTTTCAGACGGATGTAAACACAACTCCTGTTTTATGTGGATaGGATAATTTGCTACATTGT	+
Preference number: 2 (lower is better) Translates to: LGHSLHPCWMFQTDVNTTPVLCG*DNLLHC Trigger: ACAATGTAGCAAATTATCCCATCCACATAAAACAGG...AGTTGTGTTTACATCCGTCTGAAACATCCAGCAGGGGTGAAGGCTGTGCCCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR TCA 90 bp	AATCTAGGCAAACAATGCTATCTCAAGGTCTTAACACACCTTACATTCCCATTTGACTCCTTTCCCAGGTaGCACCAGATTGTGTCAAGT	+
Preference number: 2 (lower is better) Translates to: NLGKQCYLKVLTHLTFPFDSFPR*HQIVSS Trigger: ACTTGACACAATCTGGTGTCACCTGGGAAAGGAGTC...AAATGGGAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTGCCTAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR GCA 90 bp	TCTCGGAATCTAGGCAAACAATGCTATCTCAAGGTCTTAACACACCTTACATTCCTTGTCGTGAGTTTCTaGCTGTTTTATGTGGATGGG	+
Preference number: 2 (lower is better) Translates to: SRNLGKQCYLKVLTHLTFLVVSF*LFYVDG Trigger: CCCATCCACATAAAACAGGCAGAAACTCACGACAAG...GAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTGCCTAGATTCCGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR GCA 90 bp	AACAACTGTGACCATGAAGGCTTCACAGCTGTTTCCATTTGGAAATTTTTCCAGCTTGTCGTGAGTTTCTaGCTGTTTTATGTGGATGGG	+
Preference number: 2 (lower is better) Translates to: NNCDHEGFTAVSIWKFFQLVVSF*LFYVDG Trigger: CCCATCCACATAAAACAGGCAGAAACTCACGACAAG...CTGGAAAAATTTCCAAATGGAAACAGCTGTGAAGCCTTCATGGTCACAGTTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR GCA 90 bp	CAGGTGACACCAGATTGTGTCAAGTTGACAGCTGAAGCACCCATCCAAAACAGAAACAAACATAAACTTTaGCCAGCAAGAATTCCTTCT	+
Preference number: 2 (lower is better) Translates to: QVTPDCVKLTAEAPIQNRNKHKL*PARIPS Trigger: AGAAGGAATTCTTGCTGGGCAAAGTTTATGTTTGTT...TCTGTTTTGGATGGGTGCTTCAGCTGTCAACTTGACACAATCTGGTGTCACCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR TCA 90 bp	GAGGAACCGTGGAGTTTAATTTGGGGTATTTACAAGAGTACAGGCAAGTCATGGATTTTCTCTCCAACATaGCATTTCATCCATGCTAGT	+
Preference number: 2 (lower is better) Translates to: EEPWSLIWGIYKSTGKSWIFSPT*HFIHAS Trigger: ACTAGCATGGATGAAATGTCATGTTGGAGAGAAAAT...CCATGACTTGCCTGTACTCTTGTAAATACCCCAAATTAAACTCCACGGTTCCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR GCA 90 bp	AATCTAGGCAAACAATGCTATCTCAAGGTCTTAACACACCTTACATTCCCATTTACAGCAAGGAATCTTTaGGCTCAGCTACTTCTGTCC	+
Preference number: 2 (lower is better) Translates to: NLGKQCYLKVLTHLTFPFTARNL*AQLLLS Trigger: GGACAGAAGTAGCTGAGCGCAAAGATTCCTTGCTGT...AAATGGGAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTGCCTAGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR CCA 90 bp	CCAGATTGTGTCAAGTTGACAGCTGAAGCACCCATCCAAAACAGAAAGAAGCACTTGTTTATATTCATGTaGGGCTTTTTCACCACTATG	+
Preference number: 2 (lower is better) Translates to: PDCVKLTAEAPIQNRKKHLFIFM*GFFTTM Trigger: CATAGTGGTGAAAAAGCCCCACATGAATATAAACAA...GTGCTTCTTTCTGTTTTGGATGGGTGCTTCAGCTGTCAACTTGACACAATCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR CAA 90 bp	TTAGGATCTCAGGAAAGGCTTAACACAGACTTAATCTGTAATTGCTaGTCCTTCCAGAAGCCATCTTTTTCACCTCCTTTTTCTGTACCT	+
Preference number: 2 (lower is better) Translates to: LGSQERLNTDLICNC*SFQKPSFSPPFSVP Trigger: AGGTACAGAAAAAGGAGGTGAAAAAGATGGCTTCTGGAAGGACAAGCAATTACAGATTAAGTCTGTGTTAAGCCTTTCCTGAGATCCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR-3UTR TCA 90 bp	AACACTATGAGCATCTTAAACAACTGTGACCATGAAGGCTTCACAGCTGTTTCCATTTTCTCTCCAACATaGCATTTCATCCATGCTAGT	+
Preference number: 2 (lower is better) Translates to: NTMSILNNCDHEGFTAVSIFSPT*HFIHAS Trigger: ACTAGCATGGATGAAATGTCATGTTGGAGAGAAAAT...GGAAACAGCTGTGAAGCCTTCATGGTCACAGTTGTTTAAGATGCTCATAGTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR TCA 90 bp	GACAGCAAGGAATCTTTGCGCTCAGCTACTTCTGTCCTTTTTAATTCAGTCCATACAACTTTAAAACCCTaGAGACATTTACGAAGGTCT	+
Preference number: 2 (lower is better) Translates to: DSKESLRSATSVLFNSVHTTLKP*RHLRRS Trigger: AGACCTTCGTAAATGTCTTCAGGGTTTTAAAGTTGT...ATGGACTGAATTAAAAAGGACAGAAGTAGCTGAGCGCAAAGATTCCTTGCTGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR TCA 90 bp	TTGCGCTCAGCTACTTCTGTCCTTTTTAATTCAGTCCATAAAACAGCACTGACAACAACTTTAAAACCCTaGAGACATTTACGAAGGTCT	+
Preference number: 2 (lower is better) Translates to: LRSATSVLFNSVHKTALTTTLKP*RHLRRS Trigger: AGACCTTCGTAAATGTCTTCAGGGTTTTAAAGTTGT...TGTCAGTGCTGTTTTATGGACTGAATTAAAAAGGACAGAAGTAGCTGAGCGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR TCA 90 bp	CACCTTACATTCCCATTTTCTCTCCAACATGACATTTCATCCATGCTAGTGAAAATTTTGTCTTCTTTCTaGAGGGAACCGGAAGTTTTC	+
Preference number: 2 (lower is better) Translates to: HLTFPFSLQHDISSMLVKILSSF*REPEVF Trigger: GAAAACTTCCGGTTCCCTTCAGAAAGAAGACAAAAT...TTTCACTAGCATGGATGAAATGTCATGTTGGAGAGAAAATGGGAATGTAAGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000238201.2
3UTR-3UTR GCA 90 bp	TTGGAAATTTTTCCAGTTGGAATTCATTCTCGGAATCTAGGCAAACAATGCTATCTTGTCGTGAGTTTCTaGCTGTTTTATGTGGATGGG	+
Preference number: 2 (lower is better) Translates to: LEIFPVGIHSRNLGKQCYLVVSF*LFYVDG Trigger: CCCATCCACATAAAACAGGCAGAAACTCACGACAAG...ATAGCATTGTTTGCCTAGATTCCGAGAATGAATTCCAACTGGAAAAATTTCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR GCA 90 bp	TTTAATTCAGTCCATAAAACAGCACTGACAGCATTCAGGATGGGTCTTCCTACCAACAAACATAAACTTTaGCCAGCAAGAATTCCTTCT	+
Preference number: 2 (lower is better) Translates to: FNSVHKTALTAFRMGLPTNKHKL*PARIPS Trigger: AGAAGGAATTCTTGCTGGGCAAAGTTTATGTTTGTT...GGTAGGAAGACCCATCCTGAATGCTGTCAGTGCTGTTTTATGGACTGAATTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR CCA 90 bp	TTTAATTCAGTCCATAAAACAGCACTGACAGCATTCAGGATGGGTCTTCCTACCCCTGTTTTATGTGGATaGGATAATTTGCTACATTGT	+
Preference number: 2 (lower is better) Translates to: FNSVHKTALTAFRMGLPTPVLCG*DNLLHC Trigger: ACAATGTAGCAAATTATCCCATCCACATAAAACAGG...GGTAGGAAGACCCATCCTGAATGCTGTCAGTGCTGTTTTATGGACTGAATTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR CCA 90 bp	TTTAATTCAGTCCATAAAACAGCACTGACAGCATTCAGGATGGGTCTTCCTACCTTGTTTATATTCATGTaGGGCTTTTTCACCACTATG	+
Preference number: 2 (lower is better) Translates to: FNSVHKTALTAFRMGLPTLFIFM*GFFTTM Trigger: CATAGTGGTGAAAAAGCCCCACATGAATATAAACAA...GGTAGGAAGACCCATCCTGAATGCTGTCAGTGCTGTTTTATGGACTGAATTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR GCA 90 bp	TCTCGGAATCTAGGCAAACAATGCTATCTCAAGGTCTTAACACACCTTACATTCAACAAACATAAACTTTaGCCAGCAAGAATTCCTTCT	+
Preference number: 2 (lower is better) Translates to: SRNLGKQCYLKVLTHLTFNKHKL*PARIPS Trigger: AGAAGGAATTCTTGCTGGGCAAAGTTTATGTTTGTT...GAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTGCCTAGATTCCGAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR GCA 90 bp	ACAACTGTGACCATGAAGGCTTCACAGCTGTTTCCATTTGGAAATTTTTCCAGTAACAAACATAAACTTTaGCCAGCAAGAATTCCTTCT	+
Preference number: 2 (lower is better) Translates to: TTVTMKASQLFPFGNFSSNKHKL*PARIPS Trigger: AGAAGGAATTCTTGCTGGGCAAAGTTTATGTTTGTT...ACTGGAAAAATTTCCAAATGGAAACAGCTGTGAAGCCTTCATGGTCACAGTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR CCA 90 bp	TTGCGCTCAGCTACTTCTGTCCTTTTTAATTCAGTCCATAAAACAGCACTGACATTGTTTATATTCATGTaGGGCTTTTTCACCACTATG	+
Preference number: 2 (lower is better) Translates to: LRSATSVLFNSVHKTALTLFIFM*GFFTTM Trigger: CATAGTGGTGAAAAAGCCCCACATGAATATAAACAA...TGTCAGTGCTGTTTTATGGACTGAATTAAAAAGGACAGAAGTAGCTGAGCGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR TCA 90 bp	AATCTAGGCAAACAATGCTATCTCAAGGTCTTAACACACCTTACATTCCCATTTATTTTCTCTCCAACATaGCATTTCATCCATGCTAGT	+
Preference number: 2 (lower is better) Translates to: NLGKQCYLKVLTHLTFPFIFSPT*HFIHAS Trigger: ACTAGCATGGATGAAATGTCATGTTGGAGAGAAAAT...AAATGGGAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTGCCTAGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR GCA 90 bp	CACCTTACATTCCCATTTTCTCTCCAACATGACATTTCATCCATGCTAGTGAAAAACAAACATAAACTTTaGCCAGCAAGAATTCCTTCT	+
Preference number: 2 (lower is better) Translates to: HLTFPFSLQHDISSMLVKNKHKL*PARIPS Trigger: AGAAGGAATTCTTGCTGGGCAAAGTTTATGTTTGTT...TTTCACTAGCATGGATGAAATGTCATGTTGGAGAGAAAATGGGAATGTAAGGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR CCA 90 bp	CACCTTACATTCCCATTTTCTCTCCAACATGACATTTCATCCATGCTAGTGAAACCTGTTTTATGTGGATaGGATAATTTGCTACATTGT	+
Preference number: 2 (lower is better) Translates to: HLTFPFSLQHDISSMLVKPVLCG*DNLLHC Trigger: ACAATGTAGCAAATTATCCCATCCACATAAAACAGG...TTTCACTAGCATGGATGAAATGTCATGTTGGAGAGAAAATGGGAATGTAAGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR CCA 90 bp	CTAGGCAAACAATGCTATCTCAAGGTCTTAACACACCTTACATTCCCATTTTCTTTGTTTATATTCATGTaGGGCTTTTTCACCACTATG	+
Preference number: 2 (lower is better) Translates to: LGKQCYLKVLTHLTFPFSLFIFM*GFFTTM Trigger: CATAGTGGTGAAAAAGCCCCACATGAATATAAACAA...AGAAAATGGGAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTGCCTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR CCA 90 bp	CAAACAATGCTATCTCAAGGTCTTAACACACCTTACATTCCCATTTTCTCTCCATTGTTTATATTCATGTaGGGCTTTTTCACCACTATG	+
Preference number: 2 (lower is better) Translates to: QTMLSQGLNTPYIPIFSPLFIFM*GFFTTM Trigger: CATAGTGGTGAAAAAGCCCCACATGAATATAAACAA...TGGAGAGAAAATGGGAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR TCA 90 bp	AGCCTGGAAAGCTGTACTCATGGGTTTTACATCAAGTGTTTAACTTTATTCTTTCAGTTACACTGTGAATaGAAAGTAACAAGGATTCAC	+
Preference number: 2 (lower is better) Translates to: SLESCTHGFYIKCLTLFFQLHCE*KVTRIH Trigger: GTGAATCCTTGTTACTTTTCATTCACAGTGTAACTG...AAAGAATAAAGTTAAACACTTGATGTAAAACCCATGAGTACAGCTTTCCAGGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR-3UTR GCA 90 bp	CACACTTACAACATTGGTAACAAACATAAACTTTGCCCAGCAAGAATTCCTTCTAAACAAGGCAAGTGCTaGTATCAAACAACTTATCTT	+
Preference number: 2 (lower is better) Translates to: HTYNIGNKHKLCPARIPSKQGKC*YQTTYL Trigger: AAGATAAGTTGTTTGATAGCAGCACTTGCCTTGTTT...AGAAGGAATTCTTGCTGGGCAAAGTTTATGTTTGTTACCAATGTTGTAAGTGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR-3UTR CCA 90 bp	TTAACACACCTTACATTCCCATTTTCTCTCCAACATGACATTTCATCCATGCTACCTGTTTTATGTGGATaGGATAATTTGCTACATTGT	+
Preference number: 2 (lower is better) Translates to: LTHLTFPFSLQHDISSMLPVLCG*DNLLHC Trigger: ACAATGTAGCAAATTATCCCATCCACATAAAACAGG...TAGCATGGATGAAATGTCATGTTGGAGAGAAAATGGGAATGTAAGGTGTGTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR CCA 90 bp	CCATTTGGAAATTTTTCCAGTTGGAATTCATTCTCGGAATCTAGGCAAACAATGCCTGTTTTATGTGGATaGGATAATTTGCTACATTGT	+
Preference number: 2 (lower is better) Translates to: PFGNFSSWNSFSESRQTMPVLCG*DNLLHC Trigger: ACAATGTAGCAAATTATCCCATCCACATAAAACAGG...CATTGTTTGCCTAGATTCCGAGAATGAATTCCAACTGGAAAAATTTCCAAATGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR CCA 90 bp	TTGGAAATTTTTCCAGTTGGAATTCATTCTCGGAATCTAGGCAAACAATGCTATTTGTTTATATTCATGTaGGGCTTTTTCACCACTATG	+
Preference number: 2 (lower is better) Translates to: LEIFPVGIHSRNLGKQCYLFIFM*GFFTTM Trigger: CATAGTGGTGAAAAAGCCCCACATGAATATAAACAA...ATAGCATTGTTTGCCTAGATTCCGAGAATGAATTCCAACTGGAAAAATTTCCAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR CCA 90 bp	AGCCTGGAAAGCTGTACTCATGGGTTTTACATCAAGTGTTTAACTTTATTCTTTGAACCTAGCTGGCTTTaGAAGATAAAGATCAAATTA	+
Preference number: 2 (lower is better) Translates to: SLESCTHGFYIKCLTLFFEPSWL*KIKIKL Trigger: TAATTTGATCTTTATCTTCCAAAGCCAGCTAGGTTC...AAAGAATAAAGTTAAACACTTGATGTAAAACCCATGAGTACAGCTTTCCAGGCT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR TCA 72 bp	CTAGAGGATCCCCTCCCAGCTGAGAGCAATCATCCGTaGGAGTGGAGCGGTATTGTAGGGACCCAAGAGCCA	+
Preference number: 3 (lower is better) Translates to: LEDPLPAESNHP*EWSGIVGTQEP Trigger: TGGCTCTTGGGTCCCTACAATACCGCTCCACTCTCACGGATGATTGCTCTCAGCTGGGAGGGGATCCTCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR TCA 72 bp	CTAGGAACAGCAGAGCCTAGAGGATCCCCTCCCAGCTaGGAGCAATCATCCGTGAGAGTGGAGCGGTATTGT	+
Preference number: 3 (lower is better) Translates to: LGTAEPRGSPPS*EQSSVRVERYC Trigger: ACAATACCGCTCCACTCTCACGGATGATTGCTCTCAGCTGGGAGGGGATCCTCTAGGCTCTGCTGTTCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR GCA 72 bp	TCATCTTTCACAGAGGTGGCTGCAGTCCACAGGAGTTaGTCAGTAGGGATGATAAGGCCGGCAGTGCAGCAG	+
Preference number: 3 (lower is better) Translates to: SSFTEVAAVHRS*SVGMIRPAVQQ Trigger: CTGCTGCACTGCCGGCCTTATCATCCCTACTGAGCAACTCCTGTGGACTGCAGCCACCTCTGTGAAAGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR GCA 72 bp	ACTCTAGCCATGGCTTCCTGGGAAGCACAGGGAACATaGTCCTGTGTTGACTCGCTTCTACAGCGTAAGCTG	+
Preference number: 3 (lower is better) Translates to: TLAMASWEAQGT*SCVDSLLQRKL Trigger: CAGCTTACGCTGTAGAAGCGAGTCAACACAGGAGCATGTTCCCTGTGCTTCCCAGGAAGCCATGGCTAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR CCA 72 bp	CACATATTGAGTCAGGGCACTCTAGCCATGGCTTCCTaGGAAGCACAGGGAACATGCTCCTGTGTTGACTCG	+
Preference number: 3 (lower is better) Translates to: HILSQGTLAMAS*EAQGTCSCVDS Trigger: CGAGTCAACACAGGAGCATGTTCCCTGTGCTTCCCAGGAAGCCATGGCTAGAGTGCCCTGACTCAATATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR CCA 72 bp	GATGATAAGGCCGGCAGTGCAGCAGAACCTTCACTTTaGAAAAGACCCGCAAAGGGCTTACTGCCATGGATG	+
Preference number: 3 (lower is better) Translates to: DDKAGSAAEPSL*KRPAKGLLPWM Trigger: CATCCATGGCAGTAAGCCCTTTGCGGGTCTTTTCCAAAGTGAAGGTTCTGCTGCACTGCCGGCCTTATCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR CCA 72 bp	CATGCTCCTGTGTTGACTCGCTTCTACAGCGTAAGCTaGCAATTCCCTCATGGGACTTCCAGAGCCTCTAAA	+
Preference number: 3 (lower is better) Translates to: HAPVLTRFYSVS*QFPHGTSRASK Trigger: TTTAGAGGCTCTGGAAGTCCCATGAGGGAATTGCCAGCTTACGCTGTAGAAGCGAGTCAACACAGGAGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR-3UTR CAA 90 bp	GCGATTCTTCATAACTGCATGACTTTGAGAGATGCCCCCACAGCCTCCTGGAACGCAAGAATTCCTTCTTaGAAGGACACTGTGACCCCT	+
Preference number: 3 (lower is better) Translates to: AILHNCMTLRDAPTASWNARIPS*KDTVTP Trigger: AGGGGTCACAGTGTCCTTCAAAGAAGGAATTCTTGC...GTTCCAGGAGGCTGTGGGGGCATCTCTCAAAGTCATGCAGTTATGAAGAATCGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR TCA 72 bp	TTTACGAAGGTCTGTTCTCCCCAGACCGTGCATCAATaGCAGGGACCAAGAATGATTCTACCCAAGTGGGCT	+
Preference number: 3 (lower is better) Translates to: FTKVCSPQTVHQ*QGPRMILPKWA Trigger: AGCCCACTTGGGTAGAATCATTCTTGGTCCCTGTCATTGATGCACGGTCTGGGGAGAACAGACCTTCGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR GCA 72 bp	CTCAGTTTCATGTCTCATTGCCTGCAACAAGGAGCATaGACCTTGTGGCATAGTCTGTCCCACACATGCATC	+
Preference number: 3 (lower is better) Translates to: LSFMSHCLQQGA*TLWHSLSHTCI Trigger: GATGCATGTGTGGGACAGACTATGCCACAAGGTGCATGCTCCTTGTTGCAGGCAATGAGACATGAAACTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR GCA 72 bp	AGCCAACACTCAGCCTCAGTTTCATGTCTCATTGCCTaGAACAAGGAGCATGCACCTTGTGGCATAGTCTGT	+
Preference number: 3 (lower is better) Translates to: SQHSASVSCLIA*NKEHAPCGIVC Trigger: ACAGACTATGCCACAAGGTGCATGCTCCTTGTTGCAGGCAATGAGACATGAAACTGAGGCTGAGTGTTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR CCA 72 bp	ATGTCTCATTGCCTGCAACAAGGAGCATGCACCTTGTaGCATAGTCTGTCCCACACATGCATCTTTCAGGGA	+
Preference number: 3 (lower is better) Translates to: MSHCLQQGACTL*HSLSHTCIFQG Trigger: TCCCTGAAAGATGCATGTGTGGGACAGACTATGCCACAAGGTGCATGCTCCTTGTTGCAGGCAATGAGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR TCA 72 bp	TTCCCAGGTGACACCAGATTGTGTCAAGTTGACAGCTaGAGCACCCATCCAAAACAGAAAGAAGCACAGCAC	+
Preference number: 3 (lower is better) Translates to: FPGDTRLCQVDS*STHPKQKEAQH Trigger: GTGCTGTGCTTCTTTCTGTTTTGGATGGGTGCTTCAGCTGTCAACTTGACACAATCTGGTGTCACCTGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR TCA 72 bp	GCCATGGATGCTGAACCTTCAAAAAGAGCCCTTCAGTaGCTTGTCACCACCACTCATGTCAGAAACAAGGCA	+
Preference number: 3 (lower is better) Translates to: AMDAEPSKRALQ*LVTTTHVRNKA Trigger: TGCCTTGTTTCTGACATGAGTGGTGGTGACAAGTCACTGAAGGGCTCTTTTTGAAGGTTCAGCATCCATGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR CCA 72 bp	TCACTTTGGAAAAGACCCGCAAAGGGCTTACTGCCATaGATGCTGAACCTTCAAAAAGAGCCCTTCAGTGAC	+
Preference number: 3 (lower is better) Translates to: SLWKRPAKGLLP*MLNLQKEPFSD Trigger: GTCACTGAAGGGCTCTTTTTGAAGGTTCAGCATCCATGGCAGTAAGCCCTTTGCGGGTCTTTTCCAAAGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR-3UTR CAA 90 bp	GCACTTGGGAAGCAGAGGCAGGTAGATTTCAAGGCCAGCCTGGTCTACAAAGTGTTAATCTGTAATTGCTaGTCCTTCCAGAAGCCATCT	+
Preference number: 3 (lower is better) Translates to: ALGKQRQVDFKASLVYKVLICNC*SFQKPS Trigger: AGATGGCTTCTGGAAGGACAAGCAATTACAGATTAA...CACTTTGTAGACCAGGCTGGCCTTGAAATCTACCTGCCTCTGCTTCCCAAGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR-3UTR CAA 90 bp	CCAGATTGTGTCAAGTTGACAGCTGAAGCACCCATCCAAAACAGAAAGAAGCACGCAAGAATTCCTTCTTaGAAGGACACTGTGACCCCT	+
Preference number: 3 (lower is better) Translates to: PDCVKLTAEAPIQNRKKHARIPS*KDTVTP Trigger: AGGGGTCACAGTGTCCTTCAAAGAAGGAATTCTTGC...GTGCTTCTTTCTGTTTTGGATGGGTGCTTCAGCTGTCAACTTGACACAATCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR GCA 72 bp	AAGAAGCACAGCACATTAGGGCACAGCCTTCACCCCTaGTGGATGTTTCAGACGGATGTAAACACAACTTTA	+
Preference number: 3 (lower is better) Translates to: KKHSTLGHSLHP*WMFQTDVNTTL Trigger: TAAAGTTGTGTTTACATCCGTCTGAAACATCCAGCAGGGGTGAAGGCTGTGCCCTAATGTGCTGTGCTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR GCA 72 bp	ATGTATCTCCTTACAACTGCTACACATGTGGGTAAGTaGCTGCTAGCCAACACTCAGCCTCAGTTTCATGTC	+
Preference number: 3 (lower is better) Translates to: MYLLTTATHVGK*LLANTQPQFHV Trigger: GACATGAAACTGAGGCTGAGTGTTGGCTAGCAGGCACTTACCCACATGTGTAGCAGTTGTAAGGAGATACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR CCA 72 bp	AGATGCCCCCACAGCCTCCTGGAACCTAGCTGGCTTTaGAAGATAAAGATCAAATTACTGTCCATCCCATTT	+
Preference number: 3 (lower is better) Translates to: RCPHSLLEPSWL*KIKIKLLSIPF Trigger: AAATGGGATGGACAGTAATTTGATCTTTATCTTCCAAAGCCAGCTAGGTTCCAGGAGGCTGTGGGGGCATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR CCA 72 bp	TTTGAGAGATGCCCCCACAGCCTCCTGGAACCTAGCTaGCTTTGGAAGATAAAGATCAAATTACTGTCCATC	+
Preference number: 3 (lower is better) Translates to: FERCPHSLLEPS*LWKIKIKLLSI Trigger: GATGGACAGTAATTTGATCTTTATCTTCCAAAGCCAGCTAGGTTCCAGGAGGCTGTGGGGGCATCTCTCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR-3UTR CAA 90 bp	CGCTCAGCTACTTCTGTCCTTTTTAATTCAGTCCATAAAACAGCACTGACAGCACCAGATTGTGTCAAGTaGACAGCTGAAGCACCCATC	+
Preference number: 3 (lower is better) Translates to: RSATSVLFNSVHKTALTAPDCVK*TAEAPI Trigger: GATGGGTGCTTCAGCTGTCAACTTGACACAATCTGG...TGCTGTCAGTGCTGTTTTATGGACTGAATTAAAAAGGACAGAAGTAGCTGAGCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR CCA 72 bp	AAGCACAGCACATTAGGGCACAGCCTTCACCCCTGCTaGATGTTTCAGACGGATGTAAACACAACTTTAAAA	+
Preference number: 3 (lower is better) Translates to: KHSTLGHSLHPC*MFQTDVNTTLK Trigger: TTTTAAAGTTGTGTTTACATCCGTCTGAAACATCCAGCAGGGGTGAAGGCTGTGCCCTAATGTGCTGTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR CAA 90 bp	TTAGGGCACAGCCTTCACCCCTGCTGGATGTTTCAGACGGATGTAAACACAACTTGGAAATTTTTCCAGTaGGAATTCATTCTCGGAATC	+
Preference number: 3 (lower is better) Translates to: LGHSLHPCWMFQTDVNTTWKFFQ*EFILGI Trigger: GATTCCGAGAATGAATTCCAACTGGAAAAATTTCCA...AGTTGTGTTTACATCCGTCTGAAACATCCAGCAGGGGTGAAGGCTGTGCCCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR TCA 72 bp	AGCAAGAATTCCTTCTTTGAAGGACACTGTGACCCCTaGAGGCTACCCACACTGTTTACAGATAAAAGGTTC	+
Preference number: 3 (lower is better) Translates to: SKNSFFEGHCDP*RLPTLFTDKRF Trigger: GAACCTTTTATCTGTAAACAGTGTGGGTAGCCTTCAGGGGTCACAGTGTCCTTCAAAGAAGGAATTCTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR TCA 72 bp	TACCTTCAGAATCATTTTCTTCAGTGTGGCCTCCTCTaGGCTCCTTGTAGTCATAGTTGTGATGTCCGTTGT	+
Preference number: 3 (lower is better) Translates to: YLQNHFLQCGLL*APCSHSCDVRC Trigger: ACAACGGACATCACAACTATGACTACAAGGAGCTCAGAGGAGGCCACACTGAAGAAAATGATTCTGAAGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238201.2
3UTR GCA 72 bp	GGCAAGTGCTGCTATCAAACAACTTATCTTTGGTTCTaGTGTGTGCAGATCCAGGCAGTCTTAGTTTCATTC	+
Preference number: 3 (lower is better) Translates to: GKCCYQTTYLWF*CVQIQAVLVSF Trigger: GAATGAAACTAAGACTGCCTGGATCTGCACACAGCAGAACCAAAGATAAGTTGTTTGATAGCAGCACTTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR GCA 72 bp	TGTCACCACCACTCATGTCAGAAACAAGGCAAGTGCTaGTATCAAACAACTTATCTTTGGTTCTGCTGTGTG	+
Preference number: 3 (lower is better) Translates to: CHHHSCQKQGKC*YQTTYLWFCCV Trigger: CACACAGCAGAACCAAAGATAAGTTGTTTGATAGCAGCACTTGCCTTGTTTCTGACATGAGTGGTGGTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR-3UTR CAA 90 bp	CACTCACAGAACTGCCCACCTTCCAACACTATGAGCATCTTAAACAACTGTGACCACAGCTGTTTCCATTaGGAAATTTTTCCAGTTGGA	+
Preference number: 3 (lower is better) Translates to: HSQNCPPSNTMSILNNCDHSCFH*EIFPVG Trigger: TCCAACTGGAAAAATTTCCAAATGGAAACAGCTGTG...GTCACAGTTGTTTAAGATGCTCATAGTGTTGGAAGGTGGGCAGTTCTGTGAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR TCA 72 bp	ATGTTTCAGACGGATGTAAACACAACTTTAAAACCCTaGAGACATTTACGAAGGTCTGTTCTCCCCAGACCG	+
Preference number: 3 (lower is better) Translates to: MFQTDVNTTLKP*RHLRRSVLPRP Trigger: CGGTCTGGGGAGAACAGACCTTCGTAAATGTCTTCAGGGTTTTAAAGTTGTGTTTACATCCGTCTGAAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR GCA 72 bp	ACTTGTCACCACCACTCATGTCAGAAACAAGGCAAGTaGTGCTATCAAACAACTTATCTTTGGTTCTGCTGT	+
Preference number: 3 (lower is better) Translates to: TCHHHSCQKQGK*CYQTTYLWFCC Trigger: ACAGCAGAACCAAAGATAAGTTGTTTGATAGCAGCACTTGCCTTGTTTCTGACATGAGTGGTGGTGACAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR GCA 72 bp	GTGGAGCGGTATTGTAGGGACCCAAGAGCCATGATTTaGCCAAGCAATGGGAATATTTTTAGAATACATACT	+
Preference number: 3 (lower is better) Translates to: VERYCRDPRAMI*PSNGNIFRIHT Trigger: AGTATGTATTCTAAAAATATTCCCATTGCTTGGGCAAATCATGGCTCTTGGGTCCCTACAATACCGCTCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR CCA 72 bp	AAACAAGGCAAGTGCTGCTATCAAACAACTTATCTTTaGTTCTGCTGTGTGCAGATCCAGGCAGTCTTAGTT	+
Preference number: 3 (lower is better) Translates to: KQGKCCYQTTYL*FCCVQIQAVLV Trigger: AACTAAGACTGCCTGGATCTGCACACAGCAGAACCAAAGATAAGTTGTTTGATAGCAGCACTTGCCTTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR-3UTR CAA 90 bp	CACCTTACATTCCCATTTTCTCTCCAACATGACATTTCATCCATGCTAGTGAAAGCAAGAATTCCTTCTTaGAAGGACACTGTGACCCCT	+
Preference number: 3 (lower is better) Translates to: HLTFPFSLQHDISSMLVKARIPS*KDTVTP Trigger: AGGGGTCACAGTGTCCTTCAAAGAAGGAATTCTTGC...TTTCACTAGCATGGATGAAATGTCATGTTGGAGAGAAAATGGGAATGTAAGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR CAA 90 bp	ATTAAATTCCCACGCTCCTTACACTCACAGAACTGCCCACCTTCCAACACTATGTGGAAATTTTTCCAGTaGGAATTCATTCTCGGAATC	+
Preference number: 3 (lower is better) Translates to: IKFPRSLHSQNCPPSNTMWKFFQ*EFILGI Trigger: GATTCCGAGAATGAATTCCAACTGGAAAAATTTCCA...CATAGTGTTGGAAGGTGGGCAGTTCTGTGAGTGTAAGGAGCGTGGGAATTTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR CAA 90 bp	CCAGATTGTGTCAAGTTGACAGCTGAAGCACCCATCCAAAACAGAAAGAAGCACTGTTCTTTCATTCCTTaGAAGGAAATGGGGATAATG	+
Preference number: 3 (lower is better) Translates to: PDCVKLTAEAPIQNRKKHCSFIP*KEMGIM Trigger: CATTATCCCCATTTCCTTCAAAGGAATGAAAGAACA...GTGCTTCTTTCTGTTTTGGATGGGTGCTTCAGCTGTCAACTTGACACAATCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238201.2
3UTR TCA 72 bp	CTTCTGTCCTTTTTAATTCAGTCCATAAAACAGCACTaGCAGCATTCAGGATGGGTCTTCCTACCTCAAATC	+
Preference number: 3 (lower is better) Translates to: LLSFLIQSIKQH*QHSGWVFLPQI Trigger: GATTTGAGGTAGGAAGACCCATCCTGAATGCTGTCAGTGCTGTTTTATGGACTGAATTAAAAAGGACAGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR GCA 72 bp	CCAGTTGGAATTCATTCTCGGAATCTAGGCAAACAATaGTATCTCAAGGTCTTAACACACCTTACATTCCCA	+
Preference number: 3 (lower is better) Translates to: PVGIHSRNLGKQ*YLKVLTHLTFP Trigger: TGGGAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTGCCTAGATTCCGAGAATGAATTCCAACTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR CAA 90 bp	AATCTAGGCAAACAATGCTATCTCAAGGTCTTAACACACCTTACATTCCCATTTGCAAGAATTCCTTCTTaGAAGGACACTGTGACCCCT	+
Preference number: 3 (lower is better) Translates to: NLGKQCYLKVLTHLTFPFARIPS*KDTVTP Trigger: AGGGGTCACAGTGTCCTTCAAAGAAGGAATTCTTGC...AAATGGGAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTGCCTAGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR CAA 90 bp	CACACTTACAACATTGGTAACAAACATAAACTTTGCCCAGCAAGAATTCCTTCTGCAAGAATTCCTTCTTaGAAGGACACTGTGACCCCT	+
Preference number: 3 (lower is better) Translates to: HTYNIGNKHKLCPARIPSARIPS*KDTVTP Trigger: AGGGGTCACAGTGTCCTTCAAAGAAGGAATTCTTGC...AGAAGGAATTCTTGCTGGGCAAAGTTTATGTTTGTTACCAATGTTGTAAGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR-3UTR CAA 90 bp	AATCTAGGCAAACAATGCTATCTCAAGGTCTTAACACACCTTACATTCCCATTTCACAGCTGTTTCCATTaGGAAATTTTTCCAGTTGGA	+
Preference number: 3 (lower is better) Translates to: NLGKQCYLKVLTHLTFPFHSCFH*EIFPVG Trigger: TCCAACTGGAAAAATTTCCAAATGGAAACAGCTGTG...AAATGGGAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTGCCTAGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR TCA 72 bp	TGTCCATCCCATTTACATCCTCTGACCACAGAGTACTaGACAGTGATTAGTTATACACTAGTATTGACAAAT	+
Preference number: 3 (lower is better) Translates to: CPSHLHPLTTEY*TVISYTLVLTN Trigger: ATTTGTCAATACTAGTGTATAACTAATCACTGTTCAGTACTCTGTGGTCAGAGGATGTAAATGGGATGGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR-3UTR CAA 90 bp	CACACTTACAACATTGGTAACAAACATAAACTTTGCCCAGCAAGAATTCCTTCTTGGAAATTTTTCCAGTaGGAATTCATTCTCGGAATC	+
Preference number: 3 (lower is better) Translates to: HTYNIGNKHKLCPARIPSWKFFQ*EFILGI Trigger: GATTCCGAGAATGAATTCCAACTGGAAAAATTTCCA...AGAAGGAATTCTTGCTGGGCAAAGTTTATGTTTGTTACCAATGTTGTAAGTGTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR CAA 72 bp	CTCATCTTTCACAGAGGTGGCTGCAGTCCACAGGAGTaGCTCAGTAGGGATGATAAGGCCGGCAGTGCAGCA	+
Preference number: 4 (lower is better) Translates to: LIFHRGGCSPQE*LSRDDKAGSAA Trigger: TGCTGCACTGCCGGCCTTATCATCCCTACTGAGCAACTCCTGTGGACTGCAGCCACCTCTGTGAAAGATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
3UTR CAA 72 bp	TGGCTTCCTGGGAAGCACAGGGAACATGCTCCTGTGTaGACTCGCTTCTACAGCGTAAGCTGGCAATTCCCT	+
Preference number: 4 (lower is better) Translates to: WLPGKHREHAPV*TRFYSVSWQFP Trigger: AGGGAATTGCCAGCTTACGCTGTAGAAGCGAGTCAACACAGGAGCATGTTCCCTGTGCTTCCCAGGAAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
CDS-3UTR TCA 90 bp	GCTGAAGCACCCATCCAAAACAGAAAGAAGCACAGCACATTAGGGCACAGCCTTCCCACTCATCCTGGGTaGAGTGCACCACCAGATCCT	+
Preference number: 4 (lower is better) Translates to: AEAPIQNRKKHSTLGHSLPTHPG*SAPPDP Trigger: AGGATCTGGTGGTGCACTTCACCCAGGATGAGTGGG...AAGGCTGTGCCCTAATGTGCTGTGCTTCTTTCTGTTTTGGATGGGTGCTTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	CAAAACAGAAAGAAGCACAGCACATTAGGGCACAGCCTTCACCCCTGCTGGATGAGGAACTGTGCCTGCTaGAGGATCTGCCACACTGTC	+
Preference number: 4 (lower is better) Translates to: QNRKKHSTLGHSLHPCWMRNCAC*RICHTV Trigger: GACAGTGTGGCAGATCCTTCAGCAGGCACAGTTCCT...CATCCAGCAGGGGTGAAGGCTGTGCCCTAATGTGCTGTGCTTCTTTCTGTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	GTAACCATTAAATTCCCACGCTCCTTACACTCACAGAACTGCCCACCTTCCAACAGGACGCCTGACACCTaGAGGCTTTCCCACACTCTT	+
Preference number: 4 (lower is better) Translates to: VTIKFPRSLHSQNCPPSNRTPDT*RLSHTL Trigger: AAGAGTGTGGGAAAGCCTTCAGGTGTCAGGCGTCCT...GTTGGAAGGTGGGCAGTTCTGTGAGTGTAAGGAGCGTGGGAATTTAATGGTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	CTAGTGAGACTCCTTTCCCAGGTGACACCAGATTGTGTCAAGTTGACAGCTGAAAGGACGCCTGACACCTaGAGGCTTTCCCACACTCTT	+
Preference number: 4 (lower is better) Translates to: LVRLLSQVTPDCVKLTAERTPDT*RLSHTL Trigger: AAGAGTGTGGGAAAGCCTTCAGGTGTCAGGCGTCCT...TTCAGCTGTCAACTTGACACAATCTGGTGTCACCTGGGAAAGGAGTCTCACTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	GTAACCATTAAATTCCCACGCTCCTTACACTCACAGAACTGCCCACCTTCCAACAGGAACTGTGCCTGCTaGAGGATCTGCCACACTGTC	+
Preference number: 4 (lower is better) Translates to: VTIKFPRSLHSQNCPPSNRNCAC*RICHTV Trigger: GACAGTGTGGCAGATCCTTCAGCAGGCACAGTTCCT...GTTGGAAGGTGGGCAGTTCTGTGAGTGTAAGGAGCGTGGGAATTTAATGGTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR CAA 72 bp	GAGGGGCTCCTAGCTCCTCCGGTTTTCTTTCATCAGTaGTTCCACATATTGAGTCAGGGCACTCTAGCCATG	+
Preference number: 4 (lower is better) Translates to: EGLLAPPVFFHQ*FHILSQGTLAM Trigger: CATGGCTAGAGTGCCCTGACTCAATATGTGGAACAACTGATGAAAGAAAACCGGAGGAGCTAGGAGCCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
CDS-3UTR TCA 90 bp	CTGCTATCAAACAACTTATCTTTGGTTCTGCTGTGTGCAGATCCAGGCAGTCTTCCCACTCATCCTGGGTaGAGTGCACCACCAGATCCT	+
Preference number: 4 (lower is better) Translates to: LLSNNLSLVLLCADPGSLPTHPG*SAPPDP Trigger: AGGATCTGGTGGTGCACTTCACCCAGGATGAGTGGG...AAGACTGCCTGGATCTGCACACAGCAGAACCAAAGATAAGTTGTTTGATAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
CDS-3UTR TCA 90 bp	GTAACCATTAAATTCCCACGCTCCTTACACTCACAGAACTGCCCACCTTCCAACCAGTGTGGCCTCCTCTaGGCTCCTTGTAGTCATAGT	+
Preference number: 4 (lower is better) Translates to: VTIKFPRSLHSQNCPPSNQCGLL*APCSHS Trigger: ACTATGACTACAAGGAGCTCAGAGGAGGCCACACTG...GTTGGAAGGTGGGCAGTTCTGTGAGTGTAAGGAGCGTGGGAATTTAATGGTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	CCAGATTGTGTCAAGTTGACAGCTGAAGCACCCATCCAAAACAGAAAGAAGCACAGGACGCCTGACACCTaGAGGCTTTCCCACACTCTT	+
Preference number: 4 (lower is better) Translates to: PDCVKLTAEAPIQNRKKHRTPDT*RLSHTL Trigger: AAGAGTGTGGGAAAGCCTTCAGGTGTCAGGCGTCCT...GTGCTTCTTTCTGTTTTGGATGGGTGCTTCAGCTGTCAACTTGACACAATCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR CAA 72 bp	ACAAGAGAACAGGCGATTCTTCATAACTGCATGACTTaGAGAGATGCCCCCACAGCCTCCTGGAACCTAGCT	+
Preference number: 4 (lower is better) Translates to: TREQAILHNCMT*RDAPTASWNLA Trigger: AGCTAGGTTCCAGGAGGCTGTGGGGGCATCTCTCAAAGTCATGCAGTTATGAAGAATCGCCTGTTCTCTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
CDS-3UTR TCA 90 bp	ATTAAATTCCCACGCTCCTTACACTCACAGAACTGCCCACCTTCCAACACTATGCAGTGTGGCCTCCTCTaGGCTCCTTGTAGTCATAGT	+
Preference number: 4 (lower is better) Translates to: IKFPRSLHSQNCPPSNTMQCGLL*APCSHS Trigger: ACTATGACTACAAGGAGCTCAGAGGAGGCCACACTG...CATAGTGTTGGAAGGTGGGCAGTTCTGTGAGTGTAAGGAGCGTGGGAATTTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	CAGAAAGAAGCACAGCACATTAGGGCACAGCCTTCACCCCTGCTGGATGTTTCAATTCTTTCATGTAACTaGAGGGCGCTGGGATACCTA	+
Preference number: 4 (lower is better) Translates to: QKEAQHIRAQPSPLLDVSILSCN*RALGYL Trigger: TAGGTATCCCAGCGCCCTTCAGTTACATGAAAGAAT...TGAAACATCCAGCAGGGGTGAAGGCTGTGCCCTAATGTGCTGTGCTTCTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	GAGGAACCGTGGAGTTTAATTTGGGGTATTTACAAGAGTACAGGCAAGTCATGGAGGACGCCTGACACCTaGAGGCTTTCCCACACTCTT	+
Preference number: 4 (lower is better) Translates to: EEPWSLIWGIYKSTGKSWRTPDT*RLSHTL Trigger: AAGAGTGTGGGAAAGCCTTCAGGTGTCAGGCGTCCT...CCATGACTTGCCTGTACTCTTGTAAATACCCCAAATTAAACTCCACGGTTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	ATTAAATTCCCACGCTCCTTACACTCACAGAACTGCCCACCTTCCAACACTATGAGTCGAAGCGAGGACTaGCACCTAAAGGCTTTACCG	+
Preference number: 4 (lower is better) Translates to: IKFPRSLHSQNCPPSNTMSRSED*HLKALP Trigger: CGGTAAAGCCTTTAGGTGTCAGTCCTCGCTTCGACT...CATAGTGTTGGAAGGTGGGCAGTTCTGTGAGTGTAAGGAGCGTGGGAATTTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR CAA 72 bp	TTCATGTCTCATTGCCTGCAACAAGGAGCATGCACCTaGTGGCATAGTCTGTCCCACACATGCATCTTTCAG	+
Preference number: 4 (lower is better) Translates to: FMSHCLQQGACT*WHSLSHTCIFQ Trigger: CTGAAAGATGCATGTGTGGGACAGACTATGCCACAAGGTGCATGCTCCTTGTTGCAGGCAATGAGACATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
CDS-3UTR TCA 90 bp	TCTCGGAATCTAGGCAAACAATGCTATCTCAAGGTCTTAACACACCTTACATTCCCCACTCATCCTGGGTaGAGTGCACCACCAGATCCT	+
Preference number: 4 (lower is better) Translates to: SRNLGKQCYLKVLTHLTFPTHPG*SAPPDP Trigger: AGGATCTGGTGGTGCACTTCACCCAGGATGAGTGGG...GAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTGCCTAGATTCCGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	ATGAGCATCTTAAACAACTGTGACCATGAAGGCTTCACAGCTGTTTCCATTTGGAGGACGCCTGACACCTaGAGGCTTTCCCACACTCTT	+
Preference number: 4 (lower is better) Translates to: MSILNNCDHEGFTAVSIWRTPDT*RLSHTL Trigger: AAGAGTGTGGGAAAGCCTTCAGGTGTCAGGCGTCCT...CCAAATGGAAACAGCTGTGAAGCCTTCATGGTCACAGTTGTTTAAGATGCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	AACACTATGAGCATCTTAAACAACTGTGACCATGAAGGCTTCACAGCTGTTTCCCAGTGTGGCCTCCTCTaGGCTCCTTGTAGTCATAGT	+
Preference number: 4 (lower is better) Translates to: NTMSILNNCDHEGFTAVSQCGLL*APCSHS Trigger: ACTATGACTACAAGGAGCTCAGAGGAGGCCACACTG...GGAAACAGCTGTGAAGCCTTCATGGTCACAGTTGTTTAAGATGCTCATAGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	ATGAGCATCTTAAACAACTGTGACCATGAAGGCTTCACAGCTGTTTCCATTTGGCAGTGTGGCCTCCTCTaGGCTCCTTGTAGTCATAGT	+
Preference number: 4 (lower is better) Translates to: MSILNNCDHEGFTAVSIWQCGLL*APCSHS Trigger: ACTATGACTACAAGGAGCTCAGAGGAGGCCACACTG...CCAAATGGAAACAGCTGTGAAGCCTTCATGGTCACAGTTGTTTAAGATGCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	CAAAACAGAAAGAAGCACAGCACATTAGGGCACAGCCTTCACCCCTGCTGGATGATTTTGTCTTCTTTCTaGAGGGAACCGGAAGTTTTC	+
Preference number: 4 (lower is better) Translates to: QNRKKHSTLGHSLHPCWMILSSF*REPEVF Trigger: GAAAACTTCCGGTTCCCTTCAGAAAGAAGACAAAAT...CATCCAGCAGGGGTGAAGGCTGTGCCCTAATGTGCTGTGCTTCTTTCTGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	CAGGTGACACCAGATTGTGTCAAGTTGACAGCTGAAGCACCCATCCAAAACAGAATTCTTTCATGTAACTaGAGGGCGCTGGGATACCTA	+
Preference number: 4 (lower is better) Translates to: QVTPDCVKLTAEAPIQNRILSCN*RALGYL Trigger: TAGGTATCCCAGCGCCCTTCAGTTACATGAAAGAAT...TCTGTTTTGGATGGGTGCTTCAGCTGTCAACTTGACACAATCTGGTGTCACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	GCTAGCCAACACTCAGCCTCAGTTTCATGTCTCATTGCCTGCAACAAGGAGCATGGGTCCTGTGACTTCTaGAAAATTTCCCACATTGTT	+
Preference number: 4 (lower is better) Translates to: ASQHSASVSCLIACNKEHGSCDF*KISHIV Trigger: AACAATGTGGGAAATTTTTCAGAAGTCACAGGACCC...ATGCTCCTTGTTGCAGGCAATGAGACATGAAACTGAGGCTGAGTGTTGGCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
CDS-3UTR TCA 90 bp	CACCACTCATGTCAGAAACAAGGCAAGTGCTGCTATCAAACAACTTATCTTTGGAGTCGAAGCGAGGACTaGCACCTAAAGGCTTTACCG	+
Preference number: 4 (lower is better) Translates to: HHSCQKQGKCCYQTTYLWSRSED*HLKALP Trigger: CGGTAAAGCCTTTAGGTGTCAGTCCTCGCTTCGACT...CCAAAGATAAGTTGTTTGATAGCAGCACTTGCCTTGTTTCTGACATGAGTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
CDS-3UTR TCA 90 bp	GCTAGCCAACACTCAGCCTCAGTTTCATGTCTCATTGCCTGCAACAAGGAGCATATGTCTTCTTTCATGTaGTCGAAGGTAAGAGCGATG	+
Preference number: 4 (lower is better) Translates to: ASQHSASVSCLIACNKEHMSSFM*SKVRAM Trigger: CATCGCTCTTACCTTCGATCACATGAAAGAAGACAT...ATGCTCCTTGTTGCAGGCAATGAGACATGAAACTGAGGCTGAGTGTTGGCTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
CDS-3UTR TCA 90 bp	TTAGGGCACAGCCTTCACCCCTGCTGGATGTTTCAGACGGATGTAAACACAACTATGTCTTCTTTCATGTaGTCGAAGGTAAGAGCGATG	+
Preference number: 4 (lower is better) Translates to: LGHSLHPCWMFQTDVNTTMSSFM*SKVRAM Trigger: CATCGCTCTTACCTTCGATCACATGAAAGAAGACAT...AGTTGTGTTTACATCCGTCTGAAACATCCAGCAGGGGTGAAGGCTGTGCCCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	TTGCGCTCAGCTACTTCTGTCCTTTTTAATTCAGTCCATAAAACAGCACTGACAAGGAACTGTGCCTGCTaGAGGATCTGCCACACTGTC	+
Preference number: 4 (lower is better) Translates to: LRSATSVLFNSVHKTALTRNCAC*RICHTV Trigger: GACAGTGTGGCAGATCCTTCAGCAGGCACAGTTCCT...TGTCAGTGCTGTTTTATGGACTGAATTAAAAAGGACAGAAGTAGCTGAGCGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CCA 90 bp	CAAAACAGAAAGAAGCACAGCACATTAGGGCACAGCCTTCACCCCTGCTGGATGTCAGGATCTTCACAATaGTCTTCAATTGCCTCATCT	+
Preference number: 4 (lower is better) Translates to: QNRKKHSTLGHSLHPCWMSGSSQ*SSIASS Trigger: AGATGAGGCAATTGAAGACCATTGTGAAGATCCTGA...CATCCAGCAGGGGTGAAGGCTGTGCCCTAATGTGCTGTGCTTCTTTCTGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR CAA 72 bp	AGACTCCTTTCCCAGGTGACACCAGATTGTGTCAAGTaGACAGCTGAAGCACCCATCCAAAACAGAAAGAAG	+
Preference number: 4 (lower is better) Translates to: RLLSQVTPDCVK*TAEAPIQNRKK Trigger: CTTCTTTCTGTTTTGGATGGGTGCTTCAGCTGTCAACTTGACACAATCTGGTGTCACCTGGGAAAGGAGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR CAA 72 bp	TGGATGCTGAACCTTCAAAAAGAGCCCTTCAGTGACTaGTCACCACCACTCATGTCAGAAACAAGGCAAGTG	+
Preference number: 4 (lower is better) Translates to: WMLNLQKEPFSD*SPPLMSETRQV Trigger: CACTTGCCTTGTTTCTGACATGAGTGGTGGTGACAAGTCACTGAAGGGCTCTTTTTGAAGGTTCAGCATCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
CDS-3UTR TCA 90 bp	CCATTTGGAAATTTTTCCAGTTGGAATTCATTCTCGGAATCTAGGCAAACAATGCCCACTCATCCTGGGTaGAGTGCACCACCAGATCCT	+
Preference number: 4 (lower is better) Translates to: PFGNFSSWNSFSESRQTMPTHPG*SAPPDP Trigger: AGGATCTGGTGGTGCACTTCACCCAGGATGAGTGGG...CATTGTTTGCCTAGATTCCGAGAATGAATTCCAACTGGAAAAATTTCCAAATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	TTGCGCTCAGCTACTTCTGTCCTTTTTAATTCAGTCCATAAAACAGCACTGACACAGTGTGGCCTCCTCTaGGCTCCTTGTAGTCATAGT	+
Preference number: 4 (lower is better) Translates to: LRSATSVLFNSVHKTALTQCGLL*APCSHS Trigger: ACTATGACTACAAGGAGCTCAGAGGAGGCCACACTG...TGTCAGTGCTGTTTTATGGACTGAATTAAAAAGGACAGAAGTAGCTGAGCGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	GCACACGTCTTTAATCCCACAGCACTTGGGAAGCAGAGGCAGGTAGATTTCAAGAACTTAAGGGTCCTGTaGCTTCTGAAAAATTTCCCA	+
Preference number: 4 (lower is better) Translates to: AHVFNPTALGKQRQVDFKNLRVL*LLKNFP Trigger: TGGGAAATTTTTCAGAAGTCACAGGACCCTTAAGTT...CTTGAAATCTACCTGCCTCTGCTTCCCAAGTGCTGTGGGATTAAAGACGTGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
CDS-3UTR TCA 90 bp	GCTGAAGCACCCATCCAAAACAGAAAGAAGCACAGCACATTAGGGCACAGCCTTAACTTAAGGGTCCTGTaGCTTCTGAAAAATTTCCCA	+
Preference number: 4 (lower is better) Translates to: AEAPIQNRKKHSTLGHSLNLRVL*LLKNFP Trigger: TGGGAAATTTTTCAGAAGTCACAGGACCCTTAAGTT...AAGGCTGTGCCCTAATGTGCTGTGCTTCTTTCTGTTTTGGATGGGTGCTTCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	AACAACTGTGACCATGAAGGCTTCACAGCTGTTTCCATTTGGAAATTTTTCCAGAGTCGAAGCGAGGACTaGCACCTAAAGGCTTTACCG	+
Preference number: 4 (lower is better) Translates to: NNCDHEGFTAVSIWKFFQSRSED*HLKALP Trigger: CGGTAAAGCCTTTAGGTGTCAGTCCTCGCTTCGACT...CTGGAAAAATTTCCAAATGGAAACAGCTGTGAAGCCTTCATGGTCACAGTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR CAA 72 bp	AACAAACATAAACTTTGCCCAGCAAGAATTCCTTCTTaGAAGGACACTGTGACCCCTGAAGGCTACCCACAC	+
Preference number: 4 (lower is better) Translates to: NKHKLCPARIPS*KDTVTPEGYPH Trigger: GTGTGGGTAGCCTTCAGGGGTCACAGTGTCCTTCAAAGAAGGAATTCTTGCTGGGCAAAGTTTATGTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR CAA 72 bp	CACCGCATAAATCCCAAGGCAGACAGCAAGGAATCTTaGCGCTCAGCTACTTCTGTCCTTTTTAATTCAGTC	+
Preference number: 4 (lower is better) Translates to: HRINPKADSKES*RSATSVLFNSV Trigger: GACTGAATTAAAAAGGACAGAAGTAGCTGAGCGCAAAGATTCCTTGCTGTCTGCCTTGGGATTTATGCGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CCA 90 bp	CTAGTGAGACTCCTTTCCCAGGTGACACCAGATTGTGTCAAGTTGACAGCTGAATCAGGATCTTCACAATaGTCTTCAATTGCCTCATCT	+
Preference number: 4 (lower is better) Translates to: LVRLLSQVTPDCVKLTAESGSSQ*SSIASS Trigger: AGATGAGGCAATTGAAGACCATTGTGAAGATCCTGA...TTCAGCTGTCAACTTGACACAATCTGGTGTCACCTGGGAAAGGAGTCTCACTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CCA 90 bp	CAGGTGACACCAGATTGTGTCAAGTTGACAGCTGAAGCACCCATCCAAAACAGATCAGGATCTTCACAATaGTCTTCAATTGCCTCATCT	+
Preference number: 4 (lower is better) Translates to: QVTPDCVKLTAEAPIQNRSGSSQ*SSIASS Trigger: AGATGAGGCAATTGAAGACCATTGTGAAGATCCTGA...TCTGTTTTGGATGGGTGCTTCAGCTGTCAACTTGACACAATCTGGTGTCACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	CTGCTATCAAACAACTTATCTTTGGTTCTGCTGTGTGCAGATCCAGGCAGTCTTTGTGTGTATTCAGAGTaGGTGACGATGTTCCTTAGA	+
Preference number: 4 (lower is better) Translates to: LLSNNLSLVLLCADPGSLCVYSE*VTMFLR Trigger: TCTAAGGAACATCGTCACTCACTCTGAATACACACA...AAGACTGCCTGGATCTGCACACAGCAGAACCAAAGATAAGTTGTTTGATAGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
CDS-3UTR TCA 90 bp	CACACTTACAACATTGGTAACAAACATAAACTTTGCCCAGCAAGAATTCCTTCTAGTCGAAGCGAGGACTaGCACCTAAAGGCTTTACCG	+
Preference number: 4 (lower is better) Translates to: HTYNIGNKHKLCPARIPSSRSED*HLKALP Trigger: CGGTAAAGCCTTTAGGTGTCAGTCCTCGCTTCGACT...AGAAGGAATTCTTGCTGGGCAAAGTTTATGTTTGTTACCAATGTTGTAAGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	TTCTGCCTGTTTTATGTGGATGGGATAATTTGCTACATTGTTTACATTCAAAGGAGGAACTGTGCCTGCTaGAGGATCTGCCACACTGTC	+
Preference number: 4 (lower is better) Translates to: FCLFYVDGIICYIVYIQRRNCAC*RICHTV Trigger: GACAGTGTGGCAGATCCTTCAGCAGGCACAGTTCCT...CCTTTGAATGTAAACAATGTAGCAAATTATCCCATCCACATAAAACAGGCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CCA 90 bp	CACTCACAGAACTGCCCACCTTCCAACACTATGAGCATCTTAAACAACTGTGACTCAGGATCTTCACAATaGTCTTCAATTGCCTCATCT	+
Preference number: 4 (lower is better) Translates to: HSQNCPPSNTMSILNNCDSGSSQ*SSIASS Trigger: AGATGAGGCAATTGAAGACCATTGTGAAGATCCTGA...GTCACAGTTGTTTAAGATGCTCATAGTGTTGGAAGGTGGGCAGTTCTGTGAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	ATGAGCATCTTAAACAACTGTGACCATGAAGGCTTCACAGCTGTTTCCATTTGGGGGTCCTGTGACTTCTaGAAAATTTCCCACATTGTT	+
Preference number: 4 (lower is better) Translates to: MSILNNCDHEGFTAVSIWGSCDF*KISHIV Trigger: AACAATGTGGGAAATTTTTCAGAAGTCACAGGACCC...CCAAATGGAAACAGCTGTGAAGCCTTCATGGTCACAGTTGTTTAAGATGCTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	GAGGAACCGTGGAGTTTAATTTGGGGTATTTACAAGAGTACAGGCAAGTCATGGAACTTAAGGGTCCTGTaGCTTCTGAAAAATTTCCCA	+
Preference number: 4 (lower is better) Translates to: EEPWSLIWGIYKSTGKSWNLRVL*LLKNFP Trigger: TGGGAAATTTTTCAGAAGTCACAGGACCCTTAAGTT...CCATGACTTGCCTGTACTCTTGTAAATACCCCAAATTAAACTCCACGGTTCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	TTTGGAAATTTTTCCAGTTGGAATTCATTCTCGGAATCTAGGCAAACAATGCTAAGTCGAAGCGAGGACTaGCACCTAAAGGCTTTACCG	+
Preference number: 4 (lower is better) Translates to: FGNFSSWNSFSESRQTMLSRSED*HLKALP Trigger: CGGTAAAGCCTTTAGGTGTCAGTCCTCGCTTCGACT...TAGCATTGTTTGCCTAGATTCCGAGAATGAATTCCAACTGGAAAAATTTCCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	TTTAATTCAGTCCATAAAACAGCACTGACAGCATTCAGGATGGGTCTTCCTACCATGTCTTCTTTCATGTaGTCGAAGGTAAGAGCGATG	+
Preference number: 4 (lower is better) Translates to: FNSVHKTALTAFRMGLPTMSSFM*SKVRAM Trigger: CATCGCTCTTACCTTCGATCACATGAAAGAAGACAT...GGTAGGAAGACCCATCCTGAATGCTGTCAGTGCTGTTTTATGGACTGAATTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	CGCTCAGCTACTTCTGTCCTTTTTAATTCAGTCCATAAAACAGCACTGACAGCAGCTTTCTCCATGAACTaGCTGATGTCTCTTAAAGGA	+
Preference number: 4 (lower is better) Translates to: RSATSVLFNSVHKTALTAAFSMN*LMSLKG Trigger: TCCTTTAAGAGACATCAGTCAGTTCATGGAGAAAGC...TGCTGTCAGTGCTGTTTTATGGACTGAATTAAAAAGGACAGAAGTAGCTGAGCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	CGCTCAGCTACTTCTGTCCTTTTTAATTCAGTCCATAAAACAGCACTGACAGCAATTTTGTCTTCTTTCTaGAGGGAACCGGAAGTTTTC	+
Preference number: 4 (lower is better) Translates to: RSATSVLFNSVHKTALTAILSSF*REPEVF Trigger: GAAAACTTCCGGTTCCCTTCAGAAAGAAGACAAAAT...TGCTGTCAGTGCTGTTTTATGGACTGAATTAAAAAGGACAGAAGTAGCTGAGCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	CAAACAATGCTATCTCAAGGTCTTAACACACCTTACATTCCCATTTTCTCTCCAATTCTTTCATGTAACTaGAGGGCGCTGGGATACCTA	+
Preference number: 4 (lower is better) Translates to: QTMLSQGLNTPYIPIFSPILSCN*RALGYL Trigger: TAGGTATCCCAGCGCCCTTCAGTTACATGAAAGAAT...TGGAGAGAAAATGGGAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	TCTCGGAATCTAGGCAAACAATGCTATCTCAAGGTCTTAACACACCTTACATTCGGGTCCTGTGACTTCTaGAAAATTTCCCACATTGTT	+
Preference number: 4 (lower is better) Translates to: SRNLGKQCYLKVLTHLTFGSCDF*KISHIV Trigger: AACAATGTGGGAAATTTTTCAGAAGTCACAGGACCC...GAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTGCCTAGATTCCGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	AACAACTGTGACCATGAAGGCTTCACAGCTGTTTCCATTTGGAAATTTTTCCAGGCTTTCTCCATGAACTaGCTGATGTCTCTTAAAGGA	+
Preference number: 4 (lower is better) Translates to: NNCDHEGFTAVSIWKFFQAFSMN*LMSLKG Trigger: TCCTTTAAGAGACATCAGTCAGTTCATGGAGAAAGC...CTGGAAAAATTTCCAAATGGAAACAGCTGTGAAGCCTTCATGGTCACAGTTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CCA 90 bp	TGTGTCAAGTTGACAGCTGAAGCACCCATCCAAAACAGAAAGAAGCACAGCACAGAAGTTTTCTCACACTaGTTACCTTCAGAATCATTT	+
Preference number: 4 (lower is better) Translates to: CVKLTAEAPIQNRKKHSTEVFSH*LPSESF Trigger: AAATGATTCTGAAGGTAACCAGTGTGAGAAAACTTC...TGTGCTGTGCTTCTTTCTGTTTTGGATGGGTGCTTCAGCTGTCAACTTGACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	AATCTAGGCAAACAATGCTATCTCAAGGTCTTAACACACCTTACATTCCCATTTATTCTTTCATGTAACTaGAGGGCGCTGGGATACCTA	+
Preference number: 4 (lower is better) Translates to: NLGKQCYLKVLTHLTFPFILSCN*RALGYL Trigger: TAGGTATCCCAGCGCCCTTCAGTTACATGAAAGAAT...AAATGGGAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTGCCTAGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	TTAACACACCTTACATTCCCATTTTCTCTCCAACATGACATTTCATCCATGCTAATTCTTTCATGTAACTaGAGGGCGCTGGGATACCTA	+
Preference number: 4 (lower is better) Translates to: LTHLTFPFSLQHDISSMLILSCN*RALGYL Trigger: TAGGTATCCCAGCGCCCTTCAGTTACATGAAAGAAT...TAGCATGGATGAAATGTCATGTTGGAGAGAAAATGGGAATGTAAGGTGTGTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	TCTCGGAATCTAGGCAAACAATGCTATCTCAAGGTCTTAACACACCTTACATTCAACTTAAGGGTCCTGTaGCTTCTGAAAAATTTCCCA	+
Preference number: 4 (lower is better) Translates to: SRNLGKQCYLKVLTHLTFNLRVL*LLKNFP Trigger: TGGGAAATTTTTCAGAAGTCACAGGACCCTTAAGTT...GAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTGCCTAGATTCCGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	CAAACAATGCTATCTCAAGGTCTTAACACACCTTACATTCCCATTTTCTCTCCAGCTTTCTCCATGAACTaGCTGATGTCTCTTAAAGGA	+
Preference number: 4 (lower is better) Translates to: QTMLSQGLNTPYIPIFSPAFSMN*LMSLKG Trigger: TCCTTTAAGAGACATCAGTCAGTTCATGGAGAAAGC...TGGAGAGAAAATGGGAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
3UTR CAA 72 bp	CAGGAAAGGCTTAACACAGACTTAATCTGTAATTGCTaGTCCTTCCAGAAGCCATCTTTTTCACCTCCTTTT	+
Preference number: 4 (lower is better) Translates to: QERLNTDLICNC*SFQKPSFSPPF Trigger: AAAAGGAGGTGAAAAAGATGGCTTCTGGAAGGACAAGCAATTACAGATTAAGTCTGTGTTAAGCCTTTCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238292.2
CDS-3UTR TCA 90 bp	TTAACACACCTTACATTCCCATTTTCTCTCCAACATGACATTTCATCCATGCTAGGGTCCTGTGACTTCTaGAAAATTTCCCACATTGTT	+
Preference number: 4 (lower is better) Translates to: LTHLTFPFSLQHDISSMLGSCDF*KISHIV Trigger: AACAATGTGGGAAATTTTTCAGAAGTCACAGGACCC...TAGCATGGATGAAATGTCATGTTGGAGAGAAAATGGGAATGTAAGGTGTGTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	CACCTTACATTCCCATTTTCTCTCCAACATGACATTTCATCCATGCTAGTGAAAAACTTAAGGGTCCTGTaGCTTCTGAAAAATTTCCCA	+
Preference number: 4 (lower is better) Translates to: HLTFPFSLQHDISSMLVKNLRVL*LLKNFP Trigger: TGGGAAATTTTTCAGAAGTCACAGGACCCTTAAGTT...TTTCACTAGCATGGATGAAATGTCATGTTGGAGAGAAAATGGGAATGTAAGGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	CACACTTACAACATTGGTAACAAACATAAACTTTGCCCAGCAAGAATTCCTTCTATGTCTTCTTTCATGTaGTCGAAGGTAAGAGCGATG	+
Preference number: 4 (lower is better) Translates to: HTYNIGNKHKLCPARIPSMSSFM*SKVRAM Trigger: CATCGCTCTTACCTTCGATCACATGAAAGAAGACAT...AGAAGGAATTCTTGCTGGGCAAAGTTTATGTTTGTTACCAATGTTGTAAGTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	CCATTTGGAAATTTTTCCAGTTGGAATTCATTCTCGGAATCTAGGCAAACAATGGCTTTCTCCATGAACTaGCTGATGTCTCTTAAAGGA	+
Preference number: 4 (lower is better) Translates to: PFGNFSSWNSFSESRQTMAFSMN*LMSLKG Trigger: TCCTTTAAGAGACATCAGTCAGTTCATGGAGAAAGC...CATTGTTTGCCTAGATTCCGAGAATGAATTCCAACTGGAAAAATTTCCAAATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CCA 90 bp	ATGAGCATCTTAAACAACTGTGACCATGAAGGCTTCACAGCTGTTTCCATTTGGGAAGTTTTCTCACACTaGTTACCTTCAGAATCATTT	+
Preference number: 4 (lower is better) Translates to: MSILNNCDHEGFTAVSIWEVFSH*LPSESF Trigger: AAATGATTCTGAAGGTAACCAGTGTGAGAAAACTTC...CCAAATGGAAACAGCTGTGAAGCCTTCATGGTCACAGTTGTTTAAGATGCTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	AATCTAGGCAAACAATGCTATCTCAAGGTCTTAACACACCTTACATTCCCATTTATTTTGTCTTCTTTCTaGAGGGAACCGGAAGTTTTC	+
Preference number: 4 (lower is better) Translates to: NLGKQCYLKVLTHLTFPFILSSF*REPEVF Trigger: GAAAACTTCCGGTTCCCTTCAGAAAGAAGACAAAAT...AAATGGGAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTGCCTAGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	TTGGAAATTTTTCCAGTTGGAATTCATTCTCGGAATCTAGGCAAACAATGCTATGGGTCCTGTGACTTCTaGAAAATTTCCCACATTGTT	+
Preference number: 4 (lower is better) Translates to: LEIFPVGIHSRNLGKQCYGSCDF*KISHIV Trigger: AACAATGTGGGAAATTTTTCAGAAGTCACAGGACCC...ATAGCATTGTTTGCCTAGATTCCGAGAATGAATTCCAACTGGAAAAATTTCCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	TTGGAAATTTTTCCAGTTGGAATTCATTCTCGGAATCTAGGCAAACAATGCTATATGTCTTCTTTCATGTaGTCGAAGGTAAGAGCGATG	+
Preference number: 4 (lower is better) Translates to: LEIFPVGIHSRNLGKQCYMSSFM*SKVRAM Trigger: CATCGCTCTTACCTTCGATCACATGAAAGAAGACAT...ATAGCATTGTTTGCCTAGATTCCGAGAATGAATTCCAACTGGAAAAATTTCCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	TTGGAAATTTTTCCAGTTGGAATTCATTCTCGGAATCTAGGCAAACAATGCTATGCTTTCTCCATGAACTaGCTGATGTCTCTTAAAGGA	+
Preference number: 4 (lower is better) Translates to: LEIFPVGIHSRNLGKQCYAFSMN*LMSLKG Trigger: TCCTTTAAGAGACATCAGTCAGTTCATGGAGAAAGC...ATAGCATTGTTTGCCTAGATTCCGAGAATGAATTCCAACTGGAAAAATTTCCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	TTTGGAAATTTTTCCAGTTGGAATTCATTCTCGGAATCTAGGCAAACAATGCTAATTTTGTCTTCTTTCTaGAGGGAACCGGAAGTTTTC	+
Preference number: 4 (lower is better) Translates to: FGNFSSWNSFSESRQTMLILSSF*REPEVF Trigger: GAAAACTTCCGGTTCCCTTCAGAAAGAAGACAAAAT...TAGCATTGTTTGCCTAGATTCCGAGAATGAATTCCAACTGGAAAAATTTCCAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR TCA 90 bp	TTCTGCCTGTTTTATGTGGATGGGATAATTTGCTACATTGTTTACATTCAAAGGATTTTGTCTTCTTTCTaGAGGGAACCGGAAGTTTTC	+
Preference number: 4 (lower is better) Translates to: FCLFYVDGIICYIVYIQRILSSF*REPEVF Trigger: GAAAACTTCCGGTTCCCTTCAGAAAGAAGACAAAAT...CCTTTGAATGTAAACAATGTAGCAAATTATCCCATCCACATAAAACAGGCAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CCA 90 bp	TTCTGCCTGTTTTATGTGGATGGGATAATTTGCTACATTGTTTACATTCAAAGGTCAGGATCTTCACAATaGTCTTCAATTGCCTCATCT	+
Preference number: 4 (lower is better) Translates to: FCLFYVDGIICYIVYIQRSGSSQ*SSIASS Trigger: AGATGAGGCAATTGAAGACCATTGTGAAGATCCTGA...CCTTTGAATGTAAACAATGTAGCAAATTATCCCATCCACATAAAACAGGCAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CCA 90 bp	AATCTAGGCAAACAATGCTATCTCAAGGTCTTAACACACCTTACATTCCCATTTGAAGTTTTCTCACACTaGTTACCTTCAGAATCATTT	+
Preference number: 4 (lower is better) Translates to: NLGKQCYLKVLTHLTFPFEVFSH*LPSESF Trigger: AAATGATTCTGAAGGTAACCAGTGTGAGAAAACTTC...AAATGGGAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTGCCTAGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CCA 90 bp	TTCTGCCTGTTTTATGTGGATGGGATAATTTGCTACATTGTTTACATTCAAAGGGAAGTTTTCTCACACTaGTTACCTTCAGAATCATTT	+
Preference number: 4 (lower is better) Translates to: FCLFYVDGIICYIVYIQREVFSH*LPSESF Trigger: AAATGATTCTGAAGGTAACCAGTGTGAGAAAACTTC...CCTTTGAATGTAAACAATGTAGCAAATTATCCCATCCACATAAAACAGGCAGAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CCA 90 bp	TTGGAAATTTTTCCAGTTGGAATTCATTCTCGGAATCTAGGCAAACAATGCTATGAAGTTTTCTCACACTaGTTACCTTCAGAATCATTT	+
Preference number: 4 (lower is better) Translates to: LEIFPVGIHSRNLGKQCYEVFSH*LPSESF Trigger: AAATGATTCTGAAGGTAACCAGTGTGAGAAAACTTC...ATAGCATTGTTTGCCTAGATTCCGAGAATGAATTCCAACTGGAAAAATTTCCAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CAA 90 bp	ATTAAATTCCCACGCTCCTTACACTCACAGAACTGCCCACCTTCCAACACTATGCACAATGGTCTTCAATaGCCTCATCTTCCCATTCAT	+
Preference number: 5 (lower is better) Translates to: IKFPRSLHSQNCPPSNTMHNGLQ*PHLPIH Trigger: ATGAATGGGAAGATGAGGCAATTGAAGACCATTGTG...CATAGTGTTGGAAGGTGGGCAGTTCTGTGAGTGTAAGGAGCGTGGGAATTTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CAA 90 bp	TGTGTCAAGTTGACAGCTGAAGCACCCATCCAAAACAGAAAGAAGCACAGCACACACAATGGTCTTCAATaGCCTCATCTTCCCATTCAT	+
Preference number: 5 (lower is better) Translates to: CVKLTAEAPIQNRKKHSTHNGLQ*PHLPIH Trigger: ATGAATGGGAAGATGAGGCAATTGAAGACCATTGTG...TGTGCTGTGCTTCTTTCTGTTTTGGATGGGTGCTTCAGCTGTCAACTTGACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CAA 90 bp	CAGGTGACACCAGATTGTGTCAAGTTGACAGCTGAAGCACCCATCCAAAACAGAATTCTTTCATGTAATTaGAGGGCCCTGCTATATCTA	+
Preference number: 5 (lower is better) Translates to: QVTPDCVKLTAEAPIQNRILSCN*RALLYL Trigger: TAGATATAGCAGGGCCCTCAAATTACATGAAAGAAT...TCTGTTTTGGATGGGTGCTTCAGCTGTCAACTTGACACAATCTGGTGTCACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CAA 90 bp	GACAGCAAGGAATCTTTGCGCTCAGCTACTTCTGTCCTTTTTAATTCAGTCCATCACAATGGTCTTCAATaGCCTCATCTTCCCATTCAT	+
Preference number: 5 (lower is better) Translates to: DSKESLRSATSVLFNSVHHNGLQ*PHLPIH Trigger: ATGAATGGGAAGATGAGGCAATTGAAGACCATTGTG...ATGGACTGAATTAAAAAGGACAGAAGTAGCTGAGCGCAAAGATTCCTTGCTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CAA 90 bp	TTTAATTCAGTCCATAAAACAGCACTGACAGCATTCAGGATGGGTCTTCCTACCCACAATGGTCTTCAATaGCCTCATCTTCCCATTCAT	+
Preference number: 5 (lower is better) Translates to: FNSVHKTALTAFRMGLPTHNGLQ*PHLPIH Trigger: ATGAATGGGAAGATGAGGCAATTGAAGACCATTGTG...GGTAGGAAGACCCATCCTGAATGCTGTCAGTGCTGTTTTATGGACTGAATTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CAA 90 bp	ATTAAATTCCCACGCTCCTTACACTCACAGAACTGCCCACCTTCCAACACTATGATTCTTTCATGTAATTaGAGGGCCCTGCTATATCTA	+
Preference number: 5 (lower is better) Translates to: IKFPRSLHSQNCPPSNTMILSCN*RALLYL Trigger: TAGATATAGCAGGGCCCTCAAATTACATGAAAGAAT...CATAGTGTTGGAAGGTGGGCAGTTCTGTGAGTGTAAGGAGCGTGGGAATTTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS TCA 90 bp	GGCTTCTCTTCATATTCCTCGTGTTCATACTGTGTGTATTCAGAGTaGGTGACGATGTTCCTTAGATTTACTTCAGGATCTTCACAATGG	+
Preference number: 5 (lower is better) Translates to: GFSSYSSCSYCVYSE*VTMFLRFTSGSSQW Trigger: CCATTGTGAAGATCCTGAAGTAAATCTAAGGAACATCGTCACTCACTCTGAATACACACAGTATGAACACGAGGAATATGAAGAGAAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000080987.7 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238460.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CAA 90 bp	ATGAGCATCTTAAACAACTGTGACCATGAAGGCTTCACAGCTGTTTCCATTTGGGAAGGTAATTGTAACTaGAAAAGGCTTTGCCACAGT	+
Preference number: 5 (lower is better) Translates to: MSILNNCDHEGFTAVSIWEGNCN*KRLCHS Trigger: ACTGTGGCAAAGCCTTTTCAAGTTACAATTACCTTC...CCAAATGGAAACAGCTGTGAAGCCTTCATGGTCACAGTTGTTTAAGATGCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CAA 90 bp	CGCTCAGCTACTTCTGTCCTTTTTAATTCAGTCCATAAAACAGCACTGACAGCAGAAGGTAATTGTAACTaGAAAAGGCTTTGCCACAGT	+
Preference number: 5 (lower is better) Translates to: RSATSVLFNSVHKTALTAEGNCN*KRLCHS Trigger: ACTGTGGCAAAGCCTTTTCAAGTTACAATTACCTTC...TGCTGTCAGTGCTGTTTTATGGACTGAATTAAAAAGGACAGAAGTAGCTGAGCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CAA 90 bp	CAAACAATGCTATCTCAAGGTCTTAACACACCTTACATTCCCATTTTCTCTCCACACAATGGTCTTCAATaGCCTCATCTTCCCATTCAT	+
Preference number: 5 (lower is better) Translates to: QTMLSQGLNTPYIPIFSPHNGLQ*PHLPIH Trigger: ATGAATGGGAAGATGAGGCAATTGAAGACCATTGTG...TGGAGAGAAAATGGGAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CAA 90 bp	GACAGCAAGGAATCTTTGCGCTCAGCTACTTCTGTCCTTTTTAATTCAGTCCATATTCTTTCATGTAATTaGAGGGCCCTGCTATATCTA	+
Preference number: 5 (lower is better) Translates to: DSKESLRSATSVLFNSVHILSCN*RALLYL Trigger: TAGATATAGCAGGGCCCTCAAATTACATGAAAGAAT...ATGGACTGAATTAAAAAGGACAGAAGTAGCTGAGCGCAAAGATTCCTTGCTGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000238292.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CAA 90 bp	TCTCGGAATCTAGGCAAACAATGCTATCTCAAGGTCTTAACACACCTTACATTCGAAGGTAATTGTAACTaGAAAAGGCTTTGCCACAGT	+
Preference number: 5 (lower is better) Translates to: SRNLGKQCYLKVLTHLTFEGNCN*KRLCHS Trigger: ACTGTGGCAAAGCCTTTTCAAGTTACAATTACCTTC...GAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTGCCTAGATTCCGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS TCA 90 bp	TCTCTTCATATTCCTCGTGTTCATACTGTGTGTATTCAGAGTGAGTaGCGATGTTCCTTAGATTTACTTCAGGATCTTCACAATGGTCTT	+
Preference number: 5 (lower is better) Translates to: SLHIPRVHTVCIQSE*RCSLDLLQDLHNGL Trigger: AAGACCATTGTGAAGATCCTGAAGTAAATCTAAGGAACATCGTCACTCACTCTGAATACACACAGTATGAACACGAGGAATATGAAGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000080987.7 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238460.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CAA 90 bp	CACCTTACATTCCCATTTTCTCTCCAACATGACATTTCATCCATGCTAGTGAAAGAAGGTAATTGTAACTaGAAAAGGCTTTGCCACAGT	+
Preference number: 5 (lower is better) Translates to: HLTFPFSLQHDISSMLVKEGNCN*KRLCHS Trigger: ACTGTGGCAAAGCCTTTTCAAGTTACAATTACCTTC...TTTCACTAGCATGGATGAAATGTCATGTTGGAGAGAAAATGGGAATGTAAGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CAA 90 bp	CTAGGCAAACAATGCTATCTCAAGGTCTTAACACACCTTACATTCCCATTTTCTATTCTTTCATGTAATTaGAGGGCCCTGCTATATCTA	+
Preference number: 5 (lower is better) Translates to: LGKQCYLKVLTHLTFPFSILSCN*RALLYL Trigger: TAGATATAGCAGGGCCCTCAAATTACATGAAAGAAT...AGAAAATGGGAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTGCCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CAA 90 bp	CAAACAATGCTATCTCAAGGTCTTAACACACCTTACATTCCCATTTTCTCTCCAATTCTTTCATGTAATTaGAGGGCCCTGCTATATCTA	+
Preference number: 5 (lower is better) Translates to: QTMLSQGLNTPYIPIFSPILSCN*RALLYL Trigger: TAGATATAGCAGGGCCCTCAAATTACATGAAAGAAT...TGGAGAGAAAATGGGAATGTAAGGTGTGTTAAGACCTTGAGATAGCATTGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS-3UTR CAA 90 bp	CCATTTGGAAATTTTTCCAGTTGGAATTCATTCTCGGAATCTAGGCAAACAATGGAAGGTAATTGTAACTaGAAAAGGCTTTGCCACAGT	+
Preference number: 5 (lower is better) Translates to: PFGNFSSWNSFSESRQTMEGNCN*KRLCHS Trigger: ACTGTGGCAAAGCCTTTTCAAGTTACAATTACCTTC...CATTGTTTGCCTAGATTCCGAGAATGAATTCCAACTGGAAAAATTTCCAAATGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS CCA 72 bp	AAGGCCTTCAACACTTGTGAGAAAATTAGAATCAGGTaGCTTCTCTTCATATTCCTCGTGTTCATACTGTGT	+
Preference number: 6 (lower is better) Translates to: KAFNTCEKIRIR*LLFIFLVFILC Trigger: ACACAGTATGAACACGAGGAATATGAAGAGAAGCCACCTGATTCTAATTTTCTCACAAGTGTTGAAGGCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000080987.7 ENSMUST00000238201.2 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238460.2 ENSMUST00000238657.2 ENSMUST00000238753.2
CDS CCA 72 bp	ACGATGTTCCTTAGATTTACTTCAGGATCTTCACAATaGTCTTCAATTGCCTCATCTTCCCATTCATATCCT	+
Preference number: 6 (lower is better) Translates to: TMFLRFTSGSSQ*SSIASSSHSYP Trigger: AGGATATGAATGGGAAGATGAGGCAATTGAAGACCATTGTGAAGATCCTGAAGTAAATCTAAGGAACATCGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000080987.7 ENSMUST00000238292.2 ENSMUST00000238408.2 ENSMUST00000238418.2 ENSMUST00000238460.2 ENSMUST00000238657.2 ENSMUST00000238753.2

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu