Pregenerated sensors for ZFP868 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060427Ensembl transcript IDs: ENSMUST00000074982.7, ENSMUST00000121886.8
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTTGGTTATAGGGCTCTGGAGTTAAATTGCTGTGGCTCACAGCCTCTCTTTTCTAATTTGTATGGAAGTTaGAGGGCAGAAGATACCATC | + |
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Preference number: 2 (lower is better) Translates to: LGYRALELNCCGSQPLFSNLYGS*RAEDTI Trigger: GATGGTATCTTCTGCCCTTCAACTTCCATACAAATT...AGAAAAGAGAGGCTGTGAGCCACAGCAATTTAACTCCAGAGCCCTATAACCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121886.8 |
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| 3UTR-3UTR CCA 90 bp | GAATACATTCCACAGAATAGAAGTAGATTCAAGCATGTGTCTCAAGAACACTGTGGAGTTAAATTGCTGTaGCTCACAGCCTCTCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: EYIPQNRSRFKHVSQEHCGVKLL*LTASLF Trigger: GAAAAGAGAGGCTGTGAGCCACAGCAATTTAACTCC...ACAGTGTTCTTGAGACACATGCTTGAATCTACTTCTATTCTGTGGAATGTATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121886.8 |
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| 3UTR GCA 72 bp | GCTAGCCTTCTTGGTTATAGGGCTCTGGAGTTAAATTaGTGTGGCTCACAGCCTCTCTTTTCTGGCCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: ASLLGYRALELN*CGSQPLFSGLS Trigger: AGAAAGGCCAGAAAAGAGAGGCTGTGAGCCACAGCAATTTAACTCCAGAGCCCTATAACCAAGAAGGCTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121886.8 |
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| 3UTR TCA 72 bp | TGGCCTTTCTCCTTCATTACTTCTCCCTCAGCTACATaGTCTCCACCAATTTGTATGGAAGTTGAAGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: WPFSFITSPSAT*SPPICMEVEGQ Trigger: CTGCCCTTCAACTTCCATACAAATTGGTGGAGATCATGTAGCTGAGGGAGAAGTAATGAAGGAGAAAGGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121886.8 |
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| 3UTR TCA 72 bp | CCTAGGTTGGCTAGAAGAGGTTCTATAACCTCAAGATaGTCCATCAGAGTCCATGTGCTAGCCTTCTTGGTT | + |
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Preference number: 3 (lower is better) Translates to: PRLARRGSITSR*SIRVHVLAFLV Trigger: AACCAAGAAGGCTAGCACATGGACTCTGATGGATCATCTTGAGGTTATAGAACCTCTTCTAGCCAACCTAGG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121886.8 |
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| 3UTR CCA 72 bp | CAAAGGGGAGACCTATCTTCTAGTGATTGTAGGGAATaGTTTCCTAGGTTGGCTAGAAGAGGTTCTATAACC | + |
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Preference number: 3 (lower is better) Translates to: QRGDLSSSDCRE*FPRLARRGSIT Trigger: GGTTATAGAACCTCTTCTAGCCAACCTAGGAAACCATTCCCTACAATCACTAGAAGATAGGTCTCCCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121886.8 |
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| 3UTR TCA 72 bp | CTCAGCTACATGATCTCCACCAATTTGTATGGAAGTTaGAGGGCAGAAGATACCATCTTTGGTAACTACTTC | + |
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Preference number: 3 (lower is better) Translates to: LSYMISTNLYGS*RAEDTIFGNYF Trigger: GAAGTAGTTACCAAAGATGGTATCTTCTGCCCTTCAACTTCCATACAAATTGGTGGAGATCATGTAGCTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121886.8 |
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| 3UTR-3UTR CAA 90 bp | AGTAACAGCATAGAATACATTCCACAGAATAGAAGTAGATTCAAGCATGTGTCTCAATTTGTATGGAAGTaGAAGGGCAGAAGATACCAT | + |
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Preference number: 3 (lower is better) Translates to: SNSIEYIPQNRSRFKHVSQFVWK*KGRRYH Trigger: ATGGTATCTTCTGCCCTTCAACTTCCATACAAATTG...AGACACATGCTTGAATCTACTTCTATTCTGTGGAATGTATTCTATGCTGTTACT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121886.8 |
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| CDS-3UTR TCA 90 bp | TTTCACTTAAAATGGCAAGAGTTCATTCAAAGGGGAGACCTATCTTCTAGTGATAGGAACTCTGCCGGCTaGAGGATCTGCCACACTGTC | + |
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Preference number: 4 (lower is better) Translates to: FHLKWQEFIQRGDLSSSDRNSAG*RICHTV Trigger: GACAGTGTGGCAGATCCTTCAGCCGGCAGAGTTCCT...ATCACTAGAAGATAGGTCTCCCCTTTGAATGAACTCTTGCCATTTTAAGTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121886.8 |
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| CDS-3UTR CCA 90 bp | AGTCCATGTGCTAGCCTTCTTGGTTATAGGGCTCTGGAGTTAAATTGCTGTGGCTGGTCTTCAATTTTCTaGTCTTCCCATTCACATCCT | + |
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Preference number: 4 (lower is better) Translates to: SPCASLLGYRALELNCCGWSSIF*SSHSHP Trigger: AGGATGTGAATGGGAAGACCAGAAAATTGAAGACCA...GCCACAGCAATTTAACTCCAGAGCCCTATAACCAAGAAGGCTAGCACATGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121886.8 |
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| CDS-3UTR TCA 90 bp | CTTGGTTATAGGGCTCTGGAGTTAAATTGCTGTGGCTCACAGCCTCTCTTTTCTGTAAAGAGGGATAAATaGAGGACTTACCACACTCTT | + |
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Preference number: 4 (lower is better) Translates to: LGYRALELNCCGSQPLFSVKRDK*RTYHTL Trigger: AAGAGTGTGGTAAGTCCTTCATTTATCCCTCTTTAC...AGAAAAGAGAGGCTGTGAGCCACAGCAATTTAACTCCAGAGCCCTATAACCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121886.8 |
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| CDS-3UTR CCA 90 bp | TTCAAGCATGTGTCTCAAGAACACTGTTTTGAGTCCATGGGTTTTCACTTAAAAAAATCCCACTCATCCTaGGTGAAGTGCACCACCAGA | + |
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Preference number: 4 (lower is better) Translates to: FKHVSQEHCFESMGFHLKKSHSS*VKCTTR Trigger: TCTGGTGGTGCACTTCACCCAGGATGAGTGGGATTT...TTTTAAGTGAAAACCCATGGACTCAAAACAGTGTTCTTGAGACACATGCTTGAA 42% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000121886.8 |
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| CDS-3UTR TCA 90 bp | GAATACATTCCACAGAATAGAAGTAGATTCAAGCATGTGTCTCAAGAACACTGTTTCCACAGCATGAACTaGCTGATGTCTCTTAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: EYIPQNRSRFKHVSQEHCFHSMN*LMSLKG Trigger: TCCTTTAAGAGACATCAGTCAGTTCATGCTGTGGAA...ACAGTGTTCTTGAGACACATGCTTGAATCTACTTCTATTCTGTGGAATGTATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121886.8 |
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| CDS-3UTR TCA 90 bp | TTCAAGCATGTGTCTCAAGAACACTGTTTTGAGTCCATGGGTTTTCACTTAAAAATGAATTCTTTCATGTaGTTGAAGGGCGTTGAGACA | + |
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Preference number: 4 (lower is better) Translates to: FKHVSQEHCFESMGFHLKMNSFM*LKGVET Trigger: TGTCTCAACGCCCTTCAATCACATGAAAGAATTCAT...TTTTAAGTGAAAACCCATGGACTCAAAACAGTGTTCTTGAGACACATGCTTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000121886.8 |
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| CDS-3UTR CCA 90 bp | AGTAACAGCATAGAATACATTCCACAGAATAGAAGTAGATTCAAGCATGTGTCTAAAATTAGAATCAGGTaGCTTCTCTTCATATTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SNSIEYIPQNRSRFKHVSKIRIR*LLFIFL Trigger: GAGGAATATGAAGAGAAGCCACCTGATTCTAATTTT...AGACACATGCTTGAATCTACTTCTATTCTGTGGAATGTATTCTATGCTGTTACT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121886.8 |
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| CDS CCA 90 bp | AGTTTCCATGTAGCCTTCAACACTTGTGAGAAAATTAGAATCAGGTaGCTTCTCTTCATATTCCTCGTGTTCATACTGTGTGTATTCAGA | + |
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Preference number: 5 (lower is better) Translates to: SFHVAFNTCEKIRIR*LLFIFLVFILCVFR Trigger: TCTGAATACACACAGTATGAACACGAGGAATATGAAGAGAAGCCACCTGATTCTAATTTTCTCACAAGTGTTGAAGGCTACATGGAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074982.7 ENSMUST00000121886.8 |
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| CDS-3UTR CAA 90 bp | TTCAAGCATGTGTCTCAAGAACACTGTTTTGAGTCCATGGGTTTTCACTTAAAAGGCCTTAGTACACTGTaGACATTTATACGGTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: FKHVSQEHCFESMGFHLKGLSTL*TFIRSF Trigger: GAAAGACCGTATAAATGTCAACAGTGTACTAAGGCC...TTTTAAGTGAAAACCCATGGACTCAAAACAGTGTTCTTGAGACACATGCTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000121886.8 |
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| CDS TCA 90 bp | TCTCTTCATATTCCTCGTGTTCATACTGTGTGTATTCAGAGTGAGTaGCGATGTTCCTTAGATTTATTTCAGGCTCTTCAAAATGGTCTT | + |
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Preference number: 5 (lower is better) Translates to: SLHIPRVHTVCIQSE*RCSLDLFQALQNGL Trigger: AAGACCATTTTGAAGAGCCTGAAATAAATCTAAGGAACATCGTCACTCACTCTGAATACACACAGTATGAACACGAGGAATATGAAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074982.7 ENSMUST00000121886.8 |
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| CDS TCA 72 bp | AAGTGCACCACCAGATCCTCAAAGCTCACCAAACCCTaGTCAGGCCTGGAGAGTCCAACAATGGCTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: KCTTRSSKLTKP*SGLESPTMAVS Trigger: GGAGACAGCCATTGTTGGACTCTCCAGGCCTGATCAGGGTTTGGTGAGCTTTGAGGATCTGGTGGTGCACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074982.7 ENSMUST00000121886.8 |
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| CDS CCA 72 bp | GTAGCCTTCAACACTTGTGAGAAAATTAGAATCAGGTaGCTTCTCTTCATATTCCTCGTGTTCATACTGTGT | + |
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Preference number: 6 (lower is better) Translates to: VAFNTCEKIRIR*LLFIFLVFILC Trigger: ACACAGTATGAACACGAGGAATATGAAGAGAAGCCACCTGATTCTAATTTTCTCACAAGTGTTGAAGGCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000074982.7 ENSMUST00000121886.8 |
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| CDS CAA 72 bp | ACCACACTGGTTACATTCATAACTTTTTCGTACAGGTaGGCTTCCTACACACTCTTTGTACTCATAGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: TTLVTFITFSYR*ASYTLFVLIVV Trigger: CACAACTATGAGTACAAAGAGTGTGTAGGAAGCCAACCTGTACGAAAAAGTTATGAATGTAACCAGTGTGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074982.7 ENSMUST00000121886.8 |
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| CDS TCA 72 bp | ATTCCTCGTGTTCATACTGTGTGTATTCAGAGTGAGTaGCGATGTTCCTTAGATTTATTTCAGGCTCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: IPRVHTVCIQSE*RCSLDLFQALQ Trigger: TTGAAGAGCCTGAAATAAATCTAAGGAACATCGTCACTCACTCTGAATACACACAGTATGAACACGAGGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000074982.7 ENSMUST00000121886.8 |
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| CDS CCA 72 bp | TTTATTTCAGGCTCTTCAAAATGGTCTTCAATTTTCTaGTCTTCCCATTCACATCCTGTATCAGTGAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: FISGSSKWSSIF*SSHSHPVSVKF Trigger: GAACTTCACTGATACAGGATGTGAATGGGAAGACCAGAAAATTGAAGACCATTTTGAAGAGCCTGAAATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000074982.7 ENSMUST00000121886.8 |
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