RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP865 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000074405

Ensembl transcript IDs: ENSMUST00000076251.7, ENSMUST00000085427.6

Found 364 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGCCCAGGAGAGGTCGGAGGTGGTGATGGCTGCAGCAGCTGCGGGTaGTGTGGTAGGCAAGCCTTTCGCCTGCAGGTTTTGTGCCAAGCC +
Preference number: 1 (lower is better)
Translates to: GPGEVGGGDGCSSCG*CGRQAFRLQVLCQA
Trigger: GGCTTGGCACAAAACCTGCAGGCGAAAGGCTTGCCTACCACAGCACCCGCAGCTGCTGCAGCCATCACCACCTCCGACCTCTCCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR GCA 90 bp GCCAAACTCAAGGGTGGCCCAGGAGAGGTCGGAGGTGGTGATGGCTaGAGCAGCTGCGGGTGCTGTGGTAGGCAAGCCTTTCGCCTGCAG +
Preference number: 1 (lower is better)
Translates to: AKLKGGPGEVGGGDG*SSCGCCGRQAFRLQ
Trigger: CTGCAGGCGAAAGGCTTGCCTACCACAGCACCCGCAGCTGCTGCAGCCATCACCACCTCCGACCTCTCCTGGGCCACCCTTGAGTTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR GCA 90 bp AGCTGCGGGTGCTGTGGTAGGCAAGCCTTTCGCCTGCAGGTTTTGTaGCAAGCCCTTCCGACGCTCCTCAGATATGCGAGACCACGAGCG +
Preference number: 1 (lower is better)
Translates to: SCGCCGRQAFRLQVL*QALPTLLRYARPRA
Trigger: CGCTCGTGGTCTCGCATATCTGAGGAGCGTCGGAAGGGCTTGGCACAAAACCTGCAGGCGAAAGGCTTGCCTACCACAGCACCCGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR GCA 90 bp ATGGCTGCAGCAGCTGCGGGTGCTGTGGTAGGCAAGCCTTTCGCCTaGAGGTTTTGTGCCAAGCCCTTCCGACGCTCCTCAGATATGCGA +
Preference number: 1 (lower is better)
Translates to: MAAAAAGAVVGKPFA*RFCAKPFRRSSDMR
Trigger: TCGCATATCTGAGGAGCGTCGGAAGGGCTTGGCACAAAACCTGCAGGCGAAAGGCTTGCCTACCACAGCACCCGCAGCTGCTGCAGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR GCA 90 bp GCCGTTGTCATGTGTGTGGCCACAGCTGTCCAGGTCCTGCTAGCCTaGGTGCCCATTACAGCTTGCACACAGGAGAACGGCCTTACCGCT +
Preference number: 1 (lower is better)
Translates to: AVVMCVATAVQVLLA*VPITACTQENGLTA
Trigger: AGCGGTAAGGCCGTTCTCCTGTGTGCAAGCTGTAATGGGCACGCAGGCTAGCAGGACCTGGACAGCTGTGGCCACACACATGACAACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR GCA 90 bp CATTACAGCTTGCACACAGGAGAACGGCCTTACCGCTGTTCCCTCTaGCCACGGGCTTTTAAGGCCTTGGCACCTCTGCTCCGGCACCAA +
Preference number: 1 (lower is better)
Translates to: HYSLHTGERPYRCSL*PRAFKALAPLLRHQ
Trigger: TTGGTGCCGGAGCAGAGGTGCCAAGGCCTTAAAAGCCCGTGGGCAGAGGGAACAGCGGTAAGGCCGTTCTCCTGTGTGCAAGCTGTAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR TCA 90 bp CTGAGAGCATCATGGAAGGGAGTCTCGGGGTCTCAAATCAGTTCCTaGGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGGACA +
Preference number: 1 (lower is better)
Translates to: LRASWKGVSGSQISS*EGDFPVSLRLMPGT
Trigger: TGTCCCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTGATTTGAGACCCCGAGACTCCCTTCCATGATGCTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
3UTR GCA 90 bp CACCACCTCTGGTCCAATGAAATGTTTTGCCTACTTCAACTGGATTaGACTGGTCCTGGGATGCCTACCCTCCAGTGCAGAAGATGCCCA +
Preference number: 1 (lower is better)
Translates to: HHLWSNEMFCLLQLD*TGPGMPTLQCRRCP
Trigger: TGGGCATCTTCTGCACTGGAGGGTAGGCATCCCAGGACCAGTGCAATCCAGTTGAAGTAGGCAAAACATTTCATTGGACCAGAGGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CCA 90 bp TTGACCAGTAGGCTGGAAGCTAGGACATATCGTAGGAGAGGTGGGTaGGCAAATAGAGGCAGAGGCCAAGGAGAAATCATGAGCAGTTGG +
Preference number: 1 (lower is better)
Translates to: LTSRLEARTYRRRGG*ANRGRGQGEIMSSW
Trigger: CCAACTGCTCATGATTTCTCCTTGGCCTCTGCCTCTATTTGCCCACCCACCTCTCCTACGATATGTCCTAGCTTCCAGCCTACTGGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CCA 90 bp TCAGAGGGCATCTCAGGAAGTCAGTCAGTCTGTCTTTCCACCCTGTaGGTCCCAGGGATCATACTCAGGTCGTCAGATTTGGTAAGTGTC +
Preference number: 1 (lower is better)
Translates to: SEGISGSQSVCLSTL*VPGIILRSSDLVSV
Trigger: GACACTTACCAAATCTGACGACCTGAGTATGATCCCTGGGACCCACAGGGTGGAAAGACAGACTGACTGACTTCCTGAGATGCCCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CCA 90 bp CCTCCAGTGCAGAAGATGCCCACCAAGTCATCTCTAAAGGGATGCTaGGATACCTTCCCCTCAAAACCGAGAGTACCTAAACCACATCTC +
Preference number: 1 (lower is better)
Translates to: PPVQKMPTKSSLKGC*DTFPSKPRVPKPHL
Trigger: GAGATGTGGTTTAGGTACTCTCGGTTTTGAGGGGAAGGTATCCCAGCATCCCTTTAGAGATGACTTGGTGGGCATCTTCTGCACTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR TCA 90 bp AAAAAGGGAACCTGGTTCTGGTCTCCCAGAAACCCATGCTACACTTaGGACTCAGGAAAGAGGTACTTGGGGTCTGTGGGTACCCAGATA +
Preference number: 1 (lower is better)
Translates to: KKGTWFWSPRNPCYT*DSGKRYLGSVGTQI
Trigger: TATCTGGGTACCCACAGACCCCAAGTACCTCTTTCCTGAGTCTCAAGTGTAGCATGGGTTTCTGGGAGACCAGAACCAGGTTCCCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR TCA 90 bp CCAGGCTGGAAAGCAAGACTTTCTGTACCACCACCTCTGGTCCAATaGAATGTTTTGCCTACTTCAACTGGATTGCACTGGTCCTGGGAT +
Preference number: 1 (lower is better)
Translates to: PGWKARLSVPPPLVQ*NVLPTSTGLHWSWD
Trigger: ATCCCAGGACCAGTGCAATCCAGTTGAAGTAGGCAAAACATTTCATTGGACCAGAGGTGGTGGTACAGAAAGTCTTGCTTTCCAGCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR GCA 90 bp AAGCAAGACTTTCTGTACCACCACCTCTGGTCCAATGAAATGTTTTaGCTACTTCAACTGGATTGCACTGGTCCTGGGATGCCTACCCTC +
Preference number: 1 (lower is better)
Translates to: KQDFLYHHLWSNEMF*LLQLDCTGPGMPTL
Trigger: GAGGGTAGGCATCCCAGGACCAGTGCAATCCAGTTGAAGTAGGCAAAACATTTCATTGGACCAGAGGTGGTGGTACAGAAAGTCTTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CCA 90 bp TCTGCAGACTGTGTTAAGTTCCTCAGGTATGCTCTCCCAGCCTACTaGAGTGTGAATGTCATGTCCGATCAATTCATCAGTCTCCCTAGC +
Preference number: 1 (lower is better)
Translates to: SADCVKFLRYALPAY*SVNVMSDQFISLPS
Trigger: GCTAGGGAGACTGATGAATTGATCGGACATGACATTCACACTCCAGTAGGCTGGGAGAGCATACCTGAGGAACTTAACACAGTCTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
3UTR CCA 90 bp AGACCAGACCAGGCTGGAAAGCAAGACTTTCTGTACCACCACCTCTaGTCCAATGAAATGTTTTGCCTACTTCAACTGGATTGCACTGGT +
Preference number: 1 (lower is better)
Translates to: RPDQAGKQDFLYHHL*SNEMFCLLQLDCTG
Trigger: ACCAGTGCAATCCAGTTGAAGTAGGCAAAACATTTCATTGGACCAGAGGTGGTGGTACAGAAAGTCTTGCTTTCCAGCCTGGTCTGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CCA 90 bp TTATTTTTCATTTATTATGTGAGGAGAGGGTGTGAGTGTGTGCCATaGCACAGGAATTTGGAGGTCAGAGGGCATCTCAGGAAGTCAGTC +
Preference number: 1 (lower is better)
Translates to: LFFIYYVRRGCECVP*HRNLEVRGHLRKSV
Trigger: GACTGACTTCCTGAGATGCCCTCTGACCTCCAAATTCCTGTGCCATGGCACACACTCACACCCTCTCCTCACATAATAAATGAAAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CCA 90 bp TCTCTGGGTAGTTATCCATTATCTGGAATGGTGAGTGACCAGGCTTaGGCTGTTTGGAGATGTCTATTTGGTTGTGTTGTAAGAAGTTTT +
Preference number: 1 (lower is better)
Translates to: SLGSYPLSGMVSDQA*AVWRCLFGCVVRSF
Trigger: AAAACTTCTTACAACACAACCAAATAGACATCTCCAAACAGCCCAAGCCTGGTCACTCACCATTCCAGATAATGGATAACTACCCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR TCA 90 bp GAGATGTCTATTTGGTTGTGTTGTAAGAAGTTTTGTGCAATGAGGTaGTGTAGGAGGTTGGTGTACTTACTCAGAAGGGTCCCTAATTTT +
Preference number: 1 (lower is better)
Translates to: EMSIWLCCKKFCAMR*CRRLVYLLRRVPNF
Trigger: AAAATTAGGGACCCTTCTGAGTAAGTACACCAACCTCCTACATCACCTCATTGCACAAAACTTCTTACAACACAACCAAATAGACATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CAA 90 bp GGCCACAGCTGTCCAGGTCCTGCTAGCCTGCGTGCCCATTACAGCTaGCACACAGGAGAACGGCCTTACCGCTGTTCCCTCTGCCCACGG +
Preference number: 2 (lower is better)
Translates to: GHSCPGPASLRAHYS*HTGERPYRCSLCPR
Trigger: CCGTGGGCAGAGGGAACAGCGGTAAGGCCGTTCTCCTGTGTGCAAGCTGTAATGGGCACGCAGGCTAGCAGGACCTGGACAGCTGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR TCA 90 bp CTAGCCGTTGTCATGTGTGTGGCCACAGCTGTCCAGGTCCTGCTAGCCTGCGTGGAGGCAGGAGGATCATaGGGTCCAGACCAGACCAGG +
Preference number: 2 (lower is better)
Translates to: LAVVMCVATAVQVLLACVEAGGS*GPDQTR
Trigger: CCTGGTCTGGTCTGGACCTCATGATCCTCCTGCCTC...CACGCAGGCTAGCAGGACCTGGACAGCTGTGGCCACACACATGACAACGGCTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR GCA 90 bp CTAGCCGTTGTCATGTGTGTGGCCACAGCTGTCCAGGTCCTGCTAGCCTGCGTGGATGGCTGCAGCAGCTaGGGGTGCTGTGGTAGGCAA +
Preference number: 2 (lower is better)
Translates to: LAVVMCVATAVQVLLACVDGCSS*GCCGRQ
Trigger: TTGCCTACCACAGCACCCGCAGCTGCTGCAGCCATC...CACGCAGGCTAGCAGGACCTGGACAGCTGTGGCCACACACATGACAACGGCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CAA 90 bp AGCAGCTGCGGGTGCTGTGGTAGGCAAGCCTTTCGCCTGCAGGTTTaGTGCCAAGCCCTTCCGACGCTCCTCAGATATGCGAGACCACGA +
Preference number: 2 (lower is better)
Translates to: SSCGCCGRQAFRLQV*CQALPTLLRYARPR
Trigger: TCGTGGTCTCGCATATCTGAGGAGCGTCGGAAGGGCTTGGCACAAAACCTGCAGGCGAAAGGCTTGCCTACCACAGCACCCGCAGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR CCA 90 bp CTGGTCCTGGGATGCCTACCCTCCAGTGCAGAAGATGCCCACCAAGTCATCTCTGGAGGCAGAGGCAGGTaGATCTCTGAGCTCGAGGCC +
Preference number: 2 (lower is better)
Translates to: LVLGCLPSSAEDAHQVISGGRGR*ISELEA
Trigger: GGCCTCGAGCTCAGAGATCCACCTGCCTCTGCCTCC...AGAGATGACTTGGTGGGCATCTTCTGCACTGGAGGGTAGGCATCCCAGGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR CCA 90 bp CAAGCCCTTCCGACGCTCCTCAGATATGCGAGACCACGAGCGGGTGCATACAGGCCGGTGTTTCCATGGTaGCTGAGAGCATCATGGAAG +
Preference number: 2 (lower is better)
Translates to: QALPTLLRYARPRAGAYRPVFPW*LRASWK
Trigger: CTTCCATGATGCTCTCAGCCACCATGGAAACACCGG...CCTGTATGCACCCGCTCGTGGTCTCGCATATCTGAGGAGCGTCGGAAGGGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR CCA 90 bp CTAGCCTGCGTGCCCATTACAGCTTGCACACAGGAGAACGGCCTTACCGCTGTTGTCCTCTGTGCTGAGTaGTCATGCCCGCATCCACAC +
Preference number: 2 (lower is better)
Translates to: LACVPITACTQENGLTAVVLCAE*SCPHPH
Trigger: GTGTGGATGCGGGCATGACCACTCAGCACAGAGGAC...AACAGCGGTAAGGCCGTTCTCCTGTGTGCAAGCTGTAATGGGCACGCAGGCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR TCA 90 bp CTAGCCTGCGTGCCCATTACAGCTTGCACACAGGAGAACGGCCTTACCGCTGTTCAGTACACTAGAGGCTaGGGCAGGAGGATCATGAGG +
Preference number: 2 (lower is better)
Translates to: LACVPITACTQENGLTAVQYTRG*GRRIMR
Trigger: CCTCATGATCCTCCTGCCTCAGCCTCTAGTGTACTG...AACAGCGGTAAGGCCGTTCTCCTGTGTGCAAGCTGTAATGGGCACGCAGGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR GCA 90 bp CTAGCCGTTGTCATGTGTGTGGCCACAGCTGTCCAGGTCCTGCTAGCCTGCGTGCTACTTCAACTGGATTaGACTGGTCCTGGGATGCCT +
Preference number: 2 (lower is better)
Translates to: LAVVMCVATAVQVLLACVLLQLD*TGPGMP
Trigger: AGGCATCCCAGGACCAGTGCAATCCAGTTGAAGTAG...CACGCAGGCTAGCAGGACCTGGACAGCTGTGGCCACACACATGACAACGGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR CCA 90 bp CAAGCCCTTCCGACGCTCCTCAGATATGCGAGACCACGAGCGGGTGCATACAGGACTCAGGCTAATGCCTaGGACATGGCAAATCCTCAC +
Preference number: 2 (lower is better)
Translates to: QALPTLLRYARPRAGAYRTQANA*DMANPH
Trigger: GTGAGGATTTGCCATGTCCCAGGCATTAGCCTGAGT...CCTGTATGCACCCGCTCGTGGTCTCGCATATCTGAGGAGCGTCGGAAGGGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR CCA 90 bp CAAGCCCTTCCGACGCTCCTCAGATATGCGAGACCACGAGCGGGTGCATACAGGCAGACCAGACCAGGCTaGAAAGCAAGACTTTCTGTA +
Preference number: 2 (lower is better)
Translates to: QALPTLLRYARPRAGAYRQTRPG*KARLSV
Trigger: TACAGAAAGTCTTGCTTTCCAGCCTGGTCTGGTCTG...CCTGTATGCACCCGCTCGTGGTCTCGCATATCTGAGGAGCGTCGGAAGGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR TCA 90 bp GCCCTGTGTCCTGCTGCCTTCCGTCTAGTCTCAGAGCTGCTGTTTCATGAGCATATCTGGAATGGTGAGTaGCCAGGCTTGGGCTGTTTG +
Preference number: 2 (lower is better)
Translates to: ALCPAAFRLVSELLFHEHIWNGE*PGLGCL
Trigger: CAAACAGCCCAAGCCTGGTCACTCACCATTCCAGAT...ATGCTCATGAAACAGCAGCTCTGAGACTAGACGGAAGGCAGCAGGACACAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR GCA 90 bp TGTGGCAAAGGCTTCACGCAGTCCTCTGTGCTGAGTGGTCATGCCCGCATCCACAGCCAGCTATGGTGGTaGACACCTTTAATCTCAGCA +
Preference number: 2 (lower is better)
Translates to: CGKGFTQSSVLSGHARIHSQLWW*TPLISA
Trigger: TGCTGAGATTAAAGGTGTGCACCACCATAGCTGGCT...GTGGATGCGGGCATGACCACTCAGCACAGAGGACTGCGTGAAGCCTTTGCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR TCA 90 bp CAAGCCCTTCCGACGCTCCTCAGATATGCGAGACCACGAGCGGGTGCATACAGGGATAAAATCTGGGGCTaGAGTAATAGCTCAGCAGTT +
Preference number: 2 (lower is better)
Translates to: QALPTLLRYARPRAGAYRDKIWG*SNSSAV
Trigger: AACTGCTGAGCTATTACTTCAGCCCCAGATTTTATC...CCTGTATGCACCCGCTCGTGGTCTCGCATATCTGAGGAGCGTCGGAAGGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR CCA 90 bp TGTGGCAAAGGCTTCACGCAGTCCTCTGTGCTGAGTGGTCATGCCCGCATCCACTCTCTAAAGGGATGCTaGGATACCTTCCCCTCAAAA +
Preference number: 2 (lower is better)
Translates to: CGKGFTQSSVLSGHARIHSLKGC*DTFPSK
Trigger: TTTTGAGGGGAAGGTATCCCAGCATCCCTTTAGAGA...GTGGATGCGGGCATGACCACTCAGCACAGAGGACTGCGTGAAGCCTTTGCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CAA 90 bp GAAAAAGGGAACCTGGTTCTGGTCTCCCAGAAACCCATGCTACACTaGAGACTCAGGAAAGAGGTACTTGGGGTCTGTGGGTACCCAGAT +
Preference number: 2 (lower is better)
Translates to: EKGNLVLVSQKPMLH*RLRKEVLGVCGYPD
Trigger: ATCTGGGTACCCACAGACCCCAAGTACCTCTTTCCTGAGTCTCAAGTGTAGCATGGGTTTCTGGGAGACCAGAACCAGGTTCCCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR TCA 90 bp CTAGCCTGCGTGCCCATTACAGCTTGCACACAGGAGAACGGCCTTACCGCTGTTGAGACGATCCTCGGATaGTGCATAATAAAAACTCAC +
Preference number: 2 (lower is better)
Translates to: LACVPITACTQENGLTAVETILG*CIIKTH
Trigger: GTGAGTTTTTATTATGCATCATCCGAGGATCGTCTC...AACAGCGGTAAGGCCGTTCTCCTGTGTGCAAGCTGTAATGGGCACGCAGGCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR CCA 90 bp TCCGATGCATGCTCTGTGACCGCACTTTCAATAACTCCTCCAACTTCCGCAAACAGGGCTCAGCAGGATTaGGAGAGGGATAAGAGCATA +
Preference number: 2 (lower is better)
Translates to: SDACSVTALSITPPTSANRAQQD*ERDKSI
Trigger: TATGCTCTTATCCCTCTCCCAATCCTGCTGAGCCCT...GTTTGCGGAAGTTGGAGGAGTTATTGAAAGTGCGGTCACAGAGCATGCATCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR TCA 90 bp TCCAGGAGAGCCAAGGGTTACATAGAGAGACCATGTCTCAAAAATGGGGGAAAATGTTTCCATGGTGGCTaGGAGCATCATGGAAGGGAG +
Preference number: 2 (lower is better)
Translates to: SRRAKGYIERPCLKNGGKCFHGG*EHHGRE
Trigger: CTCCCTTCCATGATGCTCTCAGCCACCATGGAAACA...TTTTCCCCCATTTTTGAGACATGGTCTCTCTATGTAACCCTTGGCTCTCCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
3UTR-3UTR TCA 90 bp ATTTGGAGGTCAGAGGGCATCTCAGGAAGTCAGTCAGTCTGTCTTTCCACCCTGGCAGTTACTTCCAGATaGTTGTTGTGTGATTCCCAA +
Preference number: 2 (lower is better)
Translates to: IWRSEGISGSQSVCLSTLAVTSR*LLCDSQ
Trigger: TTGGGAATCACACAACAATCATCTGGAAGTAACTGC...CAGGGTGGAAAGACAGACTGACTGACTTCCTGAGATGCCCTCTGACCTCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR CCA 90 bp GAATTCCAGGAGAGCCAAGGGTTACATAGAGAGACCATGTCTCAAAAATGGGGGCTAATGCCTGGGACATaGCAAATCCTCACTCAACTG +
Preference number: 2 (lower is better)
Translates to: EFQESQGLHRETMSQKWGLMPGT*QILTQL
Trigger: CAGTTGAGTGAGGATTTGCCATGTCCCAGGCATTAG...CCCCCATTTTTGAGACATGGTCTCTCTATGTAACCCTTGGCTCTCCTGGAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR GCA 72 bp AAGGGTGGCCCAGGAGAGGTCGGAGGTGGTGATGGCTaGAGCAGCTGCGGGTGCTGTGGTAGGCAAGCCTTT +
Preference number: 3 (lower is better)
Translates to: KGGPGEVGGGDG*SSCGCCGRQAF
Trigger: AAAGGCTTGCCTACCACAGCACCCGCAGCTGCTGCAGCCATCACCACCTCCGACCTCTCCTGGGCCACCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR GCA 72 bp GGTTTTGTGCCAAGCCCTTCCGACGCTCCTCAGATATaGGAGACCACGAGCGGGTGCATACAGGGGAGCGGC +
Preference number: 3 (lower is better)
Translates to: GFVPSPSDAPQI*ETTSGCIQGSG
Trigger: GCCGCTCCCCTGTATGCACCCGCTCGTGGTCTCGCATATCTGAGGAGCGTCGGAAGGGCTTGGCACAAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR GCA 72 bp GCAGCTGCGGGTGCTGTGGTAGGCAAGCCTTTCGCCTaGAGGTTTTGTGCCAAGCCCTTCCGACGCTCCTCA +
Preference number: 3 (lower is better)
Translates to: AAAGAVVGKPFA*RFCAKPFRRSS
Trigger: TGAGGAGCGTCGGAAGGGCTTGGCACAAAACCTGCAGGCGAAAGGCTTGCCTACCACAGCACCCGCAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR GCA 72 bp GAGGTCGGAGGTGGTGATGGCTGCAGCAGCTGCGGGTaGTGTGGTAGGCAAGCCTTTCGCCTGCAGGTTTTG +
Preference number: 3 (lower is better)
Translates to: EVGGGDGCSSCG*CGRQAFRLQVL
Trigger: CAAAACCTGCAGGCGAAAGGCTTGCCTACCACAGCACCCGCAGCTGCTGCAGCCATCACCACCTCCGACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR TCA 72 bp GTATCTGTGGCAAAGGCTTCACGCAGTCCTCTGTGCTaGGTGGTCATGCCCGCATCCACACAGGCGAGCGCC +
Preference number: 3 (lower is better)
Translates to: VSVAKASRSPLC*VVMPASTQASA
Trigger: GGCGCTCGCCTGTGTGGATGCGGGCATGACCACTCAGCACAGAGGACTGCGTGAAGCCTTTGCCACAGATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR GCA 72 bp TTGCACACAGGAGAACGGCCTTACCGCTGTTCCCTCTaGCCACGGGCTTTTAAGGCCTTGGCACCTCTGCTC +
Preference number: 3 (lower is better)
Translates to: LHTGERPYRCSL*PRAFKALAPLL
Trigger: GAGCAGAGGTGCCAAGGCCTTAAAAGCCCGTGGGCAGAGGGAACAGCGGTAAGGCCGTTCTCCTGTGTGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR GCA 72 bp ATGTGTGTGGCCACAGCTGTCCAGGTCCTGCTAGCCTaGGTGCCCATTACAGCTTGCACACAGGAGAACGGC +
Preference number: 3 (lower is better)
Translates to: MCVATAVQVLLA*VPITACTQENG
Trigger: GCCGTTCTCCTGTGTGCAAGCTGTAATGGGCACGCAGGCTAGCAGGACCTGGACAGCTGTGGCCACACACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CCA 72 bp GGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTaGCTGAGAGCATCATGGAAGGGAGTCTCGGGGTCT +
Preference number: 3 (lower is better)
Translates to: GLADRRLPVFPW*LRASWKGVSGS
Trigger: AGACCCCGAGACTCCCTTCCATGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
3UTR GCA 72 bp TGCTGTGGTAGGCAAGCCTTTCGCCTGCAGGTTTTGTaGCAAGCCCTTCCGACGCTCCTCAGATATGCGAGA +
Preference number: 3 (lower is better)
Translates to: CCGRQAFRLQVL*QALPTLLRYAR
Trigger: TCTCGCATATCTGAGGAGCGTCGGAAGGGCTTGGCACAAAACCTGCAGGCGAAAGGCTTGCCTACCACAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR CAA 90 bp CAAAGCAAGTCCATAGCTAGCCTAGACTACATGAGACCGTCTCCAGTAAGTCTGCGCCCAGGTCAGGGCTaGGCAGACAGAAGGCTTCCG +
Preference number: 3 (lower is better)
Translates to: QSKSIASLDYMRPSPVSLRPGQG*ADRRLP
Trigger: CGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCG...CAGACTTACTGGAGACGGTCTCATGTAGTCTAGGCTAGCTATGGACTTGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
3UTR-3UTR CAA 90 bp CAAGCCCTTCCGACGCTCCTCAGATATGCGAGACCACGAGCGGGTGCATACAGGGAAAGTAAGACTGGCTaGTTGGCAAGAAAGGGCTCA +
Preference number: 3 (lower is better)
Translates to: QALPTLLRYARPRAGAYRESKTG*LARKGS
Trigger: TGAGCCCTTTCTTGCCAACAAGCCAGTCTTACTTTC...CCTGTATGCACCCGCTCGTGGTCTCGCATATCTGAGGAGCGTCGGAAGGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR CAA 90 bp GCCCTGTGTCCTGCTGCCTTCCGTCTAGTCTCAGAGCTGCTGTTTCATGAGCATCCTACTTCAACTGGATaGCACTGGTCCTGGGATGCC +
Preference number: 3 (lower is better)
Translates to: ALCPAAFRLVSELLFHEHPTSTG*HWSWDA
Trigger: GGCATCCCAGGACCAGTGCAATCCAGTTGAAGTAGG...ATGCTCATGAAACAGCAGCTCTGAGACTAGACGGAAGGCAGCAGGACACAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR TCA 72 bp TGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTaGGAGCATCATGGAAGGGAGTCTCGGGGTCTCAAA +
Preference number: 3 (lower is better)
Translates to: WQTEGFRCFHGG*EHHGRESRGLK
Trigger: TTTGAGACCCCGAGACTCCCTTCCATGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
3UTR TCA 72 bp CTCACACCCACCTGTGGCTCTAGATTGAGGATGCAATaGCCTCTTCTGGCTTCCATGGGCACCAGGCACCAA +
Preference number: 3 (lower is better)
Translates to: LTPTCGSRLRMQ*PLLASMGTRHQ
Trigger: TTGGTGCCTGGTGCCCATGGAAGCCAGAAGAGGTCATTGCATCCTCAATCTAGAGCCACAGGTGGGTGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR TCA 72 bp CCCACCTGTAGCTCACACCCACCTGTGGCTCTAGATTaGGGATGCAATGACCTCTTCTGGCTTCCATGGGCA +
Preference number: 3 (lower is better)
Translates to: PTCSSHPPVALD*GCNDLFWLPWA
Trigger: TGCCCATGGAAGCCAGAAGAGGTCATTGCATCCTCAATCTAGAGCCACAGGTGGGTGTGAGCTACAGGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CCA 72 bp AGGCAGGAGGATCATGAGGTCCAGACCAGACCAGGCTaGAAAGCAAGACTTTCTGTACCACCACCTCTGGTC +
Preference number: 3 (lower is better)
Translates to: RQEDHEVQTRPG*KARLSVPPPLV
Trigger: GACCAGAGGTGGTGGTACAGAAAGTCTTGCTTTCCAGCCTGGTCTGGTCTGGACCTCATGATCCTCCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CCA 72 bp GGAGAGGGTGTGAGTGTGTGCCATGGCACAGGAATTTaGAGGTCAGAGGGCATCTCAGGAAGTCAGTCAGTC +
Preference number: 3 (lower is better)
Translates to: GEGVSVCHGTGI*RSEGISGSQSV
Trigger: GACTGACTGACTTCCTGAGATGCCCTCTGACCTCCAAATTCCTGTGCCATGGCACACACTCACACCCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR CAA 90 bp TGTGTGGCCACAGCTGTCCAGGTCCTGCTAGCCTGCGTGCCCATTACAGCTTGCTCTCATGGAGATGTGTaGCTAGTTCAGTCCTTGTCA +
Preference number: 3 (lower is better)
Translates to: CVATAVQVLLACVPITACSHGDV*LVQSLS
Trigger: TGACAAGGACTGAACTAGCAACACATCTCCATGAGA...GCAAGCTGTAATGGGCACGCAGGCTAGCAGGACCTGGACAGCTGTGGCCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR CAA 90 bp CACTGGTCCTGGGATGCCTACCCTCCAGTGCAGAAGATGCCCACCAAGTCATCTCCAGGCTTGGGCTGTTaGGAGATGTCTATTTGGTTG +
Preference number: 3 (lower is better)
Translates to: HWSWDAYPPVQKMPTKSSPGLGC*EMSIWL
Trigger: CAACCAAATAGACATCTCCAAACAGCCCAAGCCTGG...AGATGACTTGGTGGGCATCTTCTGCACTGGAGGGTAGGCATCCCAGGACCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR TCA 72 bp AATCCCAGTACACTAGAGGCTGAGGCAGGAGGATCATaGGGTCCAGACCAGACCAGGCTGGAAAGCAAGACT +
Preference number: 3 (lower is better)
Translates to: NPSTLEAEAGGS*GPDQTRLESKT
Trigger: AGTCTTGCTTTCCAGCCTGGTCTGGTCTGGACCTCATGATCCTCCTGCCTCAGCCTCTAGTGTACTGGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR GCA 72 bp CTCTTCTGGCTTCCATGGGCACCAGGCACCAAGCGGTaGACAAACATACACGCAGGCAAAACACCCATATAC +
Preference number: 3 (lower is better)
Translates to: LFWLPWAPGTKR*TNIHAGKTPIY
Trigger: GTATATGGGTGTTTTGCCTGCGTGTATGTTTGTGCACCGCTTGGTGCCTGGTGCCCATGGAAGCCAGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR TCA 72 bp TCATGGAAGGGAGTCTCGGGGTCTCAAATCAGTTCCTaGGAGGGCGACTTCCCTGTTTCACTCAGGCTAATG +
Preference number: 3 (lower is better)
Translates to: SWKGVSGSQISS*EGDFPVSLRLM
Trigger: CATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTGATTTGAGACCCCGAGACTCCCTTCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
3UTR TCA 72 bp ACCTGGTTCTGGTCTCCCAGAAACCCATGCTACACTTaGGACTCAGGAAAGAGGTACTTGGGGTCTGTGGGT +
Preference number: 3 (lower is better)
Translates to: TWFWSPRNPCYT*DSGKRYLGSVG
Trigger: ACCCACAGACCCCAAGTACCTCTTTCCTGAGTCTCAAGTGTAGCATGGGTTTCTGGGAGACCAGAACCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CCA 72 bp AGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTaGGACATGGCAAATCCTCACTCAACTGAAACACCC +
Preference number: 3 (lower is better)
Translates to: RGRLPCFTQANA*DMANPHSTETP
Trigger: GGGTGTTTCAGTTGAGTGAGGATTTGCCATGTCCCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CCA 72 bp AATGTTTTGCCTACTTCAACTGGATTGCACTGGTCCTaGGATGCCTACCCTCCAGTGCAGAAGATGCCCACC +
Preference number: 3 (lower is better)
Translates to: NVLPTSTGLHWS*DAYPPVQKMPT
Trigger: GGTGGGCATCTTCTGCACTGGAGGGTAGGCATCCCAGGACCAGTGCAATCCAGTTGAAGTAGGCAAAACATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR CAA 90 bp CTAGCCTGCGTGCCCATTACAGCTTGCACACAGGAGAACGGCCTTACCGCTGTTGTGTACAACCAAAGTTaGTGTGTGTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: LACVPITACTQENGLTAVVYNQS*CVCVCV
Trigger: CACACACACACACACACACAAACTTTGGTTGTACAC...AACAGCGGTAAGGCCGTTCTCCTGTGTGCAAGCTGTAATGGGCACGCAGGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR-3UTR CAA 90 bp CTAGCCTGCGTGCCCATTACAGCTTGCACACAGGAGAACGGCCTTACCGCTGTTTCTTCTCTGTCAGTCTaGTATTCCAATTCTCTGGGT +
Preference number: 3 (lower is better)
Translates to: LACVPITACTQENGLTAVSSLSV*YSNSLG
Trigger: ACCCAGAGAATTGGAATACAAGACTGACAGAGAAGA...AACAGCGGTAAGGCCGTTCTCCTGTGTGCAAGCTGTAATGGGCACGCAGGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CCA 72 bp AGACTGGCTTGTTGGCAAGAAAGGGCTCAGCAGGATTaGGAGAGGGATAAGAGCATAGTGGAGGTTGTGTGT +
Preference number: 3 (lower is better)
Translates to: RLACWQERAQQD*ERDKSIVEVVC
Trigger: ACACACAACCTCCACTATGCTCTTATCCCTCTCCCAATCCTGCTGAGCCCTTTCTTGCCAACAAGCCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CCA 72 bp ATCTCAGGAAGTCAGTCAGTCTGTCTTTCCACCCTGTaGGTCCCAGGGATCATACTCAGGTCGTCAGATTTG +
Preference number: 3 (lower is better)
Translates to: ISGSQSVCLSTL*VPGIILRSSDL
Trigger: CAAATCTGACGACCTGAGTATGATCCCTGGGACCCACAGGGTGGAAAGACAGACTGACTGACTTCCTGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR TCA 72 bp GACCAGGGTCTGGAGTGGGAGAGTCTAGAGGCCAACTaGGATCATCTTCAGTGTCCCAAGAATCATGAAGTA +
Preference number: 3 (lower is better)
Translates to: DQGLEWESLEAN*DHLQCPKNHEV
Trigger: TACTTCATGATTCTTGGGACACTGAAGATGATCTCAGTTGGCCTCTAGACTCTCCCACTCCAGACCCTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CCA 72 bp CTGTCTCTTAGGAGCTATAGGCATTTAATGGTTGCCTaGAGAGGGGGAACCATAGTCCTCAGTGGTAGAGCT +
Preference number: 3 (lower is better)
Translates to: LSLRSYRHLMVA*RGGTIVLSGRA
Trigger: AGCTCTACCACTGAGGACTATGGTTCCCCCTCTCCAGGCAACCATTAAATGCCTATAGCTCCTAAGAGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CCA 72 bp ATTTATTATGTGAGGAGAGGGTGTGAGTGTGTGCCATaGCACAGGAATTTGGAGGTCAGAGGGCATCTCAGG +
Preference number: 3 (lower is better)
Translates to: IYYVRRGCECVP*HRNLEVRGHLR
Trigger: CCTGAGATGCCCTCTGACCTCCAAATTCCTGTGCCATGGCACACACTCACACCCTCTCCTCACATAATAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR GCA 72 bp TTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTaGGCGCGCGCATACAGATACAGATATGTGTCAAAC +
Preference number: 3 (lower is better)
Translates to: FVCVCVCVCVCV*ARAYRYRYVSN
Trigger: GTTTGACACATATCTGTATCTGTATGCGCGCGCGCACACACACACACACACACACACACACACACACACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CCA 72 bp CAGAAGATGCCCACCAAGTCATCTCTAAAGGGATGCTaGGATACCTTCCCCTCAAAACCGAGAGTACCTAAA +
Preference number: 3 (lower is better)
Translates to: QKMPTKSSLKGC*DTFPSKPRVPK
Trigger: TTTAGGTACTCTCGGTTTTGAGGGGAAGGTATCCCAGCATCCCTTTAGAGATGACTTGGTGGGCATCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR TCA 72 bp CTTGTCATCCAGCATCCCCAAGAGACGATCCTCGGATaGTGCATAATAAAAACTCACCAGCTCCTCCAAAGA +
Preference number: 3 (lower is better)
Translates to: LVIQHPQETILG*CIIKTHQLLQR
Trigger: TCTTTGGAGGAGCTGGTGAGTTTTTATTATGCATCATCCGAGGATCGTCTCTTGGGGATGCTGGATGACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR GCA 72 bp TTTCTGTACCACCACCTCTGGTCCAATGAAATGTTTTaGCTACTTCAACTGGATTGCACTGGTCCTGGGATG +
Preference number: 3 (lower is better)
Translates to: FLYHHLWSNEMF*LLQLDCTGPGM
Trigger: CATCCCAGGACCAGTGCAATCCAGTTGAAGTAGGCAAAACATTTCATTGGACCAGAGGTGGTGGTACAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR TCA 72 bp CCAATTCTCTGGGTAGTTATCCATTATCTGGAATGGTaGGTGACCAGGCTTGGGCTGTTTGGAGATGTCTAT +
Preference number: 3 (lower is better)
Translates to: PILWVVIHYLEW*VTRLGLFGDVY
Trigger: ATAGACATCTCCAAACAGCCCAAGCCTGGTCACTCACCATTCCAGATAATGGATAACTACCCAGAGAATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CCA 72 bp TGTGTTAAGTTCCTCAGGTATGCTCTCCCAGCCTACTaGAGTGTGAATGTCATGTCCGATCAATTCATCAGT +
Preference number: 3 (lower is better)
Translates to: CVKFLRYALPAY*SVNVMSDQFIS
Trigger: ACTGATGAATTGATCGGACATGACATTCACACTCCAGTAGGCTGGGAGAGCATACCTGAGGAACTTAACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
3UTR CCA 72 bp CAGGCTGGAAAGCAAGACTTTCTGTACCACCACCTCTaGTCCAATGAAATGTTTTGCCTACTTCAACTGGAT +
Preference number: 3 (lower is better)
Translates to: QAGKQDFLYHHL*SNEMFCLLQLD
Trigger: ATCCAGTTGAAGTAGGCAAAACATTTCATTGGACCAGAGGTGGTGGTACAGAAAGTCTTGCTTTCCAGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CCA 72 bp AAGAAAATAAAAGACAGGAAAGTAAGACTGGCTTGTTaGCAAGAAAGGGCTCAGCAGGATTGGGAGAGGGAT +
Preference number: 3 (lower is better)
Translates to: KKIKDRKVRLAC*QERAQQDWERD
Trigger: ATCCCTCTCCCAATCCTGCTGAGCCCTTTCTTGCCAACAAGCCAGTCTTACTTTCCTGTCTTTTATTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CCA 72 bp TGGTGTACTTACTCAGAAGGGTCCCTAATTTTCTCATaGAGATGTGTTGCTAGTTCAGTCCTTGTCATCCAG +
Preference number: 3 (lower is better)
Translates to: WCTYSEGSLIFS*RCVASSVLVIQ
Trigger: CTGGATGACAAGGACTGAACTAGCAACACATCTCCATGAGAAAATTAGGGACCCTTCTGAGTAAGTACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CCA 72 bp AGTTATCCATTATCTGGAATGGTGAGTGACCAGGCTTaGGCTGTTTGGAGATGTCTATTTGGTTGTGTTGTA +
Preference number: 3 (lower is better)
Translates to: SYPLSGMVSDQA*AVWRCLFGCVV
Trigger: TACAACACAACCAAATAGACATCTCCAAACAGCCCAAGCCTGGTCACTCACCATTCCAGATAATGGATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR TCA 72 bp ATTTGGTTGTGTTGTAAGAAGTTTTGTGCAATGAGGTaGTGTAGGAGGTTGGTGTACTTACTCAGAAGGGTC +
Preference number: 3 (lower is better)
Translates to: IWLCCKKFCAMR*CRRLVYLLRRV
Trigger: GACCCTTCTGAGTAAGTACACCAACCTCCTACATCACCTCATTGCACAAAACTTCTTACAACACAACCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR GCA 72 bp TTTGGTAAGTGTCTTTACCCACTGAGACATCTTCACTaGCAAAGCAAGTGTTTGAATAAGTGGAGGCATTAT +
Preference number: 3 (lower is better)
Translates to: FGKCLYPLRHLH*QSKCLNKWRHY
Trigger: ATAATGCCTCCACTTATTCAAACACTTGCTTTGGCAGTGAAGATGTCTCAGTGGGTAAAGACACTTACCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR TCA 72 bp TGTCTATTTGGTTGTGTTGTAAGAAGTTTTGTGCAATaGGGTGATGTAGGAGGTTGGTGTACTTACTCAGAA +
Preference number: 3 (lower is better)
Translates to: CLFGCVVRSFVQ*GDVGGWCTYSE
Trigger: TTCTGAGTAAGTACACCAACCTCCTACATCACCTCATTGCACAAAACTTCTTACAACACAACCAAATAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR TCA 90 bp CAAGCCCTTCCGACGCTCCTCAGATATGCGAGACCACGAGCGGGTGCATACAGGTACCGGGAGGCCCAGTaGAGGGAGTGCGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QALPTLLRYARPRAGAYRYREAQ*RECGPR
Trigger: CCTGGGCCCGCACTCCCTTCACTGGGCCTCCCGGTA...CCTGTATGCACCCGCTCGTGGTCTCGCATATCTGAGGAGCGTCGGAAGGGCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR TCA 90 bp AGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCCGTTGCAGGGGTGGCTaGGGGGCCAGAGGACACTGC +
Preference number: 4 (lower is better)
Translates to: SAQVRAWQTEGFRCFHGGRCRGG*GARGHC
Trigger: GCAGTGTCCTCTGGCCCCTCAGCCACCCCTGCAACG...GCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR TCA 90 bp GGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCAGTCGGCCGGCCCACCTaGAGTGCCTGCAGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GQGLADRRLPVFPWWLRAVGRPT*SACSSG
Trigger: CCCGGAGCTGCAGGCACTTCAGGTGGGCCGGCCGAC...TGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp CCTAGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTCGGAGTCCCGGCCGCTaGGTGGGCTGCCTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: PSAQVRAWQTEGFRCFHGRSPGR*VGCLVL
Trigger: AAGCACCAGGCAGCCCACGCAGCGGCCGGGACTCCG...ACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCTAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR TCA 90 bp AGTCTCCCTAGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCGGCCGCTGCTCTGTGTaGCAGCGCTGGTGGCGCATC +
Preference number: 4 (lower is better)
Translates to: SLPSAQVRAWQTEGFRCFGRCSV*QRWWRI
Trigger: GATGCGCCACCAGCGCTGTCACACAGAGCAGCGGCC...GAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCTAGGGAGACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp AGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCCTCCAGGCCCAGGGGTaGGCCCACCACGTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SAQVRAWQTEGFRCFHGGLQAQG*AHHVSG
Trigger: ACCTGAAACGTGGTGGGCCCACCCCTGGGCCTGGAG...GCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp AGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCCAGGCGTTGCAGGGGTaGCTGAGGGGCCAGAGGACA +
Preference number: 4 (lower is better)
Translates to: SAQVRAWQTEGFRCFHGGQALQG*LRGQRT
Trigger: TGTCCTCTGGCCCCTCAGCCACCCCTGCAACGCCTG...GCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp GGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCATGGAAGGGTGGTCCCCTGGCCGGTaGCGAGGCCTGTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: GRQKASGVSMVAESIMEGWSPGR*RGLWLR
Trigger: CCGGAGCCACAGGCCTCGCCACCGGCCAGGGGACCA...CCCTTCCATGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR TCA 90 bp GCAGCTGCGGGTGCTGTGGTAGGCAAGCCTTTCGCCTGCAGGTTTTGTGCCAAGGGGAGTGCCCAGTCCTaGTGCTACTCCAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: AAAGAVVGKPFACRFCAKGSAQS*CYSRPR
Trigger: CCTGGGCCTGGAGTAGCATCAGGACTGGGCACTCCC...CTTGGCACAAAACCTGCAGGCGAAAGGCTTGCCTACCACAGCACCCGCAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR TCA 90 bp CCTAGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTAAGGGCCTGCCGCCCTaGTGGGCAGCCAGATGCTTC +
Preference number: 4 (lower is better)
Translates to: PSAQVRAWQTEGFRCFHGKGLPP*WAARCF
Trigger: GAAGCATCTGGCTGCCCATCAGGGCGGCAGGCCCTT...ACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR GCA 90 bp CTGGTCCTGGGATGCCTACCCTCCAGTGCAGAAGATGCCCACCAAGTCATCTCTCGGAGTCCCGGCCGCTaGGTGGGCTGCCTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: LVLGCLPSSAEDAHQVISRSPGR*VGCLVL
Trigger: AAGCACCAGGCAGCCCACGCAGCGGCCGGGACTCCG...AGAGATGACTTGGTGGGCATCTTCTGCACTGGAGGGTAGGCATCCCAGGACCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR GCA 90 bp CCTAGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGTGTGCACCACGCGGTaGTGCCGCAGGTACCAGGAG +
Preference number: 4 (lower is better)
Translates to: PSAQVRAWQTEGFRCFHGVCTTR*CRRYQE
Trigger: CTCCTGGTACCTGCGGCAGCACCGCGTGGTGCACAC...ACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp CAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCATGGCAGAGGGAGGCATaGCCACCCCGGGTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: QGLADRRLPVFPWWLRASWQREA*PPRVGQ
Trigger: CTGCCCCACCCGGGGTGGCCATGCCTCCCTCTGCCA...TGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp CTCCCTAGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGCCACAGGTGGTGCGTaGGCAGCCTTGTGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: LPSAQVRAWQTEGFRCFHATGGA*AALCRS
Trigger: GCTGCGACACAAGGCTGCCCACGCACCACCTGTGGC...ATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCTAGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp CTCCCTAGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATCTCCGTGGCCACAGGTaGTGCGTGGGCAGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: LPSAQVRAWQTEGFRCFHLRGHR*CVGSLV
Trigger: CACAAGGCTGCCCACGCACCACCTGTGGCCACGGAG...ATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCTAGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp CAAGCCCTTCCGACGCTCCTCAGATATGCGAGACCACGAGCGGGTGCATACAGGGTGTGGATGCGCTCGTaGCGCTTCAGGGTCTCGCGG +
Preference number: 4 (lower is better)
Translates to: QALPTLLRYARPRAGAYRVWMRS*RFRVSR
Trigger: CCGCGAGACCCTGAAGCGCCACGAGCGCATCCACAC...CCTGTATGCACCCGCTCGTGGTCTCGCATATCTGAGGAGCGTCGGAAGGGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR TCA 90 bp CCTAGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGGCTGCCTGGTGCTTaGGGAGGTAGGAAGCATCGC +
Preference number: 4 (lower is better)
Translates to: PSAQVRAWQTEGFRCFHGGLPGA*GGRKHR
Trigger: GCGATGCTTCCTACCTCCTCAAGCACCAGGCAGCCC...ACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR TCA 90 bp CAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGGACATGCCTGGCGGTGGCGTGTaGGGCTCTGCGGGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: QFLRGRLPCFTQANAWDMPGGGV*GSAGSR
Trigger: TCGGCTACCCGCAGAGCCTCACACGCCACCGCCAGG...CATGTCCCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR TCA 90 bp CTAGCCGTTGTCATGTGTGTGGCCACAGCTGTCCAGGTCCTGCTAGCCTGCGTGCGCATGTGGCACAGCTaGAGCGCTCAGCGCCTGAAC +
Preference number: 4 (lower is better)
Translates to: LAVVMCVATAVQVLLACVRMWHS*SAQRLN
Trigger: GTTCAGGCGCTGAGCGCTTCAGCTGTGCCACATGCG...CACGCAGGCTAGCAGGACCTGGACAGCTGTGGCCACACACATGACAACGGCTAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR GCA 90 bp GGAGAACGGCCTTACCGCTGTTCCCTCTGCCCACGGGCTTTTAAGGCCTTGGCACCGAGCAGCAGCGGATaGGCGCTGAGAAGTGGGACA +
Preference number: 4 (lower is better)
Translates to: GERPYRCSLCPRAFKALAPSSSG*ALRSGT
Trigger: TGTCCCACTTCTCAGCGCGCATCCGCTGCTGCTCGG...TGCCAAGGCCTTAAAAGCCCGTGGGCAGAGGGAACAGCGGTAAGGCCGTTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp CCTAGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTCTGTGGCACTGGCTGTaGATACCGGGAGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: PSAQVRAWQTEGFRCFHGLWHWL*IPGGPV
Trigger: CACTGGGCCTCCCGGTATCCACAGCCAGTGCCACAG...ACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp CCTAGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTAGCTGGCTGTGGCACTaGCTGTGGATACCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: PSAQVRAWQTEGFRCFHGSWLWH*LWIPGG
Trigger: GCCTCCCGGTATCCACAGCCAGTGCCACAGCCAGCT...ACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp CAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCACATGGCCACCCCGGGTaGGGCAGCAGGGGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: QGLADRRLPVFPWWLRASHGHPG*GSRGGV
Trigger: AACACCACCCCTGCTGCCCCACCCGGGGTGGCCATG...TGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp GGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCATGGAAGGGCATGGCCACCCCGGGTaGGGCAGCAGGGGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: GRQKASGVSMVAESIMEGHGHPG*GSRGGV
Trigger: AACACCACCCCTGCTGCCCCACCCGGGGTGGCCATG...CCCTTCCATGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp CAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGGACATGTGGCAGAGGGAGGCATaGCCACCCCGGGTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: QFLRGRLPCFTQANAWDMWQREA*PPRVGQ
Trigger: CTGCCCCACCCGGGGTGGCCATGCCTCCCTCTGCCA...CATGTCCCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp CTCCCTAGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATCAGGAGGTAAGGACCTaGGGGGAAGGGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LPSAQVRAWQTEGFRCFHQEVRT*GEGRWW
Trigger: CCACCACCTCCCTTCCCCCCAGGTCCTTACCTCCTG...ATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCTAGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp CTAGCCTGCGTGCCCATTACAGCTTGCACACAGGAGAACGGCCTTACCGCTGTTCGATGCACCTGGCGGTaGCGTGTGAGGCTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: LACVPITACTQENGLTAVRCTWR*RVRLCG
Trigger: CCCGCAGAGCCTCACACGCCACCGCCAGGTGCATCG...AACAGCGGTAAGGCCGTTCTCCTGTGTGCAAGCTGTAATGGGCACGCAGGCTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp CAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCACGATGCACCTGGCGGTaGCGTGTGAGGCTCTGCGGG +
Preference number: 4 (lower is better)
Translates to: QGLADRRLPVFPWWLRASRCTWR*RVRLCG
Trigger: CCCGCAGAGCCTCACACGCCACCGCCAGGTGCATCG...TGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp CAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGGACATGGTCCACAGGCCCCAGTaGTCCCCTGGCCGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: QFLRGRLPCFTQANAWDMVHRPQ*SPGRWR
Trigger: TCGCCACCGGCCAGGGGACCACTGGGGCCTGTGGAC...CATGTCCCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp GGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCACGTTGTCCAGCACGCTaGATGCATCGGTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GQGLADRRLPVFPWWLRARCPAR*MHRCRR
Trigger: GCGGCGGCACCGATGCATCCAGCGTGCTGGACAACG...TGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR TCA 90 bp GGAGAACGGCCTTACCGCTGTTCCCTCTGCCCACGGGCTTTTAAGGCCTTGGCACCTCCGCCTTGGGTTTaGAACTGGACTGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: GERPYRCSLCPRAFKALAPPPWV*NWTGVG
Trigger: ACCCACCCCAGTCCAGTTTCAAACCCAAGGCGGAGG...TGCCAAGGCCTTAAAAGCCCGTGGGCAGAGGGAACAGCGGTAAGGCCGTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR TCA 90 bp GTTCCTCAGGTATGCTCTCCCAGCCTACTGGAGTGTGAATGTCATGTCCGATCAGTCGGCCGGCCCACCTaGAGTGCCTGCAGCTCCGGG +
Preference number: 4 (lower is better)
Translates to: VPQVCSPSLLECECHVRSVGRPT*SACSSG
Trigger: CCCGGAGCTGCAGGCACTTCAGGTGGGCCGGCCGAC...TGATCGGACATGACATTCACACTCCAGTAGGCTGGGAGAGCATACCTGAGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR TCA 90 bp CCTCAGGTATGCTCTCCCAGCCTACTGGAGTGTGAATGTCATGTCCGATCAATTCAGGCGCCGCAGCGCTaGGGCCGAGCCACAGCGTGC +
Preference number: 4 (lower is better)
Translates to: PQVCSPSLLECECHVRSIQAPQR*GRATAC
Trigger: GCACGCTGTGGCTCGGCCTCAGCGCTGCGGCGCCTG...AATTGATCGGACATGACATTCACACTCCAGTAGGCTGGGAGAGCATACCTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR GCA 90 bp GGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCAGGTACAGGGCAGGGCTaGCACTGCCTTGGCGTGTTC +
Preference number: 4 (lower is better)
Translates to: GQGLADRRLPVFPWWLRAGTGQG*HCLGVF
Trigger: GAACACGCCAAGGCAGTGGCAGCCCTGCCCTGTACC...TGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp AGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCCGGGTGTGCACCACGTaGTGCTTGCTCAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: SAQVRAWQTEGFRCFHGGRVCTT*CLLRWK
Trigger: CTTCCATCTGAGCAAGCACCACGTGGTGCACACCCG...GCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR TCA 90 bp GGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCAGGCTCTCCCTCCGGTTaGAGCTTTTGCTGCACACGG +
Preference number: 4 (lower is better)
Translates to: GQGLADRRLPVFPWWLRAGSPSG*SFCCTR
Trigger: CCGTGTGCAGCAAAAGCTTCAACCGGAGGGAGAGCC...TGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp CAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGGACATGGGGCAGGGCTGCCACTaGCTTGGCGTGTTCCCCGTA +
Preference number: 4 (lower is better)
Translates to: QFLRGRLPCFTQANAWDMGQGCH*LGVFPV
Trigger: TACGGGGAACACGCCAAGGCAGTGGCAGCCCTGCCC...CATGTCCCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp CAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGGACATGCGTGGCCACAGGTGGTaGGTGGGCAGCCTTGTGTCG +
Preference number: 4 (lower is better)
Translates to: QFLRGRLPCFTQANAWDMRGHRW*VGSLVS
Trigger: CGACACAAGGCTGCCCACGCACCACCTGTGGCCACG...CATGTCCCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp AAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCATGGAAGGGAGTCTCGGGCCGAGCAGCAGCGGATaGGCGCTGAGAAGTGGGACA +
Preference number: 4 (lower is better)
Translates to: KASGVSMVAESIMEGSLGPSSSG*ALRSGT
Trigger: TGTCCCACTTCTCAGCGCGCATCCGCTGCTGCTCGG...CCCGAGACTCCCTTCCATGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp AAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCATGGAAGGGAGTCTCGGGGAAGACTGCGCGAAGTaGTTGGCGCACACGCCGCAC +
Preference number: 4 (lower is better)
Translates to: KASGVSMVAESIMEGSLGEDCAK*LAHTPH
Trigger: GTGCGGCGTGTGCGCCAAGCACTTCGCGCAGTCTTC...CCCGAGACTCCCTTCCATGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR GCA 90 bp CTCTCTATTCTGCACTCTGAAGTAGGCATCTTCCTGCATAGCCCTGGGCAATTCGGCCGAGCCACAGCGTaGAGCCGCCGGTGCTCCGCT +
Preference number: 4 (lower is better)
Translates to: LSILHSEVGIFLHSPGQFGRATA*SRRCSA
Trigger: AGCGGAGCACCGGCGGCTGCACGCTGTGGCTCGGCC...GAATTGCCCAGGGCTATGCAGGAAGATGCCTACTTCAGAGTGCAGAATAGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR GCA 90 bp CTAGCCGTTGTCATGTGTGTGGCCACAGCTGTCCAGGTCCTGCTAGCCTGCGTGGGTAGAAGAAGCCCTTaGCGCAGTGCTCACAGCGGT +
Preference number: 4 (lower is better)
Translates to: LAVVMCVATAVQVLLACVGRRSP*RSAHSG
Trigger: ACCGCTGTGAGCACTGCGGCAAGGGCTTCTTCTACC...CACGCAGGCTAGCAGGACCTGGACAGCTGTGGCCACACACATGACAACGGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp TGTGGCAAAGGCTTCACGCAGTCCTCTGTGCTGAGTGGTCATGCCCGCATCCACCTTGTCGTCCTTGGTTaGGTCGCAGGCTGCCCCTAC +
Preference number: 4 (lower is better)
Translates to: CGKGFTQSSVLSGHARIHLVVLG*VAGCPY
Trigger: GTAGGGGCAGCCTGCGACCCAACCAAGGACGACAAG...GTGGATGCGGGCATGACCACTCAGCACAGAGGACTGCGTGAAGCCTTTGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp CAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCACTGTGGCACTGGCTGTaGATACCGGGAGGCCCAGTG +
Preference number: 4 (lower is better)
Translates to: QGLADRRLPVFPWWLRASLWHWL*IPGGPV
Trigger: CACTGGGCCTCCCGGTATCCACAGCCAGTGCCACAG...TGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp CAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGGACATGCAGGCGTTGCAGGGGTaGCTGAGGGGCCAGAGGACA +
Preference number: 4 (lower is better)
Translates to: QFLRGRLPCFTQANAWDMQALQG*LRGQRT
Trigger: TGTCCTCTGGCCCCTCAGCCACCCCTGCAACGCCTG...CATGTCCCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp GCCCTGTGTCCTGCTGCCTTCCGTCTAGTCTCAGAGCTGCTGTTTCATGAGCATGCCACAGGTGGTGCGTaGGCAGCCTTGTGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: ALCPAAFRLVSELLFHEHATGGA*AALCRS
Trigger: GCTGCGACACAAGGCTGCCCACGCACCACCTGTGGC...ATGCTCATGAAACAGCAGCTCTGAGACTAGACGGAAGGCAGCAGGACACAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp AGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGGACATGGCAAATCCTGGGGAAGGGAGGTGGTaGCTGTGGGACCGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RGRLPCFTQANAWDMANPGEGRW*LWDRGS
Trigger: GCTGCCTCGGTCCCACAGCCACCACCTCCCTTCCCC...AGGATTTGCCATGTCCCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp CAAGTCATCTCTAAAGGGATGCTGGGATACCTTCCCCTCAAAACCGAGAGTACCTGGTCCCCTGGCCGGTaGCGAGGCCTGTGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: QVISKGMLGYLPLKTESTWSPGR*RGLWLR
Trigger: CCGGAGCCACAGGCCTCGCCACCGGCCAGGGGACCA...GGTACTCTCGGTTTTGAGGGGAAGGTATCCCAGCATCCCTTTAGAGATGACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CAA 72 bp GGGTGCTGTGGTAGGCAAGCCTTTCGCCTGCAGGTTTaGTGCCAAGCCCTTCCGACGCTCCTCAGATATGCG +
Preference number: 4 (lower is better)
Translates to: GCCGRQAFRLQV*CQALPTLLRYA
Trigger: CGCATATCTGAGGAGCGTCGGAAGGGCTTGGCACAAAACCTGCAGGCGAAAGGCTTGCCTACCACAGCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR TCA 90 bp AAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCATGGAAGGGAGTCTCGGGGGCTCTCCCTCCGGTTaGAGCTTTTGCTGCACACGG +
Preference number: 4 (lower is better)
Translates to: KASGVSMVAESIMEGSLGGSPSG*SFCCTR
Trigger: CCGTGTGCAGCAAAAGCTTCAACCGGAGGGAGAGCC...CCCGAGACTCCCTTCCATGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp GGGGTCTCAAATCAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATCACAGCAGAACGTCTTaGTGGGGCCGCCTGCGCCCG +
Preference number: 4 (lower is better)
Translates to: GVSNQFLRGRLPCFTQANHSRTS*WGRLRP
Trigger: CGGGCGCAGGCGGCCCCAGCAAGACGTTCTGCTGTG...ATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTGATTTGAGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp CAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCAACGCGCGCCCACAGATaGCACAGCAGAACGTCTTGC +
Preference number: 4 (lower is better)
Translates to: QGLADRRLPVFPWWLRASTRAHR*HSRTSC
Trigger: GCAAGACGTTCTGCTGTGGCATCTGTGGGCGCGCGT...TGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp AGTCTCCCTAGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCGGTAGCCGAAGACCTTaGCGCACAACTCGCACTTGT +
Preference number: 4 (lower is better)
Translates to: SLPSAQVRAWQTEGFRCFGSRRP*RTTRTC
Trigger: ACAAGTGCGAGTTGTGCGGCAAGGTCTTCGGCTACC...GAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCTAGGGAGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp CTGGTCCTGGGATGCCTACCCTCCAGTGCAGAAGATGCCCACCAAGTCATCTCTGTAGTCATATTGGGGTaGAGGAGGCTGGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LVLGCLPSSAEDAHQVISVVILG*RRLGWG
Trigger: CCCCCACCCCAGCCTCCTCCACCCCAATATGACTAC...AGAGATGACTTGGTGGGCATCTTCTGCACTGGAGGGTAGGCATCCCAGGACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp AAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCATGGAAGGGAGTCTCGGGCTTGTCGTCCTTGGTTaGGTCGCAGGCTGCCCCTAC +
Preference number: 4 (lower is better)
Translates to: KASGVSMVAESIMEGSLGLVVLG*VAGCPY
Trigger: GTAGGGGCAGCCTGCGACCCAACCAAGGACGACAAG...CCCGAGACTCCCTTCCATGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp CCTAGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTTCCAGTTGGTGTTGGTaGCACATCCTTGTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: PSAQVRAWQTEGFRCFHGSSWCW*HILVAA
Trigger: CGCTGCCACAAGGATGTGCCACCAACACCAACTGGA...ACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp GGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCATGGAAGGGGCGCTTCCCACACACTaGGCAGCGGAAACCCCGTTT +
Preference number: 4 (lower is better)
Translates to: GRQKASGVSMVAESIMEGALPTH*AAETPF
Trigger: AAACGGGGTTTCCGCTGCCCAGTGTGTGGGAAGCGC...CCCTTCCATGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp GGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCAGACCATAGGTGTTaGCGAAGCCCTCACCGCAGG +
Preference number: 4 (lower is better)
Translates to: GQGLADRRLPVFPWWLRASDHRC*RSPHRR
Trigger: CCTGCGGTGAGGGCTTCGCCAACACCTATGGTCTGA...TGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR TCA 90 bp CAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGGACATGCCTCCGCCTTGGGTTTaGAACTGGACTGGGGTGGGT +
Preference number: 4 (lower is better)
Translates to: QFLRGRLPCFTQANAWDMPPPWV*NWTGVG
Trigger: ACCCACCCCAGTCCAGTTTCAAACCCAAGGCGGAGG...CATGTCCCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR TCA 90 bp GAATTCCAGGAGAGCCAAGGGTTACATAGAGAGACCATGTCTCAAAAATGGGGGTACCGGGAGGCCCAGTaGAGGGAGTGCGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: EFQESQGLHRETMSQKWGYREAQ*RECGPR
Trigger: CCTGGGCCCGCACTCCCTTCACTGGGCCTCCCGGTA...CCCCCATTTTTGAGACATGGTCTCTCTATGTAACCCTTGGCTCTCCTGGAATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR TCA 90 bp CCTCAGGTATGCTCTCCCAGCCTACTGGAGTGTGAATGTCATGTCCGATCAATTCGTTGCAGGGGTGGCTaGGGGGCCAGAGGACACTGC +
Preference number: 4 (lower is better)
Translates to: PQVCSPSLLECECHVRSIRCRGG*GARGHC
Trigger: GCAGTGTCCTCTGGCCCCTCAGCCACCCCTGCAACG...AATTGATCGGACATGACATTCACACTCCAGTAGGCTGGGAGAGCATACCTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR TCA 90 bp CAAGTCATCTCTAAAGGGATGCTGGGATACCTTCCCCTCAAAACCGAGAGTACCGCGCCCGCAAAGCTCTaGCCGCAGAGGCCGCAACCA +
Preference number: 4 (lower is better)
Translates to: QVISKGMLGYLPLKTESTAPAKL*PQRPQP
Trigger: TGGTTGCGGCCTCTGCGGTCAGAGCTTTGCGGGCGC...GGTACTCTCGGTTTTGAGGGGAAGGTATCCCAGCATCCCTTTAGAGATGACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR GCA 90 bp ATTTGGAGGTCAGAGGGCATCTCAGGAAGTCAGTCAGTCTGTCTTTCCACCCTGGAGTGGAGGGGGAGGTaGCCCGAAGGTGGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: IWRSEGISGSQSVCLSTLEWRGR*PEGGWQ
Trigger: TTGCCACCCACCTTCGGGGCACCTCCCCCTCCACTC...CAGGGTGGAAAGACAGACTGACTGACTTCCTGAGATGCCCTCTGACCTCCAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR GCA 90 bp CAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCAAGGTTCCCGAACAGGTaGTGGTGTCCAGAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: QGLADRRLPVFPWWLRASRFPNR*WCPERS
Trigger: CGACCTCTCTGGACACCAGCACCTGTTCGGGAACCT...TGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp CCTCAGGTATGCTCTCCCAGCCTACTGGAGTGTGAATGTCATGTCCGATCAATTCCGGCCCACCTGAAGTaGCTGCAGCTCCGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: PQVCSPSLLECECHVRSIPAHLK*LQLRVH
Trigger: GTGGACCCGGAGCTGCAGGCACTTCAGGTGGGCCGG...AATTGATCGGACATGACATTCACACTCCAGTAGGCTGGGAGAGCATACCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp GTTCCTCAGGTATGCTCTCCCAGCCTACTGGAGTGTGAATGTCATGTCCGATCAGCGTGCAGCCGCCGGTaGTCCGCTAGGCTAGAAGAC +
Preference number: 4 (lower is better)
Translates to: VPQVCSPSLLECECHVRSACSRR*SARLED
Trigger: GTCTTCTAGCCTAGCGGAGCACCGGCGGCTGCACGC...TGATCGGACATGACATTCACACTCCAGTAGGCTGGGAGAGCATACCTGAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp GGAGAACGGCCTTACCGCTGTTCCCTCTGCCCACGGGCTTTTAAGGCCTTGGCAATGGGCTCAAAGCGCTaGTGGTTGAGGAATTCCAGG +
Preference number: 4 (lower is better)
Translates to: GERPYRCSLCPRAFKALAMGSKR*WLRNSR
Trigger: CCTGGAATTCCTCAACCACCAGCGCTTTGAGCCCAT...TGCCAAGGCCTTAAAAGCCCGTGGGCAGAGGGAACAGCGGTAAGGCCGTTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp CAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCACCCCGTATAGCTCCATaGGCTCAAAGCGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: QGLADRRLPVFPWWLRASPRIAP*AQSAGG
Trigger: ACCACCAGCGCTTTGAGCCCATGGAGCTATACGGGG...TGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp TCAAATCAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGGTGTGGATGCGCTCGTaGCGCTTCAGGGTCTCGCGG +
Preference number: 4 (lower is better)
Translates to: SNQFLRGRLPCFTQANAWVWMRS*RFRVSR
Trigger: CCGCGAGACCCTGAAGCGCCACGAGCGCATCCACAC...CCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTGATTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp GAATTCCAGGAGAGCCAAGGGTTACATAGAGAGACCATGTCTCAAAAATGGGGGGTCCACAGGCCCCAGTaGTCCCCTGGCCGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: EFQESQGLHRETMSQKWGVHRPQ*SPGRWR
Trigger: TCGCCACCGGCCAGGGGACCACTGGGGCCTGTGGAC...CCCCCATTTTTGAGACATGGTCTCTCTATGTAACCCTTGGCTCTCCTGGAATTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp GTTCCTCAGGTATGCTCTCCCAGCCTACTGGAGTGTGAATGTCATGTCCGATCACGTTGTCCAGCACGCTaGATGCATCGGTGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VPQVCSPSLLECECHVRSRCPAR*MHRCRR
Trigger: GCGGCGGCACCGATGCATCCAGCGTGCTGGACAACG...TGATCGGACATGACATTCACACTCCAGTAGGCTGGGAGAGCATACCTGAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp AGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCAAATGCTTGAAGCTTTaGCCGCATGTGGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: SAQVRAWQTEGFRCFHGGKCLKL*PHVAQL
Trigger: CAGCTGTGCCACATGCGGCCAAAGCTTCAAGCATTT...GCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CAA 72 bp TTCATGAGCATGGCCACCTGGCAAGCATGGAGGGGCTaGGGCAGGATGGGGATCCTAGCCGTTGTCATGTGT +
Preference number: 4 (lower is better)
Translates to: FMSMATWQAWRG*GRMGILAVVMC
Trigger: ACACATGACAACGGCTAGGATCCCCATCCTGCCCAAGCCCCTCCATGCTTGCCAGGTGGCCATGCTCATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR TCA 90 bp GGGGTCTCAAATCAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATTCCGGGGCAGCCTGGTaGACCAGCTTGTGCCACATG +
Preference number: 4 (lower is better)
Translates to: GVSNQFLRGRLPCFTQANSGAAW*TSLCHM
Trigger: CATGTGGCACAAGCTGGTTCACCAGGCTGCCCCGGA...ATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTGATTTGAGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR TCA 90 bp GTTCCTCAGGTATGCTCTCCCAGCCTACTGGAGTGTGAATGTCATGTCCGATCATCCGGGGCAGCCTGGTaGACCAGCTTGTGCCACATG +
Preference number: 4 (lower is better)
Translates to: VPQVCSPSLLECECHVRSSGAAW*TSLCHM
Trigger: CATGTGGCACAAGCTGGTTCACCAGGCTGCCCCGGA...TGATCGGACATGACATTCACACTCCAGTAGGCTGGGAGAGCATACCTGAGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp CCTCAGGTATGCTCTCCCAGCCTACTGGAGTGTGAATGTCATGTCCGATCAATTGGGCAGGGCTGCCACTaGCTTGGCGTGTTCCCCGTA +
Preference number: 4 (lower is better)
Translates to: PQVCSPSLLECECHVRSIGQGCH*LGVFPV
Trigger: TACGGGGAACACGCCAAGGCAGTGGCAGCCCTGCCC...AATTGATCGGACATGACATTCACACTCCAGTAGGCTGGGAGAGCATACCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp GGAGAACGGCCTTACCGCTGTTCCCTCTGCCCACGGGCTTTTAAGGCCTTGGCAGAGTGCACTAACATGTaGTGGACCAGATGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: GERPYRCSLCPRAFKALAECTNM*WTRCED
Trigger: GTCCTCACATCTGGTCCAGCACATGTTAGTGCACTC...TGCCAAGGCCTTAAAAGCCCGTGGGCAGAGGGAACAGCGGTAAGGCCGTTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR GCA 90 bp TCCGATGCATGCTCTGTGACCGCACTTTCAATAACTCCTCCAACTTCCGCAAACCGTGGCCACAGGTGGTaGGTGGGCAGCCTTGTGTCG +
Preference number: 4 (lower is better)
Translates to: SDACSVTALSITPPTSANRGHRW*VGSLVS
Trigger: CGACACAAGGCTGCCCACGCACCACCTGTGGCCACG...GTTTGCGGAAGTTGGAGGAGTTATTGAAAGTGCGGTCACAGAGCATGCATCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR GCA 90 bp CAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGGACATGGCACCACGTGGTGCTTaGTCAGATGGAAGGACTCCC +
Preference number: 4 (lower is better)
Translates to: QFLRGRLPCFTQANAWDMAPRGA*SDGRTP
Trigger: GGGAGTCCTTCCATCTGAGCAAGCACCACGTGGTGC...CATGTCCCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp TCAAATCAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGGGCAATTGGAGCCGATaGACCTGGCGGTGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: SNQFLRGRLPCFTQANAWGNWSR*TWRWRV
Trigger: CACACGCCACCGCCAGGTGCATCGGCTCCAATTGCC...CCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTGATTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp TCTCTGGGTAGTTATCCATTATCTGGAATGGTGAGTGACCAGGCTTGGGCTGTTCCGGCCCACCTGAAGTaGCTGCAGCTCCGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: SLGSYPLSGMVSDQAWAVPAHLK*LQLRVH
Trigger: GTGGACCCGGAGCTGCAGGCACTTCAGGTGGGCCGG...AACAGCCCAAGCCTGGTCACTCACCATTCCAGATAATGGATAACTACCCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR GCA 90 bp CAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGGACATGAAGAGATCCGGGAAGTaGTCCCCGCAGTCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: QFLRGRLPCFTQANAWDMKRSGK*SPQSEQ
Trigger: CTGCTCAGACTGCGGGGAGCACTTCCCGGATCTCTT...CATGTCCCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp CAAAGCAAGTCCATAGCTAGCCTAGACTACATGAGACCGTCTCCAGTAAGTCTGTGCACCACGCGGTGCTaGCGCAGGTACCAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: QSKSIASLDYMRPSPVSLCTTRC*RRYQER
Trigger: GCGCTCCTGGTACCTGCGGCAGCACCGCGTGGTGCA...CAGACTTACTGGAGACGGTCTCATGTAGTCTAGGCTAGCTATGGACTTGCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp TCCGATGCATGCTCTGTGACCGCACTTTCAATAACTCCTCCAACTTCCGCAAACGCCCTGGGGTCCCAGTaGGAGTGCCCAGTCCTGATG +
Preference number: 4 (lower is better)
Translates to: SDACSVTALSITPPTSANALGSQ*ECPVLM
Trigger: CATCAGGACTGGGCACTCCCACTGGGACCCCAGGGC...GTTTGCGGAAGTTGGAGGAGTTATTGAAAGTGCGGTCACAGAGCATGCATCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp TCAAATCAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGAGCCCTTGTCGTCCTTaGTTGGGTCGCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SNQFLRGRLPCFTQANAWSPCRP*LGRRLP
Trigger: GGGCAGCCTGCGACCCAACCAAGGACGACAAGGGCT...CCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTGATTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp AAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCATGGAAGGGAGTCTCGGGTGGATGATCTGGTGCTaGTGGAGGTGGCTAGGCTTC +
Preference number: 4 (lower is better)
Translates to: KASGVSMVAESIMEGSLGWMIWC*WRWLGF
Trigger: GAAGCCTAGCCACCTCCACCAGCACCAGATCATCCA...CCCGAGACTCCCTTCCATGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp GAATTCCAGGAGAGCCAAGGGTTACATAGAGAGACCATGTCTCAAAAATGGGGGGGGGAAGGGAGGTGGTaGCTGTGGGACCGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: EFQESQGLHRETMSQKWGGEGRW*LWDRGS
Trigger: GCTGCCTCGGTCCCACAGCCACCACCTCCCTTCCCC...CCCCCATTTTTGAGACATGGTCTCTCTATGTAACCCTTGGCTCTCCTGGAATTC
57% GC, longest homopolymer 9 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp CAAGTCATCTCTAAAGGGATGCTGGGATACCTTCCCCTCAAAACCGAGAGTACCGGTACAGGGCAGGGCTaGCACTGCCTTGGCGTGTTC +
Preference number: 4 (lower is better)
Translates to: QVISKGMLGYLPLKTESTGTGQG*HCLGVF
Trigger: GAACACGCCAAGGCAGTGGCAGCCCTGCCCTGTACC...GGTACTCTCGGTTTTGAGGGGAAGGTATCCCAGCATCCCTTTAGAGATGACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR GCA 90 bp AAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCATGGAAGGGAGTCTCGGGAGACATGGTTGTAGGTaGGGCCACAGATGCCGCATT +
Preference number: 4 (lower is better)
Translates to: KASGVSMVAESIMEGSLGRHGCR*GHRCRI
Trigger: AATGCGGCATCTGTGGCCGCACCTACAACCATGTCT...CCCGAGACTCCCTTCCATGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp GCCCTGTGTCCTGCTGCCTTCCGTCTAGTCTCAGAGCTGCTGTTTCATGAGCATGTGTGCACCACGTGGTaGTTGCTCAGATGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: ALCPAAFRLVSELLFHEHVCTTW*LLRWKD
Trigger: GTCCTTCCATCTGAGCAAGCACCACGTGGTGCACAC...ATGCTCATGAAACAGCAGCTCTGAGACTAGACGGAAGGCAGCAGGACACAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR GCA 90 bp GAATTCCAGGAGAGCCAAGGGTTACATAGAGAGACCATGTCTCAAAAATGGGGGCGGAAACCCCGTTTCTaGCGGTGGCTTCGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: EFQESQGLHRETMSQKWGRKPRF*RWLRRC
Trigger: GCACCGCCGAAGCCACCGGCAGAAACGGGGTTTCCG...CCCCCATTTTTGAGACATGGTCTCTCTATGTAACCCTTGGCTCTCCTGGAATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp CTAGCCTGCGTGCCCATTACAGCTTGCACACAGGAGAACGGCCTTACCGCTGTTGGCTCAAAGCGCTGGTaGTTGAGGAATTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LACVPITACTQENGLTAVGSKRW*LRNSRK
Trigger: CTTCCTGGAATTCCTCAACCACCAGCGCTTTGAGCC...AACAGCGGTAAGGCCGTTCTCCTGTGTGCAAGCTGTAATGGGCACGCAGGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp GAATTCCAGGAGAGCCAAGGGTTACATAGAGAGACCATGTCTCAAAAATGGGGGCTCCAGGCCCAGGGGTaGGCCCACCACGTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: EFQESQGLHRETMSQKWGLQAQG*AHHVSG
Trigger: ACCTGAAACGTGGTGGGCCCACCCCTGGGCCTGGAG...CCCCCATTTTTGAGACATGGTCTCTCTATGTAACCCTTGGCTCTCCTGGAATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp CTAGCCGTTGTCATGTGTGTGGCCACAGCTGTCCAGGTCCTGCTAGCCTGCGTGTGTTTGAAGGACTTCTaGCAAACACCACACGGGAAG +
Preference number: 4 (lower is better)
Translates to: LAVVMCVATAVQVLLACVCLKDF*QTPHGK
Trigger: CTTCCCGTGTGGTGTTTGCCAGAAGTCCTTCAAACA...CACGCAGGCTAGCAGGACCTGGACAGCTGTGGCCACACACATGACAACGGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp GGAGAACGGCCTTACCGCTGTTCCCTCTGCCCACGGGCTTTTAAGGCCTTGGCATGCACTAACATGTGCTaGACCAGATGTGAGGACTGT +
Preference number: 4 (lower is better)
Translates to: GERPYRCSLCPRAFKALACTNMC*TRCEDC
Trigger: ACAGTCCTCACATCTGGTCCAGCACATGTTAGTGCA...TGCCAAGGCCTTAAAAGCCCGTGGGCAGAGGGAACAGCGGTAAGGCCGTTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp AAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCATGGAAGGGAGTCTCGGGACCTCCAGTTGGTGTTaGTGGCACATCCTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: KASGVSMVAESIMEGSLGTSSWC*WHILVA
Trigger: TGCCACAAGGATGTGCCACCAACACCAACTGGAGGT...CCCGAGACTCCCTTCCATGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp CACTGGTCCTGGGATGCCTACCCTCCAGTGCAGAAGATGCCCACCAAGTCATCTTGGCGTACCTCCAGTTaGTGTTGGTGGCACATCCTT +
Preference number: 4 (lower is better)
Translates to: HWSWDAYPPVQKMPTKSSWRTSS*CWWHIL
Trigger: AAGGATGTGCCACCAACACCAACTGGAGGTACGCCA...AGATGACTTGGTGGGCATCTTCTGCACTGGAGGGTAGGCATCCCAGGACCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp GGGGTCTCAAATCAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGGTCAGAGCTGGCTGTaGCACTGGCTGTGGATACCG +
Preference number: 4 (lower is better)
Translates to: GVSNQFLRGRLPCFTQANGQSWL*HWLWIP
Trigger: CGGTATCCACAGCCAGTGCCACAGCCAGCTCTGACC...ATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTGATTTGAGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp AGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGGACATGGCAAATCCTGAGGGAGCAGGCAAATaGGCCATCACCGCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: RGRLPCFTQANAWDMANPEGAGK*AITASS
Trigger: ACTACTGGCGGTGATGGCCCATTTGCCTGCTCCCTC...AGGATTTGCCATGTCCCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp CAAAGCAAGTCCATAGCTAGCCTAGACTACATGAGACCGTCTCCAGTAAGTCTGCTCCGTGGCCACAGGTaGTGCGTGGGCAGCCTTGTG +
Preference number: 4 (lower is better)
Translates to: QSKSIASLDYMRPSPVSLLRGHR*CVGSLV
Trigger: CACAAGGCTGCCCACGCACCACCTGTGGCCACGGAG...CAGACTTACTGGAGACGGTCTCATGTAGTCTAGGCTAGCTATGGACTTGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR TCA 90 bp GGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCATGGAAGGGGTGCTGGACCAGATGTaGGGACTGTTTGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: GRQKASGVSMVAESIMEGVLDQM*GLFEGL
Trigger: AAGTCCTTCAAACAGTCCTCACATCTGGTCCAGCAC...CCCTTCCATGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR TCA 90 bp GAATTCCAGGAGAGCCAAGGGTTACATAGAGAGACCATGTCTCAAAAATGGGGGGGGCTGCCTGGTGCTTaGGGAGGTAGGAAGCATCGC +
Preference number: 4 (lower is better)
Translates to: EFQESQGLHRETMSQKWGGLPGA*GGRKHR
Trigger: GCGATGCTTCCTACCTCCTCAAGCACCAGGCAGCCC...CCCCCATTTTTGAGACATGGTCTCTCTATGTAACCCTTGGCTCTCCTGGAATTC
54% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp GTTCCTCAGGTATGCTCTCCCAGCCTACTGGAGTGTGAATGTCATGTCCGATCAGCACCACGTGGTGCTTaGTCAGATGGAAGGACTCCC +
Preference number: 4 (lower is better)
Translates to: VPQVCSPSLLECECHVRSAPRGA*SDGRTP
Trigger: GGGAGTCCTTCCATCTGAGCAAGCACCACGTGGTGC...TGATCGGACATGACATTCACACTCCAGTAGGCTGGGAGAGCATACCTGAGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp CAAAGCAAGTCCATAGCTAGCCTAGACTACATGAGACCGTCTCCAGTAAGTCTGGGCAATTGGAGCCGATaGACCTGGCGGTGGCGTGTG +
Preference number: 4 (lower is better)
Translates to: QSKSIASLDYMRPSPVSLGNWSR*TWRWRV
Trigger: CACACGCCACCGCCAGGTGCATCGGCTCCAATTGCC...CAGACTTACTGGAGACGGTCTCATGTAGTCTAGGCTAGCTATGGACTTGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp GTTGTGTGTACAACCAAAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCAGCGGAAGGGCCTaGCGCCCTGATGGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VVCTTKVCVCVCVCVCVCSSGRA*RPDGQP
Trigger: TGGCTGCCCATCAGGGCGGCAGGCCCTTCCGCTGCT...ACACACACACACACACACACACACACACACACAAACTTTGGTTGTACACACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp AGTCTCCCTAGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCTTCCAGGAAGTCAAATaGGTAACTCTGGAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: SLPSAQVRAWQTEGFRCFFQEVK*VTLEVD
Trigger: GTCCACTTCCAGAGTTACCCATTTGACTTCCTGGAA...GAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCTAGGGAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp TCCAGGAGAGCCAAGGGTTACATAGAGAGACCATGTCTCAAAAATGGGGGAAAAGCCCTGGGGTCCCAGTaGGAGTGCCCAGTCCTGATG +
Preference number: 4 (lower is better)
Translates to: SRRAKGYIERPCLKNGGKALGSQ*ECPVLM
Trigger: CATCAGGACTGGGCACTCCCACTGGGACCCCAGGGC...TTTTCCCCCATTTTTGAGACATGGTCTCTCTATGTAACCCTTGGCTCTCCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp CAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGGACATGTGGCGTACCTCCAGTTaGTGTTGGTGGCACATCCTT +
Preference number: 4 (lower is better)
Translates to: QFLRGRLPCFTQANAWDMWRTSS*CWWHIL
Trigger: AAGGATGTGCCACCAACACCAACTGGAGGTACGCCA...CATGTCCCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp CAAAGCAAGTCCATAGCTAGCCTAGACTACATGAGACCGTCTCCAGTAAGTCTGAGCTGGCTGTGGCACTaGCTGTGGATACCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: QSKSIASLDYMRPSPVSLSWLWH*LWIPGG
Trigger: GCCTCCCGGTATCCACAGCCAGTGCCACAGCCAGCT...CAGACTTACTGGAGACGGTCTCATGTAGTCTAGGCTAGCTATGGACTTGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp GGGGTCTCAAATCAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGAGGGAGCAGGCAAATaGGCCATCACCGCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: GVSNQFLRGRLPCFTQANEGAGK*AITASS
Trigger: ACTACTGGCGGTGATGGCCCATTTGCCTGCTCCCTC...ATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTGATTTGAGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp GGGGTCTCAAATCAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATCGGGTGTGCACCACGTaGTGCTTGCTCAGATGGAAG +
Preference number: 4 (lower is better)
Translates to: GVSNQFLRGRLPCFTQANRVCTT*CLLRWK
Trigger: CTTCCATCTGAGCAAGCACCACGTGGTGCACACCCG...ATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTGATTTGAGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR TCA 90 bp AGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGGACATGGCAAATCCTCTTCCTTGTGACTCATaGCGTGGAAGAGATCCGGGA +
Preference number: 4 (lower is better)
Translates to: RGRLPCFTQANAWDMANPLPCDS*RGRDPG
Trigger: TCCCGGATCTCTTCCACGTCATGAGTCACAAGGAAG...AGGATTTGCCATGTCCCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR TCA 90 bp CACCTGTCTCTTAGGAGCTATAGGCATTTAATGGTTGCCTGGAGAGGGGGAACCGGCCTAGGAAATGCTTaGAGCTTTGGCCGCATGTGG +
Preference number: 4 (lower is better)
Translates to: HLSLRSYRHLMVAWRGGTGLGNA*SFGRMW
Trigger: CCACATGCGGCCAAAGCTTCAAGCATTTCCTAGGCC...GGTTCCCCCTCTCCAGGCAACCATTAAATGCCTATAGCTCCTAAGAGACAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR GCA 90 bp TCAAATCAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGTCGACTATTCCCCATTaGGGAGCAGGGAAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SNQFLRGRLPCFTQANAWSTIPH*GAGKAA
Trigger: TGCTGCCTTCCCTGCTCCGCAATGGGGAATAGTCGA...CCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTGATTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp GTTCCTCAGGTATGCTCTCCCAGCCTACTGGAGTGTGAATGTCATGTCCGATCAGTGTGCACCACGTGGTaGTTGCTCAGATGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: VPQVCSPSLLECECHVRSVCTTW*LLRWKD
Trigger: GTCCTTCCATCTGAGCAAGCACCACGTGGTGCACAC...TGATCGGACATGACATTCACACTCCAGTAGGCTGGGAGAGCATACCTGAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp GTTAAGTTCCTCAGGTATGCTCTCCCAGCCTACTGGAGTGTGAATGTCATGTCCGCTAGGCTAGAAGACTaGGCGAAGTGCTTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: VKFLRYALPAYWSVNVMSARLED*AKCLAH
Trigger: GTGCGCCAAGCACTTCGCGCAGTCTTCTAGCCTAGC...GGACATGACATTCACACTCCAGTAGGCTGGGAGAGCATACCTGAGGAACTTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR GCA 90 bp GAAAATAAAAGACAGGAAAGTAAGACTGGCTTGTTGGCAAGAAAGGGCTCAGCAGGTAGCGGAAGGTCTTaGCGCAGGCGCCGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: ENKRQESKTGLLARKGSAGSGRS*RRRRSA
Trigger: AGCGCTGCGGCGCCTGCGGCAAGACCTTCCGCTACC...TGCTGAGCCCTTTCTTGCCAACAAGCCAGTCTTACTTTCCTGTCTTTTATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp GTTAAGTTCCTCAGGTATGCTCTCCCAGCCTACTGGAGTGTGAATGTCATGTCCCCCCGTATAGCTCCATaGGCTCAAAGCGCTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VKFLRYALPAYWSVNVMSPRIAP*AQSAGG
Trigger: ACCACCAGCGCTTTGAGCCCATGGAGCTATACGGGG...GGACATGACATTCACACTCCAGTAGGCTGGGAGAGCATACCTGAGGAACTTAAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp AAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCATGGAAGGGAGTCTCGGGTCCATCTTCTTGGCTTaGGAAGAGGATGAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: KASGVSMVAESIMEGSLGSIFLA*EEDEED
Trigger: GTCTTCCTCATCCTCTTCCCAAGCCAAGAAGATGGA...CCCGAGACTCCCTTCCATGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp AGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGGACATGGCAAATCCTACCTCCAGTTGGTGTTaGTGGCACATCCTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: RGRLPCFTQANAWDMANPTSSWC*WHILVA
Trigger: TGCCACAAGGATGTGCCACCAACACCAACTGGAGGT...AGGATTTGCCATGTCCCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp CAAGTCATCTCTAAAGGGATGCTGGGATACCTTCCCCTCAAAACCGAGAGTACCGATGCTCCAGCAGGTTaGAGCGGTAGCGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: QVISKGMLGYLPLKTESTDAPAG*SGSGRS
Trigger: AGACCTTCCGCTACCGCTCCAACCTGCTGGAGCATC...GGTACTCTCGGTTTTGAGGGGAAGGTATCCCAGCATCCCTTTAGAGATGACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
3UTR CAA 72 bp AACCTGGTTCTGGTCTCCCAGAAACCCATGCTACACTaGAGACTCAGGAAAGAGGTACTTGGGGTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: NLVLVSQKPMLH*RLRKEVLGVCG
Trigger: CCCACAGACCCCAAGTACCTCTTTCCTGAGTCTCAAGTGTAGCATGGGTTTCTGGGAGACCAGAACCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR TCA 90 bp ACCCAGATATATCTAAAAATACATAGACAGCTGGGCATGGTAAAGGCCTGTAATCCTGGCGGTGGCGTGTaGGGCTCTGCGGGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: TQIYLKIHRQLGMVKACNPGGGV*GSAGSR
Trigger: TCGGCTACCCGCAGAGCCTCACACGCCACCGCCAGG...ATTACAGGCCTTTACCATGCCCAGCTGTCTATGTATTTTTAGATATATCTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR TCA 90 bp GGGGTCTCAAATCAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATCTTCCTTGTGACTCATaGCGTGGAAGAGATCCGGGA +
Preference number: 4 (lower is better)
Translates to: GVSNQFLRGRLPCFTQANLPCDS*RGRDPG
Trigger: TCCCGGATCTCTTCCACGTCATGAGTCACAAGGAAG...ATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTGATTTGAGACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp TCAAATCAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGAGACATGGTTGTAGGTaGGGCCACAGATGCCGCATT +
Preference number: 4 (lower is better)
Translates to: SNQFLRGRLPCFTQANAWRHGCR*GHRCRI
Trigger: AATGCGGCATCTGTGGCCGCACCTACAACCATGTCT...CCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTGATTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp TCCAGGAGAGCCAAGGGTTACATAGAGAGACCATGTCTCAAAAATGGGGGAAAAACGCGCGCCCACAGATaGCACAGCAGAACGTCTTGC +
Preference number: 4 (lower is better)
Translates to: SRRAKGYIERPCLKNGGKTRAHR*HSRTSC
Trigger: GCAAGACGTTCTGCTGTGGCATCTGTGGGCGCGCGT...TTTTCCCCCATTTTTGAGACATGGTCTCTCTATGTAACCCTTGGCTCTCCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp TCTCTGGGTAGTTATCCATTATCTGGAATGGTGAGTGACCAGGCTTGGGCTGTTAAGAGATCCGGGAAGTaGTCCCCGCAGTCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: SLGSYPLSGMVSDQAWAVKRSGK*SPQSEQ
Trigger: CTGCTCAGACTGCGGGGAGCACTTCCCGGATCTCTT...AACAGCCCAAGCCTGGTCACTCACCATTCCAGATAATGGATAACTACCCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp GGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCATGGAAGGGTTCCAGGAAGTCAAATaGGTAACTCTGGAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: GRQKASGVSMVAESIMEGFQEVK*VTLEVD
Trigger: GTCCACTTCCAGAGTTACCCATTTGACTTCCTGGAA...CCCTTCCATGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp TCCAGGAGAGCCAAGGGTTACATAGAGAGACCATGTCTCAAAAATGGGGGAAAAGTAGTCATATTGGGGTaGAGGAGGCTGGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SRRAKGYIERPCLKNGGKVVILG*RRLGWG
Trigger: CCCCCACCCCAGCCTCCTCCACCCCAATATGACTAC...TTTTCCCCCATTTTTGAGACATGGTCTCTCTATGTAACCCTTGGCTCTCCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp GTTAAGTTCCTCAGGTATGCTCTCCCAGCCTACTGGAGTGTGAATGTCATGTCCTCCAGTTGGTGTTGGTaGCACATCCTTGTGGCAGCG +
Preference number: 4 (lower is better)
Translates to: VKFLRYALPAYWSVNVMSSSWCW*HILVAA
Trigger: CGCTGCCACAAGGATGTGCCACCAACACCAACTGGA...GGACATGACATTCACACTCCAGTAGGCTGGGAGAGCATACCTGAGGAACTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp TCCAGGAGAGCCAAGGGTTACATAGAGAGACCATGTCTCAAAAATGGGGGAAAAAGGTTCCCGAACAGGTaGTGGTGTCCAGAGAGGTCG +
Preference number: 4 (lower is better)
Translates to: SRRAKGYIERPCLKNGGKRFPNR*WCPERS
Trigger: CGACCTCTCTGGACACCAGCACCTGTTCGGGAACCT...TTTTCCCCCATTTTTGAGACATGGTCTCTCTATGTAACCCTTGGCTCTCCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp ACCCAGATATATCTAAAAATACATAGACAGCTGGGCATGGTAAAGGCCTGTAATCACAGCAGAACGTCTTaGTGGGGCCGCCTGCGCCCG +
Preference number: 4 (lower is better)
Translates to: TQIYLKIHRQLGMVKACNHSRTS*WGRLRP
Trigger: CGGGCGCAGGCGGCCCCAGCAAGACGTTCTGCTGTG...ATTACAGGCCTTTACCATGCCCAGCTGTCTATGTATTTTTAGATATATCTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR GCA 90 bp GCCTATCTGTACCTACAAAGCAAGTCCATAGCTAGCCTAGACTACATGAGACCGGGTAGCCGAAGACCTTaGCGCACAACTCGCACTTGT +
Preference number: 4 (lower is better)
Translates to: AYLYLQSKSIASLDYMRPGSRRP*RTTRTC
Trigger: ACAAGTGCGAGTTGTGCGGCAAGGTCTTCGGCTACC...CGGTCTCATGTAGTCTAGGCTAGCTATGGACTTGCTTTGTAGGTACAGATAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp GAAAATAAAAGACAGGAAAGTAAGACTGGCTTGTTGGCAAGAAAGGGCTCAGCAAGCCCTTGTCGTCCTTaGTTGGGTCGCAGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ENKRQESKTGLLARKGSASPCRP*LGRRLP
Trigger: GGGCAGCCTGCGACCCAACCAAGGACGACAAGGGCT...TGCTGAGCCCTTTCTTGCCAACAAGCCAGTCTTACTTTCCTGTCTTTTATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp GTTGTGTGTACAACCAAAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTCAGAGCTGGCTGTaGCACTGGCTGTGGATACCG +
Preference number: 4 (lower is better)
Translates to: VVCTTKVCVCVCVCVCVCGQSWL*HWLWIP
Trigger: CGGTATCCACAGCCAGTGCCACAGCCAGCTCTGACC...ACACACACACACACACACACACACACACACACAAACTTTGGTTGTACACACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp GCCTATCTGTACCTACAAAGCAAGTCCATAGCTAGCCTAGACTACATGAGACCGTGGATGATCTGGTGCTaGTGGAGGTGGCTAGGCTTC +
Preference number: 4 (lower is better)
Translates to: AYLYLQSKSIASLDYMRPWMIWC*WRWLGF
Trigger: GAAGCCTAGCCACCTCCACCAGCACCAGATCATCCA...CGGTCTCATGTAGTCTAGGCTAGCTATGGACTTGCTTTGTAGGTACAGATAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp GTTAAGTTCCTCAGGTATGCTCTCCCAGCCTACTGGAGTGTGAATGTCATGTCCGAGTGCACTAACATGTaGTGGACCAGATGTGAGGAC +
Preference number: 4 (lower is better)
Translates to: VKFLRYALPAYWSVNVMSECTNM*WTRCED
Trigger: GTCCTCACATCTGGTCCAGCACATGTTAGTGCACTC...GGACATGACATTCACACTCCAGTAGGCTGGGAGAGCATACCTGAGGAACTTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp CAAAGCAAGTCCATAGCTAGCCTAGACTACATGAGACCGTCTCCAGTAAGTCTGGGCTCAAAGCGCTGGTaGTTGAGGAATTCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QSKSIASLDYMRPSPVSLGSKRW*LRNSRK
Trigger: CTTCCTGGAATTCCTCAACCACCAGCGCTTTGAGCC...CAGACTTACTGGAGACGGTCTCATGTAGTCTAGGCTAGCTATGGACTTGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR TCA 90 bp CAAAGCAAGTCCATAGCTAGCCTAGACTACATGAGACCGTCTCCAGTAAGTCTGCAAAGCGCTGGTGGTTaGGGAATTCCAGGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: QSKSIASLDYMRPSPVSLQSAGG*GIPGSQ
Trigger: TTGACTTCCTGGAATTCCTCAACCACCAGCGCTTTG...CAGACTTACTGGAGACGGTCTCATGTAGTCTAGGCTAGCTATGGACTTGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR TCA 90 bp CCTCAGGTATGCTCTCCCAGCCTACTGGAGTGTGAATGTCATGTCCGATCAATTGATGTGAGGACTGTTTaGAGGACTTCTGGCAAACAC +
Preference number: 4 (lower is better)
Translates to: PQVCSPSLLECECHVRSIDVRTV*RTSGKH
Trigger: GTGTTTGCCAGAAGTCCTTCAAACAGTCCTCACATC...AATTGATCGGACATGACATTCACACTCCAGTAGGCTGGGAGAGCATACCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR TCA 90 bp GAATTCCAGGAGAGCCAAGGGTTACATAGAGAGACCATGTCTCAAAAATGGGGGGTGCTGGACCAGATGTaGGGACTGTTTGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: EFQESQGLHRETMSQKWGVLDQM*GLFEGL
Trigger: AAGTCCTTCAAACAGTCCTCACATCTGGTCCAGCAC...CCCCCATTTTTGAGACATGGTCTCTCTATGTAACCCTTGGCTCTCCTGGAATTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp TGTACAACCAAAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCACCAGGCCTAGGAAATaGTTGAAGCTTTGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: CTTKVCVCVCVCVCVCVRTRPRK*LKLWPH
Trigger: ATGCGGCCAAAGCTTCAAGCATTTCCTAGGCCTGGT...GCGCACACACACACACACACACACACACACACACACACAAACTTTGGTTGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp ACCCAGATATATCTAAAAATACATAGACAGCTGGGCATGGTAAAGGCCTGTAATCAGGAGGTAAGGACCTaGGGGGAAGGGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TQIYLKIHRQLGMVKACNQEVRT*GEGRWW
Trigger: CCACCACCTCCCTTCCCCCCAGGTCCTTACCTCCTG...ATTACAGGCCTTTACCATGCCCAGCTGTCTATGTATTTTTAGATATATCTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR TCA 90 bp TCCAGGAGAGCCAAGGGTTACATAGAGAGACCATGTCTCAAAAATGGGGGAAAACAAAGCGCTGGTGGTTaGGGAATTCCAGGAAGTCAA +
Preference number: 4 (lower is better)
Translates to: SRRAKGYIERPCLKNGGKQSAGG*GIPGSQ
Trigger: TTGACTTCCTGGAATTCCTCAACCACCAGCGCTTTG...TTTTCCCCCATTTTTGAGACATGGTCTCTCTATGTAACCCTTGGCTCTCCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR TCA 90 bp CAAAGCAAGTCCATAGCTAGCCTAGACTACATGAGACCGTCTCCAGTAAGTCTGGATGTGAGGACTGTTTaGAGGACTTCTGGCAAACAC +
Preference number: 4 (lower is better)
Translates to: QSKSIASLDYMRPSPVSLDVRTV*RTSGKH
Trigger: GTGTTTGCCAGAAGTCCTTCAAACAGTCCTCACATC...CAGACTTACTGGAGACGGTCTCATGTAGTCTAGGCTAGCTATGGACTTGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR GCA 90 bp GAAAATAAAAGACAGGAAAGTAAGACTGGCTTGTTGGCAAGAAAGGGCTCAGCATCGACTATTCCCCATTaGGGAGCAGGGAAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: ENKRQESKTGLLARKGSASTIPH*GAGKAA
Trigger: TGCTGCCTTCCCTGCTCCGCAATGGGGAATAGTCGA...TGCTGAGCCCTTTCTTGCCAACAAGCCAGTCTTACTTTCCTGTCTTTTATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CCA 90 bp CAAAGCAAGTCCATAGCTAGCCTAGACTACATGAGACCGTCTCCAGTAAGTCTGTGTTTGAAGGACTTCTaGCAAACACCACACGGGAAG +
Preference number: 4 (lower is better)
Translates to: QSKSIASLDYMRPSPVSLCLKDF*QTPHGK
Trigger: CTTCCCGTGTGGTGTTTGCCAGAAGTCCTTCAAACA...CAGACTTACTGGAGACGGTCTCATGTAGTCTAGGCTAGCTATGGACTTGCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp GCCTATCTGTACCTACAAAGCAAGTCCATAGCTAGCCTAGACTACATGAGACCGTGCACTAACATGTGCTaGACCAGATGTGAGGACTGT +
Preference number: 4 (lower is better)
Translates to: AYLYLQSKSIASLDYMRPCTNMC*TRCEDC
Trigger: ACAGTCCTCACATCTGGTCCAGCACATGTTAGTGCA...CGGTCTCATGTAGTCTAGGCTAGCTATGGACTTGCTTTGTAGGTACAGATAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CCA 90 bp TCCAGGAGAGCCAAGGGTTACATAGAGAGACCATGTCTCAAAAATGGGGGAAAATCCATCTTCTTGGCTTaGGAAGAGGATGAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: SRRAKGYIERPCLKNGGKSIFLA*EEDEED
Trigger: GTCTTCCTCATCCTCTTCCCAAGCCAAGAAGATGGA...TTTTCCCCCATTTTTGAGACATGGTCTCTCTATGTAACCCTTGGCTCTCCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 90 bp CCGGCCCACCTGAAGTGCCTGCAGCTCCGGGTCCACAGGCCCCAGTaGTCCCCTGGCCGGTGGCGAGGCCTGTGGCTCCGGCCAGGGCGC +
Preference number: 5 (lower is better)
Translates to: PAHLKCLQLRVHRPQ*SPGRWRGLWLRPGR
Trigger: GCGCCCTGGCCGGAGCCACAGGCCTCGCCACCGGCCAGGGGACCACTGGGGCCTGTGGACCCGGAGCTGCAGGCACTTCAGGTGGGCCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 90 bp CGGGTCCACAGGCCCCAGTGGTCCCCTGGCCGGTGGCGAGGCCTGTaGCTCCGGCCAGGGCGCAGGGCAATTGGAGCCGATGCACCTGGC +
Preference number: 5 (lower is better)
Translates to: RVHRPQWSPGRWRGL*LRPGRRAIGADAPG
Trigger: GCCAGGTGCATCGGCTCCAATTGCCCTGCGCCCTGGCCGGAGCCACAGGCCTCGCCACCGGCCAGGGGACCACTGGGGCCTGTGGACCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 90 bp CGCGCGCCCACAGATGCCACAGCAGAACGTCTTGCTGGGGCCGCCTaGGCCCGGGCCTCCAGCACCACCATTCCCCGCACCGCCGAGCAG +
Preference number: 5 (lower is better)
Translates to: RAPTDATAERLAGAA*ARASSTTIPRTAEQ
Trigger: CTGCTCGGCGGTGCGGGGAATGGTGGTGCTGGAGGCCCGGGCGCAGGCGGCCCCAGCAAGACGTTCTGCTGTGGCATCTGTGGGCGCGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 90 bp CGTGGCGCTTCAGGGTCTCGCGGCGCCCAAACGCGCGCCCACAGATaGCACAGCAGAACGTCTTGCTGGGGCCGCCTGCGCCCGGGCCTC +
Preference number: 5 (lower is better)
Translates to: RGASGSRGAQTRAHR*HSRTSCWGRLRPGL
Trigger: GAGGCCCGGGCGCAGGCGGCCCCAGCAAGACGTTCTGCTGTGGCATCTGTGGGCGCGCGTTTGGGCGCCGCGAGACCCTGAAGCGCCACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 90 bp CCCGCACAGGTCGCAGGGGTACACCGGCCGCGGAGTCCCGGCCGCTaGGTGGGCTGCCTGGTGCTTGAGGAGGTAGGAAGCATCGCGGAA +
Preference number: 5 (lower is better)
Translates to: PAQVAGVHRPRSPGR*VGCLVLEEVGSIAE
Trigger: TTCCGCGATGCTTCCTACCTCCTCAAGCACCAGGCAGCCCACGCAGCGGCCGGGACTCCGCGGCCGGTGTACCCCTGCGACCTGTGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 90 bp CGCAGTCTGAGCAGGCATAGCTCAGGTCGGCCGGCCCACCTGAAGTaGCTGCAGCTCCGGGTCCACAGGCCCCAGTGGTCCCCTGGCCGG +
Preference number: 5 (lower is better)
Translates to: RSLSRHSSGRPAHLK*LQLRVHRPQWSPGR
Trigger: CCGGCCAGGGGACCACTGGGGCCTGTGGACCCGGAGCTGCAGGCACTTCAGGTGGGCCGGCCGACCTGAGCTATGCCTGCTCAGACTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 90 bp CGGTGCCGCCGCCGCTGCTGCCGCCATCAGAAGACTGGGGGCCACTaGGTGTTGGCGCTAGAAGGCGCTCCGGGGCAGCCTGGTGAACCA +
Preference number: 5 (lower is better)
Translates to: RCRRRCCRHQKTGGH*VLALEGAPGQPGEP
Trigger: TGGTTCACCAGGCTGCCCCGGAGCGCCTTCTAGCGCCAACACCCAGTGGCCCCCAGTCTTCTGATGGCGGCAGCAGCGGCGGCGGCACCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 90 bp CTGGATGCATCGGTGCCGCCGCCGCTGCTGCCGCCATCAGAAGACTaGGGGCCACTGGGTGTTGGCGCTAGAAGGCGCTCCGGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LDASVPPPLLPPSED*GPLGVGARRRSGAA
Trigger: GGCTGCCCCGGAGCGCCTTCTAGCGCCAACACCCAGTGGCCCCCAGTCTTCTGATGGCGGCAGCAGCGGCGGCGGCACCGATGCATCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 90 bp GTCGCAGGGGTACACCGGCCGCGGAGTCCCGGCCGCTGCGTGGGCTaGCTGGTGCTTGAGGAGGTAGGAAGCATCGCGGAAGACCTTGCC +
Preference number: 5 (lower is better)
Translates to: VAGVHRPRSPGRCVG*LVLEEVGSIAEDLA
Trigger: GGCAAGGTCTTCCGCGATGCTTCCTACCTCCTCAAGCACCAGGCAGCCCACGCAGCGGCCGGGACTCCGCGGCCGGTGTACCCCTGCGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 90 bp CCACCTCTCCGGCCAGTCCGTTGTCCAGCACGCTGGATGCATCGGTaGCGCCGCCGCTGCTGCCGCCATCAGAAGACTGGGGGCCACTGG +
Preference number: 5 (lower is better)
Translates to: PPLRPVRCPARWMHR*RRRCCRHQKTGGHW
Trigger: CCAGTGGCCCCCAGTCTTCTGATGGCGGCAGCAGCGGCGGCGGCACCGATGCATCCAGCGTGCTGGACAACGGACTGGCCGGAGAGGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS GCA 90 bp AGCCGTCCCCACCTCTCCGGCCAGTCCGTTGTCCAGCACGCTGGATaGATCGGTGCCGCCGCCGCTGCTGCCGCCATCAGAAGACTGGGG +
Preference number: 5 (lower is better)
Translates to: SRPHLSGQSVVQHAG*IGAAAAAAAIRRLG
Trigger: CCCCAGTCTTCTGATGGCGGCAGCAGCGGCGGCGGCACCGATGCATCCAGCGTGCTGGACAACGGACTGGCCGGAGAGGTGGGGACGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS CCA 90 bp AGGGGCCAGAGGACACTGCGGCGGGGTCAGAGCTGGCTGTGGCACTaGCTGTGGATACCGGGAGGCCCAGTGAAGGGAGTGCGGGCCCAG +
Preference number: 5 (lower is better)
Translates to: RGQRTLRRGQSWLWH*LWIPGGPVKGVRAQ
Trigger: CTGGGCCCGCACTCCCTTCACTGGGCCTCCCGGTATCCACAGCCAGTGCCACAGCCAGCTCTGACCCCGCCGCAGTGTCCTCTGGCCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 90 bp GTGGTGGCTGTGGGACCGAGGCAGCCCCGTCCTTTGCCGGCTCCGTaGCCACAGGTGGTGCGTGGGCAGCCTTGTGTCGCAGCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: VVAVGPRQPRPLPAP*PQVVRGQPCVAAGS
Trigger: AGAGCCTGCTGCGACACAAGGCTGCCCACGCACCACCTGTGGCCACGGAGCCGGCAAAGGACGGGGCTGCCTCGGTCCCACAGCCACCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS TCA 90 bp CAGCACCACCATTCCCCGCACCGCCGAGCAGCAGCGGATGCGCGCTaGGAAGTGGGACAGGCACCGCACCATACACCACAGCCGCTGCGG +
Preference number: 5 (lower is better)
Translates to: QHHHSPHRRAAADAR*EVGQAPHHTPQPLR
Trigger: CCGCAGCGGCTGTGGTGTATGGTGCGGTGCCTGTCCCACTTCTCAGCGCGCATCCGCTGCTGCTCGGCGGTGCGGGGAATGGTGGTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 90 bp CAACCTCTCCGGCCAGTCCGTTGTCCAGCACGCTGGATGCATCGGTaGCGCCGCCGCTGCTGCCGCCATCAGAAGACTGGGGGCCACTGG +
Preference number: 5 (lower is better)
Translates to: QPLRPVRCPARWMHR*RRRCCRHQKTGGHW
Trigger: CCAGTGGCCCCCAGTCTTCTGATGGCGGCAGCAGCGGCGGCGGCACCGATGCATCCAGCGTGCTGGACAACGGACTGGCCGGAGAGGTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000085427.6
CDS CCA 90 bp CAGAGGACACTGCGGCGGGGTCAGAGCTGGCTGTGGCACTGGCTGTaGATACCGGGAGGCCCAGTGAAGGGAGTGCGGGCCCAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: QRTLRRGQSWLWHWL*IPGGPVKGVRAQAV
Trigger: CACAGCCTGGGCCCGCACTCCCTTCACTGGGCCTCCCGGTATCCACAGCCAGTGCCACAGCCAGCTCTGACCCCGCCGCAGTGTCCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 90 bp TGGCTGAGGGGCCAGAGGACACTGCGGCGGGGTCAGAGCTGGCTGTaGCACTGGCTGTGGATACCGGGAGGCCCAGTGAAGGGAGTGCGG +
Preference number: 5 (lower is better)
Translates to: WLRGQRTLRRGQSWL*HWLWIPGGPVKGVR
Trigger: CCGCACTCCCTTCACTGGGCCTCCCGGTATCCACAGCCAGTGCCACAGCCAGCTCTGACCCCGCCGCAGTGTCCTCTGGCCCCTCAGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 90 bp ACCATTCCCCGCACCGCCGAGCAGCAGCGGATGCGCGCTGAGAAGTaGGACAGGCACCGCACCATACACCACAGCCGCTGCGGCCGCTGT +
Preference number: 5 (lower is better)
Translates to: TIPRTAEQQRMRAEK*DRHRTIHHSRCGRC
Trigger: ACAGCGGCCGCAGCGGCTGTGGTGTATGGTGCGGTGCCTGTCCCACTTCTCAGCGCGCATCCGCTGCTGCTCGGCGGTGCGGGGAATGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 90 bp CCACAGCCGTCCCCACCTCTCCGGCCAGTCCGTTGTCCAGCACGCTaGATGCATCGGTGCCGCCGCCGCTGCTGCCGCCATCAGAAGACT +
Preference number: 5 (lower is better)
Translates to: PQPSPPLRPVRCPAR*MHRCRRRCCRHQKT
Trigger: AGTCTTCTGATGGCGGCAGCAGCGGCGGCGGCACCGATGCATCCAGCGTGCTGGACAACGGACTGGCCGGAGAGGTGGGGACGGCTGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS TCA 90 bp ACACCGGCCGCGGAGTCCCGGCCGCTGCGTGGGCTGCCTGGTGCTTaGGGAGGTAGGAAGCATCGCGGAAGACCTTGCCACAGATGCCAC +
Preference number: 5 (lower is better)
Translates to: TPAAESRPLRGLPGA*GGRKHRGRPCHRCH
Trigger: GTGGCATCTGTGGCAAGGTCTTCCGCGATGCTTCCTACCTCCTCAAGCACCAGGCAGCCCACGCAGCGGCCGGGACTCCGCGGCCGGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS TCA 90 bp TGGCTTCGGCGGTGCAGGAGCAGATCGTACGCGCCCGCAAAGCTCTaGCCGCAGAGGCCGCAACCAAGGGTCCGGCGCACCAGGTGCACA +
Preference number: 5 (lower is better)
Translates to: WLRRCRSRSYAPAKL*PQRPQPRVRRTRCT
Trigger: TGTGCACCTGGTGCGCCGGACCCTTGGTTGCGGCCTCTGCGGTCAGAGCTTTGCGGGCGCGTACGATCTGCTCCTGCACCGCCGAAGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS GCA 90 bp CCAGTCCGTTGTCCAGCACGCTGGATGCATCGGTGCCGCCGCCGCTaGTGCCGCCATCAGAAGACTGGGGGCCACTGGGTGTTGGCGCTA +
Preference number: 5 (lower is better)
Translates to: PVRCPARWMHRCRRR*CRHQKTGGHWVLAL
Trigger: TAGCGCCAACACCCAGTGGCCCCCAGTCTTCTGATGGCGGCAGCAGCGGCGGCGGCACCGATGCATCCAGCGTGCTGGACAACGGACTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS TCA 90 bp CCAGGGCGCAGGGCAATTGGAGCCGATGCACCTGGCGGTGGCGTGTaGGGCTCTGCGGGTAGCCGAAGACCTTGCCGCACAACTCGCACT +
Preference number: 5 (lower is better)
Translates to: PGRRAIGADAPGGGV*GSAGSRRPCRTTRT
Trigger: AGTGCGAGTTGTGCGGCAAGGTCTTCGGCTACCCGCAGAGCCTCACACGCCACCGCCAGGTGCATCGGCTCCAATTGCCCTGCGCCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 90 bp CACAGGTGGTGCGTGGGCAGCCTTGTGTCGCAGCAGGCTCTGCGGTaGGGAGTATGTTTTCCCGCACAGGTCGCAGGGGTACACCGGCCG +
Preference number: 5 (lower is better)
Translates to: HRWCVGSLVSQQALR*GVCFPAQVAGVHRP
Trigger: CGGCCGGTGTACCCCTGCGACCTGTGCGGGAAAACATACTCCGCACCGCAGAGCCTGCTGCGACACAAGGCTGCCCACGCACCACCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 90 bp GGGCTCGCTGATGGCGTAACACGGAGCTCAGGTAGAAGAAGCCCTTaGCGCAGTGCTCACAGCGGTAGGCGCGCTCGCCCAGGTGCAGCC +
Preference number: 5 (lower is better)
Translates to: GLADGVTRSSGRRSP*RSAHSGRRARPGAA
Trigger: GGCTGCACCTGGGCGAGCGCGCCTACCGCTGTGAGCACTGCGGCAAGGGCTTCTTCTACCTGAGCTCCGTGTTACGCCATCAGCGAGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS TCA 90 bp GTCAGAGCTGGCTGTGGCACTGGCTGTGGATACCGGGAGGCCCAGTaGAGGGAGTGCGGGCCCAGGCTGTGGCGTACCTCCAGTTGGTGT +
Preference number: 5 (lower is better)
Translates to: VRAGCGTGCGYREAQ*RECGPRLWRTSSWC
Trigger: ACACCAACTGGAGGTACGCCACAGCCTGGGCCCGCACTCCCTTCACTGGGCCTCCCGGTATCCACAGCCAGTGCCACAGCCAGCTCTGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 90 bp CAGCCTTCGGAAATAGCCCTTGTCGTCCTTGGTTGGGTCGCAGGCTaGCCCTACTGCGGGCCCAGGCGGGGTCTGCGAGGGTGTGGTAAG +
Preference number: 5 (lower is better)
Translates to: QPSEIALVVLGWVAG*PYCGPRRGLRGCGK
Trigger: CTTACCACACCCTCGCAGACCCCGCCTGGGCCCGCAGTAGGGGCAGCCTGCGACCCAACCAAGGACGACAAGGGCTATTTCCGAAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 90 bp GTGGCCACAGGTGGTGCGTGGGCAGCCTTGTGTCGCAGCAGGCTCTaGGGTGCGGAGTATGTTTTCCCGCACAGGTCGCAGGGGTACACC +
Preference number: 5 (lower is better)
Translates to: VATGGAWAALCRSRL*GAEYVFPHRSQGYT
Trigger: GGTGTACCCCTGCGACCTGTGCGGGAAAACATACTCCGCACCGCAGAGCCTGCTGCGACACAAGGCTGCCCACGCACCACCTGTGGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp TGTGGCAAAGGCTTCACGCAGTCCTCTGTGCTGAGTGGTCATGCCCGCATCCACTGGAGGTGGCAGGCGTaGCAGGGGTGGCTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: CGKGFTQSSVLSGHARIHWRWQA*QGWLRG
Trigger: GCCCCTCAGCCACCCCTGCAACGCCTGCCACCTCCA...GTGGATGCGGGCATGACCACTCAGCACAGAGGACTGCGTGAAGCCTTTGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CAA 90 bp GGAGAACGGCCTTACCGCTGTTCCCTCTGCCCACGGGCTTTTAAGGCCTTGGCACAGGGCGCAGGGCAATaGGAGCCGATGCACCTGGCG +
Preference number: 5 (lower is better)
Translates to: GERPYRCSLCPRAFKALAQGAGQ*EPMHLA
Trigger: CGCCAGGTGCATCGGCTCCAATTGCCCTGCGCCCTG...TGCCAAGGCCTTAAAAGCCCGTGGGCAGAGGGAACAGCGGTAAGGCCGTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS CCA 90 bp GGCCCAGGGGTGGGCCCACCACGTTTCAGGTTCCCGAACAGGTGCTaGTGTCCAGAGAGGTCGACTATTCCCCATTGCGGAGCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: GPGVGPPRFRFPNRC*CPERSTIPHCGAGK
Trigger: CTTCCCTGCTCCGCAATGGGGAATAGTCGACCTCTCTGGACACCAGCACCTGTTCGGGAACCTGAAACGTGGTGGGCCCACCCCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 90 bp CATCAGGTACTTCAGCCTTCGGAAATAGCCCTTGTCGTCCTTGGTTaGGTCGCAGGCTGCCCCTACTGCGGGCCCAGGCGGGGTCTGCGA +
Preference number: 5 (lower is better)
Translates to: HQVLQPSEIALVVLG*VAGCPYCGPRRGLR
Trigger: TCGCAGACCCCGCCTGGGCCCGCAGTAGGGGCAGCCTGCGACCCAACCAAGGACGACAAGGGCTATTTCCGAAGGCTGAAGTACCTGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 90 bp GCTCCATCAGGTACTTCAGCCTTCGGAAATAGCCCTTGTCGTCCTTaGTTGGGTCGCAGGCTGCCCCTACTGCGGGCCCAGGCGGGGTCT +
Preference number: 5 (lower is better)
Translates to: APSGTSAFGNSPCRP*LGRRLPLLRAQAGS
Trigger: AGACCCCGCCTGGGCCCGCAGTAGGGGCAGCCTGCGACCCAACCAAGGACGACAAGGGCTATTTCCGAAGGCTGAAGTACCTGATGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp AGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTCTCCGGCCAGTCCGTaGTCCAGCACGCTGGATGCA +
Preference number: 5 (lower is better)
Translates to: SAQVRAWQTEGFRCFHGGSPASP*SSTLDA
Trigger: TGCATCCAGCGTGCTGGACAACGGACTGGCCGGAGA...GCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS TCA 90 bp GGGCCACTGGGTGTTGGCGCTAGAAGGCGCTCCGGGGCAGCCTGGTaGACCAGCTTGTGCCACATGAGGTTCTCGATGAAACCGAACGTC +
Preference number: 5 (lower is better)
Translates to: GPLGVGARRRSGAAW*TSLCHMRFSMKPNV
Trigger: GACGTTCGGTTTCATCGAGAACCTCATGTGGCACAAGCTGGTTCACCAGGCTGCCCCGGAGCGCCTTCTAGCGCCAACACCCAGTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp AGTCTCCCTAGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCGGGTGGGTAGTCATATaGGGGTGGAGGAGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: SLPSAQVRAWQTEGFRCFGWVVI*GWRRLG
Trigger: CCCCAGCCTCCTCCACCCCAATATGACTACCCACCC...GAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCTAGGGAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp GGAGAACGGCCTTACCGCTGTTCCCTCTGCCCACGGGCTTTTAAGGCCTTGGCAGCCTCCGCCTTGGGTTaGAAACTGGACTGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: GERPYRCSLCPRAFKALAASALG*KLDWGG
Trigger: CCCACCCCAGTCCAGTTTCAAACCCAAGGCGGAGGC...TGCCAAGGCCTTAAAAGCCCGTGGGCAGAGGGAACAGCGGTAAGGCCGTTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CAA 90 bp GGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCATGGAAGGGGGTGCGTGGGCAGCCTaGTGTCGCAGCAGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: GRQKASGVSMVAESIMEGGAWAA*CRSRLC
Trigger: GCAGAGCCTGCTGCGACACAAGGCTGCCCACGCACC...CCCTTCCATGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 90 bp CCATTGCGGAGCAGGGAAGGCAGCATCAAAGAGTGGAGGGGGAGGTaGCCCGAAGGTGGGTGGCAAAGGCGGATCCATCTTCTTGGCTTG +
Preference number: 5 (lower is better)
Translates to: PLRSREGSIKEWRGR*PEGGWQRRIHLLGL
Trigger: CAAGCCAAGAAGATGGATCCGCCTTTGCCACCCACCTTCGGGGCACCTCCCCCTCCACTCTTTGATGCTGCCTTCCCTGCTCCGCAATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp GGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCAGCATCGCGGAAGACCTaGCCACAGATGCCACAGGGC +
Preference number: 5 (lower is better)
Translates to: GQGLADRRLPVFPWWLRAASRKT*PQMPQG
Trigger: GCCCTGTGGCATCTGTGGCAAGGTCTTCCGCGATGC...TGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp GCCCTGTGTCCTGCTGCCTTCCGTCTAGTCTCAGAGCTGCTGTTTCATGAGCATGGTGCGTGGGCAGCCTaGTGTCGCAGCAGGCTCTGC +
Preference number: 5 (lower is better)
Translates to: ALCPAAFRLVSELLFHEHGAWAA*CRSRLC
Trigger: GCAGAGCCTGCTGCGACACAAGGCTGCCCACGCACC...ATGCTCATGAAACAGCAGCTCTGAGACTAGACGGAAGGCAGCAGGACACAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS TCA 90 bp ATGCCACAGGGCAGGCGCAGCAAGTCGGCCGAGTGCGTTTTCACGTaGCGTTTGAGGCTCTCCCTCCGGTTGAAGCTTTTGCTGCACACG +
Preference number: 5 (lower is better)
Translates to: MPQGRRSKSAECVFT*RLRLSLRLKLLLHT
Trigger: CGTGTGCAGCAAAAGCTTCAACCGGAGGGAGAGCCTCAAACGTCACGTGAAAACGCACTCGGCCGACTTGCTGCGCCTGCCCTGTGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp AGTCTCCCTAGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCGAAGGAGCCTCCGCCTaGGGTTTGAAACTGGACTGG +
Preference number: 5 (lower is better)
Translates to: SLPSAQVRAWQTEGFRCFEGASA*GLKLDW
Trigger: CCAGTCCAGTTTCAAACCCAAGGCGGAGGCTCCTTC...GAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCTAGGGAGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp AGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCAGGTGGCTAGGCTTCTaGAAGACCTTCCAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: SAQVRAWQTEGFRCFHGGRWLGF*KTFQQR
Trigger: CCTCTGCTGGAAGGTCTTCAAGAAGCCTAGCCACCT...GCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp CAAGCCCTTCCGACGCTCCTCAGATATGCGAGACCACGAGCGGGTGCATACAGGCTCCGGTTGAAGCTTTaGCTGCACACGGAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: QALPTLLRYARPRAGAYRLRLKL*LHTEQE
Trigger: CTCCTGCTCCGTGTGCAGCAAAAGCTTCAACCGGAG...CCTGTATGCACCCGCTCGTGGTCTCGCATATCTGAGGAGCGTCGGAAGGGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CAA 90 bp CTCCCTAGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATATGAAACCGAACGTCTaGCCGCAGGCGTCACAGCCA +
Preference number: 5 (lower is better)
Translates to: LPSAQVRAWQTEGFRCFHMKPNV*PQASQP
Trigger: TGGCTGTGACGCCTGCGGCAAGACGTTCGGTTTCAT...ATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCTAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS TCA 90 bp CAGTTGGTGTTGGTGGCACATCCTTGTGGCAGCGTCGGTGGCGGATaGGACTGGAGACATGGTTGTAGGTGCGGCCACAGATGCCGCATT +
Preference number: 5 (lower is better)
Translates to: QLVLVAHPCGSVGGG*DWRHGCRCGHRCRI
Trigger: AATGCGGCATCTGTGGCCGCACCTACAACCATGTCTCCAGTCTCATCCGCCACCGACGCTGCCACAAGGATGTGCCACCAACACCAACTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 90 bp CATGGGCTCAAAGCGCTGGTGGTTGAGGAATTCCAGGAAGTCAAATaGGTAACTCTGGAAGTGGACCCCGTCCTCGCCCCCGATGCCGCT +
Preference number: 5 (lower is better)
Translates to: HGLKALVVEEFQEVK*VTLEVDPVLAPDAA
Trigger: AGCGGCATCGGGGGCGAGGACGGGGTCCACTTCCAGAGTTACCCATTTGACTTCCTGGAATTCCTCAACCACCAGCGCTTTGAGCCCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp AGTCTCCCTAGCGCCCAGGTCAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCGGCGGATCCATCTTCTaGGCTTGGGAAGAGGATGAG +
Preference number: 5 (lower is better)
Translates to: SLPSAQVRAWQTEGFRCFGGSIF*AWEEDE
Trigger: CTCATCCTCTTCCCAAGCCAAGAAGATGGATCCGCC...GAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTGACCTGGGCGCTAGGGAGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp GGGGTCTCAAATCAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATCAGGGCGCAGGGCAATaGGAGCCGATGCACCTGGCG +
Preference number: 5 (lower is better)
Translates to: GVSNQFLRGRLPCFTQANQGAGQ*EPMHLA
Trigger: CGCCAGGTGCATCGGCTCCAATTGCCCTGCGCCCTG...ATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTGATTTGAGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS TCA 90 bp CAGAGGCCGCAACCAAGGGTCCGGCGCACCAGGTGCACATACTTATaGGTCACCAGGCCTAGGAAATGCTTGAAGCTTTGGCCGCATGTG +
Preference number: 5 (lower is better)
Translates to: QRPQPRVRRTRCTYL*VTRPRKCLKLWPHV
Trigger: CACATGCGGCCAAAGCTTCAAGCATTTCCTAGGCCTGGTGACTCATAAGTATGTGCACCTGGTGCGCCGGACCCTTGGTTGCGGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CAA 90 bp CTAGCCTGCGTGCCCATTACAGCTTGCACACAGGAGAACGGCCTTACCGCTGTTGAAGGAGCCTCCGCCTaGGGTTTGAAACTGGACTGG +
Preference number: 5 (lower is better)
Translates to: LACVPITACTQENGLTAVEGASA*GLKLDW
Trigger: CCAGTCCAGTTTCAAACCCAAGGCGGAGGCTCCTTC...AACAGCGGTAAGGCCGTTCTCCTGTGTGCAAGCTGTAATGGGCACGCAGGCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CAA 90 bp GAATTCCAGGAGAGCCAAGGGTTACATAGAGAGACCATGTCTCAAAAATGGGGGTGGAGGTGGCAGGCGTaGCAGGGGTGGCTGAGGGGC +
Preference number: 5 (lower is better)
Translates to: EFQESQGLHRETMSQKWGWRWQA*QGWLRG
Trigger: GCCCCTCAGCCACCCCTGCAACGCCTGCCACCTCCA...CCCCCATTTTTGAGACATGGTCTCTCTATGTAACCCTTGGCTCTCCTGGAATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp CAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCACTCCGGTTGAAGCTTTaGCTGCACACGGAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: QGLADRRLPVFPWWLRASLRLKL*LHTEQE
Trigger: CTCCTGCTCCGTGTGCAGCAAAAGCTTCAACCGGAG...TGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp TGTACAACCAAAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCCCACAGCAGAACGTCTaGCTGGGGCCGCCTGCGCCC +
Preference number: 5 (lower is better)
Translates to: CTTKVCVCVCVCVCVCVRPQQNV*LGPPAP
Trigger: GGGCGCAGGCGGCCCCAGCAAGACGTTCTGCTGTGG...GCGCACACACACACACACACACACACACACACACACACAAACTTTGGTTGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CAA 90 bp CAAAGCAAGTCCATAGCTAGCCTAGACTACATGAGACCGTCTCCAGTAAGTCTGCCACAGCAGAACGTCTaGCTGGGGCCGCCTGCGCCC +
Preference number: 5 (lower is better)
Translates to: QSKSIASLDYMRPSPVSLPQQNV*LGPPAP
Trigger: GGGCGCAGGCGGCCCCAGCAAGACGTTCTGCTGTGG...CAGACTTACTGGAGACGGTCTCATGTAGTCTAGGCTAGCTATGGACTTGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp AGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGGACATGGCAAATCCTTCTCCGGCCAGTCCGTaGTCCAGCACGCTGGATGCA +
Preference number: 5 (lower is better)
Translates to: RGRLPCFTQANAWDMANPSPASP*SSTLDA
Trigger: TGCATCCAGCGTGCTGGACAACGGACTGGCCGGAGA...AGGATTTGCCATGTCCCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CAA 90 bp CAGGGCTTGGCAGACAGAAGGCTTCCGGTGTTTCCATGGTGGCTGAGAGCATCAGGCGGATCCATCTTCTaGGCTTGGGAAGAGGATGAG +
Preference number: 5 (lower is better)
Translates to: QGLADRRLPVFPWWLRASGGSIF*AWEEDE
Trigger: CTCATCCTCTTCCCAAGCCAAGAAGATGGATCCGCC...TGATGCTCTCAGCCACCATGGAAACACCGGAAGCCTTCTGTCTGCCAAGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp TCAAATCAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGCCTTGTCGTCCTTGGTaGGGTCGCAGGCTGCCCCTA +
Preference number: 5 (lower is better)
Translates to: SNQFLRGRLPCFTQANAWPCRPW*GRRLPL
Trigger: TAGGGGCAGCCTGCGACCCAACCAAGGACGACAAGG...CCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTGATTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS TCA 90 bp TGGCGTGTTCCCCGTATAGCTCCATGGGCTCAAAGCGCTGGTGGTTaGGGAATTCCAGGAAGTCAAATGGGTAACTCTGGAAGTGGACCC +
Preference number: 5 (lower is better)
Translates to: WRVPRIAPWAQSAGG*GIPGSQMGNSGSGP
Trigger: GGGTCCACTTCCAGAGTTACCCATTTGACTTCCTGGAATTCCTCAACCACCAGCGCTTTGAGCCCATGGAGCTATACGGGGAACACGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp CAAAGCAAGTCCATAGCTAGCCTAGACTACATGAGACCGTCTCCAGTAAGTCTGGGGTGGGTAGTCATATaGGGGTGGAGGAGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: QSKSIASLDYMRPSPVSLGWVVI*GWRRLG
Trigger: CCCCAGCCTCCTCCACCCCAATATGACTACCCACCC...CAGACTTACTGGAGACGGTCTCATGTAGTCTAGGCTAGCTATGGACTTGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp TCAAATCAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGATGAAACCGAACGTCTaGCCGCAGGCGTCACAGCCA +
Preference number: 5 (lower is better)
Translates to: SNQFLRGRLPCFTQANAWMKPNV*PQASQP
Trigger: TGGCTGTGACGCCTGCGGCAAGACGTTCGGTTTCAT...CCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTGATTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp CAGAGGCCAAGGAGAAATCATGAGCAGTTGGAGTTAGATGAAAAAGGGAACCTGCCTTGTCGTCCTTGGTaGGGTCGCAGGCTGCCCCTA +
Preference number: 5 (lower is better)
Translates to: QRPRRNHEQLELDEKGNLPCRPW*GRRLPL
Trigger: TAGGGGCAGCCTGCGACCCAACCAAGGACGACAAGG...CAGGTTCCCTTTTTCATCTAACTCCAACTGCTCATGATTTCTCCTTGGCCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CAA 90 bp CTCTCTATTCTGCACTCTGAAGTAGGCATCTTCCTGCATAGCCCTGGGCAATTCAGGCTCTCCCTCCGGTaGAAGCTTTTGCTGCACACG +
Preference number: 5 (lower is better)
Translates to: LSILHSEVGIFLHSPGQFRLSLR*KLLLHT
Trigger: CGTGTGCAGCAAAAGCTTCAACCGGAGGGAGAGCCT...GAATTGCCCAGGGCTATGCAGGAAGATGCCTACTTCAGAGTGCAGAATAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CAA 90 bp TCCAGGAGAGCCAAGGGTTACATAGAGAGACCATGTCTCAAAAATGGGGGAAAAGCATCGCGGAAGACCTaGCCACAGATGCCACAGGGC +
Preference number: 5 (lower is better)
Translates to: SRRAKGYIERPCLKNGGKASRKT*PQMPQG
Trigger: GCCCTGTGGCATCTGTGGCAAGGTCTTCCGCGATGC...TTTTCCCCCATTTTTGAGACATGGTCTCTCTATGTAACCCTTGGCTCTCCTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp CAAGTCATCTCTAAAGGGATGCTGGGATACCTTCCCCTCAAAACCGAGAGTACCTGCACCACGTGGTGCTaGCTCAGATGGAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: QVISKGMLGYLPLKTESTCTTWC*LRWKDS
Trigger: GGAGTCCTTCCATCTGAGCAAGCACCACGTGGTGCA...GGTACTCTCGGTTTTGAGGGGAAGGTATCCCAGCATCCCTTTAGAGATGACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS GCA 90 bp CAGATGCCGCATTCGTATGGTCGTTCCCCGGAGTGCACTAACATGTaGTGGACCAGATGTGAGGACTGTTTGAAGGACTTCTGGCAAACA +
Preference number: 5 (lower is better)
Translates to: QMPHSYGRSPECTNM*WTRCEDCLKDFWQT
Trigger: TGTTTGCCAGAAGTCCTTCAAACAGTCCTCACATCTGGTCCAGCACATGTTAGTGCACTCCGGGGAACGACCATACGAATGCGGCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 90 bp ACTAACATGTGCTGGACCAGATGTGAGGACTGTTTGAAGGACTTCTaGCAAACACCACACGGGAAGCGTCGCTCCATCAGGTACTTCAGC +
Preference number: 5 (lower is better)
Translates to: TNMCWTRCEDCLKDF*QTPHGKRRSIRYFS
Trigger: GCTGAAGTACCTGATGGAGCGACGCTTCCCGTGTGGTGTTTGCCAGAAGTCCTTCAAACAGTCCTCACATCTGGTCCAGCACATGTTAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 90 bp ATGCCGCATTCGTATGGTCGTTCCCCGGAGTGCACTAACATGTGCTaGACCAGATGTGAGGACTGTTTGAAGGACTTCTGGCAAACACCA +
Preference number: 5 (lower is better)
Translates to: MPHSYGRSPECTNMC*TRCEDCLKDFWQTP
Trigger: TGGTGTTTGCCAGAAGTCCTTCAAACAGTCCTCACATCTGGTCCAGCACATGTTAGTGCACTCCGGGGAACGACCATACGAATGCGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp CCTCAGGTATGCTCTCCCAGCCTACTGGAGTGTGAATGTCATGTCCGATCAATTAGGTGGCTAGGCTTCTaGAAGACCTTCCAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: PQVCSPSLLECECHVRSIRWLGF*KTFQQR
Trigger: CCTCTGCTGGAAGGTCTTCAAGAAGCCTAGCCACCT...AATTGATCGGACATGACATTCACACTCCAGTAGGCTGGGAGAGCATACCTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp GCCTATCTGTACCTACAAAGCAAGTCCATAGCTAGCCTAGACTACATGAGACCGTGCACCACGTGGTGCTaGCTCAGATGGAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: AYLYLQSKSIASLDYMRPCTTWC*LRWKDS
Trigger: GGAGTCCTTCCATCTGAGCAAGCACCACGTGGTGCA...CGGTCTCATGTAGTCTAGGCTAGCTATGGACTTGCTTTGTAGGTACAGATAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp ATTTGGAGGTCAGAGGGCATCTCAGGAAGTCAGTCAGTCTGTCTTTCCACCCTGTCAAAGCGCTGGTGGTaGAGGAATTCCAGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: IWRSEGISGSQSVCLSTLSKRWW*RNSRKS
Trigger: TGACTTCCTGGAATTCCTCAACCACCAGCGCTTTGA...CAGGGTGGAAAGACAGACTGACTGACTTCCTGAGATGCCCTCTGACCTCCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CAA 90 bp TCCAGGAGAGCCAAGGGTTACATAGAGAGACCATGTCTCAAAAATGGGGGAAAAAGGCTCTCCCTCCGGTaGAAGCTTTTGCTGCACACG +
Preference number: 5 (lower is better)
Translates to: SRRAKGYIERPCLKNGGKRLSLR*KLLLHT
Trigger: CGTGTGCAGCAAAAGCTTCAACCGGAGGGAGAGCCT...TTTTCCCCCATTTTTGAGACATGGTCTCTCTATGTAACCCTTGGCTCTCCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp TGTACAACCAAAGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGAAATGCTTGAAGCTTaGGCCGCATGTGGCACAGCT +
Preference number: 5 (lower is better)
Translates to: CTTKVCVCVCVCVCVCVREMLEA*AACGTA
Trigger: AGCTGTGCCACATGCGGCCAAAGCTTCAAGCATTTC...GCGCACACACACACACACACACACACACACACACACACAAACTTTGGTTGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS-3UTR CAA 90 bp CAAAGCAAGTCCATAGCTAGCCTAGACTACATGAGACCGTCTCCAGTAAGTCTGTCAAAGCGCTGGTGGTaGAGGAATTCCAGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: QSKSIASLDYMRPSPVSLSKRWW*RNSRKS
Trigger: TGACTTCCTGGAATTCCTCAACCACCAGCGCTTTGA...CAGACTTACTGGAGACGGTCTCATGTAGTCTAGGCTAGCTATGGACTTGCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp TCAAATCAGTTCCTGAGAGGGCGACTTCCCTGTTTCACTCAGGCTAATGCCTGGAGATGTGAGGACTGTTaGAAGGACTTCTGGCAAACA +
Preference number: 5 (lower is better)
Translates to: SNQFLRGRLPCFTQANAWRCEDC*KDFWQT
Trigger: TGTTTGCCAGAAGTCCTTCAAACAGTCCTCACATCT...CCAGGCATTAGCCTGAGTGAAACAGGGAAGTCGCCCTCTCAGGAACTGATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS-3UTR CAA 90 bp GTTAAGTTCCTCAGGTATGCTCTCCCAGCCTACTGGAGTGTGAATGTCATGTCCAGATGTGAGGACTGTTaGAAGGACTTCTGGCAAACA +
Preference number: 5 (lower is better)
Translates to: VKFLRYALPAYWSVNVMSRCEDC*KDFWQT
Trigger: TGTTTGCCAGAAGTCCTTCAAACAGTCCTCACATCT...GGACATGACATTCACACTCCAGTAGGCTGGGAGAGCATACCTGAGGAACTTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 72 bp CCTGCAGCTCCGGGTCCACAGGCCCCAGTGGTCCCCTaGCCGGTGGCGAGGCCTGTGGCTCCGGCCAGGGCG +
Preference number: 6 (lower is better)
Translates to: PAAPGPQAPVVP*PVARPVAPARA
Trigger: CGCCCTGGCCGGAGCCACAGGCCTCGCCACCGGCCAGGGGACCACTGGGGCCTGTGGACCCGGAGCTGCAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 72 bp AGGCCCCAGTGGTCCCCTGGCCGGTGGCGAGGCCTGTaGCTCCGGCCAGGGCGCAGGGCAATTGGAGCCGAT +
Preference number: 6 (lower is better)
Translates to: RPQWSPGRWRGL*LRPGRRAIGAD
Trigger: ATCGGCTCCAATTGCCCTGCGCCCTGGCCGGAGCCACAGGCCTCGCCACCGGCCAGGGGACCACTGGGGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CAA 90 bp CCAGCCAGCGCTGCCACAGCCGTCCCCACCTCTCCGGCCAGTCCGTaGTCCAGCACGCTGGATGCATCGGTGCCGCCGCCGCTGCTGCCG +
Preference number: 6 (lower is better)
Translates to: PASAATAVPTSPASP*SSTLDASVPPPLLP
Trigger: CGGCAGCAGCGGCGGCGGCACCGATGCATCCAGCGTGCTGGACAACGGACTGGCCGGAGAGGTGGGGACGGCTGTGGCAGCGCTGGCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS GCA 72 bp GTCGCAGGGGTACACCGGCCGCGGAGTCCCGGCCGCTaGGTGGGCTGCCTGGTGCTTGAGGAGGTAGGAAGC +
Preference number: 6 (lower is better)
Translates to: VAGVHRPRSPGR*VGCLVLEEVGS
Trigger: GCTTCCTACCTCCTCAAGCACCAGGCAGCCCACGCAGCGGCCGGGACTCCGCGGCCGGTGTACCCCTGCGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 72 bp TCAGGGTCTCGCGGCGCCCAAACGCGCGCCCACAGATaGCACAGCAGAACGTCTTGCTGGGGCCGCCTGCGC +
Preference number: 6 (lower is better)
Translates to: SGSRGAQTRAHR*HSRTSCWGRLR
Trigger: GCGCAGGCGGCCCCAGCAAGACGTTCTGCTGTGGCATCTGTGGGCGCGCGTTTGGGCGCCGCGAGACCCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 72 bp CTGCGGCGGGGTCAGAGCTGGCTGTGGCACTGGCTGTaGATACCGGGAGGCCCAGTGAAGGGAGTGCGGGCC +
Preference number: 6 (lower is better)
Translates to: LRRGQSWLWHWL*IPGGPVKGVRA
Trigger: GGCCCGCACTCCCTTCACTGGGCCTCCCGGTATCCACAGCCAGTGCCACAGCCAGCTCTGACCCCGCCGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 72 bp TCGGTGCCGCCGCCGCTGCTGCCGCCATCAGAAGACTaGGGGCCACTGGGTGTTGGCGCTAGAAGGCGCTCC +
Preference number: 6 (lower is better)
Translates to: SVPPPLLPPSED*GPLGVGARRRS
Trigger: GGAGCGCCTTCTAGCGCCAACACCCAGTGGCCCCCAGTCTTCTGATGGCGGCAGCAGCGGCGGCGGCACCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 72 bp TCCCCACCTCTCCGGCCAGTCCGTTGTCCAGCACGCTaGATGCATCGGTGCCGCCGCCGCTGCTGCCGCCAT +
Preference number: 6 (lower is better)
Translates to: SPPLRPVRCPAR*MHRCRRRCCRH
Trigger: ATGGCGGCAGCAGCGGCGGCGGCACCGATGCATCCAGCGTGCTGGACAACGGACTGGCCGGAGAGGTGGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS CAA 72 bp CCAAACGCGCGCCCACAGATGCCACAGCAGAACGTCTaGCTGGGGCCGCCTGCGCCCGGGCCTCCAGCACCA +
Preference number: 6 (lower is better)
Translates to: PNARPQMPQQNV*LGPPAPGPPAP
Trigger: TGGTGCTGGAGGCCCGGGCGCAGGCGGCCCCAGCAAGACGTTCTGCTGTGGCATCTGTGGGCGCGCGTTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CAA 90 bp CGCCGCCGCTGCTGCCGCCATCAGAAGACTGGGGGCCACTGGGTGTaGGCGCTAGAAGGCGCTCCGGGGCAGCCTGGTGAACCAGCTTGT +
Preference number: 6 (lower is better)
Translates to: RRRCCRHQKTGGHWV*ALEGAPGQPGEPAC
Trigger: ACAAGCTGGTTCACCAGGCTGCCCCGGAGCGCCTTCTAGCGCCAACACCCAGTGGCCCCCAGTCTTCTGATGGCGGCAGCAGCGGCGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS TCA 72 bp GGCTGTGGCACTGGCTGTGGATACCGGGAGGCCCAGTaGAGGGAGTGCGGGCCCAGGCTGTGGCGTACCTCC +
Preference number: 6 (lower is better)
Translates to: GCGTGCGYREAQ*RECGPRLWRTS
Trigger: GGAGGTACGCCACAGCCTGGGCCCGCACTCCCTTCACTGGGCCTCCCGGTATCCACAGCCAGTGCCACAGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS TCA 72 bp CGGTGCAGGAGCAGATCGTACGCGCCCGCAAAGCTCTaGCCGCAGAGGCCGCAACCAAGGGTCCGGCGCACC +
Preference number: 6 (lower is better)
Translates to: RCRSRSYAPAKL*PQRPQPRVRRT
Trigger: GGTGCGCCGGACCCTTGGTTGCGGCCTCTGCGGTCAGAGCTTTGCGGGCGCGTACGATCTGCTCCTGCACCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS GCA 72 bp AGCAGGCATAGCTCAGGTCGGCCGGCCCACCTGAAGTaGCTGCAGCTCCGGGTCCACAGGCCCCAGTGGTCC +
Preference number: 6 (lower is better)
Translates to: SRHSSGRPAHLK*LQLRVHRPQWS
Trigger: GGACCACTGGGGCCTGTGGACCCGGAGCTGCAGGCACTTCAGGTGGGCCGGCCGACCTGAGCTATGCCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 72 bp CCAGCACGCTGGATGCATCGGTGCCGCCGCCGCTGCTaGCGCCATCAGAAGACTGGGGGCCACTGGGTGTTG +
Preference number: 6 (lower is better)
Translates to: PARWMHRCRRRC*RHQKTGGHWVL
Trigger: CAACACCCAGTGGCCCCCAGTCTTCTGATGGCGGCAGCAGCGGCGGCGGCACCGATGCATCCAGCGTGCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 72 bp TGTCCAGCACGCTGGATGCATCGGTGCCGCCGCCGCTaGTGCCGCCATCAGAAGACTGGGGGCCACTGGGTG +
Preference number: 6 (lower is better)
Translates to: CPARWMHRCRRR*CRHQKTGGHWV
Trigger: CACCCAGTGGCCCCCAGTCTTCTGATGGCGGCAGCAGCGGCGGCGGCACCGATGCATCCAGCGTGCTGGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS TCA 72 bp GCGGAGTCCCGGCCGCTGCGTGGGCTGCCTGGTGCTTaGGGAGGTAGGAAGCATCGCGGAAGACCTTGCCAC +
Preference number: 6 (lower is better)
Translates to: AESRPLRGLPGA*GGRKHRGRPCH
Trigger: GTGGCAAGGTCTTCCGCGATGCTTCCTACCTCCTCAAGCACCAGGCAGCCCACGCAGCGGCCGGGACTCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 72 bp GAAATAGCCCTTGTCGTCCTTGGTTGGGTCGCAGGCTaGCCCTACTGCGGGCCCAGGCGGGGTCTGCGAGGG +
Preference number: 6 (lower is better)
Translates to: EIALVVLGWVAG*PYCGPRRGLRG
Trigger: CCCTCGCAGACCCCGCCTGGGCCCGCAGTAGGGGCAGCCTGCGACCCAACCAAGGACGACAAGGGCTATTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 72 bp GGCCAGAGGACACTGCGGCGGGGTCAGAGCTGGCTGTaGCACTGGCTGTGGATACCGGGAGGCCCAGTGAAG +
Preference number: 6 (lower is better)
Translates to: GQRTLRRGQSWL*HWLWIPGGPVK
Trigger: CTTCACTGGGCCTCCCGGTATCCACAGCCAGTGCCACAGCCAGCTCTGACCCCGCCGCAGTGTCCTCTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 72 bp ACTCAACCTCTCCGGCCAGTCCGTTGTCCAGCACGCTaGATGCATCGGTGCCGCCGCCGCTGCTGCCGCCAT +
Preference number: 6 (lower is better)
Translates to: TQPLRPVRCPAR*MHRCRRRCCRH
Trigger: ATGGCGGCAGCAGCGGCGGCGGCACCGATGCATCCAGCGTGCTGGACAACGGACTGGCCGGAGAGGTTGAGT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085427.6
CDS CCA 72 bp CCACACACTGGGCAGCGGAAACCCCGTTTCTGCCGGTaGCTTCGGCGGTGCAGGAGCAGATCGTACGCGCCC +
Preference number: 6 (lower is better)
Translates to: PHTGQRKPRFCR*LRRCRSRSYAP
Trigger: GGGCGCGTACGATCTGCTCCTGCACCGCCGAAGCCACCGGCAGAAACGGGGTTTCCGCTGCCCAGTGTGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS CAA 72 bp CGGTGCTCCGCTAGGCTAGAAGACTGCGCGAAGTGCTaGGCGCACACGCCGCACTTGAAGGCGCGCTCGCCC +
Preference number: 6 (lower is better)
Translates to: RCSARLEDCAKC*AHTPHLKARSP
Trigger: GGGCGAGCGCGCCTTCAAGTGCGGCGTGTGCGCCAAGCACTTCGCGCAGTCTTCTAGCCTAGCGGAGCACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS TCA 72 bp CATTCCCCGCACCGCCGAGCAGCAGCGGATGCGCGCTaGGAAGTGGGACAGGCACCGCACCATACACCACAG +
Preference number: 6 (lower is better)
Translates to: HSPHRRAAADAR*EVGQAPHHTPQ
Trigger: CTGTGGTGTATGGTGCGGTGCCTGTCCCACTTCTCAGCGCGCATCCGCTGCTGCTCGGCGGTGCGGGGAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CAA 72 bp TGCTGCCGCCATCAGAAGACTGGGGGCCACTGGGTGTaGGCGCTAGAAGGCGCTCCGGGGCAGCCTGGTGAA +
Preference number: 6 (lower is better)
Translates to: CCRHQKTGGHWV*ALEGAPGQPGE
Trigger: TTCACCAGGCTGCCCCGGAGCGCCTTCTAGCGCCAACACCCAGTGGCCCCCAGTCTTCTGATGGCGGCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS TCA 72 bp AGGGCAATTGGAGCCGATGCACCTGGCGGTGGCGTGTaGGGCTCTGCGGGTAGCCGAAGACCTTGCCGCACA +
Preference number: 6 (lower is better)
Translates to: RAIGADAPGGGV*GSAGSRRPCRT
Trigger: TGTGCGGCAAGGTCTTCGGCTACCCGCAGAGCCTCACACGCCACCGCCAGGTGCATCGGCTCCAATTGCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 72 bp GGAGGTAGGAAGCATCGCGGAAGACCTTGCCACAGATaGCACAGGGCAGGCGCAGCAAGTCGGCCGAGTGCG +
Preference number: 6 (lower is better)
Translates to: GGRKHRGRPCHR*HRAGAASRPSA
Trigger: CGCACTCGGCCGACTTGCTGCGCCTGCCCTGTGGCATCTGTGGCAAGGTCTTCCGCGATGCTTCCTACCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 72 bp GGTGGTGCGTGGGCAGCCTTGTGTCGCAGCAGGCTCTaGGGTGCGGAGTATGTTTTCCCGCACAGGTCGCAG +
Preference number: 6 (lower is better)
Translates to: GGAWAALCRSRL*GAEYVFPHRSQ
Trigger: CTGCGACCTGTGCGGGAAAACATACTCCGCACCGCAGAGCCTGCTGCGACACAAGGCTGCCCACGCACCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 72 bp CGCTTCCCACACACTGGGCAGCGGAAACCCCGTTTCTaGCGGTGGCTTCGGCGGTGCAGGAGCAGATCGTAC +
Preference number: 6 (lower is better)
Translates to: RFPHTGQRKPRF*RWLRRCRSRSY
Trigger: GTACGATCTGCTCCTGCACCGCCGAAGCCACCGGCAGAAACGGGGTTTCCGCTGCCCAGTGTGTGGGAAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS CCA 72 bp CTTCAGCCTTCGGAAATAGCCCTTGTCGTCCTTGGTTaGGTCGCAGGCTGCCCCTACTGCGGGCCCAGGCGG +
Preference number: 6 (lower is better)
Translates to: LQPSEIALVVLG*VAGCPYCGPRR
Trigger: CCGCCTGGGCCCGCAGTAGGGGCAGCCTGCGACCCAACCAAGGACGACAAGGGCTATTTCCGAAGGCTGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 72 bp GGGCCCAGGCTGTGGCGTACCTCCAGTTGGTGTTGGTaGCACATCCTTGTGGCAGCGTCGGTGGCGGATGAG +
Preference number: 6 (lower is better)
Translates to: GPRLWRTSSWCW*HILVAASVADE
Trigger: CTCATCCGCCACCGACGCTGCCACAAGGATGTGCCACCAACACCAACTGGAGGTACGCCACAGCCTGGGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CAA 90 bp CCATCAGGTACTTCAGCCTTCGGAAATAGCCCTTGTCGTCCTTGGTaGGGTCGCAGGCTGCCCCTACTGCGGGCCCAGGCGGGGTCTGCG +
Preference number: 6 (lower is better)
Translates to: PSGTSAFGNSPCRPW*GRRLPLLRAQAGSA
Trigger: CGCAGACCCCGCCTGGGCCCGCAGTAGGGGCAGCCTGCGACCCAACCAAGGACGACAAGGGCTATTTCCGAAGGCTGAAGTACCTGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 72 bp TGCGTGGGCAGCCTTGTGTCGCAGCAGGCTCTGCGGTaGGGAGTATGTTTTCCCGCACAGGTCGCAGGGGTA +
Preference number: 6 (lower is better)
Translates to: CVGSLVSQQALR*GVCFPAQVAGV
Trigger: TACCCCTGCGACCTGTGCGGGAAAACATACTCCGCACCGCAGAGCCTGCTGCGACACAAGGCTGCCCACGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 72 bp GATGGCGTAACACGGAGCTCAGGTAGAAGAAGCCCTTaGCGCAGTGCTCACAGCGGTAGGCGCGCTCGCCCA +
Preference number: 6 (lower is better)
Translates to: DGVTRSSGRRSP*RSAHSGRRARP
Trigger: TGGGCGAGCGCGCCTACCGCTGTGAGCACTGCGGCAAGGGCTTCTTCTACCTGAGCTCCGTGTTACGCCATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS CAA 72 bp ACTTCAGCCTTCGGAAATAGCCCTTGTCGTCCTTGGTaGGGTCGCAGGCTGCCCCTACTGCGGGCCCAGGCG +
Preference number: 6 (lower is better)
Translates to: TSAFGNSPCRPW*GRRLPLLRAQA
Trigger: CGCCTGGGCCCGCAGTAGGGGCAGCCTGCGACCCAACCAAGGACGACAAGGGCTATTTCCGAAGGCTGAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 72 bp GGTACTTCAGCCTTCGGAAATAGCCCTTGTCGTCCTTaGTTGGGTCGCAGGCTGCCCCTACTGCGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: GTSAFGNSPCRP*LGRRLPLLRAQ
Trigger: CTGGGCCCGCAGTAGGGGCAGCCTGCGACCCAACCAAGGACGACAAGGGCTATTTCCGAAGGCTGAAGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 72 bp AGCAGGGAAGGCAGCATCAAAGAGTGGAGGGGGAGGTaGCCCGAAGGTGGGTGGCAAAGGCGGATCCATCTT +
Preference number: 6 (lower is better)
Translates to: SREGSIKEWRGR*PEGGWQRRIHL
Trigger: AAGATGGATCCGCCTTTGCCACCCACCTTCGGGGCACCTCCCCCTCCACTCTTTGATGCTGCCTTCCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 72 bp GGGGTGGGCCCACCACGTTTCAGGTTCCCGAACAGGTaGTGGTGTCCAGAGAGGTCGACTATTCCCCATTGC +
Preference number: 6 (lower is better)
Translates to: GVGPPRFRFPNR*WCPERSTIPHC
Trigger: GCAATGGGGAATAGTCGACCTCTCTGGACACCAGCACCTGTTCGGGAACCTGAAACGTGGTGGGCCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 72 bp CAGCATCAAAGAGTGGAGGGGGAGGTGCCCCGAAGGTaGGTGGCAAAGGCGGATCCATCTTCTTGGCTTGGG +
Preference number: 6 (lower is better)
Translates to: QHQRVEGEVPRR*VAKADPSSWLG
Trigger: CCCAAGCCAAGAAGATGGATCCGCCTTTGCCACCCACCTTCGGGGCACCTCCCCCTCCACTCTTTGATGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS TCA 72 bp TTGGTGGCACATCCTTGTGGCAGCGTCGGTGGCGGATaGGACTGGAGACATGGTTGTAGGTGCGGCCACAGA +
Preference number: 6 (lower is better)
Translates to: LVAHPCGSVGGG*DWRHGCRCGHR
Trigger: TCTGTGGCCGCACCTACAACCATGTCTCCAGTCTCATCCGCCACCGACGCTGCCACAAGGATGTGCCACCAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS TCA 72 bp GGCAGGCGCAGCAAGTCGGCCGAGTGCGTTTTCACGTaGCGTTTGAGGCTCTCCCTCCGGTTGAAGCTTTTG +
Preference number: 6 (lower is better)
Translates to: GRRSKSAECVFT*RLRLSLRLKLL
Trigger: CAAAAGCTTCAACCGGAGGGAGAGCCTCAAACGTCACGTGAAAACGCACTCGGCCGACTTGCTGCGCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS TCA 72 bp GGTGTTGGCGCTAGAAGGCGCTCCGGGGCAGCCTGGTaGACCAGCTTGTGCCACATGAGGTTCTCGATGAAA +
Preference number: 6 (lower is better)
Translates to: GVGARRRSGAAW*TSLCHMRFSMK
Trigger: TTTCATCGAGAACCTCATGTGGCACAAGCTGGTTCACCAGGCTGCCCCGGAGCGCCTTCTAGCGCCAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 72 bp GTGGGCCCACCACGTTTCAGGTTCCCGAACAGGTGCTaGTGTCCAGAGAGGTCGACTATTCCCCATTGCGGA +
Preference number: 6 (lower is better)
Translates to: VGPPRFRFPNRC*CPERSTIPHCG
Trigger: TCCGCAATGGGGAATAGTCGACCTCTCTGGACACCAGCACCTGTTCGGGAACCTGAAACGTGGTGGGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 72 bp TGTGCATCAGGCGGTGTTTCTTCAGACCATAGGTGTTaGCGAAGCCCTCACCGCAGGAGGAGCAGCGGAAGG +
Preference number: 6 (lower is better)
Translates to: CASGGVSSDHRC*RSPHRRRSSGR
Trigger: CCTTCCGCTGCTCCTCCTGCGGTGAGGGCTTCGCCAACACCTATGGTCTGAAGAAACACCGCCTGATGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS GCA 72 bp AGGTGCTGGTGTCCAGAGAGGTCGACTATTCCCCATTaGGGAGCAGGGAAGGCAGCATCAAAGAGTGGAGGG +
Preference number: 6 (lower is better)
Translates to: RCWCPERSTIPH*GAGKAASKSGG
Trigger: CCCTCCACTCTTTGATGCTGCCTTCCCTGCTCCGCAATGGGGAATAGTCGACCTCTCTGGACACCAGCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 72 bp AAAGCGCTGGTGGTTGAGGAATTCCAGGAAGTCAAATaGGTAACTCTGGAAGTGGACCCCGTCCTCGCCCCC +
Preference number: 6 (lower is better)
Translates to: KALVVEEFQEVK*VTLEVDPVLAP
Trigger: GGGGGCGAGGACGGGGTCCACTTCCAGAGTTACCCATTTGACTTCCTGGAATTCCTCAACCACCAGCGCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS TCA 72 bp ACGGCTTCTCTGACATGTGAGCTTCCTTGTGACTCATaGCGTGGAAGAGATCCGGGAAGTGCTCCCCGCAGT +
Preference number: 6 (lower is better)
Translates to: TASLTCELPCDS*RGRDPGSAPRS
Trigger: ACTGCGGGGAGCACTTCCCGGATCTCTTCCACGTCATGAGTCACAAGGAAGCTCACATGTCAGAGAAGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS TCA 72 bp CGTCTTGCCGCAGGCGTCACAGCCATACGGCTTCTCTaGCATGTGAGCTTCCTTGTGACTCATGACGTGGAA +
Preference number: 6 (lower is better)
Translates to: RLAAGVTAIRLL*HVSFLVTHDVE
Trigger: TTCCACGTCATGAGTCACAAGGAAGCTCACATGTCAGAGAAGCCGTATGGCTGTGACGCCTGCGGCAAGACG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 72 bp CCACAGATGCCGCATTCGTATGGTCGTTCCCCGGAGTaGACTAACATGTGCTGGACCAGATGTGAGGACTGT +
Preference number: 6 (lower is better)
Translates to: PQMPHSYGRSPE*TNMCWTRCEDC
Trigger: ACAGTCCTCACATCTGGTCCAGCACATGTTAGTGCACTCCGGGGAACGACCATACGAATGCGGCATCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CAA 72 bp TTGTGCCACATGAGGTTCTCGATGAAACCGAACGTCTaGCCGCAGGCGTCACAGCCATACGGCTTCTCTGAC +
Preference number: 6 (lower is better)
Translates to: LCHMRFSMKPNV*PQASQPYGFSD
Trigger: GTCAGAGAAGCCGTATGGCTGTGACGCCTGCGGCAAGACGTTCGGTTTCATCGAGAACCTCATGTGGCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS TCA 72 bp CAACCAAGGGTCCGGCGCACCAGGTGCACATACTTATaGGTCACCAGGCCTAGGAAATGCTTGAAGCTTTGG +
Preference number: 6 (lower is better)
Translates to: QPRVRRTRCTYL*VTRPRKCLKLW
Trigger: CCAAAGCTTCAAGCATTTCCTAGGCCTGGTGACTCATAAGTATGTGCACCTGGTGCGCCGGACCCTTGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076251.7
CDS TCA 72 bp CCCCGTATAGCTCCATGGGCTCAAAGCGCTGGTGGTTaGGGAATTCCAGGAAGTCAAATGGGTAACTCTGGA +
Preference number: 6 (lower is better)
Translates to: PRIAPWAQSAGG*GIPGSQMGNSG
Trigger: TCCAGAGTTACCCATTTGACTTCCTGGAATTCCTCAACCACCAGCGCTTTGAGCCCATGGAGCTATACGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS TCA 72 bp ATGATGAAGATGAGGAAGGAGCCTCCGCCTTGGGTTTaGAACTGGACTGGGGTGGGTAGTCATATTGGGGTG +
Preference number: 6 (lower is better)
Translates to: MMKMRKEPPPWV*NWTGVGSHIGV
Trigger: CACCCCAATATGACTACCCACCCCAGTCCAGTTTCAAACCCAAGGCGGAGGCTCCTTCCTCATCTTCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS CCA 72 bp TCGTATGGTCGTTCCCCGGAGTGCACTAACATGTGCTaGACCAGATGTGAGGACTGTTTGAAGGACTTCTGG +
Preference number: 6 (lower is better)
Translates to: SYGRSPECTNMC*TRCEDCLKDFW
Trigger: CCAGAAGTCCTTCAAACAGTCCTCACATCTGGTCCAGCACATGTTAGTGCACTCCGGGGAACGACCATACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6
CDS GCA 72 bp CATTCGTATGGTCGTTCCCCGGAGTGCACTAACATGTaGTGGACCAGATGTGAGGACTGTTTGAAGGACTTC +
Preference number: 6 (lower is better)
Translates to: HSYGRSPECTNM*WTRCEDCLKDF
Trigger: GAAGTCCTTCAAACAGTCCTCACATCTGGTCCAGCACATGTTAGTGCACTCCGGGGAACGACCATACGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000076251.7
ENSMUST00000085427.6