RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP853 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000093910

Ensembl transcript IDs: ENSMUST00000180336.2, ENSMUST00000212355.2, ENSMUST00000212715.2

Found 330 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGACAATGACCTGGAGCCTCAGTCTCCTGTCTCCACCTCCCAAGTaGTGGGACTATCTGGGTCCACACACCGGGTTTGTATGGTGCTGG +
Preference number: 1 (lower is better)
Translates to: LTMTWSLSLLSPPPK*WDYLGPHTGFVWCW
Trigger: CCAGCACCATACAAACCCGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACTGAGGCTCCAGGTCATTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
3UTR CCA 90 bp GGAGCCTCAGTCTCCTGTCTCCACCTCCCAAGTGCTGGGACTATCTaGGTCCACACACCGGGTTTGTATGGTGCTGGAGATGAAAACCAG +
Preference number: 1 (lower is better)
Translates to: GASVSCLHLPSAGTI*VHTPGLYGAGDENQ
Trigger: CTGGTTTTCATCTCCAGCACCATACAAACCCGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACTGAGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
3UTR GCA 90 bp CTTTCTGCTAGGCAAGCAATTTACAGTAGGCTGGACTCCATCCTCTaGCCCTCCCCTTCCAGTTTCTCCTTAAGTATTCAGAATGATCCA +
Preference number: 1 (lower is better)
Translates to: LSARQAIYSRLDSIL*PSPSSFSLSIQNDP
Trigger: TGGATCATTCTGAATACTTAAGGAGAAACTGGAAGGGGAGGGGCAGAGGATGGAGTCCAGCCTACTGTAAATTGCTTGCCTAGCAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
3UTR CCA 90 bp CACACACACACACACACACACACACACACTAAATATTTCATTTGCTaGTTAGTGTTTGGTTGTATCAAATCTCACGAGTTGTTTGCTACC +
Preference number: 1 (lower is better)
Translates to: HTHTHTHTHTKYFIC*LVFGCIKSHELFAT
Trigger: GGTAGCAAACAACTCGTGAGATTTGATACAACCAAACACTAACCAGCAAATGAAATATTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
3UTR CAA 90 bp CTCCACCTCCCAAGTGCTGGGACTATCTGGGTCCACACACCGGGTTaGTATGGTGCTGGAGATGAAAACCAGGGCTTTCTGCTAGGCAAG +
Preference number: 2 (lower is better)
Translates to: LHLPSAGTIWVHTPG*YGAGDENQGFLLGK
Trigger: CTTGCCTAGCAGAAAGCCCTGGTTTTCATCTCCAGCACCATACAAACCCGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
3UTR-3UTR CCA 90 bp CATGTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCCACCTCCCAAGTGCTaGGACTATCTGGGTCCACAC +
Preference number: 2 (lower is better)
Translates to: HVTQAICQLTMCLTMTWSPPPKC*DYLGPH
Trigger: GTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGG...GCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
3UTR-3UTR CCA 90 bp CCGGGTTTGTATGGTGCTGGAGATGAAAACCAGGGCTTTCTGCTAGGCAAGCAATTTCCCAGGCAAAGCTaGGCAGTCTCTTTCACCGAC +
Preference number: 2 (lower is better)
Translates to: PGLYGAGDENQGFLLGKQFPRQS*AVSFTD
Trigger: GTCGGTGAAAGAGACTGCCCAGCTTTGCCTGGGAAA...TTGCTTGCCTAGCAGAAAGCCCTGGTTTTCATCTCCAGCACCATACAAACCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
3UTR-3UTR CCA 90 bp AACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCTCAGCAATTTACAGTAGGCTaGACTCCATCCTCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: NPGYLPTHYVPDNDLEPQQFTVG*TPSSAP
Trigger: AGGGGCAGAGGATGGAGTCCAGCCTACTGTAAATTG...CTGAGGCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
3UTR-3UTR GCA 90 bp AACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCTCAGATCTCACGAGTTGTTTaGTACCAAGCCAGTTCTCAG +
Preference number: 2 (lower is better)
Translates to: NPGYLPTHYVPDNDLEPQISRVV*YQASSQ
Trigger: CTGAGAACTGGCTTGGTAGCAAACAACTCGTGAGAT...CTGAGGCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
3UTR-3UTR GCA 90 bp CATGTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCATCTCACGAGTTGTTTaGTACCAAGCCAGTTCTCAG +
Preference number: 2 (lower is better)
Translates to: HVTQAICQLTMCLTMTWSISRVV*YQASSQ
Trigger: CTGAGAACTGGCTTGGTAGCAAACAACTCGTGAGAT...GCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
3UTR GCA 72 bp ACCTGGAGCCTCAGTCTCCTGTCTCCACCTCCCAAGTaGTGGGACTATCTGGGTCCACACACCGGGTTTGTA +
Preference number: 3 (lower is better)
Translates to: TWSLSLLSPPPK*WDYLGPHTGFV
Trigger: TACAAACCCGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACTGAGGCTCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
3UTR-3UTR CAA 90 bp GTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCTCGGCCAGGACCTAGGGTaGAGGTGTGTGTGTGGATGG +
Preference number: 3 (lower is better)
Translates to: VTQAICQLTMCLTMTWSLGQDLG*RCVCGW
Trigger: CCATCCACACACACACCTCAACCCTAGGTCCTGGCC...GAGGCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
3UTR CCA 72 bp CAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTaGGCAGTCTCTTTCACCGACCTGGAGATGGTTTGG +
Preference number: 3 (lower is better)
Translates to: QASSQSYFPRQS*AVSFTDLEMVW
Trigger: CCAAACCATCTCCAGGTCGGTGAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
3UTR-3UTR CAA 90 bp ATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACGGCCAGGACCTAGGGTaGAGGTGTGTGTGTGGATGG +
Preference number: 3 (lower is better)
Translates to: IHSFSSSHTHTHTHTHTHGQDLG*RCVCGW
Trigger: CCATCCACACACACACCTCAACCCTAGGTCCTGGCC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
3UTR TCA 72 bp CTGGGTCCACACACCGGGTTTGTATGGTGCTGGAGATaGAAACCAGGGCTTTCTGCTAGGCAAGCAATTTAC +
Preference number: 3 (lower is better)
Translates to: LGPHTGFVWCWR*KPGLSARQAIY
Trigger: GTAAATTGCTTGCCTAGCAGAAAGCCCTGGTTTTCATCTCCAGCACCATACAAACCCGGTGTGTGGACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
3UTR GCA 72 bp TCTCATGTAACCCAGGCTATCTGCCAACTCACTATGTaGCTGACAATGACCTGGAGCCTCAGTCTCCTGTCT +
Preference number: 3 (lower is better)
Translates to: SHVTQAICQLTM*LTMTWSLSLLS
Trigger: AGACAGGAGACTGAGGCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTACATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
3UTR GCA 72 bp AGGCAAGCAATTTACAGTAGGCTGGACTCCATCCTCTaGCCCTCCCCTTCCAGTTTCTCCTTAAGTATTCAG +
Preference number: 3 (lower is better)
Translates to: RQAIYSRLDSIL*PSPSSFSLSIQ
Trigger: CTGAATACTTAAGGAGAAACTGGAAGGGGAGGGGCAGAGGATGGAGTCCAGCCTACTGTAAATTGCTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
3UTR GCA 72 bp GTTAGTGTTTGGTTGTATCAAATCTCACGAGTTGTTTaGTACCAAGCCAGTTCTCAGTCCTATTTTCCCAGG +
Preference number: 3 (lower is better)
Translates to: VSVWLYQISRVV*YQASSQSYFPR
Trigger: CCTGGGAAAATAGGACTGAGAACTGGCTTGGTAGCAAACAACTCGTGAGATTTGATACAACCAAACACTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
3UTR CCA 72 bp ACACACACACACACACACACTAAATATTTCATTTGCTaGTTAGTGTTTGGTTGTATCAAATCTCACGAGTTG +
Preference number: 3 (lower is better)
Translates to: THTHTHTKYFIC*LVFGCIKSHEL
Trigger: CAACTCGTGAGATTTGATACAACCAAACACTAACCAGCAAATGAAATATTTAGTGTGTGTGTGTGTGTGTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp TCAGTCTCCTGTCTCCACCTCCCAAGTGCTGGGACTATCTGGGTCCACACACCGCCCACCACTGCCACCTaGGAGGGTGTCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SVSCLHLPSAGTIWVHTPPTTAT*EGVRPW
Trigger: CCAGGGCCTGACACCCTCTCAGGTGGCAGTGGTGGG...CGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp GCTAGGCAAGCAATTTACAGTAGGCTGGACTCCATCCTCTGCCCCTCCCCTTCCGGCTGGAGCTGGCGCTaGACCTCCCGGAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: ARQAIYSRLDSILCPSPSGWSWR*TSRSWH
Trigger: GTGCCAGCTCCGGGAGGTTCAGCGCCAGCTCCAGCC...GGAAGGGGAGGGGCAGAGGATGGAGTCCAGCCTACTGTAAATTGCTTGCCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp AGTCTCCTGTCTCCACCTCCCAAGTGCTGGGACTATCTGGGTCCACACACCGGGGCGCCGAGCTCTCGCTaGAGCACTTGGAGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: SLLSPPPKCWDYLGPHTGAPSSR*STWSSR
Trigger: CCTACTGCTCCAAGTGCTTCAGCGAGAGCTCGGCGC...CCCGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp TCAGTCTCCTGTCTCCACCTCCCAAGTGCTGGGACTATCTGGGTCCACACACCGGGGCCACCACAACGGTaGCTGGAGCTGGCGCTGAAC +
Preference number: 4 (lower is better)
Translates to: SVSCLHLPSAGTIWVHTPGPPQR*LELALN
Trigger: GTTCAGCGCCAGCTCCAGCCACCGTTGTGGTGGCCC...CGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GCTAGGCAAGCAATTTACAGTAGGCTGGACTCCATCCTCTGCCCCTCCCCTTCCGCTGCAAGCACTGGCTaGTGTGGGTGGCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: ARQAIYSRLDSILCPSPSAASTG*CGWLLP
Trigger: GGGGAGCAGCCACCCACAGCAGCCAGTGCTTGCAGC...GGAAGGGGAGGGGCAGAGGATGGAGTCCAGCCTACTGTAAATTGCTTGCCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp TCAGTCTCCTGTCTCCACCTCCCAAGTGCTGGGACTATCTGGGTCCACACACCGTGCCTCTCCAGCTCCTaGTCAGACCCCACGTCCACC +
Preference number: 4 (lower is better)
Translates to: SVSCLHLPSAGTIWVHTPCLSSS*SDPTST
Trigger: GGTGGACGTGGGGTCTGAGCAGGAGCTGGAGAGGCA...CGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp TCAGTCTCCTGTCTCCACCTCCCAAGTGCTGGGACTATCTGGGTCCACACACCGAAGCACTGGCTGCTGTaGGTGGCTGCTCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SVSCLHLPSAGTIWVHTPKHWLL*VAAPLL
Trigger: CAGGAGGGGAGCAGCCACCCACAGCAGCCAGTGCTT...CGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp TCAGTCTCCTGTCTCCACCTCCCAAGTGCTGGGACTATCTGGGTCCACACACCGTGCGGTTGCTGCTCTTaGAACTGCCTGTGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SVSCLHLPSAGTIWVHTPCGCCS*NCLCSG
Trigger: GCCCGAGCACAGGCAGTTGCAAGAGCAGCAACCGCA...CGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp AGTCTCCTGTCTCCACCTCCCAAGTGCTGGGACTATCTGGGTCCACACACCGGGTCCAACACAAAGGTCTaGGTTGCTGGGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLLSPPPKCWDYLGPHTGSNTKV*VAGPSS
Trigger: GGAGCTGGGCCCAGCAACCCAGACCTTTGTGTTGGA...CCCGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp GTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCTCTGCAGCTCCTGCTGCTaGGCGCCTAGCTCCACCGGG +
Preference number: 4 (lower is better)
Translates to: VTQAICQLTMCLTMTWSLCSSCC*APSSTG
Trigger: CCCGGTGGAGCTAGGCGCCCAGCAGCAGGAGCTGCA...GAGGCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp TTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCACCGACCTGGAGATGGTTTGGGGCAGCGGGCAGCACCATaGGCTCTTGCAGCACCACGT +
Preference number: 4 (lower is better)
Translates to: FSQAKLGSLFHRPGDGLGQRAAP*ALAAPR
Trigger: ACGTGGTGCTGCAAGAGCTCATGGTGCTGCCCGCTG...CCCCAAACCATCTCCAGGTCGGTGAAAGAGACTGCCCAGCTTTGCCTGGGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GGGTTAAGGCCAGGACCTAGGGTTGAGGTGTGTGTGTGGATGGCGCTAACACCTTGCACTCGCAAGTCCTaGGGTTCCTCCTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GLRPGPRVEVCVWMALTPCTRKS*GSSCSG
Trigger: GCCAGAGCAGGAGGAACCGCAGGACTTGCGAGTGCA...AGGTGTTAGCGCCATCCACACACACACCTCAACCCTAGGTCCTGGCCTTAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AGTCTCCTGTCTCCACCTCCCAAGTGCTGGGACTATCTGGGTCCACACACCGGGCTTTCCAGCTCTTGCTaGCTCTCCAGCTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SLLSPPPKCWDYLGPHTGLSSSC*LSSSCS
Trigger: TGAGCAGGAGCTGGAGAGGCAGCAAGAGCTGGAAAG...CCCGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GCTAGGCAAGCAATTTACAGTAGGCTGGACTCCATCCTCTGCCCCTCCCCTTCCTGTTGCTCCAGCTGCTaGTGCTGCTGCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ARQAIYSRLDSILCPSPSCCSSC*CCCSCS
Trigger: GGAGCAGCTGCAGCAGCAGCAGCAGCTGGAGCAACA...GGAAGGGGAGGGGCAGAGGATGGAGTCCAGCCTACTGTAAATTGCTTGCCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp TCAGTCTCCTGTCTCCACCTCCCAAGTGCTGGGACTATCTGGGTCCACACACCGCCGGATGCAGAGTTCTaGTGGGCCCTTGTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: SVSCLHLPSAGTIWVHTPPDAEF*WALVEG
Trigger: GCCTTCTACAAGGGCCCAGCAGAACTCTGCATCCGG...CGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp CATGTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCTGCAGCTCCTGCTGCTaGGCGCCTAGCTCCACCGGG +
Preference number: 4 (lower is better)
Translates to: HVTQAICQLTMCLTMTWSCSSCC*APSSTG
Trigger: CCCGGTGGAGCTAGGCGCCCAGCAGCAGGAGCTGCA...GCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTACATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp TACCAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCCCCACCACTGCCACCTaGGAGGGTGTCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: YQASSQSYFPRQSWAVSFPTTAT*EGVRPW
Trigger: CCAGGGCCTGACACCCTCTCAGGTGGCAGTGGTGGG...GAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp GGGTTAAGGCCAGGACCTAGGGTTGAGGTGTGTGTGTGGATGGCGCTAACACCTGTAATAGGCCCCGAATaGGGCTGCAAGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: GLRPGPRVEVCVWMALTPVIGPE*GCKHWL
Trigger: CAGCCAGTGCTTGCAGCCTCATTCGGGGCCTATTAC...AGGTGTTAGCGCCATCCACACACACACCTCAACCCTAGGTCCTGGCCTTAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CCGGGTTTGTATGGTGCTGGAGATGAAAACCAGGGCTTTCTGCTAGGCAAGCAAGCTGCAAGCACTGGCTaGTGTGGGTGGCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: PGLYGAGDENQGFLLGKQAASTG*CGWLLP
Trigger: GGGGAGCAGCCACCCACAGCAGCCAGTGCTTGCAGC...TTGCTTGCCTAGCAGAAAGCCCTGGTTTTCATCTCCAGCACCATACAAACCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GGGTTAAGGCCAGGACCTAGGGTTGAGGTGTGTGTGTGGATGGCGCTAACACCTTGCTGCAGCAGTTGCTaGTGTTGGAGCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLRPGPRVEVCVWMALTPCCSSC*CWSSCC
Trigger: GCAGCAGCTGCTCCAACAGCAGCAACTGCTGCAGCA...AGGTGTTAGCGCCATCCACACACACACCTCAACCCTAGGTCCTGGCCTTAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AGTCTCCTGTCTCCACCTCCCAAGTGCTGGGACTATCTGGGTCCACACACCGGGTGCAATTGTGCCTGTTaGTGCAGCAACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLLSPPPKCWDYLGPHTGCNCAC*CSNSCC
Trigger: GCAGCAGCTGTTGCTGCAGCAACAGGCACAATTGCA...CCCGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GCTAGGCAAGCAATTTACAGTAGGCTGGACTCCATCCTCTGCCCCTCCCCTTCCTGCTCCAGCTGCTGCTaGTTCTCCAGGTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ARQAIYSRLDSILCPSPSCSSCC*FSRCCS
Trigger: AGAGCAGCACCTGGAGAAGCAGCAGCAGCTGGAGCA...GGAAGGGGAGGGGCAGAGGATGGAGTCCAGCCTACTGTAAATTGCTTGCCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCACCGACCTGGAGATGCTCCAGCTGCTGCTaGTGCTGCAGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LSPIFPGKAGQSLSPTWRCSSCC*CCSCSS
Trigger: GCTGGAGCAGCTGCAGCAGCAGCAGCAGCTGGAGCA...TCTCCAGGTCGGTGAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GACCTCAAGATGGGGTTAAGGCCAGGACCTAGGGTTGAGGTGTGTGTGTGGATGTGTTGCTCCAGCTGCTaGTGCTGCTGCAGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: DLKMGLRPGPRVEVCVWMCCSSC*CCCSCS
Trigger: GGAGCAGCTGCAGCAGCAGCAGCAGCTGGAGCAACA...CATCCACACACACACCTCAACCCTAGGTCCTGGCCTTAACCCCATCTTGAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCTCAGTTGCAGCTCCTGCTaGTGGGCGCCTAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: VTQAICQLTMCLTMTWSLSCSSC*WAPSST
Trigger: GGTGGAGCTAGGCGCCCAGCAGCAGGAGCTGCAACT...GAGGCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCACCGACCTGCGGATCTGCACCTTGTaGCGGAAGCGCTCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: SSQSYFPRQSWAVSFTDLRICTL*RKRSPQ
Trigger: CTGCGGCGAGCGCTTCCGGCACAAGGTGCAGATCCG...CAGGTCGGTGAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GCTACCAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTGCTGGCGCTCGTGCCTaGGGATCTGCACCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: ATKPVLSPIFPGKAGQSLAGARA*GSAPCA
Trigger: GGCACAAGGTGCAGATCCGCAGGCACGAGCGCCAGC...AAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTGGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CCGGGTTTGTATGGTGCTGGAGATGAAAACCAGGGCTTTCTGCTAGGCAAGCAAGCTGGCGCTCGTGCCTaGGGATCTGCACCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: PGLYGAGDENQGFLLGKQAGARA*GSAPCA
Trigger: GGCACAAGGTGCAGATCCGCAGGCACGAGCGCCAGC...TTGCTTGCCTAGCAGAAAGCCCTGGTTTTCATCTCCAGCACCATACAAACCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp TCAGTCTCCTGTCTCCACCTCCCAAGTGCTGGGACTATCTGGGTCCACACACCGTGTTCCTGCACTTGCTaGTGCTGTACCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SVSCLHLPSAGTIWVHTPCSCTC*CCTSCC
Trigger: GCAGCAGCTGGTACAGCAGCAGCAAGTGCAGGAACA...CGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp CCGGGTTTGTATGGTGCTGGAGATGAAAACCAGGGCTTTCTGCTAGGCAAGCAAGGCCCAGCTCCATCCTaGCGGTCACACCAGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PGLYGAGDENQGFLLGKQGPAPS*RSHQGL
Trigger: GAGACCCTGGTGTGACCGCCAGGATGGAGCTGGGCC...TTGCTTGCCTAGCAGAAAGCCCTGGTTTTCATCTCCAGCACCATACAAACCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212355.2
CDS-3UTR CCA 90 bp TTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCACCGACCTGGAGATGGTTTGGGGCAGCACCACGTAACCTaGAGGGGCCACCACAACGGT +
Preference number: 4 (lower is better)
Translates to: FSQAKLGSLFHRPGDGLGQHHVT*RGHHNG
Trigger: ACCGTTGTGGTGGCCCCTCCAGGTTACGTGGTGCTG...CCCCAAACCATCTCCAGGTCGGTGAAAGAGACTGCCCAGCTTTGCCTGGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp TCATGTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCTGCCCCATGCAGCTaGCGCTCGTGCCTGCGGATC +
Preference number: 4 (lower is better)
Translates to: SCNPGYLPTHYVPDNDLEPAPCS*RSCLRI
Trigger: GATCCGCAGGCACGAGCGCCAGCTGCATGGGGCAGG...CTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTACATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp GCTACCAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTGGTTGGAGGAGACGCTaGAGCGCTTGCCGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: ATKPVLSPIFPGKAGQSLGWRRR*SACRSH
Trigger: GTGACTGCGGCAAGCGCTTCAGCGTCTCCTCCAACC...AAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTGGTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp GGGTTAAGGCCAGGACCTAGGGTTGAGGTGTGTGTGTGGATGGCGCTAACACCTAAGCTGTGGGTGCTGTaGCTGTTGCTGCTCTTGCGT +
Preference number: 4 (lower is better)
Translates to: GLRPGPRVEVCVWMALTPKLWVL*LLLLLR
Trigger: ACGCAAGAGCAGCAACAGTCACAGCACCCACAGCTT...AGGTGTTAGCGCCATCCACACACACACCTCAACCCTAGGTCCTGGCCTTAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GGGTTAAGGCCAGGACCTAGGGTTGAGGTGTGTGTGTGGATGGCGCTAACACCTTCTTGCTGCTGCTGCTaGGATTCTGGCTGGGATCCT +
Preference number: 4 (lower is better)
Translates to: GLRPGPRVEVCVWMALTPSCCCC*DSGWDP
Trigger: AGGATCCCAGCCAGAATCGCAGCAGCAGCAGCAAGA...AGGTGTTAGCGCCATCCACACACACACCTCAACCCTAGGTCCTGGCCTTAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp TCAGTCTCCTGTCTCCACCTCCCAAGTGCTGGGACTATCTGGGTCCACACACCGAGCAACAGCTGCTGCTaGAACTGTGTCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SVSCLHLPSAGTIWVHTPSNSCC*NCVCCC
Trigger: GCAGCAACAGACACAGTTGCAGCAGCAGCTGTTGCT...CGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CCGGGTTTGTATGGTGCTGGAGATGAAAACCAGGGCTTTCTGCTAGGCAAGCAATGCTCCAGCTGCTGCTaGTGCTGCAGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PGLYGAGDENQGFLLGKQCSSCC*CCSCSS
Trigger: GCTGGAGCAGCTGCAGCAGCAGCAGCAGCTGGAGCA...TTGCTTGCCTAGCAGAAAGCCCTGGTTTTCATCTCCAGCACCATACAAACCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CATGTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCCTTGCCACACTCGCTaGAGATGGTCGGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: HVTQAICQLTMCLTMTWSPCHTR*RWSACP
Trigger: GGGACAGGCCGACCATCTGCAGCGAGTGTGGCAAGG...GCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTACATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCTCTCTTGCCGCACTCACTaGAGAGGTACGGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: VTQAICQLTMCLTMTWSLSCRTH*RGTASP
Trigger: GGGAGAGGCCGTACCTCTGCAGTGAGTGCGGCAAGA...GAGGCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp TCAGTCTCCTGTCTCCACCTCCCAAGTGCTGGGACTATCTGGGTCCACACACCGCTGACGTTTCTGCTCTaGCTGCTGCTTAACTCGGTG +
Preference number: 4 (lower is better)
Translates to: SVSCLHLPSAGTIWVHTPLTFLL*LLLNSV
Trigger: CACCGAGTTAAGCAGCAGCCAGAGCAGAAACGTCAG...CGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp AATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACCCGGTGTGGGTGCGCTaGTGCTGCACGAGCGCCGAG +
Preference number: 4 (lower is better)
Translates to: NDPFLFQFTHTHTHTHTHPVWVR*CCTSAE
Trigger: CTCGGCGCTCGTGCAGCATCAGCGCACCCACACCGG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GACCTCAAGATGGGGTTAAGGCCAGGACCTAGGGTTGAGGTGTGTGTGTGGATGTTTTCCTGCTGTTCTTaGTGGGGCGGAGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: DLKMGLRPGPRVEVCVWMFSCCS*WGGDSC
Trigger: GCAGCTGTCTCCGCCCCAGCAAGAACAGCAGGAAAA...CATCCACACACACACCTCAACCCTAGGTCCTGGCCTTAACCCCATCTTGAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AGTCTCCTGTCTCCACCTCCCAAGTGCTGGGACTATCTGGGTCCACACACCGGGTGCTGTTGCAATAACTaGTGCTGCAACTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SLLSPPPKCWDYLGPHTGCCCNN*CCNCSC
Trigger: GCAGGAACAGTTGCAGCAGCAGTTATTGCAACAGCA...CCCGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCTCTGCAGCTGCTGGTGCTaGTGTAGCTGTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: VTQAICQLTMCLTMTWSLCSCWC*CSCSCC
Trigger: GCAGCAGGAACAGCTACAGCAGCACCAGCAGCTGCA...GAGGCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GCTAGGCAAGCAATTTACAGTAGGCTGGACTCCATCCTCTGCCCCTCCCCTTCCTGGAGAAGCTGTGGGTaGTGTGACTGTTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ARQAIYSRLDSILCPSPSWRSCG*CDCCCS
Trigger: AGAGCAGCAACAGTCACAGCACCCACAGCTTCTCCA...GGAAGGGGAGGGGCAGAGGATGGAGTCCAGCCTACTGTAAATTGCTTGCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp GGGTTAAGGCCAGGACCTAGGGTTGAGGTGTGTGTGTGGATGGCGCTAACACCTCTGACGTTTCTGCTCTaGCTGCTGCTTAACTCGGTG +
Preference number: 4 (lower is better)
Translates to: GLRPGPRVEVCVWMALTPLTFLL*LLLNSV
Trigger: CACCGAGTTAAGCAGCAGCCAGAGCAGAAACGTCAG...AGGTGTTAGCGCCATCCACACACACACCTCAACCCTAGGTCCTGGCCTTAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp AACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCTCAGTCCTGCTGTTCTTGCTaGGGCGGAGACAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: NPGYLPTHYVPDNDLEPQSCCSC*GGDSCC
Trigger: ACAGCAGCTGTCTCCGCCCCAGCAAGAACAGCAGGA...CTGAGGCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp AGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCACCGACCTGCAGCACCACGTAACCTaGAGGGGCCACCACAACGGT +
Preference number: 4 (lower is better)
Translates to: SSQSYFPRQSWAVSFTDLQHHVT*RGHHNG
Trigger: ACCGTTGTGGTGGCCCCTCCAGGTTACGTGGTGCTG...CAGGTCGGTGAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp GCTACCAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTCCACGTCCACCGGCATaGGCTCAAGTTCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: ATKPVLSPIFPGKAGQSLPRPPA*AQVPLP
Trigger: AGGAAGTGGAACTTGAGCTCATGCCGGTGGACGTGG...AAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp AGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCACCGACCTGCCACGTCCACCGGCATaGGCTCAAGTTCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: SSQSYFPRQSWAVSFTDLPRPPA*AQVPLP
Trigger: AGGAAGTGGAACTTGAGCTCATGCCGGTGGACGTGG...CAGGTCGGTGAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp GACCTCAAGATGGGGTTAAGGCCAGGACCTAGGGTTGAGGTGTGTGTGTGGATGCAGGTTGGAATGTTGTaGGAAGCTCTTGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: DLKMGLRPGPRVEVCVWMQVGML*EALAAL
Trigger: GAGTGCGGCAAGAGCTTCTCACAACATTCCAACCTG...CATCCACACACACACCTCAACCCTAGGTCCTGGCCTTAACCCCATCTTGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp CCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACACGGTTGGAGGAGACGCTaGAGCGCTTGCCGCAGTCAC +
Preference number: 4 (lower is better)
Translates to: PFLFQFTHTHTHTHTHTHGWRRR*SACRSH
Trigger: GTGACTGCGGCAAGCGCTTCAGCGTCTCCTCCAACC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp TTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCACCGACCTGGAGATGGTTTGGGGTGCAGCAACAGCTGCTaGTGCAACTGTGTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: FSQAKLGSLFHRPGDGLGCSNSC*CNCVCC
Trigger: GCAACAGACACAGTTGCAGCAGCAGCTGTTGCTGCA...CCCCAAACCATCTCCAGGTCGGTGAAAGAGACTGCCCAGCTTTGCCTGGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GGGTTAAGGCCAGGACCTAGGGTTGAGGTGTGTGTGTGGATGGCGCTAACACCTTTGGTGCTGCAATTGTaGCTGTTGCTGCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: GLRPGPRVEVCVWMALTPLVLQL*LLLQQQ
Trigger: CTGTTGCTGCAGCAACAGGCACAATTGCAGCACCAA...AGGTGTTAGCGCCATCCACACACACACCTCAACCCTAGGTCCTGGCCTTAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp TCAGTCTCCTGTCTCCACCTCCCAAGTGCTGGGACTATCTGGGTCCACACACCGTGCAACTGTTCCTGCTaGTGCAGTAATAGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: SVSCLHLPSAGTIWVHTPCNCSC*CSNSWC
Trigger: GCACCAACTATTACTGCAGCAGCAGGAACAGTTGCA...CGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GCTAGGCAAGCAATTTACAGTAGGCTGGACTCCATCCTCTGCCCCTCCCCTTCCTGCAATAACTGCTGCTaGAACTGTTCCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ARQAIYSRLDSILCPSPSCNNCC*NCSCCC
Trigger: GCAGCAGCAGGAACAGTTGCAGCAGCAGTTATTGCA...GGAAGGGGAGGGGCAGAGGATGGAGTCCAGCCTACTGTAAATTGCTTGCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AGTCTCCTGTCTCCACCTCCCAAGTGCTGGGACTATCTGGGTCCACACACCGGGTTTTGCAATAACTGCTaGTGCTGCAACTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SLLSPPPKCWDYLGPHTGFCNNC*CCNCSC
Trigger: GCAGGAACAGTTGCAGCAGCAGCAGTTATTGCAAAA...CCCGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CATGTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCTCTGGTGGAAGAGGCTaGAGCTGCTGGTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: HVTQAICQLTMCLTMTWSSGGRG*SCWCCC
Trigger: ACAGCAGCACCAGCAGCTGCAGCCTCTTCCACCAGA...GCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GCTACCAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTGCTCCAGCTGCTGCTaGTTCTCCAGGTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ATKPVLSPIFPGKAGQSLCSSCC*FSRCCS
Trigger: AGAGCAGCACCTGGAGAAGCAGCAGCAGCTGGAGCA...AAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTGGTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCTCAGAGTTGCAGCTCTGGCTaGACAGAGGTCAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: NPGYLPTHYVPDNDLEPQSCSSG*TEVSSS
Trigger: ACTGGAGCTGACCTCTGTGCAGCCAGAGCTGCAACT...CTGAGGCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCTCAGTGTTCCTGCACTTGCTaGTGCTGTACCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NPGYLPTHYVPDNDLEPQCSCTC*CCTSCC
Trigger: GCAGCAGCTGGTACAGCAGCAGCAAGTGCAGGAACA...CTGAGGCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GACCTCAAGATGGGGTTAAGGCCAGGACCTAGGGTTGAGGTGTGTGTGTGGATGTGGAGAAGCTGTGGGTaGTGTGACTGTTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: DLKMGLRPGPRVEVCVWMWRSCG*CDCCCS
Trigger: AGAGCAGCAACAGTCACAGCACCCACAGCTTCTCCA...CATCCACACACACACCTCAACCCTAGGTCCTGGCCTTAACCCCATCTTGAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CATGTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCCGGATGCAGAGTTCTaGTGGGCCCTTGTAGAAGGC +
Preference number: 4 (lower is better)
Translates to: HVTQAICQLTMCLTMTWSPDAEF*WALVEG
Trigger: GCCTTCTACAAGGGCCCAGCAGAACTCTGCATCCGG...GCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp TCATGTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGAAAGGTCTGGGTTGCTaGGCCCAGCTCCATCCTGGC +
Preference number: 4 (lower is better)
Translates to: SCNPGYLPTHYVPDNDLEKGLGC*AQLHPG
Trigger: GCCAGGATGGAGCTGGGCCCAGCAACCCAGACCTTT...CTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000212355.2
CDS-3UTR CCA 90 bp GTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCTCCTCTTGTCCAAGTCTTaGCAGCTGCACCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: VTQAICQLTMCLTMTWSLLLSKS*QLHHLQ
Trigger: CTGCAGGTGGTGCAGCTGCCAAGACTTGGACAAGAG...GAGGCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp AGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCACCGACCTGCACTTCCTCGTCCTCTaGTGGAAGAGGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SSQSYFPRQSWAVSFTDLHFLVL*WKRLQL
Trigger: CAGCTGCAGCCTCTTCCACCAGAGGACGAGGAAGTG...CAGGTCGGTGAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp ATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACGCGCCGAGCTCTCGCTaGAGCACTTGGAGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: IHSFSSSHTHTHTHTHTHAPSSR*STWSSR
Trigger: CCTACTGCTCCAAGTGCTTCAGCGAGAGCTCGGCGC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACACACACACACTAAATATTTCATTTGCTCCGGTGTGGGTGCGCTaGTGCTGCACGAGCGCCGAG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHTLNISFAPVWVR*CCTSAE
Trigger: CTCGGCGCTCGTGCAGCATCAGCGCACCCACACCGG...AGCAAATGAAATATTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACACTGCACTCGCAAGTCCTaGGGTTCCTCCTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PFLFQFTHTHTHTHTHTHCTRKS*GSSCSG
Trigger: GCCAGAGCAGGAGGAACCGCAGGACTTGCGAGTGCA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CCGGGTTTGTATGGTGCTGGAGATGAAAACCAGGGCTTTCTGCTAGGCAAGCAATCTTGCTGCTGCTGCTaGGATTCTGGCTGGGATCCT +
Preference number: 4 (lower is better)
Translates to: PGLYGAGDENQGFLLGKQSCCCC*DSGWDP
Trigger: AGGATCCCAGCCAGAATCGCAGCAGCAGCAGCAAGA...TTGCTTGCCTAGCAGAAAGCCCTGGTTTTCATCTCCAGCACCATACAAACCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CATGTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCTGTCCATCTTGCTGCTaGTGCTGCGATTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HVTQAICQLTMCLTMTWSCPSCC*CCDSGW
Trigger: CCAGCCAGAATCGCAGCAGCAGCAGCAAGATGGACA...GCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GCTAGGCAAGCAATTTACAGTAGGCTGGACTCCATCCTCTGCCCCTCCCCTTCCTGCAACTGTTCCTGCTaGTGCAGTAATAGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: ARQAIYSRLDSILCPSPSCNCSC*CSNSWC
Trigger: GCACCAACTATTACTGCAGCAGCAGGAACAGTTGCA...GGAAGGGGAGGGGCAGAGGATGGAGTCCAGCCTACTGTAAATTGCTTGCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GGGTTAAGGCCAGGACCTAGGGTTGAGGTGTGTGTGTGGATGGCGCTAACACCTTGCTGCAACTGTTCCTaGTGCTGTTGCAATAACTGC +
Preference number: 4 (lower is better)
Translates to: GLRPGPRVEVCVWMALTPCCNCS*CCCNNC
Trigger: GCAGTTATTGCAACAGCAGCAGGAACAGTTGCAGCA...AGGTGTTAGCGCCATCCACACACACACCTCAACCCTAGGTCCTGGCCTTAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp TACCAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCGGAAGAGGCTGCAGCTaGTGGTGCTGCTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: YQASSQSYFPRQSWAVSFGRGCS*WCCCSC
Trigger: ACAGCTACAGCAGCACCAGCAGCTGCAGCCTCTTCC...GAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp ATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACTGCAGCTGGCGCTCGTaGCTGCGGATCTGCACCTTG +
Preference number: 4 (lower is better)
Translates to: IHSFSSSHTHTHTHTHTHCSWRS*LRICTL
Trigger: CAAGGTGCAGATCCGCAGGCACGAGCGCCAGCTGCA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp CTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCACCGACCTGGAGAACCTCTTCTTCCTCCTaGCTTTCCTTCCCACCACTG +
Preference number: 4 (lower is better)
Translates to: LSPIFPGKAGQSLSPTWRTSSSS*LSFPPL
Trigger: CAGTGGTGGGAAGGAAAGCCAGGAGGAAGAAGAGGT...TCTCCAGGTCGGTGAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp ATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACAAGCACTGGCTGCTGTaGGTGGCTGCTCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: IHSFSSSHTHTHTHTHTHKHWLL*VAAPLL
Trigger: CAGGAGGGGAGCAGCCACCCACAGCAGCCAGTGCTT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp CCGGGTTTGTATGGTGCTGGAGATGAAAACCAGGGCTTTCTGCTAGGCAAGCAACACCACCTGCAGCTGTaGTTTTGGTTGCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PGLYGAGDENQGFLLGKQHHLQL*FWLLVL
Trigger: CAGCACCAGCAACCAAAACCACAGCTGCAGGTGGTG...TTGCTTGCCTAGCAGAAAGCCCTGGTTTTCATCTCCAGCACCATACAAACCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp TACCAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCCACTTCCTCGTCCTCTaGTGGAAGAGGCTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: YQASSQSYFPRQSWAVSFHFLVL*WKRLQL
Trigger: CAGCTGCAGCCTCTTCCACCAGAGGACGAGGAAGTG...GAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp TACCAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCTCTCCCCAGTGTGTGTaGCTTGGTGTCGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: YQASSQSYFPRQSWAVSFSPQCV*LGVAPG
Trigger: ACCTGGTGCGACACCAAGCCACACACACTGGGGAGA...GAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp CCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACACGTAATAGGCCCCGAATaGGGCTGCAAGCACTGGCTG +
Preference number: 4 (lower is better)
Translates to: PFLFQFTHTHTHTHTHTHVIGPE*GCKHWL
Trigger: CAGCCAGTGCTTGCAGCCTCATTCGGGGCCTATTAC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp AGAATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACTGCCTGTGCTCGGGCTaGCGTTTCTGCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RMIHSFSSSHTHTHTHTHCLCSG*RFCSGC
Trigger: GCAGCCAGAGCAGAAACGTCAGCCCGAGCACAGGCA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp GATGGAAGTCTTCCTTTCTTAAGGATAATTCAAGATACCCAGAAAGACCTCAAGGGCTGGAGCTGGCGCTaGACCTCCCGGAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: DGSLPFLRIIQDTQKDLKGWSWR*TSRSWH
Trigger: GTGCCAGCTCCGGGAGGTTCAGCGCCAGCTCCAGCC...CTTGAGGTCTTTCTGGGTATCTTGAATTATCCTTAAGAAAGGAAGACTTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp TACCAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCTGTCCATCTTGCTGCTaGTGCTGCGATTCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: YQASSQSYFPRQSWAVSFCPSCC*CCDSGW
Trigger: CCAGCCAGAATCGCAGCAGCAGCAGCAAGATGGACA...GAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GCTACCAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTGTTGTCCATCTTGCTaGTGCTGCTGCGATTCTGGC +
Preference number: 4 (lower is better)
Translates to: ATKPVLSPIFPGKAGQSLCCPSC*CCCDSG
Trigger: GCCAGAATCGCAGCAGCAGCAGCAAGATGGACAACA...AAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTGGTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCACCGACCTGGAGATGCTGTTGTCCATCTTaGTGCTGCTGCTGCGATTCT +
Preference number: 4 (lower is better)
Translates to: LSPIFPGKAGQSLSPTWRCCCPS*CCCCDS
Trigger: AGAATCGCAGCAGCAGCAGCAAGATGGACAACAGCA...TCTCCAGGTCGGTGAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp TACCAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCTTTTCCTGCTGTTCTTaGTGGGGCGGAGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: YQASSQSYFPRQSWAVSFFSCCS*WGGDSC
Trigger: GCAGCTGTCTCCGCCCCAGCAAGAACAGCAGGAAAA...GAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACACTGCTGCTGCAGCAGTTaGTGCTGTTGGAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PFLFQFTHTHTHTHTHTHCCCSS*CCWSSC
Trigger: GCAGCTGCTCCAACAGCAGCAACTGCTGCAGCAGCA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCTCAGTGCAGCACCAGTACCTaGTGCTGTAAGTGTTGCTGT +
Preference number: 4 (lower is better)
Translates to: NPGYLPTHYVPDNDLEPQCSTST*CCKCCC
Trigger: ACAGCAACACTTACAGCAGCAGGTACTGGTGCTGCA...CTGAGGCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACACTGCAGCTGCTGGTGCTaGTGTAGCTGTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PFLFQFTHTHTHTHTHTHCSCWC*CSCSCC
Trigger: GCAGCAGGAACAGCTACAGCAGCACCAGCAGCTGCA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp TCATGTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCTTTCCAGCTCTTGCTaGCTCTCCAGCTCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SCNPGYLPTHYVPDNDLELSSSC*LSSSCS
Trigger: TGAGCAGGAGCTGGAGAGGCAGCAAGAGCTGGAAAG...CTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTACATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp ATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACAGGTGCACCTCCTGTTaGTCCAGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IHSFSSSHTHTHTHTHTHRCTSC*SSCCCC
Trigger: GCAGCAGCAGCAGCTGGAGCAACAGGAGGTGCACCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACAGTTGCAGCTCCTGCTaGTGGGCGCCTAGCTCCACC +
Preference number: 4 (lower is better)
Translates to: NDPFLFQFTHTHTHTHTHSCSSC*WAPSST
Trigger: GGTGGAGCTAGGCGCCCAGCAGCAGGAGCTGCAACT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp TACCAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCAGTTGCAGCTCTGGCTaGACAGAGGTCAGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: YQASSQSYFPRQSWAVSFSCSSG*TEVSSS
Trigger: ACTGGAGCTGACCTCTGTGCAGCCAGAGCTGCAACT...GAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACCCTTGCCACACTCGCTaGAGATGGTCGGCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: NDPFLFQFTHTHTHTHTHPCHTR*RWSACP
Trigger: GGGACAGGCCGACCATCTGCAGCGAGTGTGGCAAGG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp CCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACACTCCAACACAAAGGTCTaGGTTGCTGGGCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PFLFQFTHTHTHTHTHTHSNTKV*VAGPSS
Trigger: GGAGCTGGGCCCAGCAACCCAGACCTTTGTGTTGGA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp ATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACGAGGGTGTCAGGCCCTaGACCCCCATCCTCAAGACA +
Preference number: 4 (lower is better)
Translates to: IHSFSSSHTHTHTHTHTHEGVRP*TPILKT
Trigger: TGTCTTGAGGATGGGGGTCCAGGGCCTGACACCCTC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp TACCAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCTGTTGTCCATCTTGCTaGTGCTGCTGCGATTCTGGC +
Preference number: 4 (lower is better)
Translates to: YQASSQSYFPRQSWAVSFCCPSC*CCCDSG
Trigger: GCCAGAATCGCAGCAGCAGCAGCAAGATGGACAACA...GAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CCGGGTTTGTATGGTGCTGGAGATGAAAACCAGGGCTTTCTGCTAGGCAAGCAATGCTGTTGTCCATCTTaGTGCTGCTGCTGCGATTCT +
Preference number: 4 (lower is better)
Translates to: PGLYGAGDENQGFLLGKQCCCPS*CCCCDS
Trigger: AGAATCGCAGCAGCAGCAGCAAGATGGACAACAGCA...TTGCTTGCCTAGCAGAAAGCCCTGGTTTTCATCTCCAGCACCATACAAACCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GACCTCAAGATGGGGTTAAGGCCAGGACCTAGGGTTGAGGTGTGTGTGTGGATGAGCTGCATCATCTGGTaGTGCTGCAGCAATAAATGT +
Preference number: 4 (lower is better)
Translates to: DLKMGLRPGPRVEVCVWMSCIIW*CCSNKC
Trigger: ACATTTATTGCTGCAGCAGCACCAGATGATGCAGCT...CATCCACACACACACCTCAACCCTAGGTCCTGGCCTTAACCCCATCTTGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp ATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACTGCTGCAGCAGTTGCTaGTGTTGGAGCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: IHSFSSSHTHTHTHTHTHCCSSC*CWSSCC
Trigger: GCAGCAGCTGCTCCAACAGCAGCAACTGCTGCAGCA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp ATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACTGCTGCTGCAGCAGTTaGTGCTGTTGGAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: IHSFSSSHTHTHTHTHTHCCCSS*CCWSSC
Trigger: GCAGCTGCTCCAACAGCAGCAACTGCTGCAGCAGCA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACACAACTGTCCCTGCTGCTaGAGCAGTTGCTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: PFLFQFTHTHTHTHTHTHNCPCC*SSCCCW
Trigger: CCAACAGCAGCAACTGCTGCAGCAGCAGGGACAGTT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CCGGGTTTGTATGGTGCTGGAGATGAAAACCAGGGCTTTCTGCTAGGCAAGCAAAGCACCAGTACCTGCTaGTGTAAGTGTTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: PGLYGAGDENQGFLLGKQSTSTC*CKCCCC
Trigger: GCAACAGCAACACTTACAGCAGCAGGTACTGGTGCT...TTGCTTGCCTAGCAGAAAGCCCTGGTTTTCATCTCCAGCACCATACAAACCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp TCATGTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGTGCAGCAATAGTTGCTaGTGTAGCTGTCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SCNPGYLPTHYVPDNDLECSNSC*CSCPCG
Trigger: GCCACAGGGACAGCTACAGCAGCAACTATTGCTGCA...CTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTACATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCTCTGTGTCTGTTGCTGCTaGAGCAATAGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VTQAICQLTMCLTMTWSLCVCCC*SNSCCC
Trigger: ACAGCAGCAACTATTGCTGCAGCAGCAACAGACACA...GAGGCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp TACCAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCAGCAACAGCTGCTGCTaGAACTGTGTCTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: YQASSQSYFPRQSWAVSFSNSCC*NCVCCC
Trigger: GCAGCAACAGACACAGTTGCAGCAGCAGCTGTTGCT...GAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp TCATGTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGTGCAGCAACAGCTGCTaGTGCAACTGTGTCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SCNPGYLPTHYVPDNDLECSNSC*CNCVCC
Trigger: GCAACAGACACAGTTGCAGCAGCAGCTGTTGCTGCA...CTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTACATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CCGGGTTTGTATGGTGCTGGAGATGAAAACCAGGGCTTTCTGCTAGGCAAGCAATGCAATAACTGCTGCTaGTGCAACTGTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PGLYGAGDENQGFLLGKQCNNCC*CNCSCC
Trigger: GCAGCAGGAACAGTTGCAGCAGCAGCAGTTATTGCA...TTGCTTGCCTAGCAGAAAGCCCTGGTTTTCATCTCCAGCACCATACAAACCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCACCGACCTGTGCAATAACTGCTGCTaGTGCAACTGTTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SSQSYFPRQSWAVSFTDLCNNCC*CNCSCC
Trigger: GCAGCAGGAACAGTTGCAGCAGCAGCAGTTATTGCA...CAGGTCGGTGAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACTCTTGCCGCACTCACTaGAGAGGTACGGCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: NDPFLFQFTHTHTHTHTHSCRTH*RGTASP
Trigger: GGGAGAGGCCGTACCTCTGCAGTGAGTGCGGCAAGA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GACCTCAAGATGGGGTTAAGGCCAGGACCTAGGGTTGAGGTGTGTGTGTGGATGTGCTGTTGTAACAGTTaGTTTTGGAGAAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: DLKMGLRPGPRVEVCVWMCCCNS*FWRSCG
Trigger: CCCACAGCTTCTCCAAAAGCAACTGTTACAACAGCA...CATCCACACACACACCTCAACCCTAGGTCCTGGCCTTAACCCCATCTTGAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp TCATGTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGGTTGCTGGTGCTGCATaGGCCAGTTTTCCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SCNPGYLPTHYVPDNDLEVAGAA*ASFPAV
Trigger: AACAGCAGGAAAACTGGCCCATGCAGCACCAGCAAC...CTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp GATGGAAGTCTTCCTTTCTTAAGGATAATTCAAGATACCCAGAAAGACCTCAAGCCTGCCCCATGCAGCTaGCGCTCGTGCCTGCGGATC +
Preference number: 4 (lower is better)
Translates to: DGSLPFLRIIQDTQKDLKPAPCS*RSCLRI
Trigger: GATCCGCAGGCACGAGCGCCAGCTGCATGGGGCAGG...CTTGAGGTCTTTCTGGGTATCTTGAATTATCCTTAAGAAAGGAAGACTTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACCACAAAGGTCTGGGTTaGTGGGCCCAGCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: NDPFLFQFTHTHTHTHTHHKGLG*WAQLHP
Trigger: AGGATGGAGCTGGGCCCAGCAACCCAGACCTTTGTG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212355.2
CDS-3UTR GCA 90 bp GTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCTCTGCATCATCTGGTGCTaGTGCAGCAATAAATGTTGC +
Preference number: 4 (lower is better)
Translates to: VTQAICQLTMCLTMTWSLCIIWC*CSNKCC
Trigger: GCAACATTTATTGCTGCAGCAGCACCAGATGATGCA...GAGGCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp TCATGTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGTTGGTGCTGCAATTGTaGCTGTTGCTGCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: SCNPGYLPTHYVPDNDLELVLQL*LLLQQQ
Trigger: CTGTTGCTGCAGCAACAGGCACAATTGCAGCACCAA...CTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCACCGACCTGGAGATTTTGCAATAACTGCTaGTGCTGCAACTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LSPIFPGKAGQSLSPTWRFCNNC*CCNCSC
Trigger: GCAGGAACAGTTGCAGCAGCAGCAGTTATTGCAAAA...TCTCCAGGTCGGTGAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCTCAGTGCTTTTGCAATAACTaGTGCTGCTGCAACTGTTCC +
Preference number: 4 (lower is better)
Translates to: NPGYLPTHYVPDNDLEPQCFCNN*CCCNCS
Trigger: GGAACAGTTGCAGCAGCAGCAGTTATTGCAAAAGCA...CTGAGGCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACTCTGGTGGAAGAGGCTaGAGCTGCTGGTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: NDPFLFQFTHTHTHTHTHSGGRG*SCWCCC
Trigger: ACAGCAGCACCAGCAGCTGCAGCCTCTTCCACCAGA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GATGGAAGTCTTCCTTTCTTAAGGATAATTCAAGATACCCAGAAAGACCTCAAGCGGATCTGCACCTTGTaGCGGAAGCGCTCGCCGCAG +
Preference number: 4 (lower is better)
Translates to: DGSLPFLRIIQDTQKDLKRICTL*RKRSPQ
Trigger: CTGCGGCGAGCGCTTCCGGCACAAGGTGCAGATCCG...CTTGAGGTCTTTCTGGGTATCTTGAATTATCCTTAAGAAAGGAAGACTTCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AGTCTTCCTTTCTTAAGGATAATTCAAGATACCCAGAAAGACCTCAAGATGGGGTGCAGCTGGCGCTCGTaGCTGCGGATCTGCACCTTG +
Preference number: 4 (lower is better)
Translates to: SLPFLRIIQDTQKDLKMGCSWRS*LRICTL
Trigger: CAAGGTGCAGATCCGCAGGCACGAGCGCCAGCTGCA...CCCCATCTTGAGGTCTTTCTGGGTATCTTGAATTATCCTTAAGAAAGGAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GACCTCAAGATGGGGTTAAGGCCAGGACCTAGGGTTGAGGTGTGTGTGTGGATGACAGGTTCATATACTTaGTGCTGCACAAGATACTGC +
Preference number: 4 (lower is better)
Translates to: DLKMGLRPGPRVEVCVWMTGSYT*CCTRYC
Trigger: GCAGTATCTTGTGCAGCAGCAAGTATATGAACCTGT...CATCCACACACACACCTCAACCCTAGGTCCTGGCCTTAACCCCATCTTGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCTCTGCTGTTGTAACAGTTaGTTTTGGAGAAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: VTQAICQLTMCLTMTWSLCCCNS*FWRSCG
Trigger: CCCACAGCTTCTCCAAAAGCAACTGTTACAACAGCA...GAGGCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp ATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACCTGCAGCTGTGGTTTTaGTTGCTGGTGCTGCATGGG +
Preference number: 4 (lower is better)
Translates to: IHSFSSSHTHTHTHTHTHLQLWF*LLVLHG
Trigger: CCCATGCAGCACCAGCAACCAAAACCACAGCTGCAG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp GATGGAAGTCTTCCTTTCTTAAGGATAATTCAAGATACCCAGAAAGACCTCAAGGGGCCACCACAACGGTaGCTGGAGCTGGCGCTGAAC +
Preference number: 4 (lower is better)
Translates to: DGSLPFLRIIQDTQKDLKGPPQR*LELALN
Trigger: GTTCAGCGCCAGCTCCAGCCACCGTTGTGGTGGCCC...CTTGAGGTCTTTCTGGGTATCTTGAATTATCCTTAAGAAAGGAAGACTTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp CCGGGTTTGTATGGTGCTGGAGATGAAAACCAGGGCTTTCTGCTAGGCAAGCAAACAAGATACTGCTGTTaGATTTGCTGCAGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: PGLYGAGDENQGFLLGKQTRYCC*ICCSCS
Trigger: GCTGCAACTGCAGCAAATTCAACAGCAGTATCTTGT...TTGCTTGCCTAGCAGAAAGCCCTGGTTTTCATCTCCAGCACCATACAAACCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp CATGTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCACAAGATACTGCTGTTaGATTTGCTGCAGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: HVTQAICQLTMCLTMTWSTRYCC*ICCSCS
Trigger: GCTGCAACTGCAGCAAATTCAACAGCAGTATCTTGT...GCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp AATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACAGGTGCTGCTCTAGCTaGCGTAGCTGCTCCTGCATT +
Preference number: 4 (lower is better)
Translates to: NDPFLFQFTHTHTHTHTHRCCSS*RSCSCI
Trigger: AATGCAGGAGCAGCTACGTCAGCTAGAGCAGCACCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp AATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACAAGCTGTGGGTGCTGTaGCTGTTGCTGCTCTTGCGT +
Preference number: 4 (lower is better)
Translates to: NDPFLFQFTHTHTHTHTHKLWVL*LLLLLR
Trigger: ACGCAAGAGCAGCAACAGTCACAGCACCCACAGCTT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AGAATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACAGCTGTGGTTTTGGTTaGTGGTGCTGCATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RMIHSFSSSHTHTHTHTHSCGFG*WCCMGQ
Trigger: CTGGCCCATGCAGCACCAGCAACCAAAACCACAGCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACACAGCACCAGTACCTGCTaGTGTAAGTGTTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: PFLFQFTHTHTHTHTHTHSTSTC*CKCCCC
Trigger: GCAACAGCAACACTTACAGCAGCAGGTACTGGTGCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AGAATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACAGTCTTTCCAGCTCTTaGTGCCTCTCCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RMIHSFSSSHTHTHTHTHSLSSS*CLSSSC
Trigger: GCAGGAGCTGGAGAGGCAGCAAGAGCTGGAAAGACT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp ATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACTCCTGCATTTTTAGCTaGAGCTGCCGCTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: IHSFSSSHTHTHTHTHTHSCIFS*SCRCSC
Trigger: GCAGGAACAGCGGCAGCTGCAGCTAAAAATGCAGGA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACACACACACACTAAATATTTCATTTGCTAGGTGCACCTCCTGTTaGTCCAGCTGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHTLNISFARCTSC*SSCCCC
Trigger: GCAGCAGCAGCAGCTGGAGCAACAGGAGGTGCACCT...AGCAAATGAAATATTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp TCATGTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCGGTTCCTCCTGCTCTaGCTCAATATAGTAATAGGC +
Preference number: 4 (lower is better)
Translates to: SCNPGYLPTHYVPDNDLERFLLL*LNIVIG
Trigger: GCCTATTACTATATTGAGCCAGAGCAGGAGGAACCG...CTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp AATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACCACCACCTGCAGCTGTaGTTTTGGTTGCTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: NDPFLFQFTHTHTHTHTHHHLQL*FWLLVL
Trigger: CAGCACCAGCAACCAAAACCACAGCTGCAGGTGGTG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp AGAATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACCAGGTTGGAATGTTGTaGGAAGCTCTTGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: RMIHSFSSSHTHTHTHTHQVGML*EALAAL
Trigger: GAGTGCGGCAAGAGCTTCTCACAACATTCCAACCTG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GATGGAAGTCTTCCTTTCTTAAGGATAATTCAAGATACCCAGAAAGACCTCAAGTGCGGTTGCTGCTCTTaGAACTGCCTGTGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: DGSLPFLRIIQDTQKDLKCGCCS*NCLCSG
Trigger: GCCCGAGCACAGGCAGTTGCAAGAGCAGCAACCGCA...CTTGAGGTCTTTCTGGGTATCTTGAATTATCCTTAAGAAAGGAAGACTTCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACTGCAGCAATAGTTGCTaGTGTAGCTGTCCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: NDPFLFQFTHTHTHTHTHCSNSC*CSCPCG
Trigger: GCCACAGGGACAGCTACAGCAGCAACTATTGCTGCA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp TCATGTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGTGCTGTAGCTGTTCCTaGTGCTTTTGCAATAACTGC +
Preference number: 4 (lower is better)
Translates to: SCNPGYLPTHYVPDNDLECCSCS*CFCNNC
Trigger: GCAGTTATTGCAAAAGCAGCAGGAACAGCTACAGCA...CTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACTCCTGCATTTTTAGCTaGAGCTGCCGCTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: NDPFLFQFTHTHTHTHTHSCIFS*SCRCSC
Trigger: GCAGGAACAGCGGCAGCTGCAGCTAAAAATGCAGGA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp ATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACAATGGCAGTTGTTCCTaGACTTGCTGCTGCTGTACC +
Preference number: 4 (lower is better)
Translates to: IHSFSSSHTHTHTHTHTHNGSCS*TCCCCT
Trigger: GGTACAGCAGCAGCAAGTGCAGGAACAACTGCCATT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACACACACACACTAAATATTTCATTTGCTTCCTGCTGTTCTTGCTaGGGCGGAGACAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHTLNISFASCCSC*GGDSCC
Trigger: ACAGCAGCTGTCTCCGCCCCAGCAAGAACAGCAGGA...AGCAAATGAAATATTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACACACACACACTAAATATTTCATTTGCTTCTCCCCAGTGTGTGTaGCTTGGTGTCGCACCAGGT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHTLNISFASPQCV*LGVAPG
Trigger: ACCTGGTGCGACACCAAGCCACACACACTGGGGAGA...AGCAAATGAAATATTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACACACACACACTAAATATTTCATTTGCTGATGCAGAGTTCTGCTaGGCCCTTGTAGAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHTLNISFADAEFC*ALVEGP
Trigger: CGGGCCTTCTACAAGGGCCCAGCAGAACTCTGCATC...AGCAAATGAAATATTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp CACACACACACACACACACACACACACACACACACACTAAATATTTCATTTGCTAGGTGCTGCTCTAGCTaGCGTAGCTGCTCCTGCATT +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHTLNISFARCCSS*RSCSCI
Trigger: AATGCAGGAGCAGCTACGTCAGCTAGAGCAGCACCT...AGCAAATGAAATATTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR TCA 90 bp CACACTAAATATTTCATTTGCTGGTTAGTGTTTGGTTGTATCAAATCTCACGAGCAGCGGGCAGCACCATaGGCTCTTGCAGCACCACGT +
Preference number: 4 (lower is better)
Translates to: HTKYFICWLVFGCIKSHEQRAAP*ALAAPR
Trigger: ACGTGGTGCTGCAAGAGCTCATGGTGCTGCCCGCTG...CTCGTGAGATTTGATACAACCAAACACTAACCAGCAAATGAAATATTTAGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp TCATGTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGATCATCTGGTGCTGCTaGAGCAATAAATGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: SCNPGYLPTHYVPDNDLEIIWCC*SNKCCS
Trigger: AGAGCAACATTTATTGCTGCAGCAGCACCAGATGAT...CTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp TACCAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCATCATCTGGTGCTGCTaGAGCAATAAATGTTGCTCT +
Preference number: 4 (lower is better)
Translates to: YQASSQSYFPRQSWAVSFIIWCC*SNKCCS
Trigger: AGAGCAACATTTATTGCTGCAGCAGCACCAGATGAT...GAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACACACACACACTAAATATTTCATTTGCTAACTGTCCCTGCTGCTaGAGCAGTTGCTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHTLNISFANCPCC*SSCCCW
Trigger: CCAACAGCAGCAACTGCTGCAGCAGCAGGGACAGTT...AGCAAATGAAATATTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACTGTAAGTGTTGCTGTTaGAACTGTCCCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NDPFLFQFTHTHTHTHTHCKCCC*NCPCCC
Trigger: GCAGCAGCAGGGACAGTTGCAACAGCAACACTTACA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp ATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACTGCTGTTGCAATAACTaGTGCTGCAACTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: IHSFSSSHTHTHTHTHTHCCCNN*CCNCSC
Trigger: GCAGGAACAGTTGCAGCAGCAGTTATTGCAACAGCA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp ATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACTGCTGCAACTGTTCCTaGTGCTGTTGCAATAACTGC +
Preference number: 4 (lower is better)
Translates to: IHSFSSSHTHTHTHTHTHCCNCS*CCCNNC
Trigger: GCAGTTATTGCAACAGCAGCAGGAACAGTTGCAGCA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AGTCTTCCTTTCTTAAGGATAATTCAAGATACCCAGAAAGACCTCAAGATGGGGACTTGGAGCAGTAGGTaGAGGCATAGGGCTTCTCGC +
Preference number: 4 (lower is better)
Translates to: SLPFLRIIQDTQKDLKMGTWSSR*RHRASR
Trigger: GCGAGAAGCCCTATGCCTGCACCTACTGCTCCAAGT...CCCCATCTTGAGGTCTTTCTGGGTATCTTGAATTATCCTTAAGAAAGGAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GCTACCAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTAACAGCTTCTGCTCTTaGACTTGTTGTAACTGCAAT +
Preference number: 4 (lower is better)
Translates to: ATKPVLSPIFPGKAGQSLNSFCS*TCCNCN
Trigger: ATTGCAGTTACAACAAGTGCAAGAGCAGAAGCTGTT...AAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTGGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp CACACACACACACACACACACACACACACACACACACTAAATATTTCATTTGCTCTCTTGTCCAAGTCTTaGCAGCTGCACCACCTGCAG +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHTLNISFALLSKS*QLHHLQ
Trigger: CTGCAGGTGGTGCAGCTGCCAAGACTTGGACAAGAG...AGCAAATGAAATATTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp AATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACGGTGGGTCACCAGGTTaGAATGTTGTGAGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: NDPFLFQFTHTHTHTHTHGGSPG*NVVRSS
Trigger: AGAGCTTCTCACAACATTCCAACCTGGTGACCCACC...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp CCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACACTGTAACAGTTGCTTTTaGAGAAGCTGTGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: PFLFQFTHTHTHTHTHTHCNSCF*RSCGCC
Trigger: ACAGCACCCACAGCTTCTCCAAAAGCAACTGTTACA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GATGGAAGTCTTCCTTTCTTAAGGATAATTCAAGATACCCAGAAAGACCTCAAGAGCTGTGGTTTTGGTTaGTGGTGCTGCATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: DGSLPFLRIIQDTQKDLKSCGFG*WCCMGQ
Trigger: CTGGCCCATGCAGCACCAGCAACCAAAACCACAGCT...CTTGAGGTCTTTCTGGGTATCTTGAATTATCCTTAAGAAAGGAAGACTTCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AGTCTTCCTTTCTTAAGGATAATTCAAGATACCCAGAAAGACCTCAAGATGGGGTGCAATTGTGCCTGTTaGTGCAGCAACAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLPFLRIIQDTQKDLKMGCNCAC*CSNSCC
Trigger: GCAGCAGCTGTTGCTGCAGCAACAGGCACAATTGCA...CCCCATCTTGAGGTCTTTCTGGGTATCTTGAATTATCCTTAAGAAAGGAAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACAATAACTGCTGCTGCTaGAACTGTTCCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: NDPFLFQFTHTHTHTHTHNNCCC*NCSCCC
Trigger: ACAGCAGCAGGAACAGTTGCAGCAGCAGCAGTTATT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp ATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACTGCTGTAGCTGTTCCTaGTGCTTTTGCAATAACTGC +
Preference number: 4 (lower is better)
Translates to: IHSFSSSHTHTHTHTHTHCCSCS*CFCNNC
Trigger: GCAGTTATTGCAAAAGCAGCAGGAACAGCTACAGCA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AGAATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACAGCTGCATCATCTGGTaGTGCTGCAGCAATAAATGT +
Preference number: 4 (lower is better)
Translates to: RMIHSFSSSHTHTHTHTHSCIIW*CCSNKC
Trigger: ACATTTATTGCTGCAGCAGCACCAGATGATGCAGCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACACACACACACTAAATATTTCATTTGCTTGTAAGTGTTGCTGTTaGAACTGTCCCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHTLNISFACKCCC*NCPCCC
Trigger: GCAGCAGCAGGGACAGTTGCAACAGCAACACTTACA...AGCAAATGAAATATTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CACACTAAATATTTCATTTGCTGGTTAGTGTTTGGTTGTATCAAATCTCACGAGGGAAGAGGCTGCAGCTaGTGGTGCTGCTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: HTKYFICWLVFGCIKSHEGRGCS*WCCCSC
Trigger: ACAGCTACAGCAGCACCAGCAGCTGCAGCCTCTTCC...CTCGTGAGATTTGATACAACCAAACACTAACCAGCAAATGAAATATTTAGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AGTCTTCCTTTCTTAAGGATAATTCAAGATACCCAGAAAGACCTCAAGATGGGGAATGGCAGTTGTTCCTaGACTTGCTGCTGCTGTACC +
Preference number: 4 (lower is better)
Translates to: SLPFLRIIQDTQKDLKMGNGSCS*TCCCCT
Trigger: GGTACAGCAGCAGCAAGTGCAGGAACAACTGCCATT...CCCCATCTTGAGGTCTTTCTGGGTATCTTGAATTATCCTTAAGAAAGGAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp ATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACAGCAGCAACTGTCTCTaGTGTTGTAACAGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: IHSFSSSHTHTHTHTHTHSSNCL*CCNSCF
Trigger: AAAGCAACTGTTACAACAGCAGAGACAGTTGCTGCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp AATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACTGTAACAGTTGCTTTTaGAGAAGCTGTGGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: NDPFLFQFTHTHTHTHTHCNSCF*RSCGCC
Trigger: ACAGCACCCACAGCTTCTCCAAAAGCAACTGTTACA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp CACACTAAATATTTCATTTGCTGGTTAGTGTTTGGTTGTATCAAATCTCACGAGGATGCAGAGTTCTGCTaGGCCCTTGTAGAAGGCCCG +
Preference number: 4 (lower is better)
Translates to: HTKYFICWLVFGCIKSHEDAEFC*ALVEGP
Trigger: CGGGCCTTCTACAAGGGCCCAGCAGAACTCTGCATC...CTCGTGAGATTTGATACAACCAAACACTAACCAGCAAATGAAATATTTAGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AGTCTTCCTTTCTTAAGGATAATTCAAGATACCCAGAAAGACCTCAAGATGGGGAATAACTGCTGCTGCTaGAACTGTTCCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SLPFLRIIQDTQKDLKMGNNCCC*NCSCCC
Trigger: ACAGCAGCAGGAACAGTTGCAGCAGCAGCAGTTATT...CCCCATCTTGAGGTCTTTCTGGGTATCTTGAATTATCCTTAAGAAAGGAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACAGCAGCAACTGTCTCTaGTGTTGTAACAGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: NDPFLFQFTHTHTHTHTHSSNCL*CCNSCF
Trigger: AAAGCAACTGTTACAACAGCAGAGACAGTTGCTGCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp AGTCTTCCTTTCTTAAGGATAATTCAAGATACCCAGAAAGACCTCAAGATGGGGCGGTTCCTCCTGCTCTaGCTCAATATAGTAATAGGC +
Preference number: 4 (lower is better)
Translates to: SLPFLRIIQDTQKDLKMGRFLLL*LNIVIG
Trigger: GCCTATTACTATATTGAGCCAGAGCAGGAGGAACCG...CCCCATCTTGAGGTCTTTCTGGGTATCTTGAATTATCCTTAAGAAAGGAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp CACACTAAATATTTCATTTGCTGGTTAGTGTTTGGTTGTATCAAATCTCACGAGCTGCAGCTGTGGTTTTaGTTGCTGGTGCTGCATGGG +
Preference number: 4 (lower is better)
Translates to: HTKYFICWLVFGCIKSHELQLWF*LLVLHG
Trigger: CCCATGCAGCACCAGCAACCAAAACCACAGCTGCAG...CTCGTGAGATTTGATACAACCAAACACTAACCAGCAAATGAAATATTTAGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp GATGGAAGTCTTCCTTTCTTAAGGATAATTCAAGATACCCAGAAAGACCTCAAGGGTGGGTCACCAGGTTaGAATGTTGTGAGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: DGSLPFLRIIQDTQKDLKGGSPG*NVVRSS
Trigger: AGAGCTTCTCACAACATTCCAACCTGGTGACCCACC...CTTGAGGTCTTTCTGGGTATCTTGAATTATCCTTAAGAAAGGAAGACTTCCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp AGTCTTCCTTTCTTAAGGATAATTCAAGATACCCAGAAAGACCTCAAGATGGGGTGCATCATCTGGTGCTaGTGCAGCAATAAATGTTGC +
Preference number: 4 (lower is better)
Translates to: SLPFLRIIQDTQKDLKMGCIIWC*CSNKCC
Trigger: GCAACATTTATTGCTGCAGCAGCACCAGATGATGCA...CCCCATCTTGAGGTCTTTCTGGGTATCTTGAATTATCCTTAAGAAAGGAAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp CACACTAAATATTTCATTTGCTGGTTAGTGTTTGGTTGTATCAAATCTCACGAGACCTCTTCTTCCTCCTaGCTTTCCTTCCCACCACTG +
Preference number: 4 (lower is better)
Translates to: HTKYFICWLVFGCIKSHETSSSS*LSFPPL
Trigger: CAGTGGTGGGAAGGAAAGCCAGGAGGAAGAAGAGGT...CTCGTGAGATTTGATACAACCAAACACTAACCAGCAAATGAAATATTTAGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CCA 90 bp CACACTAAATATTTCATTTGCTGGTTAGTGTTTGGTTGTATCAAATCTCACGAGGTTGCTGGTGCTGCATaGGCCAGTTTTCCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: HTKYFICWLVFGCIKSHEVAGAA*ASFPAV
Trigger: AACAGCAGGAAAACTGGCCCATGCAGCACCAGCAAC...CTCGTGAGATTTGATACAACCAAACACTAACCAGCAAATGAAATATTTAGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CACACTAAATATTTCATTTGCTGGTTAGTGTTTGGTTGTATCAAATCTCACGAGTGCAATAACTGCTGCTaGAACTGTTCCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HTKYFICWLVFGCIKSHECNNCC*NCSCCC
Trigger: GCAGCAGCAGGAACAGTTGCAGCAGCAGTTATTGCA...CTCGTGAGATTTGATACAACCAAACACTAACCAGCAAATGAAATATTTAGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GATGGAAGTCTTCCTTTCTTAAGGATAATTCAAGATACCCAGAAAGACCTCAAGTGCTTTTGCAATAACTaGTGCTGCTGCAACTGTTCC +
Preference number: 4 (lower is better)
Translates to: DGSLPFLRIIQDTQKDLKCFCNN*CCCNCS
Trigger: GGAACAGTTGCAGCAGCAGCAGTTATTGCAAAAGCA...CTTGAGGTCTTTCTGGGTATCTTGAATTATCCTTAAGAAAGGAAGACTTCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GATGGAAGTCTTCCTTTCTTAAGGATAATTCAAGATACCCAGAAAGACCTCAAGTGTAGCTGTTCCTGCTaGTTTTGCAATAACTGCTGC +
Preference number: 4 (lower is better)
Translates to: DGSLPFLRIIQDTQKDLKCSCSC*FCNNCC
Trigger: GCAGCAGTTATTGCAAAAGCAGCAGGAACAGCTACA...CTTGAGGTCTTTCTGGGTATCTTGAATTATCCTTAAGAAAGGAAGACTTCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CACACACACACACACACACACACACACACACACACACTAAATATTTCATTTGCTTGTTGCAACAGCTTCTaGTCTTGCACTTGTTGTAAC +
Preference number: 4 (lower is better)
Translates to: HTHTHTHTHTHTLNISFACCNSF*SCTCCN
Trigger: GTTACAACAAGTGCAAGAGCAGAAGCTGTTGCAACA...AGCAAATGAAATATTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CACACTAAATATTTCATTTGCTGGTTAGTGTTTGGTTGTATCAAATCTCACGAGTGTGTCTGTTGCTGCTaGAGCAATAGTTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: HTKYFICWLVFGCIKSHECVCCC*SNSCCC
Trigger: ACAGCAGCAACTATTGCTGCAGCAGCAACAGACACA...CTCGTGAGATTTGATACAACCAAACACTAACCAGCAAATGAAATATTTAGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp GATGGAAGTCTTCCTTTCTTAAGGATAATTCAAGATACCCAGAAAGACCTCAAGTGTTGCAACAGCTTCTaGTCTTGCACTTGTTGTAAC +
Preference number: 4 (lower is better)
Translates to: DGSLPFLRIIQDTQKDLKCCNSF*SCTCCN
Trigger: GTTACAACAAGTGCAAGAGCAGAAGCTGTTGCAACA...CTTGAGGTCTTTCTGGGTATCTTGAATTATCCTTAAGAAAGGAAGACTTCCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CACACTAAATATTTCATTTGCTGGTTAGTGTTTGGTTGTATCAAATCTCACGAGACAGGTTCATATACTTaGTGCTGCACAAGATACTGC +
Preference number: 4 (lower is better)
Translates to: HTKYFICWLVFGCIKSHETGSYT*CCTRYC
Trigger: GCAGTATCTTGTGCAGCAGCAAGTATATGAACCTGT...CTCGTGAGATTTGATACAACCAAACACTAACCAGCAAATGAAATATTTAGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR GCA 90 bp CACACTAAATATTTCATTTGCTGGTTAGTGTTTGGTTGTATCAAATCTCACGAGAACAGCTTCTGCTCTTaGACTTGTTGTAACTGCAAT +
Preference number: 4 (lower is better)
Translates to: HTKYFICWLVFGCIKSHENSFCS*TCCNCN
Trigger: ATTGCAGTTACAACAAGTGCAAGAGCAGAAGCTGTT...CTCGTGAGATTTGATACAACCAAACACTAACCAGCAAATGAAATATTTAGTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp CCAGGCCTCGGGAGCGTCCTGCCCCATGCAGCTGGCGCTCGTGCCTaGGGATCTGCACCTTGTGCCGGAAGCGCTCGCCGCAGTCCTCGC +
Preference number: 5 (lower is better)
Translates to: PGLGSVLPHAAGARA*GSAPCAGSARRSPR
Trigger: GCGAGGACTGCGGCGAGCGCTTCCGGCACAAGGTGCAGATCCGCAGGCACGAGCGCCAGCTGCATGGGGCAGGACGCTCCCGAGGCCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp CCCGGGCCTGGAGGACCGCAGGAGTCCCAGGCCTCGGGAGCGTCCTaGCCCATGCAGCTGGCGCTCGTGCCTGCGGATCTGCACCTTGTG +
Preference number: 5 (lower is better)
Translates to: PGPGGPQESQASGAS*PMQLALVPADLHLV
Trigger: CACAAGGTGCAGATCCGCAGGCACGAGCGCCAGCTGCATGGGGCAGGACGCTCCCGAGGCCTGGGACTCCTGCGGTCCTCCAGGCCCGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp AGTCCCAGGCCTCGGGAGCGTCCTGCCCCATGCAGCTGGCGCTCGTaGCTGCGGATCTGCACCTTGTGCCGGAAGCGCTCGCCGCAGTCC +
Preference number: 5 (lower is better)
Translates to: SPRPRERPAPCSWRS*LRICTLCRKRSPQS
Trigger: GGACTGCGGCGAGCGCTTCCGGCACAAGGTGCAGATCCGCAGGCACGAGCGCCAGCTGCATGGGGCAGGACGCTCCCGAGGCCTGGGACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CCA 90 bp GACCGCAGGAGTCCCAGGCCTCGGGAGCGTCCTGCCCCATGCAGCTaGCGCTCGTGCCTGCGGATCTGCACCTTGTGCCGGAAGCGCTCG +
Preference number: 5 (lower is better)
Translates to: DRRSPRPRERPAPCS*RSCLRICTLCRKRS
Trigger: CGAGCGCTTCCGGCACAAGGTGCAGATCCGCAGGCACGAGCGCCAGCTGCATGGGGCAGGACGCTCCCGAGGCCTGGGACTCCTGCGGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp CTGGAGGACCGCAGGAGTCCCAGGCCTCGGGAGCGTCCTGCCCCATaGAGCTGGCGCTCGTGCCTGCGGATCTGCACCTTGTGCCGGAAG +
Preference number: 5 (lower is better)
Translates to: LEDRRSPRPRERPAP*SWRSCLRICTLCRK
Trigger: CTTCCGGCACAAGGTGCAGATCCGCAGGCACGAGCGCCAGCTGCATGGGGCAGGACGCTCCCGAGGCCTGGGACTCCTGCGGTCCTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp AGCTCCACCGGGGTCAGCTCCAGGTGCACCTCCTGTTGCTCCAGCTaGTGCTGCTGCTGCAGCTGCTCCAGCTGCTGCTGCTTCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SSTGVSSRCTSCCSS*CCCCSCSSCCCFSR
Trigger: CCTGGAGAAGCAGCAGCAGCTGGAGCAGCTGCAGCAGCAGCAGCAGCTGGAGCAACAGGAGGTGCACCTGGAGCTGACCCCGGTGGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp GCTGGAGCTGGCGCTGAACCTCCCGGAGCTGGCACCACCTCTAGTTaGAGCTCTGGCTGCACAGAGGTCAGCTCCAGTTGCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: AGAGAEPPGAGTTSS*SSGCTEVSSSCSSC
Trigger: GCAGGAGCTGCAACTGGAGCTGACCTCTGTGCAGCCAGAGCTGCAACTAGAGGTGGTGCCAGCTCCGGGAGGTTCAGCGCCAGCTCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CCA 90 bp CCCATCCTCAAGACATCGAAGCTCCAACACAAAGGTCTGGGTTGCTaGGCCCAGCTCCATCCTGGCGGTCACACCAGGGTCTCCCGGAGC +
Preference number: 5 (lower is better)
Translates to: PILKTSKLQHKGLGC*AQLHPGGHTRVSRS
Trigger: GCTCCGGGAGACCCTGGTGTGACCGCCAGGATGGAGCTGGGCCCAGCAACCCAGACCTTTGTGTTGGAGCTTCGATGTCTTGAGGATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
CDS CCA 90 bp CCTGGACCCCCATCCTCAAGACATCGAAGCTCCAACACAAAGGTCTaGGTTGCTGGGCCCAGCTCCATCCTGGCGGTCACACCAGGGTCT +
Preference number: 5 (lower is better)
Translates to: PGPPSSRHRSSNTKV*VAGPSSILAVTPGS
Trigger: AGACCCTGGTGTGACCGCCAGGATGGAGCTGGGCCCAGCAACCCAGACCTTTGTGTTGGAGCTTCGATGTCTTGAGGATGGGGGTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
CDS TCA 90 bp CTGCGGTTCCTCCTGCTCTGGCTCAATATAGTAATAGGCCCCGAATaGGGCTGCAAGCACTGGCTGCTGTGGGTGGCTGCTCCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: LRFLLLWLNIVIGPE*GCKHWLLWVAAPLL
Trigger: CAGGAGGGGAGCAGCCACCCACAGCAGCCAGTGCTTGCAGCCTCATTCGGGGCCTATTACTATATTGAGCCAGAGCAGGAGGAACCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp GGGTTAAGGCCAGGACCTAGGGTTGAGGTGTGTGTGTGGATGGCGCTAACACCTCTGCGGTTGCTGCTCTaGCAACTGCCTGTGCTCGGG +
Preference number: 5 (lower is better)
Translates to: GLRPGPRVEVCVWMALTPLRLLL*QLPVLG
Trigger: CCCGAGCACAGGCAGTTGCAAGAGCAGCAACCGCAG...AGGTGTTAGCGCCATCCACACACACACCTCAACCCTAGGTCCTGGCCTTAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp GCTAGGCAAGCAATTTACAGTAGGCTGGACTCCATCCTCTGCCCCTCCCCTTCCAGAGGTCAGCTCCAGTaGCAGCTCCTGCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: ARQAIYSRLDSILCPSPSRGQLQ*QLLLLG
Trigger: GCCCAGCAGCAGGAGCTGCAACTGGAGCTGACCTCT...GGAAGGGGAGGGGCAGAGGATGGAGTCCAGCCTACTGTAAATTGCTTGCCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp AGTCTCCTGTCTCCACCTCCCAAGTGCTGGGACTATCTGGGTCCACACACCGGGCAGCACCATGAGCTCTaGCAGCACCACGTAACCTGG +
Preference number: 5 (lower is better)
Translates to: SLLSPPPKCWDYLGPHTGQHHEL*QHHVTW
Trigger: CCAGGTTACGTGGTGCTGCAAGAGCTCATGGTGCTG...CCCGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS TCA 90 bp TGCAGCTGCTCCAGCTGCTGCTGCTTCTCCAGGTGCTGCTCTAGCTaGCGTAGCTGCTCCTGCATTTTTAGCTGCAGCTGCCGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: CSCSSCCCFSRCCSS*RSCSCIFSCSCRCS
Trigger: GGAACAGCGGCAGCTGCAGCTAAAAATGCAGGAGCAGCTACGTCAGCTAGAGCAGCACCTGGAGAAGCAGCAGCAGCTGGAGCAGCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp CCCTGTGGCTGCAGCACCAGTACCTGCTGCTGTAAGTGTTGCTGTTaGAACTGTCCCTGCTGCTGCAGCAGTTGCTGCTGTTGGAGCAGC +
Preference number: 5 (lower is better)
Translates to: PCGCSTSTCCCKCCC*NCPCCCSSCCCWSS
Trigger: GCTGCTCCAACAGCAGCAACTGCTGCAGCAGCAGGGACAGTTGCAACAGCAACACTTACAGCAGCAGGTACTGGTGCTGCAGCCACAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CCA 90 bp TTGCTGCTCTTGCAACTGCCTGTGCTCGGGCTGACGTTTCTGCTCTaGCTGCTGCTTAACTCGGTGCACTCGCAAGTCCTGCGGTTCCTC +
Preference number: 5 (lower is better)
Translates to: LLLLQLPVLGLTFLL*LLLNSVHSQVLRFL
Trigger: GAGGAACCGCAGGACTTGCGAGTGCACCGAGTTAAGCAGCAGCCAGAGCAGAAACGTCAGCCCGAGCACAGGCAGTTGCAAGAGCAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp TGCATGGGCCAGTTTTCCTGCTGTTCTTGCTGGGGCGGAGACAGCTaGTGTTGTCCATCTTGCTGCTGCTGCTGCGATTCTGGCTGGGAT +
Preference number: 5 (lower is better)
Translates to: CMGQFSCCSCWGGDS*CCPSCCCCCDSGWD
Trigger: ATCCCAGCCAGAATCGCAGCAGCAGCAGCAAGATGGACAACAGCAGCTGTCTCCGCCCCAGCAAGAACAGCAGGAAAACTGGCCCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CCA 90 bp TTTGGTTGCTGGTGCTGCATGGGCCAGTTTTCCTGCTGTTCTTGCTaGGGCGGAGACAGCTGCTGTTGTCCATCTTGCTGCTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: FGCWCCMGQFSCCSC*GGDSCCCPSCCCCC
Trigger: GCAGCAGCAGCAGCAAGATGGACAACAGCAGCTGTCTCCGCCCCAGCAAGAACAGCAGGAAAACTGGCCCATGCAGCACCAGCAACCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp TCAGTCTCCTGTCTCCACCTCCCAAGTGCTGGGACTATCTGGGTCCACACACCGCTGCTGTTGTCCATCTaGCTGCTGCTGCTGCGATTC +
Preference number: 5 (lower is better)
Translates to: SVSCLHLPSAGTIWVHTPLLLSI*LLLLRF
Trigger: GAATCGCAGCAGCAGCAGCAAGATGGACAACAGCAG...CGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp GCTACCAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTGAGACGCTGAAGCGCTaGCCGCAGTCACCGCAGACG +
Preference number: 5 (lower is better)
Translates to: ATKPVLSPIFPGKAGQSLETLKR*PQSPQT
Trigger: CGTCTGCGGTGACTGCGGCAAGCGCTTCAGCGTCTC...AAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTGGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp TACCAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCCTGCGGATCTGCACCTaGTGCCGGAAGCGCTCGCCG +
Preference number: 5 (lower is better)
Translates to: YQASSQSYFPRQSWAVSFLRICT*CRKRSP
Trigger: CGGCGAGCGCTTCCGGCACAAGGTGCAGATCCGCAG...GAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp TCAGTCTCCTGTCTCCACCTCCCAAGTGCTGGGACTATCTGGGTCCACACACCGCAGTTGTTCCTGCACTaGCTGCTGCTGTACCAGCTG +
Preference number: 5 (lower is better)
Translates to: SVSCLHLPSAGTIWVHTPQLFLH*LLLYQL
Trigger: CAGCTGGTACAGCAGCAGCAAGTGCAGGAACAACTG...CGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp AGTTGCTGCTGTAGCTGTCCCTGTGGCTGCAGCACCAGTACCTGCTaGTGTAAGTGTTGCTGTTGCAACTGTCCCTGCTGCTGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: SCCCSCPCGCSTSTC*CKCCCCNCPCCCSS
Trigger: ACTGCTGCAGCAGCAGGGACAGTTGCAACAGCAACACTTACAGCAGCAGGTACTGGTGCTGCAGCCACAGGGACAGCTACAGCAGCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp AGCTGCTGCTGCAACTGTGTCTGTTGCTGCTGCAGCAATAGTTGCTaGTGTAGCTGTCCCTGTGGCTGCAGCACCAGTACCTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: SCCCNCVCCCCSNSC*CSCPCGCSTSTCCC
Trigger: ACAGCAGCAGGTACTGGTGCTGCAGCCACAGGGACAGCTACAGCAGCAACTATTGCTGCAGCAGCAACAGACACAGTTGCAGCAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp TGCTGCTCTTGCGTTGGCTGCTGTAATGGCAGTTGTTCCTGCACTTaGTGCTGCTGTACCAGCTGCTGCAGTAGCAGCACTTGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: CCSCVGCCNGSCSCT*CCCTSCCSSSTCCC
Trigger: GCAGCAGCAAGTGCTGCTACTGCAGCAGCTGGTACAGCAGCAGCAAGTGCAGGAACAACTGCCATTACAGCAGCCAACGCAAGAGCAGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp GGGTTAAGGCCAGGACCTAGGGTTGAGGTGTGTGTGTGGATGGCGCTAACACCTCTGCTGTTGTCCATCTaGCTGCTGCTGCTGCGATTC +
Preference number: 5 (lower is better)
Translates to: GLRPGPRVEVCVWMALTPLLLSI*LLLLRF
Trigger: GAATCGCAGCAGCAGCAGCAAGATGGACAACAGCAG...AGGTGTTAGCGCCATCCACACACACACCTCAACCCTAGGTCCTGGCCTTAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp GACCTCAAGATGGGGTTAAGGCCAGGACCTAGGGTTGAGGTGTGTGTGTGGATGCGGAGACAGCTGCTGTaGTCCATCTTGCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: DLKMGLRPGPRVEVCVWMRRQLL*SILLLL
Trigger: CAGCAGCAGCAAGATGGACAACAGCAGCTGTCTCCG...CATCCACACACACACCTCAACCCTAGGTCCTGGCCTTAACCCCATCTTGAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp CCGGGTTTGTATGGTGCTGGAGATGAAAACCAGGGCTTTCTGCTAGGCAAGCAAAGAGGTCAGCTCCAGTaGCAGCTCCTGCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: PGLYGAGDENQGFLLGKQRGQLQ*QLLLLG
Trigger: GCCCAGCAGCAGGAGCTGCAACTGGAGCTGACCTCT...TTGCTTGCCTAGCAGAAAGCCCTGGTTTTCATCTCCAGCACCATACAAACCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp AGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCACCGACCTGCCCAGTGTGTGTGGCTaGGTGTCGCACCAGGTCCGT +
Preference number: 5 (lower is better)
Translates to: SSQSYFPRQSWAVSFTDLPSVCG*VSHQVR
Trigger: ACGGACCTGGTGCGACACCAAGCCACACACACTGGG...CAGGTCGGTGAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp AATAGTTGCTGCTGTAGCTGTCCCTGTGGCTGCAGCACCAGTACCTaGTGCTGTAAGTGTTGCTGTTGCAACTGTCCCTGCTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: NSCCCSCPCGCSTST*CCKCCCCNCPCCCS
Trigger: GCTGCAGCAGCAGGGACAGTTGCAACAGCAACACTTACAGCAGCAGGTACTGGTGCTGCAGCCACAGGGACAGCTACAGCAGCAACTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp GACTGTTGCTGCTCTTGCGTTGGCTGCTGTAATGGCAGTTGTTCCTaGACTTGCTGCTGCTGTACCAGCTGCTGCAGTAGCAGCACTTGC +
Preference number: 5 (lower is better)
Translates to: DCCCSCVGCCNGSCS*TCCCCTSCCSSSTC
Trigger: GCAAGTGCTGCTACTGCAGCAGCTGGTACAGCAGCAGCAAGTGCAGGAACAACTGCCATTACAGCAGCCAACGCAAGAGCAGCAACAGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp TGGAGAAGCTGTGGGTGCTGTGACTGTTGCTGCTCTTGCGTTGGCTaGTGTAATGGCAGTTGTTCCTGCACTTGCTGCTGCTGTACCAGC +
Preference number: 5 (lower is better)
Translates to: WRSCGCCDCCCSCVG*CNGSCSCTCCCCTS
Trigger: GCTGGTACAGCAGCAGCAAGTGCAGGAACAACTGCCATTACAGCAGCCAACGCAAGAGCAGCAACAGTCACAGCACCCACAGCTTCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CCA 90 bp CTCTTGTCCAAGTCTTGGCAGCTGCACCACCTGCAGCTGTGGTTTTaGTTGCTGGTGCTGCATGGGCCAGTTTTCCTGCTGTTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LLSKSWQLHHLQLWF*LLVLHGPVFLLFLL
Trigger: CAGCAAGAACAGCAGGAAAACTGGCCCATGCAGCACCAGCAACCAAAACCACAGCTGCAGGTGGTGCAGCTGCCAAGACTTGGACAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp GTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCTCGCTCTTGTCCAAGTCTaGGCAGCTGCACCACCTGCA +
Preference number: 5 (lower is better)
Translates to: VTQAICQLTMCLTMTWSLALVQV*AAAPPA
Trigger: TGCAGGTGGTGCAGCTGCCAAGACTTGGACAAGAGC...GAGGCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp AGTCTCCTGTCTCCACCTCCCAAGTGCTGGGACTATCTGGGTCCACACACCGGGCTGTTCCTGCTGCTGTaGAAACATCTGTTGTGCTTG +
Preference number: 5 (lower is better)
Translates to: SLLSPPPKCWDYLGPHTGLFLLL*KHLLCL
Trigger: CAAGCACAACAGATGTTTCAACAGCAGCAGGAACAG...CCCGGTGTGTGGACCCAGATAGTCCCAGCACTTGGGAGGTGGAGACAGGAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp TCATGTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCCAGTGTGTGTGGCTaGGTGTCGCACCAGGTCCGT +
Preference number: 5 (lower is better)
Translates to: SCNPGYLPTHYVPDNDLEPSVCG*VSHQVR
Trigger: ACGGACCTGGTGCGACACCAAGCCACACACACTGGG...CTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTACATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp AGCTCAAGTTCCACTTCCTCGTCCTCTGGTGGAAGAGGCTGCAGCTaGTGGTGCTGCTGTAGCTGTTCCTGCTGCTTTTGCAATAACTGC +
Preference number: 5 (lower is better)
Translates to: SSSSTSSSSGGRGCS*WCCCSCSCCFCNNC
Trigger: GCAGTTATTGCAAAAGCAGCAGGAACAGCTACAGCAGCACCAGCAGCTGCAGCCTCTTCCACCAGAGGACGAGGAAGTGGAACTTGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CCA 90 bp ATGTTGCTCTTGTCCAAGTCTTGGCAGCTGCACCACCTGCAGCTGTaGTTTTGGTTGCTGGTGCTGCATGGGCCAGTTTTCCTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: MLLLSKSWQLHHLQL*FWLLVLHGPVFLLF
Trigger: GAACAGCAGGAAAACTGGCCCATGCAGCACCAGCAACCAAAACCACAGCTGCAGGTGGTGCAGCTGCCAAGACTTGGACAAGAGCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CCA 90 bp TCAAGTTCCACTTCCTCGTCCTCTGGTGGAAGAGGCTGCAGCTGCTaGTGCTGCTGTAGCTGTTCCTGCTGCTTTTGCAATAACTGCTGC +
Preference number: 5 (lower is better)
Translates to: SSSTSSSSGGRGCSC*CCCSCSCCFCNNCC
Trigger: GCAGCAGTTATTGCAAAAGCAGCAGGAACAGCTACAGCAGCACCAGCAGCTGCAGCCTCTTCCACCAGAGGACGAGGAAGTGGAACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp TACCAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCACACAAAGGTCTGGGTaGCTGGGCCCAGCTCCATCC +
Preference number: 5 (lower is better)
Translates to: YQASSQSYFPRQSWAVSFTQRSG*LGPAPS
Trigger: GGATGGAGCTGGGCCCAGCAACCCAGACCTTTGTGT...GAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000212355.2
CDS-3UTR CAA 90 bp AGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCACCGACCTGCCTGCAGCTGTGGTTTaGGTTGCTGGTGCTGCATGG +
Preference number: 5 (lower is better)
Translates to: SSQSYFPRQSWAVSFTDLPAAVV*VAGAAW
Trigger: CCATGCAGCACCAGCAACCAAAACCACAGCTGCAGG...CAGGTCGGTGAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp AGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCACCGACCTGGCTCTTGTCCAAGTCTaGGCAGCTGCACCACCTGCA +
Preference number: 5 (lower is better)
Translates to: SSQSYFPRQSWAVSFTDLALVQV*AAAPPA
Trigger: TGCAGGTGGTGCAGCTGCCAAGACTTGGACAAGAGC...CAGGTCGGTGAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp TGGTGTGGAAGCTGCATCATCTGGTGCTGCTGCAGCAATAAATGTTaGTCTTGTCCAAGTCTTGGCAGCTGCACCACCTGCAGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: WCGSCIIWCCCSNKC*SCPSLGSCTTCSCG
Trigger: ACCACAGCTGCAGGTGGTGCAGCTGCCAAGACTTGGACAAGAGCAACATTTATTGCTGCAGCAGCACCAGATGATGCAGCTTCCACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp TGTTGCTGCTGCAGCAATAGTTGCTGCTGTAGCTGTCCCTGTGGCTaGAGCACCAGTACCTGCTGCTGTAAGTGTTGCTGTTGCAACTGT +
Preference number: 5 (lower is better)
Translates to: CCCCSNSCCCSCPCG*STSTCCCKCCCCNC
Trigger: ACAGTTGCAACAGCAACACTTACAGCAGCAGGTACTGGTGCTGCAGCCACAGGGACAGCTACAGCAGCAACTATTGCTGCAGCAGCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp TGCACTTGCTGCTGCTGTACCAGCTGCTGCAGTAGCAGCACTTGCTaGTGCGGTACAGGTTCATATACTTGCTGCTGCACAAGATACTGC +
Preference number: 5 (lower is better)
Translates to: CTCCCCTSCCSSSTC*CGTGSYTCCCTRYC
Trigger: GCAGTATCTTGTGCAGCAGCAAGTATATGAACCTGTACCGCAGCAGCAAGTGCTGCTACTGCAGCAGCTGGTACAGCAGCAGCAAGTGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp TCCTGCACTTGCTGCTGCTGTACCAGCTGCTGCAGTAGCAGCACTTaGTGCTGCGGTACAGGTTCATATACTTGCTGCTGCACAAGATAC +
Preference number: 5 (lower is better)
Translates to: SCTCCCCTSCCSSST*CCGTGSYTCCCTRY
Trigger: GTATCTTGTGCAGCAGCAAGTATATGAACCTGTACCGCAGCAGCAAGTGCTGCTACTGCAGCAGCTGGTACAGCAGCAGCAAGTGCAGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp GACCTCAAGATGGGGTTAAGGCCAGGACCTAGGGTTGAGGTGTGTGTGTGGATGTTGAATTTGCTGCAGTaGCAGCTGTTCCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: DLKMGLRPGPRVEVCVWMLNLLQ*QLFLLL
Trigger: CAGCAGCAGGAACAGCTGCAACTGCAGCAAATTCAA...CATCCACACACACACCTCAACCCTAGGTCCTGGCCTTAACCCCATCTTGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp ACTTGCTGCTGCTGTACCAGCTGCTGCAGTAGCAGCACTTGCTGCTaGGGTACAGGTTCATATACTTGCTGCTGCACAAGATACTGCTGT +
Preference number: 5 (lower is better)
Translates to: TCCCCTSCCSSSTCC*GTGSYTCCCTRYCC
Trigger: ACAGCAGTATCTTGTGCAGCAGCAAGTATATGAACCTGTACCGCAGCAGCAAGTGCTGCTACTGCAGCAGCTGGTACAGCAGCAGCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp TGCTGTAATGGCAGTTGTTCCTGCACTTGCTGCTGCTGTACCAGCTaGTGCAGTAGCAGCACTTGCTGCTGCGGTACAGGTTCATATACT +
Preference number: 5 (lower is better)
Translates to: CCNGSCSCTCCCCTS*CSSSTCCCGTGSYT
Trigger: AGTATATGAACCTGTACCGCAGCAGCAAGTGCTGCTACTGCAGCAGCTGGTACAGCAGCAGCAAGTGCAGGAACAACTGCCATTACAGCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CCA 90 bp ACATGCTGCAGCAGCAACTGTCTCTGCTGTTGTAACAGTTGCTTTTaGAGAAGCTGTGGGTGCTGTGACTGTTGCTGCTCTTGCGTTGGC +
Preference number: 5 (lower is better)
Translates to: TCCSSNCLCCCNSCF*RSCGCCDCCCSCVG
Trigger: GCCAACGCAAGAGCAGCAACAGTCACAGCACCCACAGCTTCTCCAAAAGCAACTGTTACAACAGCAGAGACAGTTGCTGCTGCAGCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp CCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACACCCTGCAGCTGTGGTTTaGGTTGCTGGTGCTGCATGG +
Preference number: 5 (lower is better)
Translates to: PFLFQFTHTHTHTHTHTHPAAVV*VAGAAW
Trigger: CCATGCAGCACCAGCAACCAAAACCACAGCTGCAGG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp AATAGTTGGTGCTGCAATTGTGCCTGTTGCTGCAGCAACAGCTGCTaGTGCAACTGTGTCTGTTGCTGCTGCAGCAATAGTTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: NSWCCNCACCCSNSC*CNCVCCCCSNSCCC
Trigger: ACAGCAGCAACTATTGCTGCAGCAGCAACAGACACAGTTGCAGCAGCAGCTGTTGCTGCAGCAACAGGCACAATTGCAGCACCAACTATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp AGTAATAGTTGGTGCTGCAATTGTGCCTGTTGCTGCAGCAACAGCTaGTGCTGCAACTGTGTCTGTTGCTGCTGCAGCAATAGTTGCTGC +
Preference number: 5 (lower is better)
Translates to: SNSWCCNCACCCSNS*CCNCVCCCCSNSCC
Trigger: GCAGCAACTATTGCTGCAGCAGCAACAGACACAGTTGCAGCAGCAGCTGTTGCTGCAGCAACAGGCACAATTGCAGCACCAACTATTACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp TCCTGCTGCTGTTGCAATAACTGCTGCTGCAACTGTTCCTGCTGCTaGAGTAATAGTTGGTGCTGCAATTGTGCCTGTTGCTGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: SCCCCNNCCCNCSCC*SNSWCCNCACCCSN
Trigger: GTTGCTGCAGCAACAGGCACAATTGCAGCACCAACTATTACTGCAGCAGCAGGAACAGTTGCAGCAGCAGTTATTGCAACAGCAGCAGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp TGTAACAGTTGCTTTTGGAGAAGCTGTGGGTGCTGTGACTGTTGCTaGTCTTGCGTTGGCTGCTGTAATGGCAGTTGTTCCTGCACTTGC +
Preference number: 5 (lower is better)
Translates to: CNSCFWRSCGCCDCC*SCVGCCNGSCSCTC
Trigger: GCAAGTGCAGGAACAACTGCCATTACAGCAGCCAACGCAAGAGCAGCAACAGTCACAGCACCCACAGCTTCTCCAAAAGCAACTGTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 90 bp TGTTGTAACAGTTGCTTTTGGAGAAGCTGTGGGTGCTGTGACTGTTaGTGCTCTTGCGTTGGCTGCTGTAATGGCAGTTGTTCCTGCACT +
Preference number: 5 (lower is better)
Translates to: CCNSCFWRSCGCCDC*CSCVGCCNGSCSCT
Trigger: AGTGCAGGAACAACTGCCATTACAGCAGCCAACGCAAGAGCAGCAACAGTCACAGCACCCACAGCTTCTCCAAAAGCAACTGTTACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp TACCAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCTTGAATTTGCTGCAGTaGCAGCTGTTCCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: YQASSQSYFPRQSWAVSFLNLLQ*QLFLLL
Trigger: CAGCAGCAGGAACAGCTGCAACTGCAGCAAATTCAA...GAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp ATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACACACCAGTTGTTCCTGCACTaGCTGCTGCTGTACCAGCTG +
Preference number: 5 (lower is better)
Translates to: IHSFSSSHTHTHTHTHTHQLFLH*LLLYQL
Trigger: CAGCTGGTACAGCAGCAGCAAGTGCAGGAACAACTG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp TACCAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCCTGTTCCTGCTGCTGTaGAAACATCTGTTGTGCTTG +
Preference number: 5 (lower is better)
Translates to: YQASSQSYFPRQSWAVSFLFLLL*KHLLCL
Trigger: CAAGCACAACAGATGTTTCAACAGCAGCAGGAACAG...GAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp CATGTAACCCAGGCTATCTGCCAACTCACTATGTGCCTGACAATGACCTGGAGCCACAAGATACTGCTGTaGAATTTGCTGCAGTTGCAG +
Preference number: 5 (lower is better)
Translates to: HVTQAICQLTMCLTMTWSHKILL*NLLQLQ
Trigger: CTGCAACTGCAGCAAATTCAACAGCAGTATCTTGTG...GCTCCAGGTCATTGTCAGGCACATAGTGAGTTGGCAGATAGCCTGGGTTACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp CACACTAAATATTTCATTTGCTGGTTAGTGTTTGGTTGTATCAAATCTCACGAGCTGCGGATCTGCACCTaGTGCCGGAAGCGCTCGCCG +
Preference number: 5 (lower is better)
Translates to: HTKYFICWLVFGCIKSHELRICT*CRKRSP
Trigger: CGGCGAGCGCTTCCGGCACAAGGTGCAGATCCGCAG...CTCGTGAGATTTGATACAACCAAACACTAACCAGCAAATGAAATATTTAGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp CTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCACCGACCTGGAGATACAGGTTCATATACTaGCTGCTGCACAAGATACTG +
Preference number: 5 (lower is better)
Translates to: LSPIFPGKAGQSLSPTWRYRFIY*LLHKIL
Trigger: CAGTATCTTGTGCAGCAGCAAGTATATGAACCTGTA...TCTCCAGGTCGGTGAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp TACCAAGCCAGTTCTCAGTCCTATTTTCCCAGGCAAAGCTGGGCAGTCTCTTTCATACTGCTGTTGAATTaGCTGCAGTTGCAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: YQASSQSYFPRQSWAVSFILLLN*LQLQLF
Trigger: GAACAGCTGCAACTGCAGCAAATTCAACAGCAGTAT...GAAAGAGACTGCCCAGCTTTGCCTGGGAAAATAGGACTGAGAACTGGCTTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp GATGGAAGTCTTCCTTTCTTAAGGATAATTCAAGATACCCAGAAAGACCTCAAGCAGCACCATGAGCTCTaGCAGCACCACGTAACCTGG +
Preference number: 5 (lower is better)
Translates to: DGSLPFLRIIQDTQKDLKQHHEL*QHHVTW
Trigger: CCAGGTTACGTGGTGCTGCAAGAGCTCATGGTGCTG...CTTGAGGTCTTTCTGGGTATCTTGAATTATCCTTAAGAAAGGAAGACTTCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS TCA 90 bp TGTTGCAACAGCTTCTGCTCTTGCACTTGTTGTAACTGCAATACTTaGTCTTGCACATGCTGCAGCAGCAACTGTCTCTGCTGTTGTAAC +
Preference number: 5 (lower is better)
Translates to: CCNSFCSCTCCNCNT*SCTCCSSNCLCCCN
Trigger: GTTACAACAGCAGAGACAGTTGCTGCTGCAGCATGTGCAAGATCAAGTATTGCAGTTACAACAAGTGCAAGAGCAGAAGCTGTTGCAACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp AGAATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACCTGTTGAAACATCTGTaGTGCTTGGTGTGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: RMIHSFSSSHTHTHTHTHLLKHL*CLVWKL
Trigger: CAGCTTCCACACCAAGCACAACAGATGTTTCAACAG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp AATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACACCTGCAATACTTGATCTaGCACATGCTGCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: NDPFLFQFTHTHTHTHTHLQYLI*HMLQQQ
Trigger: TTGCTGCTGCAGCATGTGCAAGATCAAGTATTGCAG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp AGAATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACATACTGCTGTTGAATTaGCTGCAGTTGCAGCTGTTC +
Preference number: 5 (lower is better)
Translates to: RMIHSFSSSHTHTHTHTHILLLN*LQLQLF
Trigger: GAACAGCTGCAACTGCAGCAAATTCAACAGCAGTAT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp AGAATGATCCATTCCTTTTCCAGTTCACACACACACACACACACACACACACACCACAAGATACTGCTGTaGAATTTGCTGCAGTTGCAG +
Preference number: 5 (lower is better)
Translates to: RMIHSFSSSHTHTHTHTHHKILL*NLLQLQ
Trigger: CTGCAACTGCAGCAAATTCAACAGCAGTATCTTGTG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGAACTGGAAAAGGAATGGATCATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACACACACACACTAAATATTTCATTTGCTCTGTTGAAACATCTGTaGTGCTTGGTGTGGAAGCTG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHTHTLNISFALLKHL*CLVWKL
Trigger: CAGCTTCCACACCAAGCACAACAGATGTTTCAACAG...AGCAAATGAAATATTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp GATGGAAGTCTTCCTTTCTTAAGGATAATTCAAGATACCCAGAAAGACCTCAAGCTGCAATACTTGATCTaGCACATGCTGCAGCAGCAA +
Preference number: 5 (lower is better)
Translates to: DGSLPFLRIIQDTQKDLKLQYLI*HMLQQQ
Trigger: TTGCTGCTGCAGCATGTGCAAGATCAAGTATTGCAG...CTTGAGGTCTTTCTGGGTATCTTGAATTATCCTTAAGAAAGGAAGACTTCCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS-3UTR CAA 90 bp CACACACACACACACACACACACACACACACACACACTAAATATTTCATTTGCTTACAGGTTCATATACTaGCTGCTGCACAAGATACTG +
Preference number: 5 (lower is better)
Translates to: HTHTHTHTHTHTLNISFAYRFIY*LLHKIL
Trigger: CAGTATCTTGTGCAGCAGCAAGTATATGAACCTGTA...AGCAAATGAAATATTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp GGGAGCGTCCTGCCCCATGCAGCTGGCGCTCGTGCCTaGGGATCTGCACCTTGTGCCGGAAGCGCTCGCCGC +
Preference number: 6 (lower is better)
Translates to: GSVLPHAAGARA*GSAPCAGSARR
Trigger: GCGGCGAGCGCTTCCGGCACAAGGTGCAGATCCGCAGGCACGAGCGCCAGCTGCATGGGGCAGGACGCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp GGAGGACCGCAGGAGTCCCAGGCCTCGGGAGCGTCCTaGCCCATGCAGCTGGCGCTCGTGCCTGCGGATCTG +
Preference number: 6 (lower is better)
Translates to: GGPQESQASGAS*PMQLALVPADL
Trigger: CAGATCCGCAGGCACGAGCGCCAGCTGCATGGGGCAGGACGCTCCCGAGGCCTGGGACTCCTGCGGTCCTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp CCTGCCCCATGCAGCTGGCGCTCGTGCCTGCGGATCTaGACCTTGTGCCGGAAGCGCTCGCCGCAGTCCTCG +
Preference number: 6 (lower is better)
Translates to: PAPCSWRSCLRI*TLCRKRSPQSS
Trigger: CGAGGACTGCGGCGAGCGCTTCCGGCACAAGGTGCAGATCCGCAGGCACGAGCGCCAGCTGCATGGGGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp CCTCGGGAGCGTCCTGCCCCATGCAGCTGGCGCTCGTaGCTGCGGATCTGCACCTTGTGCCGGAAGCGCTCG +
Preference number: 6 (lower is better)
Translates to: PRERPAPCSWRS*LRICTLCRKRS
Trigger: CGAGCGCTTCCGGCACAAGGTGCAGATCCGCAGGCACGAGCGCCAGCTGCATGGGGCAGGACGCTCCCGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp GGCTGCACAGAGGTCAGCTCCAGTTGCAGCTCCTGCTaGTGGGCGCCTAGCTCCACCGGGGTCAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: GCTEVSSSCSSC*WAPSSTGVSSR
Trigger: CCTGGAGCTGACCCCGGTGGAGCTAGGCGCCCAGCAGCAGGAGCTGCAACTGGAGCTGACCTCTGTGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CCA 72 bp GCAGCACCACGTAACCTGGAGGGGCCACCACAACGGTaGCTGGAGCTGGCGCTGAACCTCCCGGAGCTGGCA +
Preference number: 6 (lower is better)
Translates to: AAPRNLEGPPQR*LELALNLPELA
Trigger: TGCCAGCTCCGGGAGGTTCAGCGCCAGCTCCAGCCACCGTTGTGGTGGCCCCTCCAGGTTACGTGGTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CCA 72 bp TGCACAGAGGTCAGCTCCAGTTGCAGCTCCTGCTGCTaGGCGCCTAGCTCCACCGGGGTCAGCTCCAGGTGC +
Preference number: 6 (lower is better)
Translates to: CTEVSSSCSSCC*APSSTGVSSRC
Trigger: GCACCTGGAGCTGACCCCGGTGGAGCTAGGCGCCCAGCAGCAGGAGCTGCAACTGGAGCTGACCTCTGTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CCA 72 bp GGGCAGCACCATGAGCTCTTGCAGCACCACGTAACCTaGAGGGGCCACCACAACGGTGGCTGGAGCTGGCGC +
Preference number: 6 (lower is better)
Translates to: GQHHELLQHHVT*RGHHNGGWSWR
Trigger: GCGCCAGCTCCAGCCACCGTTGTGGTGGCCCCTCCAGGTTACGTGGTGCTGCAAGAGCTCATGGTGCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp TCCAGGTGCACCTCCTGTTGCTCCAGCTGCTGCTGCTaGTGCAGCTGCTCCAGCTGCTGCTGCTTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: SRCTSCCSSCCC*CSCSSCCCFSR
Trigger: CCTGGAGAAGCAGCAGCAGCTGGAGCAGCTGCAGCAGCAGCAGCAGCTGGAGCAACAGGAGGTGCACCTGGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp CCCGGAGCTGGCACCACCTCTAGTTGCAGCTCTGGCTaGACAGAGGTCAGCTCCAGTTGCAGCTCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: PGAGTTSSCSSG*TEVSSSCSSCC
Trigger: GCAGCAGGAGCTGCAACTGGAGCTGACCTCTGTGCAGCCAGAGCTGCAACTAGAGGTGGTGCCAGCTCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CAA 90 bp GACCCCCATCCTCAAGACATCGAAGCTCCAACACAAAGGTCTGGGTaGCTGGGCCCAGCTCCATCCTGGCGGTCACACCAGGGTCTCCCG +
Preference number: 6 (lower is better)
Translates to: DPHPQDIEAPTQRSG*LGPAPSWRSHQGLP
Trigger: CGGGAGACCCTGGTGTGACCGCCAGGATGGAGCTGGGCCCAGCAACCCAGACCTTTGTGTTGGAGCTTCGATGTCTTGAGGATGGGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
CDS TCA 72 bp TGCGGTTGCTGCTCTTGCAACTGCCTGTGCTCGGGCTaGCGTTTCTGCTCTGGCTGCTGCTTAACTCGGTGC +
Preference number: 6 (lower is better)
Translates to: CGCCSCNCLCSG*RFCSGCCLTRC
Trigger: GCACCGAGTTAAGCAGCAGCCAGAGCAGAAACGTCAGCCCGAGCACAGGCAGTTGCAAGAGCAGCAACCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS TCA 72 bp TGCTGCTGCTGCGATTCTGGCTGGGATCCTAACAGCTaGTGCTGCGGTTGCTGCTCTTGCAACTGCCTGTGC +
Preference number: 6 (lower is better)
Translates to: CCCCDSGWDPNS*CCGCCSCNCLC
Trigger: GCACAGGCAGTTGCAAGAGCAGCAACCGCAGCATCAGCTGTTAGGATCCCAGCCAGAATCGCAGCAGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp TGCTGGTGCTGCATGGGCCAGTTTTCCTGCTGTTCTTaGTGGGGCGGAGACAGCTGCTGTTGTCCATCTTGC +
Preference number: 6 (lower is better)
Translates to: CWCCMGQFSCCS*WGGDSCCCPSC
Trigger: GCAAGATGGACAACAGCAGCTGTCTCCGCCCCAGCAAGAACAGCAGGAAAACTGGCCCATGCAGCACCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CCA 72 bp TTGCAACTGCCTGTGCTCGGGCTGACGTTTCTGCTCTaGCTGCTGCTTAACTCGGTGCACTCGCAAGTCCTG +
Preference number: 6 (lower is better)
Translates to: LQLPVLGLTFLL*LLLNSVHSQVL
Trigger: CAGGACTTGCGAGTGCACCGAGTTAAGCAGCAGCCAGAGCAGAAACGTCAGCCCGAGCACAGGCAGTTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CCA 72 bp TGGTGCTGCATGGGCCAGTTTTCCTGCTGTTCTTGCTaGGGCGGAGACAGCTGCTGTTGTCCATCTTGCTGC +
Preference number: 6 (lower is better)
Translates to: WCCMGQFSCCSC*GGDSCCCPSCC
Trigger: GCAGCAAGATGGACAACAGCAGCTGTCTCCGCCCCAGCAAGAACAGCAGGAAAACTGGCCCATGCAGCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CCA 72 bp GGCAGCTGCACCACCTGCAGCTGTGGTTTTGGTTGCTaGTGCTGCATGGGCCAGTTTTCCTGCTGTTCTTGC +
Preference number: 6 (lower is better)
Translates to: GSCTTCSCGFGC*CCMGQFSCCSC
Trigger: GCAAGAACAGCAGGAAAACTGGCCCATGCAGCACCAGCAACCAAAACCACAGCTGCAGGTGGTGCAGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CAA 90 bp TTGTCCAAGTCTTGGCAGCTGCACCACCTGCAGCTGTGGTTTTGGTaGCTGGTGCTGCATGGGCCAGTTTTCCTGCTGTTCTTGCTGGGG +
Preference number: 6 (lower is better)
Translates to: LSKSWQLHHLQLWFW*LVLHGPVFLLFLLG
Trigger: CCCCAGCAAGAACAGCAGGAAAACTGGCCCATGCAGCACCAGCAACCAAAACCACAGCTGCAGGTGGTGCAGCTGCCAAGACTTGGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS TCA 72 bp CTCCTGCTCTGGCTCAATATAGTAATAGGCCCCGAATaGGGCTGCAAGCACTGGCTGCTGTGGGTGGCTGCT +
Preference number: 6 (lower is better)
Translates to: LLLWLNIVIGPE*GCKHWLLWVAA
Trigger: AGCAGCCACCCACAGCAGCCAGTGCTTGCAGCCTCATTCGGGGCCTATTACTATATTGAGCCAGAGCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp AGCTGCACCACCTGCAGCTGTGGTTTTGGTTGCTGGTaGTGCATGGGCCAGTTTTCCTGCTGTTCTTGCTGG +
Preference number: 6 (lower is better)
Translates to: SCTTCSCGFGCW*CMGQFSCCSCW
Trigger: CCAGCAAGAACAGCAGGAAAACTGGCCCATGCAGCACCAGCAACCAAAACCACAGCTGCAGGTGGTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp CTTGGCAGCTGCACCACCTGCAGCTGTGGTTTTGGTTaGTGGTGCTGCATGGGCCAGTTTTCCTGCTGTTCT +
Preference number: 6 (lower is better)
Translates to: LGSCTTCSCGFG*WCCMGQFSCCS
Trigger: AGAACAGCAGGAAAACTGGCCCATGCAGCACCAGCAACCAAAACCACAGCTGCAGGTGGTGCAGCTGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp TGCTGTAGCTGTCCCTGTGGCTGCAGCACCAGTACCTaGTGCTGTAAGTGTTGCTGTTGCAACTGTCCCTGC +
Preference number: 6 (lower is better)
Translates to: CCSCPCGCSTST*CCKCCCCNCPC
Trigger: GCAGGGACAGTTGCAACAGCAACACTTACAGCAGCAGGTACTGGTGCTGCAGCCACAGGGACAGCTACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CCA 72 bp AAGTCTTGGCAGCTGCACCACCTGCAGCTGTGGTTTTaGTTGCTGGTGCTGCATGGGCCAGTTTTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: KSWQLHHLQLWF*LLVLHGPVFLL
Trigger: CAGCAGGAAAACTGGCCCATGCAGCACCAGCAACCAAAACCACAGCTGCAGGTGGTGCAGCTGCCAAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CAA 72 bp TTGCTGGTGCTGCATGGGCCAGTTTTCCTGCTGTTCTaGCTGGGGCGGAGACAGCTGCTGTTGTCCATCTTG +
Preference number: 6 (lower is better)
Translates to: LLVLHGPVFLLF*LGRRQLLLSIL
Trigger: CAAGATGGACAACAGCAGCTGTCTCCGCCCCAGCAAGAACAGCAGGAAAACTGGCCCATGCAGCACCAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CAA 72 bp CAAGTCTTGGCAGCTGCACCACCTGCAGCTGTGGTTTaGGTTGCTGGTGCTGCATGGGCCAGTTTTCCTGCT +
Preference number: 6 (lower is better)
Translates to: QVLAAAPPAAVV*VAGAAWASFPA
Trigger: AGCAGGAAAACTGGCCCATGCAGCACCAGCAACCAAAACCACAGCTGCAGGTGGTGCAGCTGCCAAGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CAA 90 bp GCTCTTGTCCAAGTCTTGGCAGCTGCACCACCTGCAGCTGTGGTTTaGGTTGCTGGTGCTGCATGGGCCAGTTTTCCTGCTGTTCTTGCT +
Preference number: 6 (lower is better)
Translates to: ALVQVLAAAPPAAVV*VAGAAWASFPAVLA
Trigger: AGCAAGAACAGCAGGAAAACTGGCCCATGCAGCACCAGCAACCAAAACCACAGCTGCAGGTGGTGCAGCTGCCAAGACTTGGACAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp TGCTGCTGCTGTACCAGCTGCTGCAGTAGCAGCACTTaGTGCTGCGGTACAGGTTCATATACTTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: CCCCTSCCSSST*CCGTGSYTCCC
Trigger: GCAGCAGCAAGTATATGAACCTGTACCGCAGCAGCAAGTGCTGCTACTGCAGCAGCTGGTACAGCAGCAGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp TGCGTTGGCTGCTGTAATGGCAGTTGTTCCTGCACTTaGTGCTGCTGTACCAGCTGCTGCAGTAGCAGCACT +
Preference number: 6 (lower is better)
Translates to: CVGCCNGSCSCT*CCCTSCCSSST
Trigger: AGTGCTGCTACTGCAGCAGCTGGTACAGCAGCAGCAAGTGCAGGAACAACTGCCATTACAGCAGCCAACGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp TGCTCTTGCGTTGGCTGCTGTAATGGCAGTTGTTCCTaGACTTGCTGCTGCTGTACCAGCTGCTGCAGTAGC +
Preference number: 6 (lower is better)
Translates to: CSCVGCCNGSCS*TCCCCTSCCSS
Trigger: GCTACTGCAGCAGCTGGTACAGCAGCAGCAAGTGCAGGAACAACTGCCATTACAGCAGCCAACGCAAGAGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp TGTGGGTGCTGTGACTGTTGCTGCTCTTGCGTTGGCTaGTGTAATGGCAGTTGTTCCTGCACTTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: CGCCDCCCSCVG*CNGSCSCTCCC
Trigger: GCAGCAGCAAGTGCAGGAACAACTGCCATTACAGCAGCCAACGCAAGAGCAGCAACAGTCACAGCACCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CCA 72 bp TTGTCCAAGTCTTGGCAGCTGCACCACCTGCAGCTGTaGTTTTGGTTGCTGGTGCTGCATGGGCCAGTTTTC +
Preference number: 6 (lower is better)
Translates to: LSKSWQLHHLQL*FWLLVLHGPVF
Trigger: GAAAACTGGCCCATGCAGCACCAGCAACCAAAACCACAGCTGCAGGTGGTGCAGCTGCCAAGACTTGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp TGGTGCTGCAATTGTGCCTGTTGCTGCAGCAACAGCTaGTGCTGCAACTGTGTCTGTTGCTGCTGCAGCAAT +
Preference number: 6 (lower is better)
Translates to: WCCNCACCCSNS*CCNCVCCCCSN
Trigger: ATTGCTGCAGCAGCAACAGACACAGTTGCAGCAGCAGCTGTTGCTGCAGCAACAGGCACAATTGCAGCACCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp TGCTGCTGTACCAGCTGCTGCAGTAGCAGCACTTGCTaGTGCGGTACAGGTTCATATACTTGCTGCTGCACA +
Preference number: 6 (lower is better)
Translates to: CCCTSCCSSSTC*CGTGSYTCCCT
Trigger: TGTGCAGCAGCAAGTATATGAACCTGTACCGCAGCAGCAAGTGCTGCTACTGCAGCAGCTGGTACAGCAGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp TGGAGAAGCTGTGGGTGCTGTGACTGTTGCTGCTCTTaGGTTGGCTGCTGTAATGGCAGTTGTTCCTGCACT +
Preference number: 6 (lower is better)
Translates to: WRSCGCCDCCCS*VGCCNGSCSCT
Trigger: AGTGCAGGAACAACTGCCATTACAGCAGCCAACGCAAGAGCAGCAACAGTCACAGCACCCACAGCTTCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CAA 72 bp GAAGCTGTGGGTGCTGTGACTGTTGCTGCTCTTGCGTaGGCTGCTGTAATGGCAGTTGTTCCTGCACTTGCT +
Preference number: 6 (lower is better)
Translates to: EAVGAVTVAALA*AAVMAVVPALA
Trigger: AGCAAGTGCAGGAACAACTGCCATTACAGCAGCCAACGCAAGAGCAGCAACAGTCACAGCACCCACAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CAA 90 bp GCTTTTGGAGAAGCTGTGGGTGCTGTGACTGTTGCTGCTCTTGCGTaGGCTGCTGTAATGGCAGTTGTTCCTGCACTTGCTGCTGCTGTA +
Preference number: 6 (lower is better)
Translates to: AFGEAVGAVTVAALA*AAVMAVVPALAAAV
Trigger: TACAGCAGCAGCAAGTGCAGGAACAACTGCCATTACAGCAGCCAACGCAAGAGCAGCAACAGTCACAGCACCCACAGCTTCTCCAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp AGCTGCATCATCTGGTGCTGCTGCAGCAATAAATGTTaGTCTTGTCCAAGTCTTGGCAGCTGCACCACCTGC +
Preference number: 6 (lower is better)
Translates to: SCIIWCCCSNKC*SCPSLGSCTTC
Trigger: GCAGGTGGTGCAGCTGCCAAGACTTGGACAAGAGCAACATTTATTGCTGCAGCAGCACCAGATGATGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp TGCTGCAATTGTGCCTGTTGCTGCAGCAACAGCTGCTaGTGCAACTGTGTCTGTTGCTGCTGCAGCAATAGT +
Preference number: 6 (lower is better)
Translates to: CCNCACCCSNSC*CNCVCCCCSNS
Trigger: ACTATTGCTGCAGCAGCAACAGACACAGTTGCAGCAGCAGCTGTTGCTGCAGCAACAGGCACAATTGCAGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp TGCAACTGTTCCTGCTGCTGCAGTAATAGTTGGTGCTaGAATTGTGCCTGTTGCTGCAGCAACAGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: CNCSCCCSNSWC*NCACCCSNSCC
Trigger: GCAGCAGCTGTTGCTGCAGCAACAGGCACAATTGCAGCACCAACTATTACTGCAGCAGCAGGAACAGTTGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp TGCTGCAACTGTTCCTGCTGCTGCAGTAATAGTTGGTaGTGCAATTGTGCCTGTTGCTGCAGCAACAGCTGC +
Preference number: 6 (lower is better)
Translates to: CCNCSCCCSNSW*CNCACCCSNSC
Trigger: GCAGCTGTTGCTGCAGCAACAGGCACAATTGCAGCACCAACTATTACTGCAGCAGCAGGAACAGTTGCAGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp TGCTGTACCAGCTGCTGCAGTAGCAGCACTTGCTGCTaGGGTACAGGTTCATATACTTGCTGCTGCACAAGA +
Preference number: 6 (lower is better)
Translates to: CCTSCCSSSTCC*GTGSYTCCCTR
Trigger: TCTTGTGCAGCAGCAAGTATATGAACCTGTACCGCAGCAGCAAGTGCTGCTACTGCAGCAGCTGGTACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp TGCTTTTGGAGAAGCTGTGGGTGCTGTGACTGTTGCTaGTCTTGCGTTGGCTGCTGTAATGGCAGTTGTTCC +
Preference number: 6 (lower is better)
Translates to: CFWRSCGCCDCC*SCVGCCNGSCS
Trigger: GGAACAACTGCCATTACAGCAGCCAACGCAAGAGCAGCAACAGTCACAGCACCCACAGCTTCTCCAAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CAA 90 bp TCATCTGGTGCTGCTGCAGCAATAAATGTTGCTCTTGTCCAAGTCTaGGCAGCTGCACCACCTGCAGCTGTGGTTTTGGTTGCTGGTGCT +
Preference number: 6 (lower is better)
Translates to: SSGAAAAINVALVQV*AAAPPAAVVLVAGA
Trigger: AGCACCAGCAACCAAAACCACAGCTGCAGGTGGTGCAGCTGCCAAGACTTGGACAAGAGCAACATTTATTGCTGCAGCAGCACCAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp AGTTGCTTTTGGAGAAGCTGTGGGTGCTGTGACTGTTaGTGCTCTTGCGTTGGCTGCTGTAATGGCAGTTGT +
Preference number: 6 (lower is better)
Translates to: SCFWRSCGCCDC*CSCVGCCNGSC
Trigger: ACAACTGCCATTACAGCAGCCAACGCAAGAGCAGCAACAGTCACAGCACCCACAGCTTCTCCAAAAGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp TGCTGTTGTAACAGTTGCTTTTGGAGAAGCTGTGGGTaGTGTGACTGTTGCTGCTCTTGCGTTGGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: CCCNSCFWRSCG*CDCCCSCVGCC
Trigger: ACAGCAGCCAACGCAAGAGCAGCAACAGTCACAGCACCCACAGCTTCTCCAAAAGCAACTGTTACAACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp TGCTGCAGCAGCAACTGTCTCTGCTGTTGTAACAGTTaGTTTTGGAGAAGCTGTGGGTGCTGTGACTGTTGC +
Preference number: 6 (lower is better)
Translates to: CCSSNCLCCCNS*FWRSCGCCDCC
Trigger: GCAACAGTCACAGCACCCACAGCTTCTCCAAAAGCAACTGTTACAACAGCAGAGACAGTTGCTGCTGCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS CAA 72 bp GCTGCTGCAGCAATAAATGTTGCTCTTGTCCAAGTCTaGGCAGCTGCACCACCTGCAGCTGTGGTTTTGGTT +
Preference number: 6 (lower is better)
Translates to: AAAAINVALVQV*AAAPPAAVVLV
Trigger: AACCAAAACCACAGCTGCAGGTGGTGCAGCTGCCAAGACTTGGACAAGAGCAACATTTATTGCTGCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp TGTTGCAATAACTGCTGCTGCAACTGTTCCTGCTGCTaGAGTAATAGTTGGTGCTGCAATTGTGCCTGTTGC +
Preference number: 6 (lower is better)
Translates to: CCNNCCCNCSCC*SNSWCCNCACC
Trigger: GCAACAGGCACAATTGCAGCACCAACTATTACTGCAGCAGCAGGAACAGTTGCAGCAGCAGTTATTGCAACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp TGCTGTTGCAATAACTGCTGCTGCAACTGTTCCTGCTaGTGCAGTAATAGTTGGTGCTGCAATTGTGCCTGT +
Preference number: 6 (lower is better)
Translates to: CCCNNCCCNCSC*CSNSWCCNCAC
Trigger: ACAGGCACAATTGCAGCACCAACTATTACTGCAGCAGCAGGAACAGTTGCAGCAGCAGTTATTGCAACAGCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS TCA 72 bp GGTTCATATACTTGCTGCTGCACAAGATACTGCTGTTaGATTTGCTGCAGTTGCAGCTGTTCCTGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: GSYTCCCTRYCC*ICCSCSCSCCC
Trigger: ACAGCAGCAGGAACAGCTGCAACTGCAGCAAATTCAACAGCAGTATCTTGTGCAGCAGCAAGTATATGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS TCA 72 bp AGCTTCTGCTCTTGCACTTGTTGTAACTGCAATACTTaGTCTTGCACATGCTGCAGCAGCAACTGTCTCTGC +
Preference number: 6 (lower is better)
Translates to: SFCSCTCCNCNT*SCTCCSSNCLC
Trigger: GCAGAGACAGTTGCTGCTGCAGCATGTGCAAGATCAAGTATTGCAGTTACAACAAGTGCAAGAGCAGAAGCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp TGTTGTGCTTGGTGTGGAAGCTGCATCATCTGGTGCTaGTGCAGCAATAAATGTTGCTCTTGTCCAAGTCTT +
Preference number: 6 (lower is better)
Translates to: CCAWCGSCIIWC*CSNKCCSCPSL
Trigger: AAGACTTGGACAAGAGCAACATTTATTGCTGCAGCAGCACCAGATGATGCAGCTTCCACACCAAGCACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2
CDS GCA 72 bp ATCTGTTGTGCTTGGTGTGGAAGCTGCATCATCTGGTaGTGCTGCAGCAATAAATGTTGCTCTTGTCCAAGT +
Preference number: 6 (lower is better)
Translates to: ICCAWCGSCIIW*CCSNKCCSCPS
Trigger: ACTTGGACAAGAGCAACATTTATTGCTGCAGCAGCACCAGATGATGCAGCTTCCACACCAAGCACAACAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000180336.2
ENSMUST00000212355.2
ENSMUST00000212715.2