Pregenerated sensors for ZFP850 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096916Ensembl transcript IDs: ENSMUST00000180024.2, ENSMUST00000180502.8
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCAACAGACCTGTAGCGTGTCCTCGTTCTGCGGCAGTGGGAGGCTaGCTTGCAGAGGACCTAATGTGTCCTCTTCCTCCACGGAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: ANRPVACPRSAAVGG*LAEDLMCPLPPRSS Trigger: GGAGCTCCGTGGAGGAAGAGGACACATTAGGTCCTCTGCAAGTCAGCCTCCCACTGCCGCAGAACGAGGACACGCTACAGGTCTGTTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR GCA 90 bp | TGGCCTTGTTGGACAAAGCAAGTGACTGTGGTCTATGAGGTCCTATaGTTAAGCTCTGCCCAGGGCAAAGGAGATCCTCCTCCTGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: WPCWTKQVTVVYEVL*LSSAQGKGDPPPGC Trigger: GCAGCCAGGAGGAGGATCTCCTTTGCCCTGGGCAGAGCTTAAGCATAGGACCTCATAGACCACAGTCACTTGCTTTGTCCAACAAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR CCA 90 bp | ACTTTGGGTGGCAGTTGGTGCCGTCAACATTCCAAATGTCAAGGTTaGAAAGCCAACAGACCTGTAGCGTGTCCTCGTTCTGCGGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: TLGGSWCRQHSKCQG*KANRPVACPRSAAV Trigger: CACTGCCGCAGAACGAGGACACGCTACAGGTCTGTTGGCTTTCCAACCTTGACATTTGGAATGTTGACGGCACCAACTGCCACCCAAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR TCA 90 bp | TACAGCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTGCATaGCGCCAGGTGGTACTAGAATCTGCTGGGTGGGATTCAGTGATG | + |
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Preference number: 1 (lower is better) Translates to: YSWPSFWLSGVLLPA*RQVVLESAGWDSVM Trigger: CATCACTGAATCCCACCCAGCAGATTCTAGTACCACCTGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGCTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR TCA 90 bp | CTGCCCAGGGCAAAGGAGATCCTCCTCCTGGCTGCCTTCAGATTATaGTGTAGAAACCTCCTTTCAGTACCATATTTGTCTGGAGACTGC | + |
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Preference number: 1 (lower is better) Translates to: LPRAKEILLLAAFRL*CRNLLSVPYLSGDC Trigger: GCAGTCTCCAGACAAATATGGTACTGAAAGGAGGTTTCTACATCATAATCTGAAGGCAGCCAGGAGGAGGATCTCCTTTGCCCTGGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR CCA 90 bp | ACGTGGCAGGTGTTGTATTTACAGCTGGCCATCTTTTTGGCTTTCTaGGGTTCTTCTTCCTGCATGACGCCAGGTGGTACTAGAATCTGC | + |
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Preference number: 1 (lower is better) Translates to: TWQVLYLQLAIFLAF*GSSSCMTPGGTRIC Trigger: GCAGATTCTAGTACCACCTGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGCTGTAAATACAACACCTGCCACGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR CCA 90 bp | ACACAGGTAGCTTCATGTTCAGCCAGCTTTCTGATGGGAGCCACGTaGCAGGTGTTGTATTTACAGCTGGCCATCTTTTTGGCTTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: TQVASCSASFLMGAT*QVLYLQLAIFLAFW Trigger: CCAGAAAGCCAAAAAGATGGCCAGCTGTAAATACAACACCTGCCACGTGGCTCCCATCAGAAAGCTGGCTGAACATGAAGCTACCTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR GCA 90 bp | TATTTACAGCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTaGATGACGCCAGGTGGTACTAGAATCTGCTGGGTGGGATTCAGT | + |
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Preference number: 1 (lower is better) Translates to: YLQLAIFLAFWGSSS*MTPGGTRICWVGFS Trigger: ACTGAATCCCACCCAGCAGATTCTAGTACCACCTGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGCTGTAAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR TCA 90 bp | CCTGGTCCTAGTCTGAGTATCTTCTGGGCATTGGTCTCCTCCCCGTaGCTCTTGGGTGTCACTTTCACAAACAAGTTTTTGGAGAACAAA | + |
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Preference number: 1 (lower is better) Translates to: PGPSLSIFWALVSSP*LLGVTFTNKFLENK Trigger: TTTGTTCTCCAAAAACTTGTTTGTGAAAGTGACACCCAAGAGTCACGGGGAGGAGACCAATGCCCAGAAGATACTCAGACTAGGACCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR CCA 90 bp | TCTGAACCTAATTTCCTTTGGATAGAGGATACAATGGCCAGGGACTaGGAATGTAGCTGGGTGACAGAGCACTCCTACAATGCACAAGTC | + |
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Preference number: 1 (lower is better) Translates to: SEPNFLWIEDTMARD*ECSWVTEHSYNAQV Trigger: GACTTGTGCATTGTAGGAGTGCTCTGTCACCCAGCTACATTCCCAGTCCCTGGCCATTGTATCCTCTATCCAAAGGAAATTAGGTTCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR CCA 90 bp | TTCCTTTGGATAGAGGATACAATGGCCAGGGACTGGGAATGTAGCTaGGTGACAGAGCACTCCTACAATGCACAAGTCTCTCAGATAAAA | + |
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Preference number: 1 (lower is better) Translates to: FLWIEDTMARDWECS*VTEHSYNAQVSQIK Trigger: TTTTATCTGAGAGACTTGTGCATTGTAGGAGTGCTCTGTCACCCAGCTACATTCCCAGTCCCTGGCCATTGTATCCTCTATCCAAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR TCA 90 bp | TCTTGGGTGTCACTTTCACAAACAAGTTTTTGGAGAACAAAACTCTaGAGAACTTTGGGTGGCAGTTGGTGCCGTCAACATTCCAAATGT | + |
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Preference number: 1 (lower is better) Translates to: SWVSLSQTSFWRTKL*RTLGGSWCRQHSKC Trigger: ACATTTGGAATGTTGACGGCACCAACTGCCACCCAAAGTTCTTCAGAGTTTTGTTCTCCAAAAACTTGTTTGTGAAAGTGACACCCAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR CCA 90 bp | TTCACAAACAAGTTTTTGGAGAACAAAACTCTGAAGAACTTTGGGTaGCAGTTGGTGCCGTCAACATTCCAAATGTCAAGGTTGGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: FTNKFLENKTLKNFG*QLVPSTFQMSRLES Trigger: GCTTTCCAACCTTGACATTTGGAATGTTGACGGCACCAACTGCCACCCAAAGTTCTTCAGAGTTTTGTTCTCCAAAAACTTGTTTGTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR CCA 90 bp | GCACTACTATACAAACTCTTAAAACTTTCTGAATGTACAGTCCTGTaGTTAGAATATGCTTGGCCCATGGGAATTGGCACTATTAGGTGT | + |
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Preference number: 1 (lower is better) Translates to: ALLYKLLKLSECTVL*LEYAWPMGIGTIRC Trigger: ACACCTAATAGTGCCAATTCCCATGGGCCAAGCATATTCTAACCACAGGACTGTACATTCAGAAAGTTTTAAGAGTTTGTATAGTAGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR TCA 90 bp | TGGAGACTGCCATGTTTGCACTATGATGATAATAGACTGAATCTCTaGAACTATAAGCCAGCTCCAATTTTTCTGTTTAAGAGTTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: WRLPCLHYDDNRLNL*NYKPAPIFLFKSCL Trigger: GAGGCAACTCTTAAACAGAAAAATTGGAGCTGGCTTATAGTTTCAGAGATTCAGTCTATTATCATCATAGTGCAAACATGGCAGTCTCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR TCA 90 bp | ACTGTAATCAAGGCATGCACTACTATACAAACTCTTAAAACTTTCTaGATGTACAGTCCTGTGGTTAGAATATGCTTGGCCCATGGGAAT | + |
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Preference number: 1 (lower is better) Translates to: TVIKACTTIQTLKTF*MYSPVVRICLAHGN Trigger: ATTCCCATGGGCCAAGCATATTCTAACCACAGGACTGTACATTCAGAAAGTTTTAAGAGTTTGTATAGTAGTGCATGCCTTGATTACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR TCA 90 bp | AAGCTGGACATGAAGTCACTGTATACCTATACTACATACAACTCTTaGTTCTCCTGCCTCAAATTTCCAATTACTGTAATCAAGGCATGC | + |
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Preference number: 1 (lower is better) Translates to: KLDMKSLYTYTTYNS*FSCLKFPITVIKAC Trigger: GCATGCCTTGATTACAGTAATTGGAAATTTGAGGCAGGAGAATCAAGAGTTGTATGTAGTATAGGTATACAGTGACTTCATGTCCAGCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR TCA 90 bp | GTTGTAAAAATTTGCATCATTTCCTCAAGGAAAATTATGACTCTGTaGTATAGAGGACATTCCATCTTGGCTGATGTAGGAAAGGGCAAA | + |
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Preference number: 1 (lower is better) Translates to: VVKICIISSRKIMTL*YRGHSILADVGKGK Trigger: TTTGCCCTTTCCTACATCAGCCAAGATGGAATGTCCTCTATATCACAGAGTCATAATTTTCCTTGAGGAAATGATGCAAATTTTTACAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR TCA 90 bp | TATTTGTCTGGAGACTGCCATGTTTGCACTATGATGATAATAGACTaGATCTCTGAAACTATAAGCCAGCTCCAATTTTTCTGTTTAAGA | + |
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Preference number: 1 (lower is better) Translates to: YLSGDCHVCTMMIID*ISETISQLQFFCLR Trigger: TCTTAAACAGAAAAATTGGAGCTGGCTTATAGTTTCAGAGATTCAGTCTATTATCATCATAGTGCAAACATGGCAGTCTCCAGACAAATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR CCA 90 bp | ATAAATTATCAGAGACATTTTGACCTCCATATCCTAGAACAGAGTTaGGTAATATTCCATGAGATTCTCCATCAAGGAAATTCTAGCCAA | + |
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Preference number: 1 (lower is better) Translates to: INYQRHFDLHILEQS*VIFHEILHQGNSSQ Trigger: TTGGCTAGAATTTCCTTGATGGAGAATCTCATGGAATATTACCCAACTCTGTTCTAGGATATGGAGGTCAAAATGTCTCTGATAATTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCAGGTGGGGGAATGTAGCTGGGTaGCAGAGCACTCCTACAATG | + |
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Preference number: 2 (lower is better) Translates to: AGHLFGFLGFFFLHDARWGNVAG*QSTPTM Trigger: CATTGTAGGAGTGCTCTGTCACCCAGCTACATTCCC...CCACCTGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR CAA 90 bp | ATGGGAGCCACGTGGCAGGTGTTGTATTTACAGCTGGCCATCTTTTaGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCAGGTGGTACT | + |
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Preference number: 2 (lower is better) Translates to: MGATWQVLYLQLAIF*AFWGSSSCMTPGGT Trigger: AGTACCACCTGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGCTGTAAATACAACACCTGCCACGTGGCTCCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR-3UTR TCA 90 bp | TTACAGCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCATGGTGCCTAGTAAGCTaGGCCAGAACAGTGAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LQLAIFLAFWGSSSCMTPWCLVS*ARTVKA Trigger: GGCCTTCACTGTTCTGGCTCAGCTTACTAGGCACCA...TGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGCTGTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCAGGTGGCCTGTGGTTAGAATATaGTTGGCCCATGGGAATTGG | + |
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Preference number: 2 (lower is better) Translates to: AGHLFGFLGFFFLHDARWPVVRI*LAHGNW Trigger: CCAATTCCCATGGGCCAAGCATATTCTAACCACAGG...CCACCTGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCAGGTGGAGGAGATCCTCCTCCTaGCTGCCTTCAGATTATGAT | + |
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Preference number: 2 (lower is better) Translates to: AGHLFGFLGFFFLHDARWRRSSS*LPSDYD Trigger: ATCATAATCTGAAGGCAGCCAGGAGGAGGATCTCCT...CCACCTGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR-3UTR GCA 90 bp | TTACAGCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCAACCTTGCTCAACAGCTaGAGGGGGAGCTTTTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: LQLAIFLAFWGSSSCMTPTLLNS*RGSFCP Trigger: TGGACAAAAGCTCCCCCTGCAGCTGTTGAGCAAGGT...TGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGCTGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR CAA 90 bp | GCTTCATGTTCAGCCAGCTTTCTGATGGGAGCCACGTGGCAGGTGTaGTATTTACAGCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: ASCSASFLMGATWQV*YLQLAIFLAFWGSS Trigger: AGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGCTGTAAATACAACACCTGCCACGTGGCTCCCATCAGAAAGCTGGCTGAACATGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCAGGTGGTTGGGTAATATTCCATaGGATTCTCCATCAAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: AGHLFGFLGFFFLHDARWLGNIP*DSPSRK Trigger: TTTCCTTGATGGAGAATCTCATGGAATATTACCCAA...CCACCTGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCAGGTGGACTCTTAAAACTTTCTaGATGTACAGTCCTGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: AGHLFGFLGFFFLHDARWTLKTF*MYSPVV Trigger: AACCACAGGACTGTACATTCAGAAAGTTTTAAGAGT...CCACCTGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR-3UTR TCA 90 bp | TTACAGCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCATGTTTCACAGCAGCATaGATAACCCTATGCCAAACA | + |
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Preference number: 2 (lower is better) Translates to: LQLAIFLAFWGSSSCMTPCFTAA*ITLCQT Trigger: TGTTTGGCATAGGGTTATTCATGCTGCTGTGAAACA...TGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGCTGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR-3UTR TCA 90 bp | TTACAGCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCAGCTGCCTTCAGATTATaGTGTAGAAACCTCCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: LQLAIFLAFWGSSSCMTPAAFRL*CRNLLS Trigger: TGAAAGGAGGTTTCTACATCATAATCTGAAGGCAGC...TGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGCTGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR-3UTR TCA 90 bp | TTACAGCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCAAATAGACTGAATCTCTaGAACTATAAGCCAGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: LQLAIFLAFWGSSSCMTPNRLNL*NYKPAP Trigger: TGGAGCTGGCTTATAGTTTCAGAGATTCAGTCTATT...TGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGCTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR-3UTR CCA 90 bp | TTACAGCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCAGAACCTAATTTCCTTTaGATAGAGGATACAATGGCC | + |
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Preference number: 2 (lower is better) Translates to: LQLAIFLAFWGSSSCMTPEPNFL*IEDTMA Trigger: GGCCATTGTATCCTCTATCCAAAGGAAATTAGGTTC...TGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGCTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR-3UTR TCA 90 bp | TTACAGCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCATGCTCTGATCTTCAGTaGAATTTTCATACAAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: LQLAIFLAFWGSSSCMTPCSDLQ*NFHTKA Trigger: AGCCTTTGTATGAAAATTTCACTGAAGATCAGAGCA...TGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGCTGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR-3UTR TCA 90 bp | TTACAGCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCATTATCAGAGACATTTTaGCCTCCATATCCTAGAACA | + |
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Preference number: 2 (lower is better) Translates to: LQLAIFLAFWGSSSCMTPLSETF*PPYPRT Trigger: TGTTCTAGGATATGGAGGTCAAAATGTCTCTGATAA...TGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGCTGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR CAA 90 bp | AACAAGTTTTTGGAGAACAAAACTCTGAAGAACTTTGGGTGGCAGTaGGTGCCGTCAACATTCCAAATGTCAAGGTTGGAAAGCCAACAG | + |
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Preference number: 2 (lower is better) Translates to: NKFLENKTLKNFGWQ*VPSTFQMSRLESQQ Trigger: CTGTTGGCTTTCCAACCTTGACATTTGGAATGTTGACGGCACCAACTGCCACCCAAAGTTCTTCAGAGTTTTGTTCTCCAAAAACTTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR-3UTR CCA 90 bp | TTACAGCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCAATCCTAGAACAGAGTTaGGTAATATTCCATGAGATT | + |
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Preference number: 2 (lower is better) Translates to: LQLAIFLAFWGSSSCMTPILEQS*VIFHEI Trigger: AATCTCATGGAATATTACCCAACTCTGTTCTAGGAT...TGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGCTGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR-3UTR CCA 90 bp | TTACAGCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCAGAACACAGGACAGTTTaGAGACCAATAACAAATTTT | + |
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Preference number: 2 (lower is better) Translates to: LQLAIFLAFWGSSSCMTPEHRTV*RPITNF Trigger: AAAATTTGTTATTGGTCTCCAAACTGTCCTGTGTTC...TGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGCTGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR-3UTR TCA 90 bp | CATAAGAGTTGCAGTAATGTTGATGAAAGCAAGAACACTGTAGAGGCCACTTTAGACTTCTTTCCAGCATaGATGTTCTGGTGCCTAGTA | + |
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Preference number: 2 (lower is better) Translates to: HKSCSNVDESKNTVEATLDFFPA*MFWCLV Trigger: TACTAGGCACCAGAACATTCATGCTGGAAAGAAGTC...TAAAGTGGCCTCTACAGTGTTCTTGCTTTCATCAACATTACTGCAACTCTTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR-3UTR TCA 90 bp | TATAGAGGACATTCCATCTTGGCTGATGTAGGAAAGGGCAAAATGCTATGTCTAGGTTTTACACTGGTATaGATTCTCCAATGTGCATGG | + |
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Preference number: 2 (lower is better) Translates to: YRGHSILADVGKGKMLCLGFTLV*ILQCAW Trigger: CCATGCACATTGGAGAATTCATACCAGTGTAAAACC...TAGACATAGCATTTTGCCCTTTCCTACATCAGCCAAGATGGAATGTCCTCTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR-3UTR TCA 90 bp | TATAGAGGACATTCCATCTTGGCTGATGTAGGAAAGGGCAAAATGCTATGTCTAACAGAGGTGAGTTCTTaGCTATTTCAAGTTTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: YRGHSILADVGKGKMLCLTEVSS*LFQVSH Trigger: ATGGGAAACTTGAAATAGTCAAGAACTCACCTCTGT...TAGACATAGCATTTTGCCCTTTCCTACATCAGCCAAGATGGAATGTCCTCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTTTAAAAGAAGCCAAGATAAGCAGGTAGCTGGACACAGGCCATTTAACATAATATCACAAGAGCAGTaGGATGTGAATGGTGACAAT | + |
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Preference number: 2 (lower is better) Translates to: KFKRSQDKQVAGHRPFNIISQEQ*DVNGDN Trigger: ATTGTCACCATTCACATCCCACTGCTCTTGTGATAT...TATGTTAAATGGCCTGTGTCCAGCTACCTGCTTATCTTGGCTTCTTTTAAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR-3UTR CCA 90 bp | TATAGAGGACATTCCATCTTGGCTGATGTAGGAAAGGGCAAAATGCTATGTCTAGTTTATCTTCAGATGTaGGCAGAGGGCAAAAATAAT | + |
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Preference number: 2 (lower is better) Translates to: YRGHSILADVGKGKMLCLVYLQM*AEGKNN Trigger: ATTATTTTTGCCCTCTGCCCACATCTGAAGATAAAC...TAGACATAGCATTTTGCCCTTTCCTACATCAGCCAAGATGGAATGTCCTCTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR CAA 90 bp | AAAGCTGGACATGAAGTCACTGTATACCTATACTACATACAACTCTaGATTCTCCTGCCTCAAATTTCCAATTACTGTAATCAAGGCATG | + |
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Preference number: 2 (lower is better) Translates to: KAGHEVTVYLYYIQL*ILLPQISNYCNQGM Trigger: CATGCCTTGATTACAGTAATTGGAAATTTGAGGCAGGAGAATCAAGAGTTGTATGTAGTATAGGTATACAGTGACTTCATGTCCAGCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR GCA 72 bp | AGCGTGTCCTCGTTCTGCGGCAGTGGGAGGCTGACTTaGAGAGGACCTAATGTGTCCTCTTCCTCCACGGAG | + |
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Preference number: 3 (lower is better) Translates to: SVSSFCGSGRLT*RGPNVSSSSTE Trigger: CTCCGTGGAGGAAGAGGACACATTAGGTCCTCTGCAAGTCAGCCTCCCACTGCCGCAGAACGAGGACACGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR GCA 72 bp | CTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTaGATGACGCCAGGTGGTACTAGAATCTGCTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: LAIFLAFWGSSS*MTPGGTRICWV Trigger: CACCCAGCAGATTCTAGTACCACCTGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| 3UTR GCA 72 bp | ATGCATTCGAGAGCCCTCTTCCTCCTGCTAGAAGTTTaGCTTCCTGGTCCTAGTCTGAGTATCTTCTGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: MHSRALFLLLEV*LPGPSLSIFWA Trigger: TGCCCAGAAGATACTCAGACTAGGACCAGGAAGGCAAACTTCTAGCAGGAGGAAGAGGGCTCTCGAATGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR CCA 72 bp | GGCAGTTGGTGCCGTCAACATTCCAAATGTCAAGGTTaGAAAGCCAACAGACCTGTAGCGTGTCCTCGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GSWCRQHSKCQG*KANRPVACPRS Trigger: AGAACGAGGACACGCTACAGGTCTGTTGGCTTTCCAACCTTGACATTTGGAATGTTGACGGCACCAACTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR CCA 72 bp | ATAGAGGATACAATGGCCAGGGACTGGGAATGTAGCTaGGTGACAGAGCACTCCTACAATGCACAAGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: IEDTMARDWECS*VTEHSYNAQVS Trigger: AGAGACTTGTGCATTGTAGGAGTGCTCTGTCACCCAGCTACATTCCCAGTCCCTGGCCATTGTATCCTCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR CCA 72 bp | GCTTCATGTTCAGCCAGCTTTCTGATGGGAGCCACGTaGCAGGTGTTGTATTTACAGCTGGCCATCTTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: ASCSASFLMGAT*QVLYLQLAIFL Trigger: CAAAAAGATGGCCAGCTGTAAATACAACACCTGCCACGTGGCTCCCATCAGAAAGCTGGCTGAACATGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR-3UTR CAA 90 bp | TTACAGCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCAAGAGTGAAAACAAGCTaGAAGGACTTCCCACATTCC | + |
|
Preference number: 3 (lower is better) Translates to: LQLAIFLAFWGSSSCMTPRVKTS*KDFPHS Trigger: GGAATGTGGGAAGTCCTTCAAGCTTGTTTTCACTCT...TGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGCTGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR-3UTR CAA 90 bp | TTACAGCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCACTTTCAGTACCATATTaGTCTGGAGACTGCCATGTT | + |
|
Preference number: 3 (lower is better) Translates to: LQLAIFLAFWGSSSCMTPLSVPY*SGDCHV Trigger: AACATGGCAGTCTCCAGACAAATATGGTACTGAAAG...TGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGCTGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR TCA 72 bp | ATTTCTATGGATTCTGGCTCCATTGGGGAGTTGACTTaGAACCAAGTGTCCTGCTGCCCAAAGTGTAAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: ISMDSGSIGELT*NQVSCCPKCKW Trigger: CCACTTACACTTTGGGCAGCAGGACACTTGGTTTCAAGTCAACTCCCCAATGGAGCCAGAATCCATAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR CCA 72 bp | AATTTCCTTTGGATAGAGGATACAATGGCCAGGGACTaGGAATGTAGCTGGGTGACAGAGCACTCCTACAAT | + |
|
Preference number: 3 (lower is better) Translates to: NFLWIEDTMARD*ECSWVTEHSYN Trigger: ATTGTAGGAGTGCTCTGTCACCCAGCTACATTCCCAGTCCCTGGCCATTGTATCCTCTATCCAAAGGAAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR-3UTR CAA 90 bp | TTACAGCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCAAGAGTTGCAGTAATGTaGATGAAAGCAAGAACACTG | + |
|
Preference number: 3 (lower is better) Translates to: LQLAIFLAFWGSSSCMTPRVAVM*MKARTL Trigger: CAGTGTTCTTGCTTTCATCAACATTACTGCAACTCT...TGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGCTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR TCA 72 bp | GACAAATTTCTATGGATTCTGGCTCCATTGGGGAGTTaGCTTGAAACCAAGTGTCCTGCTGCCCAAAGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: DKFLWILAPLGS*LETKCPAAQSV Trigger: TACACTTTGGGCAGCAGGACACTTGGTTTCAAGTCAACTCCCCAATGGAGCCAGAATCCATAGAAATTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR TCA 72 bp | GCAAAGGAGATCCTCCTCCTGGCTGCCTTCAGATTATaGTGTAGAAACCTCCTTTCAGTACCATATTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: AKEILLLAAFRL*CRNLLSVPYLS Trigger: AGACAAATATGGTACTGAAAGGAGGTTTCTACATCATAATCTGAAGGCAGCCAGGAGGAGGATCTCCTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR TCA 72 bp | CATGAGATTCTCCATCAAGGAAATTCTAGCCAAACCTaGAATGACCTCAGCAAGACTAAGAGATGGAGGATC | + |
|
Preference number: 3 (lower is better) Translates to: HEILHQGNSSQT*NDLSKTKRWRI Trigger: GATCCTCCATCTCTTAGTCTTGCTGAGGTCATTTCAGGTTTGGCTAGAATTTCCTTGATGGAGAATCTCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR TCA 72 bp | GTTATGAGAACACCACTCAGACAGTATATGGCCAACTaGAAAATAACTCCAGCCAGCTCTGAGTACATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VMRTPLRQYMAN*KITPASSEYIQ Trigger: CTGAATGTACTCAGAGCTGGCTGGAGTTATTTTTCAGTTGGCCATATACTGTCTGAGTGGTGTTCTCATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR CCA 72 bp | AAGTTTTTGGAGAACAAAACTCTGAAGAACTTTGGGTaGCAGTTGGTGCCGTCAACATTCCAAATGTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: KFLENKTLKNFG*QLVPSTFQMSR Trigger: CCTTGACATTTGGAATGTTGACGGCACCAACTGCCACCCAAAGTTCTTCAGAGTTTTGTTCTCCAAAAACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR TCA 72 bp | GTATATGGCCAACTGAAAAATAACTCCAGCCAGCTCTaGGTACATTCAGTTATTTGGGACCCAAGTATACCT | + |
|
Preference number: 3 (lower is better) Translates to: VYGQLKNNSSQL*VHSVIWDPSIP Trigger: AGGTATACTTGGGTCCCAAATAACTGAATGTACTCAGAGCTGGCTGGAGTTATTTTTCAGTTGGCCATATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR TCA 72 bp | TCACTTTCACAAACAAGTTTTTGGAGAACAAAACTCTaGAGAACTTTGGGTGGCAGTTGGTGCCGTCAACAT | + |
|
Preference number: 3 (lower is better) Translates to: SLSQTSFWRTKL*RTLGGSWCRQH Trigger: ATGTTGACGGCACCAACTGCCACCCAAAGTTCTTCAGAGTTTTGTTCTCCAAAAACTTGTTTGTGAAAGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR CCA 72 bp | AAACAAGTTTTTGGAGAACAAAACTCTGAAGAACTTTaGGTGGCAGTTGGTGCCGTCAACATTCCAAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: KQVFGEQNSEEL*VAVGAVNIPNV Trigger: GACATTTGGAATGTTGACGGCACCAACTGCCACCCAAAGTTCTTCAGAGTTTTGTTCTCCAAAAACTTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR TCA 72 bp | AAGAGTTGCCTCAGTCATGGCATTTCTTCACAGCAATaGAACCCTAAGACAAACCCCAAATACCCTATATAT | + |
|
Preference number: 3 (lower is better) Translates to: KSCLSHGISSQQ*NPKTNPKYPIY Trigger: ATATATAGGGTATTTGGGGTTTGTCTTAGGGTTTCATTGCTGTGAAGAAATGCCATGACTGAGGCAACTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTTAAAAGAAGCCAAGATAAGCAGGTAGCTGGACACAGGCCATTTAACATATCTATTATAACTCTGTaGTTACAGCTTTGGCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: KFKRSQDKQVAGHRPFNISIITL*LQLWLV Trigger: CACCAGCCAAAGCTGTAACAACAGAGTTATAATAGA...TATGTTAAATGGCCTGTGTCCAGCTACCTGCTTATCTTGGCTTCTTTTAAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR TCA 72 bp | GGAGACTGCCATGTTTGCACTATGATGATAATAGACTaGATCTCTGAAACTATAAGCCAGCTCCAATTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: GDCHVCTMMIID*ISETISQLQFF Trigger: GAAAAATTGGAGCTGGCTTATAGTTTCAGAGATTCAGTCTATTATCATCATAGTGCAAACATGGCAGTCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR TCA 72 bp | AAGGCATGCACTACTATACAAACTCTTAAAACTTTCTaGATGTACAGTCCTGTGGTTAGAATATGCTTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: KACTTIQTLKTF*MYSPVVRICLA Trigger: GGCCAAGCATATTCTAACCACAGGACTGTACATTCAGAAAGTTTTAAGAGTTTGTATAGTAGTGCATGCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR CCA 72 bp | CAGAGACATTTTGACCTCCATATCCTAGAACAGAGTTaGGTAATATTCCATGAGATTCTCCATCAAGGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: QRHFDLHILEQS*VIFHEILHQGN Trigger: ATTTCCTTGATGGAGAATCTCATGGAATATTACCCAACTCTGTTCTAGGATATGGAGGTCAAAATGTCTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTTAAAAGAAGCCAAGATAAGCAGGTAGCTGGACACAGGCCATTTAACATAGGTAGCTTAGAATTATaGCTAAAGGCCTTTTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: KFKRSQDKQVAGHRPFNIGSLEL*LKAFSH Trigger: ATGTGAAAAGGCCTTTAGCAATAATTCTAAGCTACC...TATGTTAAATGGCCTGTGTCCAGCTACCTGCTTATCTTGGCTTCTTTTAAACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR TCA 72 bp | ATTTGCATCATTTCCTCAAGGAAAATTATGACTCTGTaGTATAGAGGACATTCCATCTTGGCTGATGTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ICIISSRKIMTL*YRGHSILADVG Trigger: TCCTACATCAGCCAAGATGGAATGTCCTCTATATCACAGAGTCATAATTTTCCTTGAGGAAATGATGCAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR TCA 72 bp | TACACTGGTATGAATTCTCCAATGTGCATGGGAGGATaGACTAATTCTAAATGTTTTCCCATACTTCTTATA | + |
|
Preference number: 3 (lower is better) Translates to: YTGMNSPMCMGG*TNSKCFPILLI Trigger: TATAAGAAGTATGGGAAAACATTTAGAATTAGTTCATCCTCCCATGCACATTGGAGAATTCATACCAGTGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR TCA 72 bp | ATGAAGTCACTGTATACCTATACTACATACAACTCTTaGTTCTCCTGCCTCAAATTTCCAATTACTGTAATC | + |
|
Preference number: 3 (lower is better) Translates to: MKSLYTYTTYNS*FSCLKFPITVI Trigger: GATTACAGTAATTGGAAATTTGAGGCAGGAGAATCAAGAGTTGTATGTAGTATAGGTATACAGTGACTTCAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR TCA 72 bp | TTTAAGAAAGGGTCTCTAGTAAACAAAAGCTGGACATaGAGTCACTGTATACCTATACTACATACAACTCTT | + |
|
Preference number: 3 (lower is better) Translates to: FKKGSLVNKSWT*SHCIPILHTTL Trigger: AAGAGTTGTATGTAGTATAGGTATACAGTGACTTCATGTCCAGCTTTTGTTTACTAGAGACCCTTTCTTAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCAGGTGGAACCCTGTAGTCCCGTaGATGTACTATAGCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGHLFGFLGFFFLHDARWNPVVP*MYYSCG Trigger: GCCACAGCTATAGTACATTCACGGGACTACAGGGTT...CCACCTGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR CAA 72 bp | TGGCAGTTGGTGCCGTCAACATTCCAAATGTCAAGGTaGGAAAGCCAACAGACCTGTAGCGTGTCCTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: WQLVPSTFQMSR*ESQQTCSVSSF Trigger: GAACGAGGACACGCTACAGGTCTGTTGGCTTTCCAACCTTGACATTTGGAATGTTGACGGCACCAACTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| CDS-3UTR GCA 90 bp | TTACAGCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCAGCAACTTCCCACCACTaGAATGAGGTTGCTGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQLAIFLAFWGSSSCMTPATSHH*NEVAVG Trigger: ACCTACAGCAACCTCATTGCAGTGGTGGGAAGTTGC...TGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGCTGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR CAA 72 bp | ACGTGGCAGGTGTTGTATTTACAGCTGGCCATCTTTTaGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TWQVLYLQLAIF*AFWGSSSCMTP Trigger: TGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGCTGTAAATACAACACCTGCCACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGCCATCTTTTTGGCTTTCTGGGGTTCTTCTTCCTGCATGACGCCAGGTGGACAAGGCTGGAGCCATaGTTGAAAAATTTACCACAT | + |
|
Preference number: 4 (lower is better) Translates to: AGHLFGFLGFFFLHDARWTRLEP*LKNLPH Trigger: ATGTGGTAAATTTTTCAAGCATGGCTCCAGCCTTGT...CCACCTGGCGTCATGCAGGAAGAAGAACCCCAGAAAGCCAAAAAGATGGCCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR CAA 72 bp | TACACCTCGCAAGGAAAAGCCTCTTCCTGTGAAAGATaGTGCTGTCTTCTGCTAAGCTTTGGCTCTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YTSQGKASSCER*CCLLLSFGSWV Trigger: GACCCAAGAGCCAAAGCTTAGCAGAAGACAGCACAATCTTTCACAGGAAGAGGCTTTTCCTTGCGAGGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| CDS-3UTR TCA 90 bp | TACATTCAGTTATTTGGGACCCAAGTATACCTCCAAGCATTTAGAGCAAAACCCTTCCCACCACTGCAATaGGGTTGCTGTAGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YIQLFGTQVYLQAFRAKPFPPLQ*GCCRSP Trigger: TGGAGACCTACAGCAACCTCATTGCAGTGGTGGGAA...GGGTTTTGCTCTAAATGCTTGGAGGTATACTTGGGTCCCAAATAACTGAATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| CDS-3UTR TCA 90 bp | TATAGAGGACATTCCATCTTGGCTGATGTAGGAAAGGGCAAAATGCTATGTCTAGTAGGGACTGAAGTCTaGAGTCTGACCCACACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YRGHSILADVGKGKMLCLVGTEV*SLTHTA Trigger: AGCTGTGTGGGTCAGACTTCAGACTTCAGTCCCTAC...TAGACATAGCATTTTGCCCTTTCCTACATCAGCCAAGATGGAATGTCCTCTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| CDS-3UTR TCA 90 bp | TACATTCAGTTATTTGGGACCCAAGTATACCTCCAAGCATTTAGAGCAAAACCCGCTGTGCTAGAACAGTaGAGGCACTGCCACATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YIQLFGTQVYLQAFRAKPAVLEQ*RHCHIL Trigger: AAGAATGTGGCAGTGCCTTCACTGTTCTAGCACAGC...GGGTTTTGCTCTAAATGCTTGGAGGTATACTTGGGTCCCAAATAACTGAATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCTTCTACTAATATGAACTCTAGAGCCCAACCAGCTTCATTTTTGACTAAAGTAGGGACTGAAGTCTaGAGGCTGACCCACACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KASTNMNSRAQPASFLTKVGTEV*RLTHTA Trigger: AGCTGTGTGGGTCAGCCTTCAGACTTCAGTCCCTAC...TTTAGTCAAAAATGAAGCTGGTTGGGCTCTAGAGTTCATATTAGTAGAAGCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| CDS-3UTR TCA 90 bp | CATAAGAGTTGCAGTAATGTTGATGAAAGCAAGAACACTGTAGAGGCCACTTTAGATGCTGTTGTAATCTaGAGGCCTTCCCACAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: HKSCSNVDESKNTVEATLDAVVI*RPSHNP Trigger: AGGATTGTGGGAAGGCCTTCAGATTACAACAGCATC...TAAAGTGGCCTCTACAGTGTTCTTGCTTTCATCAACATTACTGCAACTCTTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTTTCAGTACCATATTTGTCTGGAGACTGCCATGTTTGCACTATGATGATACTTACGTCTGAAGACTaGCCCACACAGATTACACTT | + |
|
Preference number: 4 (lower is better) Translates to: LLSVPYLSGDCHVCTMMILTSED*PTQITL Trigger: AAGTGTAATCTGTGTGGGTCAGTCTTCAGACGTAAG...TATCATCATAGTGCAAACATGGCAGTCTCCAGACAAATATGGTACTGAAAGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| CDS-3UTR GCA 90 bp | ATGAACTCTAGAGCCCAACCAGCTTCATTTTTGACTAAAGGCCTTTATACATTCGATCTGGCTTGGAAATaGAACTTCCCACCACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: MNSRAQPASFLTKGLYTFDLAWK*NFPPLQ Trigger: TTGCAGTGGTGGGAAGTTGCATTTCCAAGCCAGATC...GAATGTATAAAGGCCTTTAGTCAAAAATGAAGCTGGTTGGGCTCTAGAGTTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| CDS-3UTR TCA 90 bp | TATAGAGGACATTCCATCTTGGCTGATGTAGGAAAGGGCAAAATGCTATGTCTAGGCTGGAGCCATGCTTaGAAAATTTACCACATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YRGHSILADVGKGKMLCLGWSHA*KIYHIH Trigger: ATGAATGTGGTAAATTTTTCAAGCATGGCTCCAGCC...TAGACATAGCATTTTGCCCTTTCCTACATCAGCCAAGATGGAATGTCCTCTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| CDS-3UTR TCA 90 bp | ATGAATAACCCTATGCCAAACAAGAGTGAAAACAAGCTTGAAGGACTTCCCACATTGAGCTTCATAATCTaGTTCCAAATCTGGGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: MNNPMPNKSENKLEGLPTLSFII*FQIWAQ Trigger: TTGAGCCCAGATTTGGAATCAGATTATGAAGCTCAA...TGTGGGAAGTCCTTCAAGCTTGTTTTCACTCTTGTTTGGCATAGGGTTATTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTTAAAAGAAGCCAAGATAAGCAGGTAGCTGGACACAGGCCATTTAACATAGCTTTCTCACTGGAATaGATACTCTGGTGTTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: KFKRSQDKQVAGHRPFNIAFSLE*ILWCWI Trigger: TATCCAACACCAGAGTATTCATTCCAGTGAGAAAGC...TATGTTAAATGGCCTGTGTCCAGCTACCTGCTTATCTTGGCTTCTTTTAAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCTTCTACTAATATGAACTCTAGAGCCCAACCAGCTTCATTTTTGACTAAATCAGAAAGGTATACCTaGAGCCTAAAAGCCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KASTNMNSRAQPASFLTKSERYT*SLKAFP Trigger: TGGGAAGGCTTTTAGGCTTCAGGTATACCTTTCTGA...TTTAGTCAAAAATGAAGCTGGTTGGGCTCTAGAGTTCATATTAGTAGAAGCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR CAA 72 bp | TGCACAGGACTCCTGATGATCATGGATTTTCTGATATaGTGTAAGCTCATCATTGACAATAAGGGCTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CTGLLMIMDFLI*CKLIIDNKGFH Trigger: GTGAAAGCCCTTATTGTCAATGATGAGCTTACACAATATCAGAAAATCCATGATCATCAGGAGTCCTGTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| CDS-3UTR TCA 90 bp | ATATTTGTCTGGAGACTGCCATGTTTGCACTATGATGATAATAGACTGAATCTCCCGCATTCCTTGCACTaGTATAGTTTCACATCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: IFVWRLPCLHYDDNRLNLPHSLH*YSFTSV Trigger: TACTGATGTGAAACTATATCAGTGCAAGGAATGCGG...GAGATTCAGTCTATTATCATCATAGTGCAAACATGGCAGTCTCCAGACAAATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| CDS-3UTR GCA 90 bp | CATAAGAGTTGCAGTAATGTTGATGAAAGCAAGAACACTGTAGAGGCCACTTTAATTTCCCGCATTCCTTaGACTGATATAGTTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: HKSCSNVDESKNTVEATLISRIP*TDIVSH Trigger: ATGTGAAACTATATCAGTGCAAGGAATGCGGGAAAT...TAAAGTGGCCTCTACAGTGTTCTTGCTTTCATCAACATTACTGCAACTCTTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| CDS-3UTR CCA 90 bp | TATAGAGGACATTCCATCTTGGCTGATGTAGGAAAGGGCAAAATGCTATGTCTAATATATGTGGTTGTCTaGAGATATTTGTTGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YRGHSILADVGKGKMLCLIYVVV*RYLLSF Trigger: GAAGCTCAACAAATATCTCCAGACAACCACATATAT...TAGACATAGCATTTTGCCCTTTCCTACATCAGCCAAGATGGAATGTCCTCTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
||
| 3UTR CAA 72 bp | CATGAAGTCACTGTATACCTATACTACATACAACTCTaGATTCTCCTGCCTCAAATTTCCAATTACTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: HEVTVYLYYIQL*ILLPQISNYCN Trigger: ATTACAGTAATTGGAAATTTGAGGCAGGAGAATCAAGAGTTGTATGTAGTATAGGTATACAGTGACTTCATG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| CDS TCA 90 bp | AGTATATATGTGGTTGTCTGGAGATATTTGTTGAGCTTCATAATCTaGTTCCAAATCTGGGCTCAACCTGTCTGTTTCTTCCTTCACAGC | + |
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Preference number: 5 (lower is better) Translates to: SIYVVVWRYLLSFII*FQIWAQPVCFFLHS Trigger: GCTGTGAAGGAAGAAACAGACAGGTTGAGCCCAGATTTGGAATCAGATTATGAAGCTCAACAAATATCTCCAGACAACCACATATATACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180024.2 ENSMUST00000180502.8 |
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| CDS-3UTR CAA 90 bp | CATAAGAGTTGCAGTAATGTTGATGAAAGCAAGAACACTGTAGAGGCCACTTTAAGGCTGGAGCCATGCTaGAAAAATTTACCACATTCA | + |
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Preference number: 5 (lower is better) Translates to: HKSCSNVDESKNTVEATLRLEPC*KNLPHS Trigger: TGAATGTGGTAAATTTTTCAAGCATGGCTCCAGCCT...TAAAGTGGCCTCTACAGTGTTCTTGCTTTCATCAACATTACTGCAACTCTTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| CDS-3UTR CAA 90 bp | TATAGAGGACATTCCATCTTGGCTGATGTAGGAAAGGGCAAAATGCTATGTCTAATGAATAATCTTATGTaGAACAAGGCTGGAGCCATG | + |
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Preference number: 5 (lower is better) Translates to: YRGHSILADVGKGKMLCLMNNLM*NKAGAM Trigger: CATGGCTCCAGCCTTGTTCAACATAAGATTATTCAT...TAGACATAGCATTTTGCCCTTTCCTACATCAGCCAAGATGGAATGTCCTCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| CDS-3UTR CAA 90 bp | AAGTTTAAAAGAAGCCAAGATAAGCAGGTAGCTGGACACAGGCCATTTAACATACTAAAACTGGAGCCCTaGAGTTCAAAAGTTTCACTT | + |
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Preference number: 5 (lower is better) Translates to: KFKRSQDKQVAGHRPFNILKLEP*SSKVSL Trigger: AAGTGAAACTTTTGAACTCAAGGGCTCCAGTTTTAG...TATGTTAAATGGCCTGTGTCCAGCTACCTGCTTATCTTGGCTTCTTTTAAACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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| CDS-3UTR CAA 90 bp | ATATTTGTCTGGAGACTGCCATGTTTGCACTATGATGATAATAGACTGAATCTCATGAATACTCTGGTGTaGGATATGGTAGGAACCATT | + |
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Preference number: 5 (lower is better) Translates to: IFVWRLPCLHYDDNRLNLMNTLV*DMVGTI Trigger: AATGGTTCCTACCATATCCAACACCAGAGTATTCAT...GAGATTCAGTCTATTATCATCATAGTGCAAACATGGCAGTCTCCAGACAAATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000180502.8 |
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