Pregenerated sensors for ZFP85 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058331Ensembl transcript IDs: ENSMUST00000091520.14, ENSMUST00000144183.3
Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTCCTGGAATTTGTCTCTTATATCTCTTAAGATCCATGTGCTCTTaGAACACAGTGTACACAGTGCTTCTCACTGTAAGAGTTCGGTTG | + |
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Preference number: 1 (lower is better) Translates to: TPGICLLYLLRSMCS*NTVYTVLLTVRVRL Trigger: CAACCGAACTCTTACAGTGAGAAGCACTGTGTACACTGTGTTGCAAGAGCACATGGATCTTAAGAGATATAAGAGACAAATTCCAGGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144183.3 |
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| 3UTR GCA 90 bp | TCTACAACTCCTGGAATTTGTCTCTTATATCTCTTAAGATCCATGTaGTCTTGCAACACAGTGTACACAGTGCTTCTCACTGTAAGAGTT | + |
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Preference number: 1 (lower is better) Translates to: STTPGICLLYLLRSM*SCNTVYTVLLTVRV Trigger: AACTCTTACAGTGAGAAGCACTGTGTACACTGTGTTGCAAGAGCACATGGATCTTAAGAGATATAAGAGACAAATTCCAGGAGTTGTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144183.3 |
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| 3UTR TCA 90 bp | AGTGCTTCTCACTGTAAGAGTTCGGTTGTCTCAGTTTTATGTACTTaGCAGTGTTCCTTCCTGAGTCATTATGCATGTATACAGTTATTA | + |
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Preference number: 1 (lower is better) Translates to: SASHCKSSVVSVLCT*QCSFLSHYACIQLL Trigger: TAATAACTGTATACATGCATAATGACTCAGGAAGGAACACTGTCAAGTACATAAAACTGAGACAACCGAACTCTTACAGTGAGAAGCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144183.3 |
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| 3UTR TCA 90 bp | CCTGAGTCATTATGCATGTATACAGTTATTATAATTCACTGGTACTaGGTGTGCATTTCCCACAATACTTGCATTTGCAGAGTTTCTGTA | + |
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Preference number: 1 (lower is better) Translates to: PESLCMYTVIIIHWY*VCISHNTCICRVSV Trigger: TACAGAAACTCTGCAAATGCAAGTATTGTGGGAAATGCACACTCAGTACCAGTGAATTATAATAACTGTATACATGCATAATGACTCAGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144183.3 |
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| 3UTR TCA 90 bp | AGAGTTCGGTTGTCTCAGTTTTATGTACTTGACAGTGTTCCTTCCTaGGTCATTATGCATGTATACAGTTATTATAATTCACTGGTACTG | + |
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Preference number: 1 (lower is better) Translates to: RVRLSQFYVLDSVPS*VIMHVYSYYNSLVL Trigger: CAGTACCAGTGAATTATAATAACTGTATACATGCATAATGACTCAGGAAGGAACACTGTCAAGTACATAAAACTGAGACAACCGAACTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144183.3 |
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| 3UTR-3UTR GCA 90 bp | TTATGGGGTTTTGATCCTAGATGGATGGCCGCTGATTCTTTCCTCTTCATGCTCCACGGATCTGAACTCTaGTCCAGAAATGTGACCAGG | + |
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Preference number: 2 (lower is better) Translates to: LWGFDPRWMAADSFLFMLHGSEL*SRNVTR Trigger: CCTGGTCACATTTCTGGAGCAGAGTTCAGATCCGTG...GAGCATGAAGAGGAAAGAATCAGCGGCCATCCATCTAGGATCAAAACCCCATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091520.14 |
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| 3UTR-3UTR TCA 90 bp | CACACTCTTTACATTTATGGGGTTTTGATCCTAGATGGATGGCCGCTGATTCTTCATGCTCCACGGATCTaGACTCTGCTCCAGAAATGT | + |
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Preference number: 2 (lower is better) Translates to: HTLYIYGVLILDGWPLILHAPRI*TLLQKC Trigger: ACATTTCTGGAGCAGAGTTCAGATCCGTGGAGCATG...AAGAATCAGCGGCCATCCATCTAGGATCAAAACCCCATAAATGTAAAGAGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091520.14 |
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| 3UTR-3UTR TCA 90 bp | AGTTTTATGTACTTGACAGTGTTCCTTCCTGAGTCATTATGCATGTATACAGTTATAATTCACTGGTACTaGGTGTGCATTTCCCACAAT | + |
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Preference number: 2 (lower is better) Translates to: SFMYLTVFLPESLCMYTVIIHWY*VCISHN Trigger: ATTGTGGGAAATGCACACTCAGTACCAGTGAATTAT...AACTGTATACATGCATAATGACTCAGGAAGGAACACTGTCAAGTACATAAAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144183.3 |
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| 3UTR CCA 72 bp | ACTCTTTACATTTATGGGGTTTTGATCCTAGATGGATaGCCGCTGATTCTTTCCTCTTCATGCTCCACGGAT | + |
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Preference number: 3 (lower is better) Translates to: TLYIYGVLILDG*PLILSSSCSTD Trigger: ATCCGTGGAGCATGAAGAGGAAAGAATCAGCGGCCATCCATCTAGGATCAAAACCCCATAAATGTAAAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091520.14 |
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| 3UTR GCA 72 bp | CCTGGAATTTGTCTCTTATATCTCTTAAGATCCATGTaGTCTTGCAACACAGTGTACACAGTGCTTCTCACT | + |
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Preference number: 3 (lower is better) Translates to: PGICLLYLLRSM*SCNTVYTVLLT Trigger: AGTGAGAAGCACTGTGTACACTGTGTTGCAAGAGCACATGGATCTTAAGAGATATAAGAGACAAATTCCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144183.3 |
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| 3UTR TCA 72 bp | CACTGTAAGAGTTCGGTTGTCTCAGTTTTATGTACTTaGCAGTGTTCCTTCCTGAGTCATTATGCATGTATA | + |
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Preference number: 3 (lower is better) Translates to: HCKSSVVSVLCT*QCSFLSHYACI Trigger: TATACATGCATAATGACTCAGGAAGGAACACTGTCAAGTACATAAAACTGAGACAACCGAACTCTTACAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144183.3 |
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| 3UTR-3UTR CAA 90 bp | CTCAGTTTTATGTACTTGACAGTGTTCCTTCCTGAGTCATTATGCATGTATACAATTAACGGTCTTCCCTaGTTCCTTTCCTTCTCATAT | + |
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Preference number: 3 (lower is better) Translates to: LSFMYLTVFLPESLCMYTINGLP*FLSFSY Trigger: ATATGAGAAGGAAAGGAACAAGGGAAGACCGTTAAT...TGTATACATGCATAATGACTCAGGAAGGAACACTGTCAAGTACATAAAACTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144183.3 |
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| 3UTR-3UTR CAA 90 bp | CTCAGTTTTATGTACTTGACAGTGTTCCTTCCTGAGTCATTATGCATGTATACACCACAATACTTGCATTaGCAGAGTTTCTGTAAAATG | + |
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Preference number: 3 (lower is better) Translates to: LSFMYLTVFLPESLCMYTPQYLH*QSFCKM Trigger: CATTTTACAGAAACTCTGCAAATGCAAGTATTGTGG...TGTATACATGCATAATGACTCAGGAAGGAACACTGTCAAGTACATAAAACTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144183.3 |
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| 3UTR-3UTR CAA 90 bp | AGTTTTATGTACTTGACAGTGTTCCTTCCTGAGTCATTATGCATGTATACAGTTCATTTCCCACAATACTaGCATTTGCAGAGTTTCTGT | + |
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Preference number: 3 (lower is better) Translates to: SFMYLTVFLPESLCMYTVHFPQY*HLQSFC Trigger: ACAGAAACTCTGCAAATGCAAGTATTGTGGGAAATG...AACTGTATACATGCATAATGACTCAGGAAGGAACACTGTCAAGTACATAAAACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144183.3 |
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| 3UTR TCA 72 bp | TTATGCATGTATACAGTTATTATAATTCACTGGTACTaGGTGTGCATTTCCCACAATACTTGCATTTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: LCMYTVIIIHWY*VCISHNTCICR Trigger: TCTGCAAATGCAAGTATTGTGGGAAATGCACACTCAGTACCAGTGAATTATAATAACTGTATACATGCATAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144183.3 |
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| CDS-3UTR TCA 90 bp | ACTCTTTACATTTATGGGGTTTTGATCCTAGATGGATGGCCGCTGATTCTTTCCCAATGGCCACATCTGTaGATGACAGAAGGTCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: TLYIYGVLILDGWPLILSQWPHL*MTEGPA Trigger: TGCGGGACCTTCTGTCATTCACAGATGTGGCCATTG...GGAAAGAATCAGCGGCCATCCATCTAGGATCAAAACCCCATAAATGTAAAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091520.14 |
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| CDS-3UTR GCA 90 bp | CACACTCTTTACATTTATGGGGTTTTGATCCTAGATGGATGGCCGCTGATTCTTCAGAGTTCCTGGATTTaGAAGTCTAGGCTGCACCCG | + |
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Preference number: 4 (lower is better) Translates to: HTLYIYGVLILDGWPLILQSSWI*KSRLHP Trigger: CGGGTGCAGCCTAGACTTGCAAATCCAGGAACTCTG...AAGAATCAGCGGCCATCCATCTAGGATCAAAACCCCATAAATGTAAAGAGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091520.14 |
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| 3UTR CAA 72 bp | ACAGTGTACACAGTGCTTCTCACTGTAAGAGTTCGGTaGTCTCAGTTTTATGTACTTGACAGTGTTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: TVYTVLLTVRVR*SQFYVLDSVPS Trigger: GGAAGGAACACTGTCAAGTACATAAAACTGAGACAACCGAACTCTTACAGTGAGAAGCACTGTGTACACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144183.3 |
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| 3UTR CAA 72 bp | AATTTGTCTCTTATATCTCTTAAGATCCATGTGCTCTaGCAACACAGTGTACACAGTGCTTCTCACTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: NLSLISLKIHVL*QHSVHSASHCK Trigger: CTTACAGTGAGAAGCACTGTGTACACTGTGTTGCAAGAGCACATGGATCTTAAGAGATATAAGAGACAAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144183.3 |
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| CDS-3UTR GCA 90 bp | AAATTCTCTACAACTCCTGGAATTTGTCTCTTATATCTCTTAAGATCCATGTGCATTTGCTGGGTTTCATaGCAGTATGGATTCGACGAT | + |
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Preference number: 4 (lower is better) Translates to: KFSTTPGICLLYLLRSMCICWVS*QYGFDD Trigger: ATCGTCGAATCCATACTGGCATGAAACCCAGCAAAT...GCACATGGATCTTAAGAGATATAAGAGACAAATTCCAGGAGTTGTAGAGAATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144183.3 |
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| CDS-3UTR CCA 90 bp | TTGGCTAAATTCTCTACAACTCCTGGAATTTGTCTCTTATATCTCTTAAGATCCATTCCTTGCATTTGCTaGGTTTCATGCCAGTATGGA | + |
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Preference number: 4 (lower is better) Translates to: LAKFSTTPGICLLYLLRSIPCIC*VSCQYG Trigger: TCCATACTGGCATGAAACCCAGCAAATGCAAGGAAT...GGATCTTAAGAGATATAAGAGACAAATTCCAGGAGTTGTAGAGAATTTAGCCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144183.3 |
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| CDS-3UTR TCA 90 bp | CTCAGTTTTATGTACTTGACAGTGTTCCTTCCTGAGTCATTATGCATGTATACAATGTTGAGCAAGGCTTaGAGTATAATGAAAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: LSFMYLTVFLPESLCMYTMLSKA*SIMKGF Trigger: AAAGCCTTTCATTATACTTCAAGCCTTGCTCAACAT...TGTATACATGCATAATGACTCAGGAAGGAACACTGTCAAGTACATAAAACTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144183.3 |
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| CDS-3UTR CAA 90 bp | TTGGCTAAATTCTCTACAACTCCTGGAATTTGTCTCTTATATCTCTTAAGATCCGCCAGTATGAATTCTTaGGTGCTGTTTAAAGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: LAKFSTTPGICLLYLLRSASMNS*VLFKAG Trigger: TCCAGCTTTAAACAGCACCAAAGAATTCATACTGGC...GGATCTTAAGAGATATAAGAGACAAATTCCAGGAGTTGTAGAGAATTTAGCCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144183.3 |
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| CDS GCA 72 bp | CATTTGCTGGGTTTCATGCCAGTATGGATTCGACGATaGTTATACAGATATGATGAACAGCTAAAGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: HLLGFMPVWIRR*LYRYDEQLKAC Trigger: GCAGGCCTTTAGCTGTTCATCATATCTGTATAAGCATCGTCGAATCCATACTGGCATGAAACCCAGCAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144183.3 |
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