RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP846 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000058192

Ensembl transcript IDs: ENSMUST00000115557.10, ENSMUST00000140668.8

Found 297 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGGTCTCTCAGCTGCTCTTGCTAGCCAGATTGCTTTGGAGATCCTaGCTTCGGAGTGTTGAAATTACACGTGGGCAGACATGCCCACGC +
Preference number: 1 (lower is better)
Translates to: RVSQLLLLARLLWRS*LRSVEITRGQTCPR
Trigger: GCGTGGGCATGTCTGCCCACGTGTAATTTCAACACTCCGAAGGCAGGATCTCCAAAGCAATCTGGCTAGCAAGAGCAGCTGAGAGACCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 90 bp ATCTGCCTGCCTCTGCCTCCTGAGTACTGGGATCAATGTTGTGTGTaGAAACCATGTCCATCTGAGTACATGAGCTCCGGGGCAGTTGGG +
Preference number: 1 (lower is better)
Translates to: ICLPLPPEYWDQCCV*KPCPSEYMSSGAVG
Trigger: CCCAACTGCCCCGGAGCTCATGTACTCAGATGGACATGGTTTGCACACACAACATTGATCCCAGTACTCAGGAGGCAGAGGCAGGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 90 bp GAGCCAGAGGGGTTAGGTATGGAGGAAGAGATTAGGTGGGGACAATaGGTCTCCCTGGGACAGGGAAATAGAACAGATGGAGGAGAGAGG +
Preference number: 1 (lower is better)
Translates to: EPEGLGMEEEIRWGQ*VSLGQGNRTDGGER
Trigger: CCTCTCTCCTCCATCTGTTCTATTTCCCTGTCCCAGGGAGACCCATTGTCCCCACCTAATCTCTTCCTCCATACCTAACCCCTCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 90 bp ACGGTGTGTGTGTTTGAATGGGCATGTGGAGGTCCCAGGGCAGCATaGAGAGTCTTTTTCACTTCCTCTCCACCGTATTCACAGAGGCGG +
Preference number: 1 (lower is better)
Translates to: TVCVFEWACGGPRAA*RVFFTSSPPYSQRR
Trigger: CCGCCTCTGTGAATACGGTGGAGAGGAAGTGAAAAAGACTCTTCATGCTGCCCTGGGACCTCCACATGCCCATTCAAACACACACACCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 90 bp TCACAGAGGCGGGTCTCTCAGCTGCTCTTGCTAGCCAGATTGCTTTaGAGATCCTGCCTTCGGAGTGTTGAAATTACACGTGGGCAGACA +
Preference number: 1 (lower is better)
Translates to: SQRRVSQLLLLARLL*RSCLRSVEITRGQT
Trigger: TGTCTGCCCACGTGTAATTTCAACACTCCGAAGGCAGGATCTCCAAAGCAATCTGGCTAGCAAGAGCAGCTGAGAGACCCGCCTCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 90 bp TGGAACTCACACTATAGACCAGGCTGGCCTCAAACTCAAGAGATCTaGCTGCCTCTGCCTCCTGAGTACTGGGATCAATGTTGTGTGTGC +
Preference number: 1 (lower is better)
Translates to: WNSHYRPGWPQTQEI*LPLPPEYWDQCCVC
Trigger: GCACACACAACATTGATCCCAGTACTCAGGAGGCAGAGGCAGGCAGATCTCTTGAGTTTGAGGCCAGCCTGGTCTATAGTGTGAGTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 90 bp TGTGTTTGTATGTGTGGGTACCCAGAGACCAGAAGAGGAAGAGTCTaGCCTCCTGGAGTGTGTGTAAAGGCAGTTGTGAGCATCCCAGTG +
Preference number: 1 (lower is better)
Translates to: CVCMCGYPETRRGRV*PPGVCVKAVVSIPV
Trigger: CACTGGGATGCTCACAACTGCCTTTACACACACTCCAGGAGGTCAGACTCTTCCTCTTCTGGTCTCTGGGTACCCACACATACAAACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 90 bp ACTATAGACCAGGCTGGCCTCAAACTCAAGAGATCTGCCTGCCTCTaGCTCCTGAGTACTGGGATCAATGTTGTGTGTGCAAACCATGTC +
Preference number: 1 (lower is better)
Translates to: TIDQAGLKLKRSACL*LLSTGINVVCANHV
Trigger: GACATGGTTTGCACACACAACATTGATCCCAGTACTCAGGAGGCAGAGGCAGGCAGATCTCTTGAGTTTGAGGCCAGCCTGGTCTATAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 90 bp ACTCACACTATAGACCAGGCTGGCCTCAAACTCAAGAGATCTGCCTaGCTCTGCCTCCTGAGTACTGGGATCAATGTTGTGTGTGCAAAC +
Preference number: 1 (lower is better)
Translates to: THTIDQAGLKLKRSA*LCLLSTGINVVCAN
Trigger: GTTTGCACACACAACATTGATCCCAGTACTCAGGAGGCAGAGGCAGGCAGATCTCTTGAGTTTGAGGCCAGCCTGGTCTATAGTGTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 90 bp GAAATAGAACAGATGGAGGAGAGAGGACAACCACAATGGGAGCATTaGCCCCTCCTGACTAGTGTTCACGATGCCGAAAGATGCCATGCA +
Preference number: 1 (lower is better)
Translates to: EIEQMEERGQPQWEH*PLLTSVHDAERCHA
Trigger: TGCATGGCATCTTTCGGCATCGTGAACACTAGTCAGGAGGGGTCAATGCTCCCATTGTGGTTGTCCTCTCTCCTCCATCTGTTCTATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 90 bp TTTATCCTTGGGACCCACATGGTGGAAGAAGGGAACAGATTCCAGTaGATGTCTCATCTCCTCTCCCACTCCCAACACACACACACAACA +
Preference number: 1 (lower is better)
Translates to: FILGTHMVEEGNRFQ*MSHLLSHSQHTHTT
Trigger: TGTTGTGTGTGTGTGTTGGGAGTGGGAGAGGAGATGAGACATGCACTGGAATCTGTTCCCTTCTTCCACCATGTGGGTCCCAAGGATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 90 bp CATTCTGTAGACCCAGCTGATCTTGAAATCAAGAGATTTACCTGCTaGTGCCTCCCCAGTGCTGGGATTAAAGGCGTATGCCATCACTGC +
Preference number: 1 (lower is better)
Translates to: HSVDPADLEIKRFTC*CLPSAGIKGVCHHC
Trigger: GCAGTGATGGCATACGCCTTTAATCCCAGCACTGGGGAGGCAGCAGCAGGTAAATCTCTTGATTTCAAGATCAGCTGGGTCTACAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 90 bp TCCCTGTTTAGTTGTTCTGAATATGAAAAGTATGGGTCAGTGAGCTaGCTCAGTGAGCTAAGGCTTGCCAAGACCTGCCTGACACCCCGA +
Preference number: 1 (lower is better)
Translates to: SLFSCSEYEKYGSVS*LSELRLAKTCLTPR
Trigger: TCGGGGTGTCAGGCAGGTCTTGGCAAGCCTTAGCTCACTGAGCCAGCTCACTGACCCATACTTTTCATATTCAGAACAACTAAACAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 90 bp TGGCCTCAAACTCAAGAGATCTGCCTGCCTCTGCCTCCTGAGTACTaGGATCAATGTTGTGTGTGCAAACCATGTCCATCTGAGTACATG +
Preference number: 1 (lower is better)
Translates to: WPQTQEICLPLPPEY*DQCCVCKPCPSEYM
Trigger: CATGTACTCAGATGGACATGGTTTGCACACACAACATTGATCCCAGTACTCAGGAGGCAGAGGCAGGCAGATCTCTTGAGTTTGAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 90 bp GTGTCTTGTTCAGCCATCGTCAGAGAAGCTCCCTCCTGCAGTAGATaGGAACAAACACAAGGACCCACAACTGTACAATATGCAGAGAGG +
Preference number: 1 (lower is better)
Translates to: VSCSAIVREAPSCSR*EQTQGPTTVQYAER
Trigger: CCTCTCTGCATATTGTACAGTTGTGGGTCCTTGTGTTTGTTCCCATCTACTGCAGGAGGGAGCTTCTCTGACGATGGCTGAACAAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 90 bp GACATGCCCACGCCTCATTTACTTGGGTTCTGGAGATTCAGACTTTaGTCCCACACTGTGGGACAAGTGCTTTATCCATTGAGCCATCTC +
Preference number: 1 (lower is better)
Translates to: DMPTPHLLGFWRFRL*SHTVGQVLYPLSHL
Trigger: GAGATGGCTCAATGGATAAAGCACTTGTCCCACAGTGTGGGACCAAAGTCTGAATCTCCAGAACCCAAGTAAATGAGGCGTGGGCATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 90 bp GTGTTGAAATTACACGTGGGCAGACATGCCCACGCCTCATTTACTTaGGTTCTGGAGATTCAGACTTTGGTCCCACACTGTGGGACAAGT +
Preference number: 1 (lower is better)
Translates to: VLKLHVGRHAHASFT*VLEIQTLVPHCGTS
Trigger: ACTTGTCCCACAGTGTGGGACCAAAGTCTGAATCTCCAGAACCCAAGTAAATGAGGCGTGGGCATGTCTGCCCACGTGTAATTTCAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 90 bp ACTCATTCTGTAGACCCAGCTGATCTTGAAATCAAGAGATTTACCTaGTGCTGCCTCCCCAGTGCTGGGATTAAAGGCGTATGCCATCAC +
Preference number: 1 (lower is better)
Translates to: THSVDPADLEIKRFT*CCLPSAGIKGVCHH
Trigger: GTGATGGCATACGCCTTTAATCCCAGCACTGGGGAGGCAGCAGCAGGTAAATCTCTTGATTTCAAGATCAGCTGGGTCTACAGAATGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 90 bp CTCACTGAAAATTTCCCCACATTGTGTGTAGTAGCAGAGTTCGTGTaGACTGTGGCTTCTGCCTGTTTGTATTCCACTGGAAGTCTGTCC +
Preference number: 1 (lower is better)
Translates to: LTENFPTLCVVAEFV*TVASACLYSTGSLS
Trigger: GGACAGACTTCCAGTGGAATACAAACAGGCAGAAGCCACAGTGCACACGAACTCTGCTACTACACACAATGTGGGGAAATTTTCAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR GCA 90 bp ACTCATGGCCTGCTGCCGGCTGTCTTCTGCTATGAATCGTGCATCTaGTGCCTTCTACAAAATAAAAATGTAATAGTGTGGCAGCTGTAC +
Preference number: 1 (lower is better)
Translates to: THGLLPAVFCYESCI*CLLQNKNVIVWQLY
Trigger: GTACAGCTGCCACACTATTACATTTTTATTTTGTAGAAGGCAGCAGATGCACGATTCATAGCAGAAGACAGCCGGCAGCAGGCCATGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 90 bp TACAGATCAGTGTCTTGTTCAGCCATCGTCAGAGAAGCTCCCTCCTaGAGTAGATGGGAACAAACACAAGGACCCACAACTGTACAATAT +
Preference number: 1 (lower is better)
Translates to: YRSVSCSAIVREAPS*SRWEQTQGPTTVQY
Trigger: ATATTGTACAGTTGTGGGTCCTTGTGTTTGTTCCCATCTACTGCAGGAGGGAGCTTCTCTGACGATGGCTGAACAAGACACTGATCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 90 bp TACTACATAAGAACGTCAAATGTAGGAGCTAGAGAGCTGGCTCAGTaGTTAAGAGCACTGACTACTTCCATAGCCCCATCCCCAAGTTTG +
Preference number: 1 (lower is better)
Translates to: YYIRTSNVGARELAQ*LRALTTSIAPSPSL
Trigger: CAAACTTGGGGATGGGGCTATGGAAGTAGTCAGTGCTCTTAACCACTGAGCCAGCTCTCTAGCTCCTACATTTGACGTTCTTATGTAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 90 bp TGGGTACGTTTTTATGGTGTGCACTTGAGCAGACACATCATGATCTaGGTGGGTGAGATGTCCAGTGTTCCATGCACTATGAGTTTTCAC +
Preference number: 1 (lower is better)
Translates to: WVRFYGVHLSRHIMI*VGEMSSVPCTMSFH
Trigger: GTGAAAACTCATAGTGCATGGAACACTGGACATCTCACCCACTCAGATCATGATGTGTCTGCTCAAGTGCACACCATAAAAACGTACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR TCA 90 bp ACTGGGATCAATGTTGTGTGTGCAAACCATGTCCATCTGAGTACATaGGCTCCGGGGCAGTTGGGACTACACAATAAAACCATATTATCA +
Preference number: 1 (lower is better)
Translates to: TGINVVCANHVHLST*APGQLGLHNKTILS
Trigger: TGATAATATGGTTTTATTGTGTAGTCCCAACTGCCCCGGAGCTCATGTACTCAGATGGACATGGTTTGCACACACAACATTGATCCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 90 bp GAAAACACACCACGGACATGTATGAAAGCACACCACGGACATGTATaGAAGCACACCACGGACATGTATGAAAACACCAACACAACCAAT +
Preference number: 1 (lower is better)
Translates to: ENTPRTCMKAHHGHV*KHTTDMYENTNTTN
Trigger: ATTGGTTGTGTTGGTGTTTTCATACATGTCCGTGGTGTGCTTTCATACATGTCCGTGGTGTGCTTTCATACATGTCCGTGGTGTGTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 90 bp ATTCCAGTTCCAGGGGATCCAACACCCTCTTCTGGTTGGTCTCCATaGGAACCAGGCATACACATGATACACAGATATATAAACAAGCAA +
Preference number: 1 (lower is better)
Translates to: IPVPGDPTPSSGWSP*EPGIHMIHRYINKQ
Trigger: TTGCTTGTTTATATATCTGTGTATCATGTGTATGCCTGGTTCTCATGGAGACCAACCAGAAGAGGGTGTTGGATCCCCTGGAACTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 90 bp TTGTACTTATTTTGTTGGGGGATGAGGGAGGCATGTGTCACTGATTaGCATATACAAGTAGGTTCCAGGTATAGACCTCAGGGTATCAGG +
Preference number: 1 (lower is better)
Translates to: LYLFCWGMREACVTD*HIQVGSRYRPQGIR
Trigger: CCTGATACCCTGAGGTCTATACCTGGAACCTACTTGTATATGTCAATCAGTGACACATGCCTCCCTCATCCCCCAACAAAATAAGTACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 90 bp TTTTTATGGTGTGCACTTGAGCAGACACATCATGATCTGAGTGGGTaGGATGTCCAGTGTTCCATGCACTATGAGTTTTCACATGGGTCT +
Preference number: 1 (lower is better)
Translates to: FLWCALEQTHHDLSG*DVQCSMHYEFSHGS
Trigger: AGACCCATGTGAAAACTCATAGTGCATGGAACACTGGACATCTCACCCACTCAGATCATGATGTGTCTGCTCAAGTGCACACCATAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR CCA 90 bp AAGAGATCCTTAAAACACCGTCACATGCAAACTTGTACAGCCACATaGAAATTGGTGTCAGTTCCTCAGGAAGCTGGGAATAAATCCACC +
Preference number: 1 (lower is better)
Translates to: KRSLKHRHMQTCTAT*KLVSVPQEAGNKST
Trigger: GGTGGATTTATTCCCAGCTTCCTGAGGAACTGACACCAATTTCCATGTGGCTGTACAAGTTTGCATGTGACGGTGTTTTAAGGATCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 90 bp TTACCATCTTGTGAGTTCCAGGAGTGGAACTCAGTTTTCCTGATTTaGGGCATGCATCTTCAACCACTAAGCCATTATTTCTCCACCTGT +
Preference number: 1 (lower is better)
Translates to: LPSCEFQEWNSVFLI*GMHLQPLSHYFSTC
Trigger: ACAGGTGGAGAAATAATGGCTTAGTGGTTGAAGATGCATGCCCCAAATCAGGAAAACTGAGTTCCACTCCTGGAACTCACAAGATGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 90 bp GAATCTTTATCAGTCTTAAAGAAAGATGGCCAGGAGATGGCTCAGTaGGTAAAGGCACTTGCTGCCAATCAGATAGTGGAAAGAGAGAGT +
Preference number: 1 (lower is better)
Translates to: ESLSVLKKDGQEMAQ*VKALAANQIVERES
Trigger: ACTCTCTCTTTCCACTATCTGATTGGCAGCAAGTGCCTTTACCCACTGAGCCATCTCCTGGCCATCTTTCTTTAAGACTGATAAAGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 90 bp AATCCAGACCTGCAGAGGAAGGGAGTTCGGTTTCCAAGACAACAGTaGTGGCTTAACAATGTGAAACTTTATACAGAAGCTGTCCACATT +
Preference number: 1 (lower is better)
Translates to: NPDLQRKGVRFPRQQ*WLNNVKLYTEAVHI
Trigger: AATGTGGACAGCTTCTGTATAAAGTTTCACATTGTTAAGCCATCACTGTTGTCTTGGAAACCGAACTCCCTTCCTCTGCAGGTCTGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 90 bp AGCCTTACCCCTCTTGGGAATTTACCAAAAGGACACTACACTGTATaGTACAGAGTCAGATATTTGGTCAACCATATTCATTGCTGCTCT +
Preference number: 1 (lower is better)
Translates to: SLTPLGNLPKGHYTV*YRVRYLVNHIHCCS
Trigger: AGAGCAGCAATGAATATGGTTGACCAAATATCTGACTCTGTAGCATACAGTGTAGTGTCCTTTTGGTAAATTCCCAAGAGGGGTAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 90 bp AGGCTTTGTTGTATGAGTAGTCTTAAACATACATGCATGCATGCATaGGATGCCAGTTTCCATGTAGAGTTCAGAGAACAACTTGTGGGA +
Preference number: 1 (lower is better)
Translates to: RLCCMSSLKHTCMHA*DASFHVEFREQLVG
Trigger: TCCCACAAGTTGTTCTCTGAACTCTACATGGAAACTGGCATCGCATGCATGCATGCATGTATGTTTAAGACTACTCATACAACAAAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 90 bp TCAGCAGCCCAAGTTCTTATTATTGATAATTTGAGTGGGTGTGGATaGGTGCATTCTTCTATTGCATGTATGCTGAGGCTCTGTTATAGT +
Preference number: 1 (lower is better)
Translates to: SAAQVLIIDNLSGCG*VHSSIACMLRLCYS
Trigger: ACTATAACAGAGCCTCAGCATACATGCAATAGAAGAATGCACCCATCCACACCCACTCAAATTATCAATAATAAGAACTTGGGCTGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 90 bp GAATCGTGCATCTGCTGCCTTCTACAAAATAAAAATGTAATAGTGTaGCAGCTGTACCCTAGGTACTTCCCAAAGCACAACAAACAATAT +
Preference number: 1 (lower is better)
Translates to: ESCICCLLQNKNVIV*QLYPRYFPKHNKQY
Trigger: ATATTGTTTGTTGTGCTTTGGGAAGTACCTAGGGTACAGCTGCCACACTATTACATTTTTATTTTGTAGAAGGCAGCAGATGCACGATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 90 bp AGCTGTTTGTCCTCTGCCACAGTATACTCTGTTAGACTTAGAGGATaGGGTATAAAGTTGTGTTTCAGCACAGATTATAAAGGGATCATA +
Preference number: 1 (lower is better)
Translates to: SCLSSATVYSVRLRG*GIKLCFSTDYKGII
Trigger: TATGATCCCTTTATAATCTGTGCTGAAACACAACTTTATACCCCATCCTCTAAGTCTAACAGAGTATACTGTGGCAGAGGACAAACAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 90 bp TTTTTACCATGTGAGTCTCAGAGACTAAATTCTGGTCAACAGGCTTaGAGACAAACACCTTTACATTTAAGGATATTGAGAAAACTTCTG +
Preference number: 1 (lower is better)
Translates to: FLPCESQRLNSGQQA*RQTPLHLRILRKLL
Trigger: CAGAAGTTTTCTCAATATCCTTAAATGTAAAGGTGTTTGTCTTCAAGCCTGTTGACCAGAATTTAGTCTCTGAGACTCACATGGTAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 90 bp TCTCCCACTCCCACTGTGTTCACTTTATACGCTAGGATTTATTCATaGTCTGAAAGTATATTTCAATCAATTATTGCCGTGATACATATC +
Preference number: 1 (lower is better)
Translates to: SPTPTVFTLYARIYS*SESIFQSIIAVIHI
Trigger: GATATGTATCACGGCAATAATTGATTGAAATATACTTTCAGATCATGAATAAATCCTAGCGTATAAAGTGAACACAGTGGGAGTGGGAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp GGCCTAGTGGCAAGCACCCTTTTACCTACTGAGCTGTCACACCAGCCTGAGCACCCCCATCCCCAAGTTTaGTTCCCAGAACTCACATGG +
Preference number: 2 (lower is better)
Translates to: GLVASTLLPTELSHQPEHPHPQV*FPELTW
Trigger: CCATGTGAGTTCTGGGAATCAAACTTGGGGATGGGG...GTGCTCAGGCTGGTGTGACAGCTCAGTAGGTAAAAGGGTGCTTGCCACTAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 90 bp TGGTCCTCTCCTTTCACTGTGTGGGTTCCAGGGACGGAACTCAGGTaGTCAGGCCTAGTGGCAAGCACCCTTTTACCTACTGAGCTGTCA +
Preference number: 2 (lower is better)
Translates to: WSSPFTVWVPGTELR*SGLVASTLLPTELS
Trigger: TGACAGCTCAGTAGGTAAAAGGGTGCTTGCCACTAGGCCTGACAACCTGAGTTCCGTCCCTGGAACCCACACAGTGAAAGGAGAGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 90 bp CCGTATTCACAGAGGCGGGTCTCTCAGCTGCTCTTGCTAGCCAGATaGCTTTGGAGATCCTGCCTTCGGAGTGTTGAAATTACACGTGGG +
Preference number: 2 (lower is better)
Translates to: PYSQRRVSQLLLLAR*LWRSCLRSVEITRG
Trigger: CCCACGTGTAATTTCAACACTCCGAAGGCAGGATCTCCAAAGCAATCTGGCTAGCAAGAGCAGCTGAGAGACCCGCCTCTGTGAATACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp CTCTCCACCGTATTCACAGAGGCGGGTCTCTCAGCTGCTCTTGCTAGCCAGATTAGAAGAGGAAGAGTCTaGCCTCCTGGAGTGTGTGTA +
Preference number: 2 (lower is better)
Translates to: LSTVFTEAGLSAALASQIRRGRV*PPGVCV
Trigger: TACACACACTCCAGGAGGTCAGACTCTTCCTCTTCT...AATCTGGCTAGCAAGAGCAGCTGAGAGACCCGCCTCTGTGAATACGGTGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp CTCTCCACCGTATTCACAGAGGCGGGTCTCTCAGCTGCTCTTGCTAGCCAGATTCTGCCTCCTGAGTACTaGGATCAATGTTGTGTGTGC +
Preference number: 2 (lower is better)
Translates to: LSTVFTEAGLSAALASQILPPEY*DQCCVC
Trigger: GCACACACAACATTGATCCCAGTACTCAGGAGGCAG...AATCTGGCTAGCAAGAGCAGCTGAGAGACCCGCCTCTGTGAATACGGTGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp TTACACGTGGGCAGACATGCCCACGCCTCATTTACTTGGGTTCTGGAGATTCAGAGGTGGCCAAGAACTTaGGACTGGACAGGCCATGAA +
Preference number: 2 (lower is better)
Translates to: LHVGRHAHASFTWVLEIQRWPRT*DWTGHE
Trigger: TTCATGGCCTGTCCAGTCTCAAGTTCTTGGCCACCT...CTGAATCTCCAGAACCCAAGTAAATGAGGCGTGGGCATGTCTGCCCACGTGTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR GCA 90 bp AGTGTTGAAATTACACGTGGGCAGACATGCCCACGCCTCATTTACTTGGGTTCTGGACTCATGGCCTGCTaGCGGCTGTCTTCTGCTATG +
Preference number: 2 (lower is better)
Translates to: SVEITRGQTCPRLIYLGSGLMAC*RLSSAM
Trigger: CATAGCAGAAGACAGCCGGCAGCAGGCCATGAGTCC...AGAACCCAAGTAAATGAGGCGTGGGCATGTCTGCCCACGTGTAATTTCAACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR GCA 90 bp CTCTCCACCGTATTCACAGAGGCGGGTCTCTCAGCTGCTCTTGCTAGCCAGATTTGCCGAAAGATGCCATaGACACTGTCAGAGGACAAA +
Preference number: 2 (lower is better)
Translates to: LSTVFTEAGLSAALASQICRKMP*TLSEDK
Trigger: TTTGTCCTCTGACAGTGTGCATGGCATCTTTCGGCA...AATCTGGCTAGCAAGAGCAGCTGAGAGACCCGCCTCTGTGAATACGGTGGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR GCA 90 bp ACGGAACTCAGGTTGTCAGGCCTAGTGGCAAGCACCCTTTTACCTACTGAGCTGATCAAGAGATTTACCTaGTGCTGCCTCCCCAGTGCT +
Preference number: 2 (lower is better)
Translates to: TELRLSGLVASTLLPTELIKRFT*CCLPSA
Trigger: AGCACTGGGGAGGCAGCAGCAGGTAAATCTCTTGAT...CAGCTCAGTAGGTAAAAGGGTGCTTGCCACTAGGCCTGACAACCTGAGTTCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp ACGGAACTCAGGTTGTCAGGCCTAGTGGCAAGCACCCTTTTACCTACTGAGCTGCACCACAGACATGTATaGAAACACACCACGGACATG +
Preference number: 2 (lower is better)
Translates to: TELRLSGLVASTLLPTELHHRHV*KHTTDM
Trigger: CATGTCCGTGGTGTGTTTTCATACATGTCTGTGGTG...CAGCTCAGTAGGTAAAAGGGTGCTTGCCACTAGGCCTGACAACCTGAGTTCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp CTCTCCACCGTATTCACAGAGGCGGGTCTCTCAGCTGCTCTTGCTAGCCAGATTGAACTTCTCACATCCTaGGTGCTAGGATTACAGATG +
Preference number: 2 (lower is better)
Translates to: LSTVFTEAGLSAALASQIELLTS*VLGLQM
Trigger: CATCTGTAATCCTAGCACTCAGGATGTGAGAAGTTC...AATCTGGCTAGCAAGAGCAGCTGAGAGACCCGCCTCTGTGAATACGGTGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp CTCTCCACCGTATTCACAGAGGCGGGTCTCTCAGCTGCTCTTGCTAGCCAGATTATCAGAGAAGTTGTATaGGAAAATGTGGAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: LSTVFTEAGLSAALASQIIREVV*ENVEPG
Trigger: CCCTGGCTCCACATTTTCCCATACAACTTCTCTGAT...AATCTGGCTAGCAAGAGCAGCTGAGAGACCCGCCTCTGTGAATACGGTGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp GGCCTAGTGGCAAGCACCCTTTTACCTACTGAGCTGTCACACCAGCCTGAGCACGGTGCATTATTGCCGTaGCAATTCTCTTTTACCATC +
Preference number: 2 (lower is better)
Translates to: GLVASTLLPTELSHQPEHGALLP*QFSFTI
Trigger: GATGGTAAAAGAGAATTGCCACGGCAATAATGCACC...GTGCTCAGGCTGGTGTGACAGCTCAGTAGGTAAAAGGGTGCTTGCCACTAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp GGCCTAGTGGCAAGCACCCTTTTACCTACTGAGCTGTCACACCAGCCTGAGCACACTACTCTGTATCTCTaGCTGTCTGGAACTCATTCT +
Preference number: 2 (lower is better)
Translates to: GLVASTLLPTELSHQPEHTTLYL*LSGTHS
Trigger: AGAATGAGTTCCAGACAGCCAGAGATACAGAGTAGT...GTGCTCAGGCTGGTGTGACAGCTCAGTAGGTAAAAGGGTGCTTGCCACTAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp CTCTCCACCGTATTCACAGAGGCGGGTCTCTCAGCTGCTCTTGCTAGCCAGATTCCAGAACTCACATGGTaGCTCACAAGCATCTGTAAT +
Preference number: 2 (lower is better)
Translates to: LSTVFTEAGLSAALASQIPELTW*LTSICN
Trigger: ATTACAGATGCTTGTGAGCCACCATGTGAGTTCTGG...AATCTGGCTAGCAAGAGCAGCTGAGAGACCCGCCTCTGTGAATACGGTGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 90 bp AGTGTTGAAATTACACGTGGGCAGACATGCCCACGCCTCATTTACTaGGGTTCTGGAGATTCAGACTTTGGTCCCACACTGTGGGACAAG +
Preference number: 2 (lower is better)
Translates to: SVEITRGQTCPRLIY*GSGDSDFGPTLWDK
Trigger: CTTGTCCCACAGTGTGGGACCAAAGTCTGAATCTCCAGAACCCAAGTAAATGAGGCGTGGGCATGTCTGCCCACGTGTAATTTCAACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp CCATCTTGTGAGTTCCAGGAGTGGAACTCAGTTTTCCTGATTTGGGGCATGCATCCCTCCTGCAGTAGATaGGAACAAACACAAGGACCC +
Preference number: 2 (lower is better)
Translates to: PSCEFQEWNSVFLIWGMHPSCSR*EQTQGP
Trigger: GGGTCCTTGTGTTTGTTCCCATCTACTGCAGGAGGG...ATGCATGCCCCAAATCAGGAAAACTGAGTTCCACTCCTGGAACTCACAAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp CTCTCCACCGTATTCACAGAGGCGGGTCTCTCAGCTGCTCTTGCTAGCCAGATTTCAGTTTTCCTGATTTaGGGCATGCATCTTCAACCA +
Preference number: 2 (lower is better)
Translates to: LSTVFTEAGLSAALASQISVFLI*GMHLQP
Trigger: TGGTTGAAGATGCATGCCCCAAATCAGGAAAACTGA...AATCTGGCTAGCAAGAGCAGCTGAGAGACCCGCCTCTGTGAATACGGTGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 90 bp AGACATGCCCACGCCTCATTTACTTGGGTTCTGGAGATTCAGACTTaGGTCCCACACTGTGGGACAAGTGCTTTATCCATTGAGCCATCT +
Preference number: 2 (lower is better)
Translates to: RHAHASFTWVLEIQT*VPHCGTSALSIEPS
Trigger: AGATGGCTCAATGGATAAAGCACTTGTCCCACAGTGTGGGACCAAAGTCTGAATCTCCAGAACCCAAGTAAATGAGGCGTGGGCATGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp CACAATGGAATCTTTATCAGTCTTAAAGAAAGATGGCCAGGAGATGGCTCAGTGCTAAGCCAGACAGCCTaGGTTGGATCCCTGGGACTC +
Preference number: 2 (lower is better)
Translates to: HNGIFISLKERWPGDGSVLSQTA*VGSLGL
Trigger: GAGTCCCAGGGATCCAACTCAGGCTGTCTGGCTTAG...CACTGAGCCATCTCCTGGCCATCTTTCTTTAAGACTGATAAAGATTCCATTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp GGCCTAGTGGCAAGCACCCTTTTACCTACTGAGCTGTCACACCAGCCTGAGCACCAGTGTGCTCAGTTTTaGGTGTATCAAAGCATTATT +
Preference number: 2 (lower is better)
Translates to: GLVASTLLPTELSHQPEHQCAQF*VYQSII
Trigger: AATAATGCTTTGATACACTCAAAACTGAGCACACTG...GTGCTCAGGCTGGTGTGACAGCTCAGTAGGTAAAAGGGTGCTTGCCACTAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR GCA 90 bp TTATCCATCACCTCACCTCGAGCCATCTCAGCAGCCCAAGTTCTTATTATTGATAAGAGATTTACCTGCTaGTGCCTCCCCAGTGCTGGG +
Preference number: 2 (lower is better)
Translates to: LSITSPRAISAAQVLIIDKRFTC*CLPSAG
Trigger: CCCAGCACTGGGGAGGCAGCAGCAGGTAAATCTCTT...ATCAATAATAAGAACTTGGGCTGCTGAGATGGCTCGAGGTGAGGTGATGGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp TATGATGCACCATCCAGGTCTACCAGAGGCAAAACACAGGGACAGGAGGCTGGGTGCTGCCAGCACACATaGACAAAATTTCCATATAGT +
Preference number: 2 (lower is better)
Translates to: YDAPSRSTRGKTQGQEAGCCQHT*TKFPYS
Trigger: ACTATATGGAAATTTTGTCCATGTGTGCTGGCAGCA...CCCAGCCTCCTGTCCCTGTGTTTTGCCTCTGGTAGACCTGGATGGTGCATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp TTACACGTGGGCAGACATGCCCACGCCTCATTTACTTGGGTTCTGGAGATTCAGTTTGGTCCCACACTGTaGGACAAGTGCTTTATCCAT +
Preference number: 2 (lower is better)
Translates to: LHVGRHAHASFTWVLEIQFGPTL*DKCFIH
Trigger: ATGGATAAAGCACTTGTCCCACAGTGTGGGACCAAA...CTGAATCTCCAGAACCCAAGTAAATGAGGCGTGGGCATGTCTGCCCACGTGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 90 bp CATGGCTACATAGAGAAATTCTGTAGTCCTGTACGGTGTGTGTGTTaGAATGGGCATGTGGAGGTCCCAGGGCAGCATGAAGAGTCTTTT +
Preference number: 2 (lower is better)
Translates to: HGYIEKFCSPVRCVC*NGHVEVPGQHEESF
Trigger: AAAAGACTCTTCATGCTGCCCTGGGACCTCCACATGCCCATTCAAACACACACACCGTACAGGACTACAGAATTTCTCTATGTAGCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp ACGGAACTCAGGTTGTCAGGCCTAGTGGCAAGCACCCTTTTACCTACTGAGCTGGGAGGGGTTGTACTATaGTTTATATCTGAAATGGAC +
Preference number: 2 (lower is better)
Translates to: TELRLSGLVASTLLPTELGGVVL*FISEMD
Trigger: GTCCATTTCAGATATAAATCATAGTACAACCCCTCC...CAGCTCAGTAGGTAAAAGGGTGCTTGCCACTAGGCCTGACAACCTGAGTTCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp CACAATGGAATCTTTATCAGTCTTAAAGAAAGATGGCCAGGAGATGGCTCAGTGGTGAGCATCCCAGTGTaGGTGCTGGGAACTAAACGC +
Preference number: 2 (lower is better)
Translates to: HNGIFISLKERWPGDGSVVSIPV*VLGTKR
Trigger: GCGTTTAGTTCCCAGCACTCACACTGGGATGCTCAC...CACTGAGCCATCTCCTGGCCATCTTTCTTTAAGACTGATAAAGATTCCATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp TTACACGTGGGCAGACATGCCCACGCCTCATTTACTTGGGTTCTGGAGATTCAGTGGACACAAGAGATATaGACCCTGTCCTTTTCATTG +
Preference number: 2 (lower is better)
Translates to: LHVGRHAHASFTWVLEIQWTQEI*TLSFSL
Trigger: CAATGAAAAGGACAGGGTTCATATCTCTTGTGTCCA...CTGAATCTCCAGAACCCAAGTAAATGAGGCGTGGGCATGTCTGCCCACGTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR GCA 90 bp TTATCCATCACCTCACCTCGAGCCATCTCAGCAGCCCAAGTTCTTATTATTGATAAAGCCAAGGCCTTGTaGTTGCTAGAGGCCTCCAAC +
Preference number: 2 (lower is better)
Translates to: LSITSPRAISAAQVLIIDKAKAL*LLEASN
Trigger: GTTGGAGGCCTCTAGCAAGCACAAGGCCTTGGCTTT...ATCAATAATAAGAACTTGGGCTGCTGAGATGGCTCGAGGTGAGGTGATGGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp CTTCCCACATACTTTCTCCAAACCAAAGCTGGATTCTCATCATTTTCTACTTCACCTGAGTTGGATCCCTaGGACTCATGGCCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: LPTYFLQTKAGFSSFSTSPELDP*DSWPAA
Trigger: GGCAGCAGGCCATGAGTCCCAGGGATCCAACTCAGG...TGAAGTAGAAAATGATGAGAATCCAGCTTTGGTTTGGAGAAAGTATGTGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp ACGGAACTCAGGTTGTCAGGCCTAGTGGCAAGCACCCTTTTACCTACTGAGCTGTTGTATGGGAAAATGTaGAGCCAGGGATATAGCTTA +
Preference number: 2 (lower is better)
Translates to: TELRLSGLVASTLLPTELLYGKM*SQGYSL
Trigger: TAAGCTATATCCCTGGCTCCACATTTTCCCATACAA...CAGCTCAGTAGGTAAAAGGGTGCTTGCCACTAGGCCTGACAACCTGAGTTCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp TTATCCATCACCTCACCTCGAGCCATCTCAGCAGCCCAAGTTCTTATTATTGATGAGGAAGAGATTAGGTaGGGACAATGGGTCTCCCTG +
Preference number: 2 (lower is better)
Translates to: LSITSPRAISAAQVLIIDEEEIR*GQWVSL
Trigger: CAGGGAGACCCATTGTCCCCACCTAATCTCTTCCTC...ATCAATAATAAGAACTTGGGCTGCTGAGATGGCTCGAGGTGAGGTGATGGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp TTACACGTGGGCAGACATGCCCACGCCTCATTTACTTGGGTTCTGGAGATTCAGACTTGTACAGCCACATaGAAATTGGTGTCAGTTCCT +
Preference number: 2 (lower is better)
Translates to: LHVGRHAHASFTWVLEIQTCTAT*KLVSVP
Trigger: AGGAACTGACACCAATTTCCATGTGGCTGTACAAGT...CTGAATCTCCAGAACCCAAGTAAATGAGGCGTGGGCATGTCTGCCCACGTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp TTACACGTGGGCAGACATGCCCACGCCTCATTTACTTGGGTTCTGGAGATTCAGTGTGAGTTCCAGGAGTaGAACTCAGTTTTCCTGATT +
Preference number: 2 (lower is better)
Translates to: LHVGRHAHASFTWVLEIQCEFQE*NSVFLI
Trigger: AATCAGGAAAACTGAGTTCCACTCCTGGAACTCACA...CTGAATCTCCAGAACCCAAGTAAATGAGGCGTGGGCATGTCTGCCCACGTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp ACGGAACTCAGGTTGTCAGGCCTAGTGGCAAGCACCCTTTTACCTACTGAGCTGACAATCTTAGGTAGTTaGTTTGCTGTTTCCACCTTG +
Preference number: 2 (lower is better)
Translates to: TELRLSGLVASTLLPTELTILGS*FAVSTL
Trigger: CAAGGTGGAAACAGCAAACCAACTACCTAAGATTGT...CAGCTCAGTAGGTAAAAGGGTGCTTGCCACTAGGCCTGACAACCTGAGTTCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp AGTGTTGAAATTACACGTGGGCAGACATGCCCACGCCTCATTTACTTGGGTTCTTTCCCAGAACTCACATaGTGGCTCACAAGCATCTGT +
Preference number: 2 (lower is better)
Translates to: SVEITRGQTCPRLIYLGSFPELT*WLTSIC
Trigger: ACAGATGCTTGTGAGCCACCATGTGAGTTCTGGGAA...AGAACCCAAGTAAATGAGGCGTGGGCATGTCTGCCCACGTGTAATTTCAACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp GCGAAAGTTCACAATAAATATCACTCAACAGGCCTTATTGCTGCCAGCACACATGACGAAACCAAGACATaGGGGGTGAAGGGTTTCTGG +
Preference number: 2 (lower is better)
Translates to: AKVHNKYHSTGLIAASTHDETKT*GVKGFW
Trigger: CCAGAAACCCTTCACCCCTCATGTCTTGGTTTCGTC...ATGTGTGCTGGCAGCAATAAGGCCTGTTGAGTGATATTTATTGTGAACTTTCGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000115557.10
ENSMUST00000140668.8
3UTR-3UTR GCA 90 bp CACAATGGAATCTTTATCAGTCTTAAAGAAAGATGGCCAGGAGATGGCTCAGTGGCATCCCAGTGTGAGTaGTGGGAACTAAACGCTGGT +
Preference number: 2 (lower is better)
Translates to: HNGIFISLKERWPGDGSVASQCE*WELNAG
Trigger: ACCAGCGTTTAGTTCCCAGCACTCACACTGGGATGC...CACTGAGCCATCTCCTGGCCATCTTTCTTTAAGACTGATAAAGATTCCATTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp ACGGAACTCAGGTTGTCAGGCCTAGTGGCAAGCACCCTTTTACCTACTGAGCTGGATTTATATCTGAAATaGACCCCCAAAAGTTCATGC +
Preference number: 2 (lower is better)
Translates to: TELRLSGLVASTLLPTELDLYLK*TPKSSC
Trigger: GCATGAACTTTTGGGGGTCCATTTCAGATATAAATC...CAGCTCAGTAGGTAAAAGGGTGCTTGCCACTAGGCCTGACAACCTGAGTTCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp TACTCACTTAGCTTTGACCACCTCGATGTAATGTGCTGGGTGTTCATTTTGGTCTCCTTGGGACCCACATaGTGGAAGAAGGGAACAGAT +
Preference number: 2 (lower is better)
Translates to: YSLSFDHLDVMCWVFILVSLGPT*WKKGTD
Trigger: ATCTGTTCCCTTCTTCCACCATGTGGGTCCCAAGGA...GACCAAAATGAACACCCAGCACATTACATCGAGGTGGTCAAAGCTAAGTGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 90 bp AACACAAGGACCCACAACTGTACAATATGCAGAGAGGGAGAGACCTaGGAACGCTCTGTCGTAAACAAATTCCCCCTGAAGATATTGAAG +
Preference number: 2 (lower is better)
Translates to: NTRTHNCTICREGET*ERSVVNKFPLKILK
Trigger: CTTCAATATCTTCAGGGGGAATTTGTTTACGACAGAGCGTTCCAAGGTCTCTCCCTCTCTGCATATTGTACAGTTGTGGGTCCTTGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp ACAAGTGTCTGGCTAGTAGGGAAAATCTACTGTAGGCTTCCCTATATTCTCAACGGTCTCTCTCCACTGTaGGTTCTTAAGTGTCTACGC +
Preference number: 2 (lower is better)
Translates to: TSVWLVGKIYCRLPYILNGLSPL*VLKCLR
Trigger: GCGTAGACACTTAAGAACTCACAGTGGAGAGAGACC...GTTGAGAATATAGGGAAGCCTACAGTAGATTTTCCCTACTAGCCAGACACTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR-3UTR GCA 90 bp CGGCTGTCTTCTGCTATGAATCGTGCATCTGCTGCCTTCTACAAAATAAAAATGGGGAACAGATTCCAGTaGATGTCTCATCTCCTCTCC +
Preference number: 2 (lower is better)
Translates to: RLSSAMNRASAAFYKIKMGNRFQ*MSHLLS
Trigger: GGAGAGGAGATGAGACATGCACTGGAATCTGTTCCC...CATTTTTATTTTGTAGAAGGCAGCAGATGCACGATTCATAGCAGAAGACAGCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR GCA 90 bp GTTACAAGTGTCTGGCTAGTAGGGAAAATCTACTGTAGGCTTCCCTATATTCTCGTGCACTGTGGCTTCTaGCTGTTTGTATTCCACTGG +
Preference number: 2 (lower is better)
Translates to: VTSVWLVGKIYCRLPYILVHCGF*LFVFHW
Trigger: CCAGTGGAATACAAACAGGCAGAAGCCACAGTGCAC...GAGAATATAGGGAAGCCTACAGTAGATTTTCCCTACTAGCCAGACACTTGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR-3UTR CCA 90 bp TTACTATCCAGAAGTTATAGCAGCCAACATAAAATGGAGTTCCTTGAAGAAAAGGATCCCTGGGACTCATaGCCTGCTGCCGGCTGTCTT +
Preference number: 2 (lower is better)
Translates to: LLSRSYSSQHKMEFLEEKDPWDS*PAAGCL
Trigger: AAGACAGCCGGCAGCAGGCCATGAGTCCCAGGGATC...CTTTTCTTCAAGGAACTCCATTTTATGTTGGCTGCTATAACTTCTGGATAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp CTTCCCACATACTTTCTCCAAACCAAAGCTGGATTCTCATCATTTTCTACTTCATGTTGGGGAAGGGGGTaGCAGGTGCATTATTGCCGT +
Preference number: 2 (lower is better)
Translates to: LPTYFLQTKAGFSSFSTSCWGRG*QVHYCR
Trigger: ACGGCAATAATGCACCTGCCACCCCCTTCCCCAACA...TGAAGTAGAAAATGATGAGAATCCAGCTTTGGTTTGGAGAAAGTATGTGGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp TACTCACTTAGCTTTGACCACCTCGATGTAATGTGCTGGGTGTTCATTTTGGTCTGGAGATTCAGACTTTaGTCCCACACTGTGGGACAA +
Preference number: 2 (lower is better)
Translates to: YSLSFDHLDVMCWVFILVWRFRL*SHTVGQ
Trigger: TTGTCCCACAGTGTGGGACCAAAGTCTGAATCTCCA...GACCAAAATGAACACCCAGCACATTACATCGAGGTGGTCAAAGCTAAGTGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp TACTCACTTAGCTTTGACCACCTCGATGTAATGTGCTGGGTGTTCATTTTGGTCAGAGGCAAAGGTAGGTaGATCTCTGGTCTACAAAGC +
Preference number: 2 (lower is better)
Translates to: YSLSFDHLDVMCWVFILVRGKGR*ISGLQS
Trigger: GCTTTGTAGACCAGAGATCCACCTACCTTTGCCTCT...GACCAAAATGAACACCCAGCACATTACATCGAGGTGGTCAAAGCTAAGTGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 90 bp TCACCTCGAGCCATCTCAGCAGCCCAAGTTCTTATTATTGATAATTaGAGTGGGTGTGGATGGGTGCATTCTTCTATTGCATGTATGCTG +
Preference number: 2 (lower is better)
Translates to: SPRAISAAQVLIIDN*SGCGWVHSSIACML
Trigger: CAGCATACATGCAATAGAAGAATGCACCCATCCACACCCACTCAAATTATCAATAATAAGAACTTGGGCTGCTGAGATGGCTCGAGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 90 bp CAGAGCTCTAGTGTGGTAAAAGGACTTGCAGTTAAGCTTAGCTACTaGAGTTACATCCCTGGAACCCACAGTGGAAAGAATGAACTGACT +
Preference number: 2 (lower is better)
Translates to: QSSSVVKGLAVKLSY*SYIPGTHSGKNELT
Trigger: AGTCAGTTCATTCTTTCCACTGTGGGTTCCAGGGATGTAACTCAAGTAGCTAAGCTTAACTGCAAGTCCTTTTACCACACTAGAGCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp CGGCTGTCTTCTGCTATGAATCGTGCATCTGCTGCCTTCTACAAAATAAAAATGTCTTCCTATCTGAAGTaGCTGCTCACGGTGAGTTAC +
Preference number: 2 (lower is better)
Translates to: RLSSAMNRASAAFYKIKMSSYLK*LLTVSY
Trigger: GTAACTCACCGTGAGCAGTCACTTCAGATAGGAAGA...CATTTTTATTTTGTAGAAGGCAGCAGATGCACGATTCATAGCAGAAGACAGCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp AGTGTTGAAATTACACGTGGGCAGACATGCCCACGCCTCATTTACTTGGGTTCTAATACAGCAATGAAATaGCTCCTAACAACGTTCTGC +
Preference number: 2 (lower is better)
Translates to: SVEITRGQTCPRLIYLGSNTAMK*LLTTFC
Trigger: GCAGAACGTTGTTAGGAGTCATTTCATTGCTGTATT...AGAACCCAAGTAAATGAGGCGTGGGCATGTCTGCCCACGTGTAATTTCAACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR GCA 90 bp CACAATAAATATCACTCAACAGGCCTTATTGCTGCCAGCACACATGGACAAAATCTCAACAGGCCTTATTaGTGCCAGCACACATGGACA +
Preference number: 2 (lower is better)
Translates to: HNKYHSTGLIAASTHGQNLNRPY*CQHTWT
Trigger: TGTCCATGTGTGCTGGCAGCAATAAGGCCTGTTGAG...ATTTTGTCCATGTGTGCTGGCAGCAATAAGGCCTGTTGAGTGATATTTATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000115557.10
ENSMUST00000140668.8
3UTR-3UTR GCA 90 bp CTTCCCACATACTTTCTCCAAACCAAAGCTGGATTCTCATCATTTTCTACTTCACAAACTCAAGAGATCTaGCTGCCTCTGCCTCCTGAG +
Preference number: 2 (lower is better)
Translates to: LPTYFLQTKAGFSSFSTSQTQEI*LPLPPE
Trigger: CTCAGGAGGCAGAGGCAGGCAGATCTCTTGAGTTTG...TGAAGTAGAAAATGATGAGAATCCAGCTTTGGTTTGGAGAAAGTATGTGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp AGTGTTGAAATTACACGTGGGCAGACATGCCCACGCCTCATTTACTTGGGTTCTTCAGAGACTAAATTCTaGTCAACAGGCTTGAAGACA +
Preference number: 2 (lower is better)
Translates to: SVEITRGQTCPRLIYLGSSETKF*STGLKT
Trigger: TGTCTTCAAGCCTGTTGACCAGAATTTAGTCTCTGA...AGAACCCAAGTAAATGAGGCGTGGGCATGTCTGCCCACGTGTAATTTCAACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp CACAATGGAATCTTTATCAGTCTTAAAGAAAGATGGCCAGGAGATGGCTCAGTGGTATCTCTGGCTGTCTaGAACTCATTCTGTAGACCC +
Preference number: 2 (lower is better)
Translates to: HNGIFISLKERWPGDGSVVSLAV*NSFCRP
Trigger: GGGTCTACAGAATGAGTTCCAGACAGCCAGAGATAC...CACTGAGCCATCTCCTGGCCATCTTTCTTTAAGACTGATAAAGATTCCATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp TACTCACTTAGCTTTGACCACCTCGATGTAATGTGCTGGGTGTTCATTTTGGTCGCTGGCTTGAACTCCTaGACTCAAGTAATATTCCTG +
Preference number: 2 (lower is better)
Translates to: YSLSFDHLDVMCWVFILVAGLNS*TQVIFL
Trigger: CAGGAATATTACTTGAGTCCAGGAGTTCAAGCCAGC...GACCAAAATGAACACCCAGCACATTACATCGAGGTGGTCAAAGCTAAGTGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 90 bp GACAGTTTGGGTTCTCTTGCTTGGCTCAGTGCTGGCTTTATTGGATaGTGGGCAACAAAAGTATTGAGTAGTTATCTGACTGTGTCACTA +
Preference number: 2 (lower is better)
Translates to: DSLGSLAWLSAGFIG*WATKVLSSYLTVSL
Trigger: TAGTGACACAGTCAGATAACTACTCAATACTTTTGTTGCCCACAATCCAATAAAGCCAGCACTGAGCCAAGCAAGAGAACCCAAACTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp TTATCCATCACCTCACCTCGAGCCATCTCAGCAGCCCAAGTTCTTATTATTGATTGCATCTTACATCAGTaGTTTCCCCTCATTGTGAAG +
Preference number: 2 (lower is better)
Translates to: LSITSPRAISAAQVLIIDCILHQ*FPLIVK
Trigger: CTTCACAATGAGGGGAAATCACTGATGTAAGATGCA...ATCAATAATAAGAACTTGGGCTGCTGAGATGGCTCGAGGTGAGGTGATGGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp CACAATGGAATCTTTATCAGTCTTAAAGAAAGATGGCCAGGAGATGGCTCAGTGAATCAGAGGACTACTTaGCAATGCTGGTGCTCTCTT +
Preference number: 2 (lower is better)
Translates to: HNGIFISLKERWPGDGSVNQRTT*QCWCSL
Trigger: AAGAGAGCACCAGCATTGTCAAGTAGTCCTCTGATT...CACTGAGCCATCTCCTGGCCATCTTTCTTTAAGACTGATAAAGATTCCATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR GCA 90 bp ATTCAAACGGCTTTTCAACTGCATGAGTTTTTAAGTGGTCGTGTAGCAGATTGTCTCAACAGGCCTTATTaGTGCCAGCACACATGGACA +
Preference number: 2 (lower is better)
Translates to: IQTAFQLHEFLSGRVADCLNRPY*CQHTWT
Trigger: TGTCCATGTGTGCTGGCAGCAATAAGGCCTGTTGAG...ACAATCTGCTACACGACCACTTAAAAACTCATGCAGTTGAAAAGCCGTTTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR-3UTR GCA 90 bp TACTCACTTAGCTTTGACCACCTCGATGTAATGTGCTGGGTGTTCATTTTGGTCGATCAATGTTGTGTGTaGAAACCATGTCCATCTGAG +
Preference number: 2 (lower is better)
Translates to: YSLSFDHLDVMCWVFILVDQCCV*KPCPSE
Trigger: CTCAGATGGACATGGTTTGCACACACAACATTGATC...GACCAAAATGAACACCCAGCACATTACATCGAGGTGGTCAAAGCTAAGTGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp ACAAGTGTCTGGCTAGTAGGGAAAATCTACTGTAGGCTTCCCTATATTCTCAACGGGGTGAAGGGTTTCTaGTATTCTTCCTATCTGAAG +
Preference number: 2 (lower is better)
Translates to: TSVWLVGKIYCRLPYILNGVKGF*YSSYLK
Trigger: CTTCAGATAGGAAGAATACCAGAAACCCTTCACCCC...GTTGAGAATATAGGGAAGCCTACAGTAGATTTTCCCTACTAGCCAGACACTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR-3UTR CCA 90 bp GCAAGTAGTTCTGCATATGTGTGTCATGGCGCATGTCAACATTCACAAAATAAATTGGGACCCACATGGTaGAAGAAGGGAACAGATTCC +
Preference number: 2 (lower is better)
Translates to: ASSSAYVCHGACQHSQNKLGPTW*KKGTDS
Trigger: GGAATCTGTTCCCTTCTTCCACCATGTGGGTCCCAA...TTTATTTTGTGAATGTTGACATGCGCCATGACACACATATGCAGAACTACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp GCAAGTAGTTCTGCATATGTGTGTCATGGCGCATGTCAACATTCACAAAATAAAGACAATGGGTCTCCCTaGGACAGGGAAATAGAACAG +
Preference number: 2 (lower is better)
Translates to: ASSSAYVCHGACQHSQNKDNGSP*DREIEQ
Trigger: CTGTTCTATTTCCCTGTCCCAGGGAGACCCATTGTC...TTTATTTTGTGAATGTTGACATGCGCCATGACACACATATGCAGAACTACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp TCCTCTGCCACAGTATACTCTGTTAGACTTAGAGGATGGGGTATAAAGTTGTGTAGGGGAGCACATATGTaGAAATCAGAGGACTACTTG +
Preference number: 2 (lower is better)
Translates to: SSATVYSVRLRGWGIKLCRGAHM*KSEDYL
Trigger: CAAGTAGTCCTCTGATTTCCACATATGTGCTCCCCT...ACACAACTTTATACCCCATCCTCTAAGTCTAACAGAGTATACTGTGGCAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp ATTCAAACGGCTTTTCAACTGCATGAGTTTTTAAGTGGTCGTGTAGCAGATTGTTCTTCCTATCTGAAGTaGCTGCTCACGGTGAGTTAC +
Preference number: 2 (lower is better)
Translates to: IQTAFQLHEFLSGRVADCSSYLK*LLTVSY
Trigger: GTAACTCACCGTGAGCAGTCACTTCAGATAGGAAGA...ACAATCTGCTACACGACCACTTAAAAACTCATGCAGTTGAAAAGCCGTTTGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR-3UTR TCA 90 bp TTACTATCCAGAAGTTATAGCAGCCAACATAAAATGGAGTTCCTTGAAGAAAAGGACGAAACCAAGACATaGGGGGTGAAGGGTTTCTGG +
Preference number: 2 (lower is better)
Translates to: LLSRSYSSQHKMEFLEEKDETKT*GVKGFW
Trigger: CCAGAAACCCTTCACCCCTCATGTCTTGGTTTCGTC...CTTTTCTTCAAGGAACTCCATTTTATGTTGGCTGCTATAACTTCTGGATAGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000115557.10
ENSMUST00000140668.8
3UTR-3UTR TCA 90 bp TTATCCATCACCTCACCTCGAGCCATCTCAGCAGCCCAAGTTCTTATTATTGATAAGAAATGGTTGCTATaGGTTTCTGTGGGAAGTCAT +
Preference number: 2 (lower is better)
Translates to: LSITSPRAISAAQVLIIDKKWLL*VSVGSH
Trigger: ATGACTTCCCACAGAAACTCATAGCAACCATTTCTT...ATCAATAATAAGAACTTGGGCTGCTGAGATGGCTCGAGGTGAGGTGATGGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp CTTCCCACATACTTTCTCCAAACCAAAGCTGGATTCTCATCATTTTCTACTTCAGGAACTCAGTTTTCCTaGTTTGGGGCATGCATCTTC +
Preference number: 2 (lower is better)
Translates to: LPTYFLQTKAGFSSFSTSGTQFS*FGACIF
Trigger: GAAGATGCATGCCCCAAATCAGGAAAACTGAGTTCC...TGAAGTAGAAAATGATGAGAATCCAGCTTTGGTTTGGAGAAAGTATGTGGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp TTATCCATCACCTCACCTCGAGCCATCTCAGCAGCCCAAGTTCTTATTATTGATGTTGTTTTATTTTTCTaGGTCAGGGTCTCACTACTC +
Preference number: 2 (lower is better)
Translates to: LSITSPRAISAAQVLIIDVVLFF*VRVSLL
Trigger: GAGTAGTGAGACCCTGACTCAGAAAAATAAAACAAC...ATCAATAATAAGAACTTGGGCTGCTGAGATGGCTCGAGGTGAGGTGATGGATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp GTTACAAGTGTCTGGCTAGTAGGGAAAATCTACTGTAGGCTTCCCTATATTCTCGGTTTGTCTCCTGTATaGATGGTTAGATGCTTACGT +
Preference number: 2 (lower is better)
Translates to: VTSVWLVGKIYCRLPYILGLSPV*MVRCLR
Trigger: ACGTAAGCATCTAACCATTCATACAGGAGACAAACC...GAGAATATAGGGAAGCCTACAGTAGATTTTCCCTACTAGCCAGACACTTGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR-3UTR GCA 90 bp CACAATAAATATCACTCAACAGGCCTTATTGCTGCCAGCACACATGGACAAAATACAGTTGGGGGCTGTTaGACATTCCTTGACTTCTTA +
Preference number: 2 (lower is better)
Translates to: HNKYHSTGLIAASTHGQNTVGGC*TFLDFL
Trigger: TAAGAAGTCAAGGAATGTGCAACAGCCCCCAACTGT...ATTTTGTCCATGTGTGCTGGCAGCAATAAGGCCTGTTGAGTGATATTTATTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000115557.10
ENSMUST00000140668.8
3UTR-3UTR GCA 90 bp CACAATGGAATCTTTATCAGTCTTAAAGAAAGATGGCCAGGAGATGGCTCAGTGTCAAAGCATGCACCATaGCCAGCCTGTATTTGTTTT +
Preference number: 2 (lower is better)
Translates to: HNGIFISLKERWPGDGSVSKHAP*PACICF
Trigger: AAAACAAATACAGGCTGGGCATGGTGCATGCTTTGA...CACTGAGCCATCTCCTGGCCATCTTTCTTTAAGACTGATAAAGATTCCATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR GCA 90 bp GTTACAAGTGTCTGGCTAGTAGGGAAAATCTACTGTAGGCTTCCCTATATTCTCTGGAGATCTTCTCTGTaGAAATCCTCTTCTTCCAAC +
Preference number: 2 (lower is better)
Translates to: VTSVWLVGKIYCRLPYILWRSSL*KSSSSN
Trigger: GTTGGAAGAAGAGGATTTGCACAGAGAAGATCTCCA...GAGAATATAGGGAAGCCTACAGTAGATTTTCCCTACTAGCCAGACACTTGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR-3UTR CCA 90 bp CACAATAAATATCACTCAACAGGCCTTATTGCTGCCAGCACACATGGACAAAATAGTTCGTGTGCACTGTaGCTTCTGCCTGTTTGTATT +
Preference number: 2 (lower is better)
Translates to: HNKYHSTGLIAASTHGQNSSCAL*LLPVCI
Trigger: AATACAAACAGGCAGAAGCCACAGTGCACACGAACT...ATTTTGTCCATGTGTGCTGGCAGCAATAAGGCCTGTTGAGTGATATTTATTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR-3UTR CCA 90 bp GCGAAAGTTCACAATAAATATCACTCAACAGGCCTTATTGCTGCCAGCACACATATGGGTACGTTTTTATaGTGTGCACTTGAGCAGACA +
Preference number: 2 (lower is better)
Translates to: AKVHNKYHSTGLIAASTHMGTFL*CALEQT
Trigger: TGTCTGCTCAAGTGCACACCATAAAAACGTACCCAT...ATGTGTGCTGGCAGCAATAAGGCCTGTTGAGTGATATTTATTGTGAACTTTCGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR-3UTR TCA 90 bp TACTCACTTAGCTTTGACCACCTCGATGTAATGTGCTGGGTGTTCATTTTGGTCTCTCTTTTTACCATGTaGGTCTCAGAGACTAAATTC +
Preference number: 2 (lower is better)
Translates to: YSLSFDHLDVMCWVFILVSLFTM*VSETKF
Trigger: GAATTTAGTCTCTGAGACTCACATGGTAAAAAGAGA...GACCAAAATGAACACCCAGCACATTACATCGAGGTGGTCAAAGCTAAGTGAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp ACAAGTGTCTGGCTAGTAGGGAAAATCTACTGTAGGCTTCCCTATATTCTCAACTGGATTTTTACGTGGTaGATGAGGTTAGATGAGGAA +
Preference number: 2 (lower is better)
Translates to: TSVWLVGKIYCRLPYILNWIFTW*MRLDEE
Trigger: TTCCTCATCTAACCTCATTCACCACGTAAAAATCCA...GTTGAGAATATAGGGAAGCCTACAGTAGATTTTCCCTACTAGCCAGACACTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR-3UTR GCA 90 bp ATTCAAACGGCTTTTCAACTGCATGAGTTTTTAAGTGGTCGTGTAGCAGATTGTACAGTTGGGGGCTGTTaGACATTCCTTGACTTCTTA +
Preference number: 2 (lower is better)
Translates to: IQTAFQLHEFLSGRVADCTVGGC*TFLDFL
Trigger: TAAGAAGTCAAGGAATGTGCAACAGCCCCCAACTGT...ACAATCTGCTACACGACCACTTAAAAACTCATGCAGTTGAAAAGCCGTTTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR-3UTR GCA 90 bp TTATCCATCACCTCACCTCGAGCCATCTCAGCAGCCCAAGTTCTTATTATTGATTTCAATGCATCGTCATaGAAAATGAGATTTCAGCAC +
Preference number: 2 (lower is better)
Translates to: LSITSPRAISAAQVLIIDFNASS*KMRFQH
Trigger: GTGCTGAAATCTCATTTTGCATGACGATGCATTGAA...ATCAATAATAAGAACTTGGGCTGCTGAGATGGCTCGAGGTGAGGTGATGGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR GCA 90 bp GCGAAAGTTCACAATAAATATCACTCAACAGGCCTTATTGCTGCCAGCACACATATGTCCAGTGTTCCATaGACTATGAGTTTTCACATG +
Preference number: 2 (lower is better)
Translates to: AKVHNKYHSTGLIAASTHMSSVP*TMSFHM
Trigger: CATGTGAAAACTCATAGTGCATGGAACACTGGACAT...ATGTGTGCTGGCAGCAATAAGGCCTGTTGAGTGATATTTATTGTGAACTTTCGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR-3UTR CCA 90 bp GCAAGTAGTTCTGCATATGTGTGTCATGGCGCATGTCAACATTCACAAAATAAAGGGGTGAAGGGTTTCTaGTATTCTTCCTATCTGAAG +
Preference number: 2 (lower is better)
Translates to: ASSSAYVCHGACQHSQNKGVKGF*YSSYLK
Trigger: CTTCAGATAGGAAGAATACCAGAAACCCTTCACCCC...TTTATTTTGTGAATGTTGACATGCGCCATGACACACATATGCAGAACTACTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp TACTCACTTAGCTTTGACCACCTCGATGTAATGTGCTGGGTGTTCATTTTGGTCGGCTTTATTGGATTGTaGGCAACAAAAGTATTGAGT +
Preference number: 2 (lower is better)
Translates to: YSLSFDHLDVMCWVFILVGFIGL*ATKVLS
Trigger: ACTCAATACTTTTGTTGCCCACAATCCAATAAAGCC...GACCAAAATGAACACCCAGCACATTACATCGAGGTGGTCAAAGCTAAGTGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp GCGAAAGTTCACAATAAATATCACTCAACAGGCCTTATTGCTGCCAGCACACATATGGGTCTTGAAATATaGGTGCTCACTGAAAATTTC +
Preference number: 2 (lower is better)
Translates to: AKVHNKYHSTGLIAASTHMGLEI*VLTENF
Trigger: GAAATTTTCAGTGAGCACTCATATTTCAAGACCCAT...ATGTGTGCTGGCAGCAATAAGGCCTGTTGAGTGATATTTATTGTGAACTTTCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR-3UTR TCA 90 bp TTACTATCCAGAAGTTATAGCAGCCAACATAAAATGGAGTTCCTTGAAGAAAAGAGACACATCATGATCTaGGTGGGTGAGATGTCCAGT +
Preference number: 2 (lower is better)
Translates to: LLSRSYSSQHKMEFLEEKRHIMI*VGEMSS
Trigger: ACTGGACATCTCACCCACTCAGATCATGATGTGTCT...CTTTTCTTCAAGGAACTCCATTTTATGTTGGCTGCTATAACTTCTGGATAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR-3UTR GCA 90 bp TACTCACTTAGCTTTGACCACCTCGATGTAATGTGCTGGGTGTTCATTTTGGTCGAATCGTGCATCTGCTaGCTTCTACAAAATAAAAAT +
Preference number: 2 (lower is better)
Translates to: YSLSFDHLDVMCWVFILVESCIC*LLQNKN
Trigger: ATTTTTATTTTGTAGAAGGCAGCAGATGCACGATTC...GACCAAAATGAACACCCAGCACATTACATCGAGGTGGTCAAAGCTAAGTGAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp GCAAGTAGTTCTGCATATGTGTGTCATGGCGCATGTCAACATTCACAAAATAAATGCTATGAGTTTCTGTaGGAAGTCATAATGGTGCCT +
Preference number: 2 (lower is better)
Translates to: ASSSAYVCHGACQHSQNKCYEFL*EVIMVP
Trigger: AGGCACCATTATGACTTCCCACAGAAACTCATAGCA...TTTATTTTGTGAATGTTGACATGCGCCATGACACACATATGCAGAACTACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp TACTCACTTAGCTTTGACCACCTCGATGTAATGTGCTGGGTGTTCATTTTGGTCATTAGTTTTCTCCTATaGAATCTCAATGGACACACA +
Preference number: 2 (lower is better)
Translates to: YSLSFDHLDVMCWVFILVISFLL*NLNGHT
Trigger: TGTGTGTCCATTGAGATTCCATAGGAGAAAACTAAT...GACCAAAATGAACACCCAGCACATTACATCGAGGTGGTCAAAGCTAAGTGAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp CACAATGGAATCTTTATCAGTCTTAAAGAAAGATGGCCAGGAGATGGCTCAGTGCATTTATTTAGTGTGTaGAGTGGATCAGTGTGTACA +
Preference number: 2 (lower is better)
Translates to: HNGIFISLKERWPGDGSVHLFSV*SGSVCT
Trigger: TGTACACACTGATCCACTCCACACACTAAATAAATG...CACTGAGCCATCTCCTGGCCATCTTTCTTTAAGACTGATAAAGATTCCATTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 90 bp AAAGCAAGATCCAGGTTAGCCAGGACTACACAGAGAAACCCTGTCTaGAAAAACAAACAAACAAACAAACAAACAAAAATTGTGTGCAGG +
Preference number: 2 (lower is better)
Translates to: KARSRLARTTQRNPV*KNKQTNKQTKIVCR
Trigger: CCTGCACACAATTTTTGTTTGTTTGTTTGTTTGTTTGTTTTTCAAGACAGGGTTTCTCTGTGTAGTCCTGGCTAACCTGGATCTTGCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp CACAATAAATATCACTCAACAGGCCTTATTGCTGCCAGCACACATGGACAAAATGGTTTTGTTCCGGTGTaGATACGAATGTGTTTATTA +
Preference number: 2 (lower is better)
Translates to: HNKYHSTGLIAASTHGQNGFVPV*IRMCLL
Trigger: TAATAAACACATTCGTATTCACACCGGAACAAAACC...ATTTTGTCCATGTGTGCTGGCAGCAATAAGGCCTGTTGAGTGATATTTATTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR-3UTR GCA 90 bp CACAATGGAATCTTTATCAGTCTTAAAGAAAGATGGCCAGGAGATGGCTCAGTGCAAACAAAAATTGTGTaGAGGTTTCAGATACTTCTC +
Preference number: 2 (lower is better)
Translates to: HNGIFISLKERWPGDGSVQTKIV*RFQILL
Trigger: GAGAAGTATCTGAAACCTGCACACAATTTTTGTTTG...CACTGAGCCATCTCCTGGCCATCTTTCTTTAAGACTGATAAAGATTCCATTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp ATTCAAACGGCTTTTCAACTGCATGAGTTTTTAAGTGGTCGTGTAGCAGATTGTTGCTGCCAGCACACATaGACAAAATTTCCATATAGT +
Preference number: 2 (lower is better)
Translates to: IQTAFQLHEFLSGRVADCCCQHT*TKFPYS
Trigger: ACTATATGGAAATTTTGTCCATGTGTGCTGGCAGCA...ACAATCTGCTACACGACCACTTAAAAACTCATGCAGTTGAAAAGCCGTTTGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR-3UTR CCA 90 bp TTACTATCCAGAAGTTATAGCAGCCAACATAAAATGGAGTTCCTTGAAGAAAAGATGTGTTTGTATGTGTaGGTACCCAGAGACCAGAAG +
Preference number: 2 (lower is better)
Translates to: LLSRSYSSQHKMEFLEEKMCLYV*VPRDQK
Trigger: CTTCTGGTCTCTGGGTACCCACACATACAAACACAT...CTTTTCTTCAAGGAACTCCATTTTATGTTGGCTGCTATAACTTCTGGATAGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp CACAATGGAATCTTTATCAGTCTTAAAGAAAGATGGCCAGGAGATGGCTCAGTGACAGAGTCAGATATTTaGTCAACCATATTCATTGCT +
Preference number: 2 (lower is better)
Translates to: HNGIFISLKERWPGDGSVTESDI*STIFIA
Trigger: AGCAATGAATATGGTTGACCAAATATCTGACTCTGT...CACTGAGCCATCTCCTGGCCATCTTTCTTTAAGACTGATAAAGATTCCATTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp GCAAGTAGTTCTGCATATGTGTGTCATGGCGCATGTCAACATTCACAAAATAAAGATGGCTTAACAATGTaGAACTTTATACAGAAGCTG +
Preference number: 2 (lower is better)
Translates to: ASSSAYVCHGACQHSQNKDGLTM*NFIQKL
Trigger: CAGCTTCTGTATAAAGTTTCACATTGTTAAGCCATC...TTTATTTTGTGAATGTTGACATGCGCCATGACACACATATGCAGAACTACTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR TCA 90 bp TTACTATCCAGAAGTTATAGCAGCCAACATAAAATGGAGTTCCTTGAAGAAAAGGTGAATGAGGTTAGATaGGGAAGTGAAGGTTTTCTC +
Preference number: 2 (lower is better)
Translates to: LLSRSYSSQHKMEFLEEKVNEVR*GSEGFL
Trigger: GAGAAAACCTTCACTTCCTCATCTAACCTCATTCAC...CTTTTCTTCAAGGAACTCCATTTTATGTTGGCTGCTATAACTTCTGGATAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR-3UTR CCA 90 bp GCAAGTAGTTCTGCATATGTGTGTCATGGCGCATGTCAACATTCACAAAATAAACTTTCCTTAAGTTCATaGGTCATTTTGAGTATGAGT +
Preference number: 2 (lower is better)
Translates to: ASSSAYVCHGACQHSQNKLSLSS*VILSMS
Trigger: ACTCATACTCAAAATGACCCATGAACTTAAGGAAAG...TTTATTTTGTGAATGTTGACATGCGCCATGACACACATATGCAGAACTACTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CCA 90 bp CTTCCCACATACTTTCTCCAAACCAAAGCTGGATTCTCATCATTTTCTACTTCAGTAACATTTCCACAATaGAATATTACTCAGCTGCTA +
Preference number: 2 (lower is better)
Translates to: LPTYFLQTKAGFSSFSTSVTFPQ*NITQLL
Trigger: TAGCAGCTGAGTAATATTCCATTGTGGAAATGTTAC...TGAAGTAGAAAATGATGAGAATCCAGCTTTGGTTTGGAGAAAGTATGTGGGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp CAGATGAAAGGGAACTTGCTGCTAAGCCAGACAGCCTaGGTTGGATCCCTGGGACTCATGGCCTGCTGCCGG +
Preference number: 3 (lower is better)
Translates to: QMKGNLLLSQTA*VGSLGLMACCR
Trigger: CCGGCAGCAGGCCATGAGTCCCAGGGATCCAACTCAGGCTGTCTGGCTTAGCAGCAAGTTCCCTTTCATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp ACGGAACTCAGGTTGTCAGGCCTAGTGGCAAGCACCCTTTTACCTACTGAGCTGGCCAAGGCCTTGTGCTaGCTAGAGGCCTCCAACCAC +
Preference number: 3 (lower is better)
Translates to: TELRLSGLVASTLLPTELAKALC*LEASNH
Trigger: GTGGTTGGAGGCCTCTAGCAAGCACAAGGCCTTGGC...CAGCTCAGTAGGTAAAAGGGTGCTTGCCACTAGGCCTGACAACCTGAGTTCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp CTCTCCACCGTATTCACAGAGGCGGGTCTCTCAGCTGCTCTTGCTAGCCAGATTCTAAGCCAGATGGGTTaGTCCCAGCAGTTAGTGGGG +
Preference number: 3 (lower is better)
Translates to: LSTVFTEAGLSAALASQILSQMG*SQQLVG
Trigger: CCCCACTAACTGCTGGGACAAACCCATCTGGCTTAG...AATCTGGCTAGCAAGAGCAGCTGAGAGACCCGCCTCTGTGAATACGGTGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp CCTTGGCCATCCTGGAACTCACACTATAGACCAGGCTaGCCTCAAACTCAAGAGATCTGCCTGCCTCTGCCT +
Preference number: 3 (lower is better)
Translates to: PWPSWNSHYRPG*PQTQEICLPLP
Trigger: AGGCAGAGGCAGGCAGATCTCTTGAGTTTGAGGCCAGCCTGGTCTATAGTGTGAGTTCCAGGATGGCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp TATGATGCACCATCCAGGTCTACCAGAGGCAAAACACAGGGACAGGAGGCTGGGACTCAACAGGCCTTATaGCTGCCAGCACACATGGAC +
Preference number: 3 (lower is better)
Translates to: YDAPSRSTRGKTQGQEAGTQQAL*LPAHMD
Trigger: GTCCATGTGTGCTGGCAGCAATAAGGCCTGTTGAGT...CCCAGCCTCCTGTCCCTGTGTTTTGCCTCTGGTAGACCTGGATGGTGCATCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 72 bp GGGACCCACATGGTGGAAGAAGGGAACAGATTCCAGTaGATGTCTCATCTCCTCTCCCACTCCCAACACACA +
Preference number: 3 (lower is better)
Translates to: GTHMVEEGNRFQ*MSHLLSHSQHT
Trigger: TGTGTGTTGGGAGTGGGAGAGGAGATGAGACATGCACTGGAATCTGTTCCCTTCTTCCACCATGTGGGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp GAGCCAGAGGGGTTAGGTATGGAGGAAGAGATTAGGTaGGGACAATGGGTCTCCCTGGGACAGGGAAATAGA +
Preference number: 3 (lower is better)
Translates to: EPEGLGMEEEIR*GQWVSLGQGNR
Trigger: TCTATTTCCCTGTCCCAGGGAGACCCATTGTCCCCACCTAATCTCTTCCTCCATACCTAACCCCTCTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp ACGGAACTCAGGTTGTCAGGCCTAGTGGCAAGCACCCTTTTACCTACTGAGCTGTGCCTCCACAGTAGCTaGGACTCTAGGTTTGTGCAG +
Preference number: 3 (lower is better)
Translates to: TELRLSGLVASTLLPTELCLHSS*DSRFVQ
Trigger: CTGCACAAACCTAGAGTCCAAGCTACTGTGGAGGCA...CAGCTCAGTAGGTAAAAGGGTGCTTGCCACTAGGCCTGACAACCTGAGTTCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp ATGTGTGGGTACCCAGAGACCAGAAGAGGAAGAGTCTaGCCTCCTGGAGTGTGTGTAAAGGCAGTTGTGAGC +
Preference number: 3 (lower is better)
Translates to: MCGYPETRRGRV*PPGVCVKAVVS
Trigger: GCTCACAACTGCCTTTACACACACTCCAGGAGGTCAGACTCTTCCTCTTCTGGTCTCTGGGTACCCACACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 72 bp CCTCTGCCTCCTGAGTACTGGGATCAATGTTGTGTGTaGAAACCATGTCCATCTGAGTACATGAGCTCCGGG +
Preference number: 3 (lower is better)
Translates to: PLPPEYWDQCCV*KPCPSEYMSSG
Trigger: CCCGGAGCTCATGTACTCAGATGGACATGGTTTGCACACACAACATTGATCCCAGTACTCAGGAGGCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 72 bp ATAGACCAGGCTGGCCTCAAACTCAAGAGATCTGCCTaGCTCTGCCTCCTGAGTACTGGGATCAATGTTGTG +
Preference number: 3 (lower is better)
Translates to: IDQAGLKLKRSA*LCLLSTGINVV
Trigger: CACAACATTGATCCCAGTACTCAGGAGGCAGAGGCAGGCAGATCTCTTGAGTTTGAGGCCAGCCTGGTCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp TGCCTGACACCCCGAGTTTTATCCTTGGGACCCACATaGTGGAAGAAGGGAACAGATTCCAGTGCATGTCTC +
Preference number: 3 (lower is better)
Translates to: CLTPRVLSLGPT*WKKGTDSSACL
Trigger: GAGACATGCACTGGAATCTGTTCCCTTCTTCCACCATGTGGGTCCCAAGGATAAAACTCGGGGTGTCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp GTACCCAGAGACCAGAAGAGGAAGAGTCTGACCTCCTaGAGTGTGTGTAAAGGCAGTTGTGAGCATCCCAGT +
Preference number: 3 (lower is better)
Translates to: VPRDQKRKSLTS*SVCKGSCEHPS
Trigger: ACTGGGATGCTCACAACTGCCTTTACACACACTCCAGGAGGTCAGACTCTTCCTCTTCTGGTCTCTGGGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp TGGAGGAAGAGATTAGGTGGGGACAATGGGTCTCCCTaGGACAGGGAAATAGAACAGATGGAGGAGAGAGGA +
Preference number: 3 (lower is better)
Translates to: WRKRLGGDNGSP*DREIEQMEERG
Trigger: TCCTCTCTCCTCCATCTGTTCTATTTCCCTGTCCCAGGGAGACCCATTGTCCCCACCTAATCTCTTCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp ACAAGTTTTGGGAGATGGTCCTCTCCTTTCACTGTGTaGGTTCCAGGGACGGAACTCAGGTTGTCAGGCCTA +
Preference number: 3 (lower is better)
Translates to: TSFGRWSSPFTV*VPGTELRLSGL
Trigger: TAGGCCTGACAACCTGAGTTCCGTCCCTGGAACCCACACAGTGAAAGGAGAGGACCATCTCCCAAAACTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp GGCCTAGTGGCAAGCACCCTTTTACCTACTGAGCTGTCACACCAGCCTGAGCACTTCCCCCTGAAGATATaGAAGAGACCAAGGAAAGAA +
Preference number: 3 (lower is better)
Translates to: GLVASTLLPTELSHQPEHFPLKI*KRPRKE
Trigger: TTCTTTCCTTGGTCTCTTCAATATCTTCAGGGGGAA...GTGCTCAGGCTGGTGTGACAGCTCAGTAGGTAAAAGGGTGCTTGCCACTAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp GGAGTGTGTGTAAAGGCAGTTGTGAGCATCCCAGTGTaGGTGCTGGGAACTAAACGCTGGTCCTCTCAAACA +
Preference number: 3 (lower is better)
Translates to: GVCVKAVVSIPV*VLGTKRWSSQT
Trigger: TGTTTGAGAGGACCAGCGTTTAGTTCCCAGCACTCACACTGGGATGCTCACAACTGCCTTTACACACACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp CTGGGATCAATGTTGTGTGTGCAAACCATGTCCATCTaGGTACATGAGCTCCGGGGCAGTTGGGACTACACA +
Preference number: 3 (lower is better)
Translates to: LGSMLCVQTMSI*VHELRGSWDYT
Trigger: TGTGTAGTCCCAACTGCCCCGGAGCTCATGTACTCAGATGGACATGGTTTGCACACACAACATTGATCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp ATCCCAGCACTAGGTAGGCAGAGACAAGTGGATCTCTaGGTTCAAGACCAGCCTGGTGTACAGAGTGAGTTC +
Preference number: 3 (lower is better)
Translates to: IPALGRQRQVDL*VQDQPGVQSEF
Trigger: GAACTCACTCTGTACACCAGGCTGGTCTTGAACTCAGAGATCCACTTGTCTCTGCCTACCTAGTGCTGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 72 bp GTGTCTTGTTCAGCCATCGTCAGAGAAGCTCCCTCCTaGAGTAGATGGGAACAAACACAAGGACCCACAACT +
Preference number: 3 (lower is better)
Translates to: VSCSAIVREAPS*SRWEQTQGPTT
Trigger: AGTTGTGGGTCCTTGTGTTTGTTCCCATCTACTGCAGGAGGGAGCTTCTCTGACGATGGCTGAACAAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 72 bp GACCCAGCTGATCTTGAAATCAAGAGATTTACCTGCTaGTGCCTCCCCAGTGCTGGGATTAAAGGCGTATGC +
Preference number: 3 (lower is better)
Translates to: DPADLEIKRFTC*CLPSAGIKGVC
Trigger: GCATACGCCTTTAATCCCAGCACTGGGGAGGCAGCAGCAGGTAAATCTCTTGATTTCAAGATCAGCTGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp CTGACACCCCGAGTTTTATCCTTGGGACCCACATGGTaGAAGAAGGGAACAGATTCCAGTGCATGTCTCATC +
Preference number: 3 (lower is better)
Translates to: LTPRVLSLGPTW*KKGTDSSACLI
Trigger: GATGAGACATGCACTGGAATCTGTTCCCTTCTTCCACCATGTGGGTCCCAAGGATAAAACTCGGGGTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp GGGTTAGGTATGGAGGAAGAGATTAGGTGGGGACAATaGGTCTCCCTGGGACAGGGAAATAGAACAGATGGA +
Preference number: 3 (lower is better)
Translates to: GLGMEEEIRWGQ*VSLGQGNRTDG
Trigger: TCCATCTGTTCTATTTCCCTGTCCCAGGGAGACCCATTGTCCCCACCTAATCTCTTCCTCCATACCTAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp CGGGTCTCTCAGCTGCTCTTGCTAGCCAGATTGCTTTaGAGATCCTGCCTTCGGAGTGTTGAAATTACACGT +
Preference number: 3 (lower is better)
Translates to: RVSQLLLLARLL*RSCLRSVEITR
Trigger: ACGTGTAATTTCAACACTCCGAAGGCAGGATCTCCAAAGCAATCTGGCTAGCAAGAGCAGCTGAGAGACCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp GCATGTATGCTGAGGCTCTGTTATAGTGTGTGCTCATaGCGGTGCATGCCTTTAATCCCAGCATTCGAGAGG +
Preference number: 3 (lower is better)
Translates to: ACMLRLCYSVCS*RCMPLIPAFER
Trigger: CCTCTCGAATGCTGGGATTAAAGGCATGCACCGCCATGAGCACACACTATAACAGAGCCTCAGCATACATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp CCATCTTGTGAGTTCCAGGAGTGGAACTCAGTTTTCCTGATTTGGGGCATGCATCAGATGAAAGGGAACTaGCTGCTAAGCCAGACAGCC +
Preference number: 3 (lower is better)
Translates to: PSCEFQEWNSVFLIWGMHQMKGN*LLSQTA
Trigger: GGCTGTCTGGCTTAGCAGCAAGTTCCCTTTCATCTG...ATGCATGCCCCAAATCAGGAAAACTGAGTTCCACTCCTGGAACTCACAAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp GTGTTTGAATGGGCATGTGGAGGTCCCAGGGCAGCATaGAGAGTCTTTTTCACTTCCTCTCCACCGTATTCA +
Preference number: 3 (lower is better)
Translates to: VFEWACGGPRAA*RVFFTSSPPYS
Trigger: TGAATACGGTGGAGAGGAAGTGAAAAAGACTCTTCATGCTGCCCTGGGACCTCCACATGCCCATTCAAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp GGTGTGGATGGGTGCATTCTTCTATTGCATGTATGCTaGGGCTCTGTTATAGTGTGTGCTCATGGCGGTGCA +
Preference number: 3 (lower is better)
Translates to: GVDGCILLLHVC*GSVIVCAHGGA
Trigger: TGCACCGCCATGAGCACACACTATAACAGAGCCTCAGCATACATGCAATAGAAGAATGCACCCATCCACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp ACCACATGGTGGCTCACAACCACCCATAATGAGATCTaGTGCCCTCTTCTGTTGTGTCTGAGGTCAGCTACT +
Preference number: 3 (lower is better)
Translates to: TTWWLTTTHNEI*CPLLLCLRSAT
Trigger: AGTAGCTGACCTCAGACACAACAGAAGAGGGCATCAGATCTCATTATGGGTGGTTGTGAGCCACCATGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 72 bp CCAGCTGATCTTGAAATCAAGAGATTTACCTGCTGCTaGCTCCCCAGTGCTGGGATTAAAGGCGTATGCCAT +
Preference number: 3 (lower is better)
Translates to: PADLEIKRFTCC*LPSAGIKGVCH
Trigger: ATGGCATACGCCTTTAATCCCAGCACTGGGGAGGCAGCAGCAGGTAAATCTCTTGATTTCAAGATCAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 72 bp GTAGACCCAGCTGATCTTGAAATCAAGAGATTTACCTaGTGCTGCCTCCCCAGTGCTGGGATTAAAGGCGTA +
Preference number: 3 (lower is better)
Translates to: VDPADLEIKRFT*CCLPSAGIKGV
Trigger: TACGCCTTTAATCCCAGCACTGGGGAGGCAGCAGCAGGTAAATCTCTTGATTTCAAGATCAGCTGGGTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 72 bp GGATCAGTGTGTACAGGTAGCTGTCAGAGGACAACTTaGTGGAGTTGGTTCTCTCCTTCCACTATGTGGGTT +
Preference number: 3 (lower is better)
Translates to: GSVCTGSCQRTT*WSWFSPSTMWV
Trigger: AACCCACATAGTGGAAGGAGAGAACCAACTCCAGCAAGTTGTCCTCTGACAGCTACCTGTACACACTGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp ACTCAAGAGATCTGCCTGCCTCTGCCTCCTGAGTACTaGGATCAATGTTGTGTGTGCAAACCATGTCCATCT +
Preference number: 3 (lower is better)
Translates to: TQEICLPLPPEY*DQCCVCKPCPS
Trigger: AGATGGACATGGTTTGCACACACAACATTGATCCCAGTACTCAGGAGGCAGAGGCAGGCAGATCTCTTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp AGAACGTCAAATGTAGGAGCTAGAGAGCTGGCTCAGTaGTTAAGAGCACTGACTACTTCCATAGCCCCATCC +
Preference number: 3 (lower is better)
Translates to: RTSNVGARELAQ*LRALTTSIAPS
Trigger: GGATGGGGCTATGGAAGTAGTCAGTGCTCTTAACCACTGAGCCAGCTCTCTAGCTCCTACATTTGACGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp ACTAGGTACGTCAGAGCTTCATTCCTGTGTAGGTTTTaGGCACTGCTGAAGATCAAAGCCAAGGCCTTGTGC +
Preference number: 3 (lower is better)
Translates to: TRYVRASFLCRF*ALLKIKAKALC
Trigger: GCACAAGGCCTTGGCTTTGATCTTCAGCAGTGCCCAAAACCTACACAGGAATGAAGCTCTGACGTACCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp TCAGTGTGTACAGGTAGCTGTCAGAGGACAACTTGCTaGAGTTGGTTCTCTCCTTCCACTATGTGGGTTCCT +
Preference number: 3 (lower is better)
Translates to: SVCTGSCQRTTC*SWFSPSTMWVP
Trigger: AGGAACCCACATAGTGGAAGGAGAGAACCAACTCCAGCAAGTTGTCCTCTGACAGCTACCTGTACACACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp TTATCCATCACCTCACCTCGAGCCATCTCAGCAGCCCAAGTTCTTATTATTGATCCCCGAGTTTTATCCTaGGGACCCACATGGTGGAAG +
Preference number: 3 (lower is better)
Translates to: LSITSPRAISAAQVLIIDPRVLS*GPTWWK
Trigger: CTTCCACCATGTGGGTCCCAAGGATAAAACTCGGGG...ATCAATAATAAGAACTTGGGCTGCTGAGATGGCTCGAGGTGAGGTGATGGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp AGTGTTGAAATTACACGTGGGCAGACATGCCCACGCCTCATTTACTTGGGTTCTCAAGTGCTTTATCCATaGAGCCATCTCCCACTCCCA +
Preference number: 3 (lower is better)
Translates to: SVEITRGQTCPRLIYLGSQVLYP*SHLPLP
Trigger: TGGGAGTGGGAGATGGCTCAATGGATAAAGCACTTG...AGAACCCAAGTAAATGAGGCGTGGGCATGTCTGCCCACGTGTAATTTCAACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp GGATCTCTGAGTTCAAGACCAGCCTGGTGTACAGAGTaGGTTCCAGGGCAGTCATGGCTACATAGAGAAATT +
Preference number: 3 (lower is better)
Translates to: GSLSSRPAWCTE*VPGQSWLHREI
Trigger: AATTTCTCTATGTAGCCATGACTGCCCTGGAACTCACTCTGTACACCAGGCTGGTCTTGAACTCAGAGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 72 bp CACATAAACTCAGACTATGACACCAATCACAGAGTCTaGACAGGTCTAAGCCAGATGGGTTTGTCCCAGCAG +
Preference number: 3 (lower is better)
Translates to: HINSDYDTNHRV*TGLSQMGLSQQ
Trigger: CTGCTGGGACAAACCCATCTGGCTTAGACCTGTGCAGACTCTGTGATTGGTGTCATAGTCTGAGTTTATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp AGTTGTTCTGAATATGAAAAGTATGGGTCAGTGAGCTaGCTCAGTGAGCTAAGGCTTGCCAAGACCTGCCTG +
Preference number: 3 (lower is better)
Translates to: SCSEYEKYGSVS*LSELRLAKTCL
Trigger: CAGGCAGGTCTTGGCAAGCCTTAGCTCACTGAGCCAGCTCACTGACCCATACTTTTCATATTCAGAACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp GATCATAAGGGAGCTGACAGTTTGGGTTCTCTTGCTTaGCTCAGTGCTGGCTTTATTGGATTGTGGGCAACA +
Preference number: 3 (lower is better)
Translates to: DHKGADSLGSLA*LSAGFIGLWAT
Trigger: TGTTGCCCACAATCCAATAAAGCCAGCACTGAGCCAAGCAAGAGAACCCAAACTGTCAGCTCCCTTATGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp GCTTTTGAGGTAGGATTTCTCCAGCCCTGGTTGGTCTaGAACTTACTACATGGACCTGCTCAAAACCTCTCA +
Preference number: 3 (lower is better)
Translates to: AFEVGFLQPWLV*NLLHGPAQNLS
Trigger: TGAGAGGTTTTGAGCAGGTCCATGTAGTAAGTTCCAGACCAACCAGGGCTGGAGAAATCCTACCTCAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp ACCATGGTGCTCATGTACAGGTTAGAAGACAAGTTTTaGGAGATGGTCCTCTCCTTTCACTGTGTGGGTTCC +
Preference number: 3 (lower is better)
Translates to: TMVLMYRLEDKF*EMVLSFHCVGS
Trigger: GGAACCCACACAGTGAAAGGAGAGGACCATCTCCCAAAACTTGTCTTCTAACCTGTACATGAGCACCATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp TGTACAGGTAGCTGTCAGAGGACAACTTGCTGGAGTTaGTTCTCTCCTTCCACTATGTGGGTTCCTGAGATT +
Preference number: 3 (lower is better)
Translates to: CTGSCQRTTCWS*FSPSTMWVPEI
Trigger: AATCTCAGGAACCCACATAGTGGAAGGAGAGAACCAACTCCAGCAAGTTGTCCTCTGACAGCTACCTGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp ACGGAACTCAGGTTGTCAGGCCTAGTGGCAAGCACCCTTTTACCTACTGAGCTGGGATGGGGTATAAAGTaGTGTTTCAGCACAGATTAT +
Preference number: 3 (lower is better)
Translates to: TELRLSGLVASTLLPTELGWGIK*CFSTDY
Trigger: ATAATCTGTGCTGAAACACAACTTTATACCCCATCC...CAGCTCAGTAGGTAAAAGGGTGCTTGCCACTAGGCCTGACAACCTGAGTTCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp TTATCCATCACCTCACCTCGAGCCATCTCAGCAGCCCAAGTTCTTATTATTGATAACACCCTCTTCTGGTaGGTCTCCATGAGAACCAGG +
Preference number: 3 (lower is better)
Translates to: LSITSPRAISAAQVLIIDNTLFW*VSMRTR
Trigger: CCTGGTTCTCATGGAGACCAACCAGAAGAGGGTGTT...ATCAATAATAAGAACTTGGGCTGCTGAGATGGCTCGAGGTGAGGTGATGGATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp AGAGTTCAGTGTAGGATGGGAGAGCTATCTAGATCTTaGGGGCTCCGGCTCTATCAAGGACTGATGCATTTA +
Preference number: 3 (lower is better)
Translates to: RVQCRMGELSRS*GLRLYQGLMHL
Trigger: TAAATGCATCAGTCCTTGATAGAGCCGGAGCCCTCAAGATCTAGATAGCTCTCCCATCCTACACTGAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp AATGTTGTGTGTGCAAACCATGTCCATCTGAGTACATaGGCTCCGGGGCAGTTGGGACTACACAATAAAACC +
Preference number: 3 (lower is better)
Translates to: NVVCANHVHLST*APGQLGLHNKT
Trigger: GGTTTTATTGTGTAGTCCCAACTGCCCCGGAGCTCATGTACTCAGATGGACATGGTTTGCACACACAACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp GCTCAGGTGGCCAAGAACTTGAGACTGGACAGGCCATaGACTTGGGGGAAAACTAAATACTATTGTTCTGCT +
Preference number: 3 (lower is better)
Translates to: AQVAKNLRLDRP*TWGKTKYYCSA
Trigger: AGCAGAACAATAGTATTTAGTTTTCCCCCAAGTTCATGGCCTGTCCAGTCTCAAGTTCTTGGCCACCTGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp CCACGGACATGTATGAAAGCACACCACGGACATGTATaGAAGCACACCACGGACATGTATGAAAACACCAAC +
Preference number: 3 (lower is better)
Translates to: PRTCMKAHHGHV*KHTTDMYENTN
Trigger: GTTGGTGTTTTCATACATGTCCGTGGTGTGCTTTCATACATGTCCGTGGTGTGCTTTCATACATGTCCGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp CCAGGGGATCCAACACCCTCTTCTGGTTGGTCTCCATaGGAACCAGGCATACACATGATACACAGATATATA +
Preference number: 3 (lower is better)
Translates to: PGDPTPSSGWSP*EPGIHMIHRYI
Trigger: TATATATCTGTGTATCATGTGTATGCCTGGTTCTCATGGAGACCAACCAGAAGAGGGTGTTGGATCCCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 72 bp AATTTCCCCACATTGTGTGTAGTAGCAGAGTTCGTGTaGACTGTGGCTTCTGCCTGTTTGTATTCCACTGGA +
Preference number: 3 (lower is better)
Translates to: NFPTLCVVAEFV*TVASACLYSTG
Trigger: TCCAGTGGAATACAAACAGGCAGAAGCCACAGTGCACACGAACTCTGCTACTACACACAATGTGGGGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR CCA 72 bp CAACATCTGACTGGAGTTAAGGTCTACTCCATGAGATaGAATTCATCCCTAGTACTGCTCAGGTGGCCAAGA +
Preference number: 3 (lower is better)
Translates to: QHLTGVKVYSMR*NSSLVLLRWPR
Trigger: TCTTGGCCACCTGAGCAGTACTAGGGATGAATTCCATCTCATGGAGTAGACCTTAACTCCAGTCAGATGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp ACGCCTCATTTACTTGGGTTCTGGAGATTCAGACTTTaGTCCCACACTGTGGGACAAGTGCTTTATCCATTG +
Preference number: 3 (lower is better)
Translates to: TPHLLGFWRFRL*SHTVGQVLYPL
Trigger: CAATGGATAAAGCACTTGTCCCACAGTGTGGGACCAAAGTCTGAATCTCCAGAACCCAAGTAAATGAGGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp CTGGACTCAAGTAATATTCCTGCCTCCACAGTAGCTTaGACTCTAGGTTTGTGCAGTGTGCTCAGTTTTGAG +
Preference number: 3 (lower is better)
Translates to: LDSSNIPASTVA*TLGLCSVLSFE
Trigger: CTCAAAACTGAGCACACTGCACAAACCTAGAGTCCAAGCTACTGTGGAGGCAGGAATATTACTTGAGTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp TCAGTCTTAAAGAAAGATGGCCAGGAGATGGCTCAGTaGGTAAAGGCACTTGCTGCCAATCAGATAGTGGAA +
Preference number: 3 (lower is better)
Translates to: SVLKKDGQEMAQ*VKALAANQIVE
Trigger: TTCCACTATCTGATTGGCAGCAAGTGCCTTTACCCACTGAGCCATCTCCTGGCCATCTTTCTTTAAGACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp TTATCCATCACCTCACCTCGAGCCATCTCAGCAGCCCAAGTTCTTATTATTGATGTACTGGGATCAATGTaGTGTGTGCAAACCATGTCC +
Preference number: 3 (lower is better)
Translates to: LSITSPRAISAAQVLIIDVLGSM*CVQTMS
Trigger: GGACATGGTTTGCACACACAACATTGATCCCAGTAC...ATCAATAATAAGAACTTGGGCTGCTGAGATGGCTCGAGGTGAGGTGATGGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp TTATCCATCACCTCACCTCGAGCCATCTCAGCAGCCCAAGTTCTTATTATTGATACAGCCACATGGAAATaGGTGTCAGTTCCTCAGGAA +
Preference number: 3 (lower is better)
Translates to: LSITSPRAISAAQVLIIDTATWK*VSVPQE
Trigger: TTCCTGAGGAACTGACACCAATTTCCATGTGGCTGT...ATCAATAATAAGAACTTGGGCTGCTGAGATGGCTCGAGGTGAGGTGATGGATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp AGTGTTGAAATTACACGTGGGCAGACATGCCCACGCCTCATTTACTTGGGTTCTTTCTGGTCAACAGGCTaGAAGACAAACACCTTTACA +
Preference number: 3 (lower is better)
Translates to: SVEITRGQTCPRLIYLGSFWSTG*KTNTFT
Trigger: TGTAAAGGTGTTTGTCTTCAAGCCTGTTGACCAGAA...AGAACCCAAGTAAATGAGGCGTGGGCATGTCTGCCCACGTGTAATTTCAACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp TTATCCATCACCTCACCTCGAGCCATCTCAGCAGCCCAAGTTCTTATTATTGATGTGGCAGGTGCATTATaGCCGTGGCAATTCTCTTTT +
Preference number: 3 (lower is better)
Translates to: LSITSPRAISAAQVLIIDVAGAL*PWQFSF
Trigger: AAAAGAGAATTGCCACGGCAATAATGCACCTGCCAC...ATCAATAATAAGAACTTGGGCTGCTGAGATGGCTCGAGGTGAGGTGATGGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp TACTCACTTAGCTTTGACCACCTCGATGTAATGTGCTGGGTGTTCATTTTGGTCTTTGGGTTCTCTTGCTaGGCTCAGTGCTGGCTTTAT +
Preference number: 3 (lower is better)
Translates to: YSLSFDHLDVMCWVFILVFGFSC*AQCWLY
Trigger: ATAAAGCCAGCACTGAGCCAAGCAAGAGAACCCAAA...GACCAAAATGAACACCCAGCACATTACATCGAGGTGGTCAAAGCTAAGTGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp TTATCCATCACCTCACCTCGAGCCATCTCAGCAGCCCAAGTTCTTATTATTGATGCACTGGCTGATTTTTaGAGATGGGATCTCACCATG +
Preference number: 3 (lower is better)
Translates to: LSITSPRAISAAQVLIIDALADF*RWDLTM
Trigger: CATGGTGAGATCCCATCTCAAAAAATCAGCCAGTGC...ATCAATAATAAGAACTTGGGCTGCTGAGATGGCTCGAGGTGAGGTGATGGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp CCACAGACATGTATGAAAACACACCACGGACATGTATaGAAGCACACCACGGACATGTATGAAAGCACACCA +
Preference number: 3 (lower is better)
Translates to: PQTCMKTHHGHV*KHTTDMYESTP
Trigger: TGGTGTGCTTTCATACATGTCCGTGGTGTGCTTTCATACATGTCCGTGGTGTGTTTTCATACATGTCTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp TTTTATGGTGTGCACTTGAGCAGACACATCATGATCTaGGTGGGTGAGATGTCCAGTGTTCCATGCACTATG +
Preference number: 3 (lower is better)
Translates to: FYGVHLSRHIMI*VGEMSSVPCTM
Trigger: CATAGTGCATGGAACACTGGACATCTCACCCACTCAGATCATGATGTGTCTGCTCAAGTGCACACCATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR CCA 72 bp ACCGTCACATGCAAACTTGTACAGCCACATGGAAATTaGTGTCAGTTCCTCAGGAAGCTGGGAATAAATCCA +
Preference number: 3 (lower is better)
Translates to: TVTCKLVQPHGN*CQFLRKLGINP
Trigger: TGGATTTATTCCCAGCTTCCTGAGGAACTGACACCAATTTCCATGTGGCTGTACAAGTTTGCATGTGACGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp TGCTGTTTCCACCTTGTAAGTCTTAAAGATCAAGCTTaGATAGTCAGGTTTGGTGACAAGCACCTTTCCCCG +
Preference number: 3 (lower is better)
Translates to: CCFHLVSLKDQA*IVRFGDKHLSP
Trigger: CGGGGAAAGGTGCTTGTCACCAAACCTGACTATCCAAGCTTGATCTTTAAGACTTACAAGGTGGAAACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp ATTTTTCTGAGTCAGGGTCTCACTACTCTGTATCTCTaGCTGTCTGGAACTCATTCTGTAGACCCAGCTGAT +
Preference number: 3 (lower is better)
Translates to: IFLSQGLTTLYL*LSGTHSVDPAD
Trigger: ATCAGCTGGGTCTACAGAATGAGTTCCAGACAGCCAGAGATACAGAGTAGTGAGACCCTGACTCAGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp ATTCAAACGGCTTTTCAACTGCATGAGTTTTTAAGTGGTCGTGTAGCAGATTGTACTCAACAGGCCTTATaGCTGCCAGCACACATGGAC +
Preference number: 3 (lower is better)
Translates to: IQTAFQLHEFLSGRVADCTQQAL*LPAHMD
Trigger: GTCCATGTGTGCTGGCAGCAATAAGGCCTGTTGAGT...ACAATCTGCTACACGACCACTTAAAAACTCATGCAGTTGAAAAGCCGTTTGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR-3UTR CAA 90 bp GCAAGTAGTTCTGCATATGTGTGTCATGGCGCATGTCAACATTCACAAAATAAACTGGAGATTCAGACTTaGGTCCCACACTGTGGGACA +
Preference number: 3 (lower is better)
Translates to: ASSSAYVCHGACQHSQNKLEIQT*VPHCGT
Trigger: TGTCCCACAGTGTGGGACCAAAGTCTGAATCTCCAG...TTTATTTTGTGAATGTTGACATGCGCCATGACACACATATGCAGAACTACTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp ACCACAGACATGTATGAAGCACACCACAGACATGTATaGAAACACACCACGGACATGTATGAAAGCACACCA +
Preference number: 3 (lower is better)
Translates to: TTDMYEAHHRHV*KHTTDMYESTP
Trigger: TGGTGTGCTTTCATACATGTCCGTGGTGTGTTTTCATACATGTCTGTGGTGTGCTTCATACATGTCTGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp ACACATACACATATGTATATGCTGACCTGGAATTTGTaGCTGACCTGCCTCAGCTTCCCAAGCACCAATACT +
Preference number: 3 (lower is better)
Translates to: THTHMYMLTWNL*LTCLSFPSTNT
Trigger: AGTATTGGTGCTTGGGAAGCTGAGGCAGGTCAGTCACAAATTCCAGGTCAGCATATACATATGTGTATGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp GAACCTCTGGTGTCAGTCTTAACCTTCCCTTTTATTTaGGACAGGATCTATTGGTGTTCACAGCTGGTATGC +
Preference number: 3 (lower is better)
Translates to: EPLVSVLTFPFI*DRIYWCSQLVC
Trigger: GCATACCAGCTGTGAACACCAATAGATCCTGTCTCAAATAAAAGGGAAGGTTAAGACTGACACCAGAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp TCTGAGTGGGTGAGATGTCCAGTGTTCCATGCACTATaGGTTTTCACATGGGTCTTGAAATATGAGTGCTCA +
Preference number: 3 (lower is better)
Translates to: SEWVRCPVFHAL*VFTWVLKYECS
Trigger: TGAGCACTCATATTTCAAGACCCATGTGAAAACTCATAGTGCATGGAACACTGGACATCTCACCCACTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR GCA 72 bp CATGGCCTGCTGCCGGCTGTCTTCTGCTATGAATCGTaGATCTGCTGCCTTCTACAAAATAAAAATGTAATA +
Preference number: 3 (lower is better)
Translates to: HGLLPAVFCYES*ICCLLQNKNVI
Trigger: TATTACATTTTTATTTTGTAGAAGGCAGCAGATGCACGATTCATAGCAGAAGACAGCCGGCAGCAGGCCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 72 bp ATTCCTGCCTCCACAGTAGCTTGGACTCTAGGTTTGTaGAGTGTGCTCAGTTTTGAGTGTATCAAAGCATTA +
Preference number: 3 (lower is better)
Translates to: IPASTVAWTLGL*SVLSFECIKAL
Trigger: TAATGCTTTGATACACTCAAAACTGAGCACACTGCACAAACCTAGAGTCCAAGCTACTGTGGAGGCAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 72 bp TGGATGGCTTGGAACTCACAGAGATCTACTTGCCTCTaGCTCCTAAATGCTAAGAAAGATTCAAAGCATGCA +
Preference number: 3 (lower is better)
Translates to: WMAWNSQRSTCL*LLNAKKDSKHA
Trigger: TGCATGCTTTGAATCTTTCTTAGCATTTAGGAGGCAGAGGCAAGTAGATCTCTGTGAGTTCCAAGCCATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp TTAAAACACCGTCACATGCAAACTTGTACAGCCACATaGAAATTGGTGTCAGTTCCTCAGGAAGCTGGGAAT +
Preference number: 3 (lower is better)
Translates to: LKHRHMQTCTAT*KLVSVPQEAGN
Trigger: ATTCCCAGCTTCCTGAGGAACTGACACCAATTTCCATGTGGCTGTACAAGTTTGCATGTGACGGTGTTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp TGTGAGTTCCAGGAGTGGAACTCAGTTTTCCTGATTTaGGGCATGCATCTTCAACCACTAAGCCATTATTTC +
Preference number: 3 (lower is better)
Translates to: CEFQEWNSVFLI*GMHLQPLSHYF
Trigger: GAAATAATGGCTTAGTGGTTGAAGATGCATGCCCCAAATCAGGAAAACTGAGTTCCACTCCTGGAACTCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp TTATGTTTTGCTTTTGAGGTAGGATTTCTCCAGCCCTaGTTGGTCTGGAACTTACTACATGGACCTGCTCAA +
Preference number: 3 (lower is better)
Translates to: LCFAFEVGFLQP*LVWNLLHGPAQ
Trigger: TTGAGCAGGTCCATGTAGTAAGTTCCAGACCAACCAGGGCTGGAGAAATCCTACCTCAAAAGCAAAACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp CAAGCACCTTTCCCCGCTGATTCATCTAACTTGCCCTaGAAGCGTTGTCTATTGCTTGTTTTATGGCTTTAT +
Preference number: 3 (lower is better)
Translates to: QAPFPADSSNLP*KRCLLLVLWLY
Trigger: ATAAAGCCATAAAACAAGCAATAGACAACGCTTCCAGGGCAAGTTAGATGAATCAGCGGGGAAAGGTGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp TCCTCTGCCACAGTATACTCTGTTAGACTTAGAGGATGGGGTATAAAGTTGTGTCCGTCACATGCAAACTaGTACAGCCACATGGAAATT +
Preference number: 3 (lower is better)
Translates to: SSATVYSVRLRGWGIKLCPSHAN*YSHMEI
Trigger: AATTTCCATGTGGCTGTACAAGTTTGCATGTGACGG...ACACAACTTTATACCCCATCCTCTAAGTCTAACAGAGTATACTGTGGCAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp GCATTATTGCCGTGGCAATTCTCTTTTACCATCTTGTaGGTTCCAGGAGTGGAACTCAGTTTTCCTGATTTG +
Preference number: 3 (lower is better)
Translates to: ALLPWQFSFTIL*VPGVELSFPDL
Trigger: CAAATCAGGAAAACTGAGTTCCACTCCTGGAACTCACAAGATGGTAAAAGAGAATTGCCACGGCAATAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp TCTCTTGCTTGGCTCAGTGCTGGCTTTATTGGATTGTaGGCAACAAAAGTATTGAGTAGTTATCTGACTGTG +
Preference number: 3 (lower is better)
Translates to: SLAWLSAGFIGL*ATKVLSSYLTV
Trigger: CACAGTCAGATAACTACTCAATACTTTTGTTGCCCACAATCCAATAAAGCCAGCACTGAGCCAAGCAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp TTTCACAATGGAATCTTTATCAGTCTTAAAGAAAGATaGCCAGGAGATGGCTCAGTGGGTAAAGGCACTTGC +
Preference number: 3 (lower is better)
Translates to: FHNGIFISLKER*PGDGSVGKGTC
Trigger: GCAAGTGCCTTTACCCACTGAGCCATCTCCTGGCCATCTTTCTTTAAGACTGATAAAGATTCCATTGTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp TACTCACTTAGCTTTGACCACCTCGATGTAATGTGCTGGGTGTTCATTTTGGTCTCCCTCTCCCTTTCTTaGATAGAGTTTCTCTGTATA +
Preference number: 3 (lower is better)
Translates to: YSLSFDHLDVMCWVFILVSLSLS*IEFLCI
Trigger: TATACAGAGAAACTCTATCAAAGAAAGGGAGAGGGA...GACCAAAATGAACACCCAGCACATTACATCGAGGTGGTCAAAGCTAAGTGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp TTATCCATCACCTCACCTCGAGCCATCTCAGCAGCCCAAGTTCTTATTATTGATGTGTTTCTATGGTACTaGTATGGAGTTCAGATGACA +
Preference number: 3 (lower is better)
Translates to: LSITSPRAISAAQVLIIDVFLWY*YGVQMT
Trigger: TGTCATCTGAACTCCATACAAGTACCATAGAAACAC...ATCAATAATAAGAACTTGGGCTGCTGAGATGGCTCGAGGTGAGGTGATGGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp ATCTGCTGCCTTCTACAAAATAAAAATGTAATAGTGTaGCAGCTGTACCCTAGGTACTTCCCAAAGCACAAC +
Preference number: 3 (lower is better)
Translates to: ICCLLQNKNVIV*QLYPRYFPKHN
Trigger: GTTGTGCTTTGGGAAGTACCTAGGGTACAGCTGCCACACTATTACATTTTTATTTTGTAGAAGGCAGCAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp TACTCACTTAGCTTTGACCACCTCGATGTAATGTGCTGGGTGTTCATTTTGGTCTTGCCTTACAGGTCTTaGCATTTATATTGGTTTCTG +
Preference number: 3 (lower is better)
Translates to: YSLSFDHLDVMCWVFILVLPYRS*HLYWFL
Trigger: CAGAAACCAATATAAATGCAAAGACCTGTAAGGCAA...GACCAAAATGAACACCCAGCACATTACATCGAGGTGGTCAAAGCTAAGTGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp TCCTCTGCCACAGTATACTCTGTTAGACTTAGAGGATGGGGTATAAAGTTGTGTTGGGCAACAAAAGTATaGAGTAGTTATCTGACTGTG +
Preference number: 3 (lower is better)
Translates to: SSATVYSVRLRGWGIKLCWATKV*SSYLTV
Trigger: CACAGTCAGATAACTACTCAATACTTTTGTTGCCCA...ACACAACTTTATACCCCATCCTCTAAGTCTAACAGAGTATACTGTGGCAGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp CACAATGGAATCTTTATCAGTCTTAAAGAAAGATGGCCAGGAGATGGCTCAGTGATGCCCAGCCTGTATTaGTTTTTAAAGATGGAGGAA +
Preference number: 3 (lower is better)
Translates to: HNGIFISLKERWPGDGSVMPSLY*FLKMEE
Trigger: TTCCTCCATCTTTAAAAACAAATACAGGCTGGGCAT...CACTGAGCCATCTCCTGGCCATCTTTCTTTAAGACTGATAAAGATTCCATTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp CTTCCCACATACTTTCTCCAAACCAAAGCTGGATTCTCATCATTTTCTACTTCAGCTGGCTTTATTGGATaGTGGGCAACAAAAGTATTG +
Preference number: 3 (lower is better)
Translates to: LPTYFLQTKAGFSSFSTSAGFIG*WATKVL
Trigger: CAATACTTTTGTTGCCCACAATCCAATAAAGCCAGC...TGAAGTAGAAAATGATGAGAATCCAGCTTTGGTTTGGAGAAAGTATGTGGGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp CACAATGGAATCTTTATCAGTCTTAAAGAAAGATGGCCAGGAGATGGCTCAGTGTGGAAGCGTTGTCTATaGCTTGTTTTATGGCTTTAT +
Preference number: 3 (lower is better)
Translates to: HNGIFISLKERWPGDGSVWKRCL*LVLWLY
Trigger: ATAAAGCCATAAAACAAGCAATAGACAACGCTTCCA...CACTGAGCCATCTCCTGGCCATCTTTCTTTAAGACTGATAAAGATTCCATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp ATTCAAACGGCTTTTCAACTGCATGAGTTTTTAAGTGGTCGTGTAGCAGATTGTGTTTTCACATGGGTCTaGAAATATGAGTGCTCACTG +
Preference number: 3 (lower is better)
Translates to: IQTAFQLHEFLSGRVADCVFTWV*KYECSL
Trigger: CAGTGAGCACTCATATTTCAAGACCCATGTGAAAAC...ACAATCTGCTACACGACCACTTAAAAACTCATGCAGTTGAAAAGCCGTTTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR-3UTR CAA 90 bp CACAATAAATATCACTCAACAGGCCTTATTGCTGCCAGCACACATGGACAAAATCATGTCTACGTAGATTaGAGTAAGAATGGAAGGCTT +
Preference number: 3 (lower is better)
Translates to: HNKYHSTGLIAASTHGQNHVYVD*SKNGRL
Trigger: AAGCCTTCCATTCTTACTCAAATCTACGTAGACATG...ATTTTGTCCATGTGTGCTGGCAGCAATAAGGCCTGTTGAGTGATATTTATTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
3UTR TCA 72 bp CATACATGTAATTATGGCTGGGTTGTTTTATTTTTCTaGGTCAGGGTCTCACTACTCTGTATCTCTGGCTGT +
Preference number: 3 (lower is better)
Translates to: HTCNYGWVVLFF*VRVSLLCISGC
Trigger: ACAGCCAGAGATACAGAGTAGTGAGACCCTGACTCAGAAAAATAAAACAACCCAGCCATAATTACATGTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 72 bp TGTATGAGTAGTCTTAAACATACATGCATGCATGCATaGGATGCCAGTTTCCATGTAGAGTTCAGAGAACAA +
Preference number: 3 (lower is better)
Translates to: CMSSLKHTCMHA*DASFHVEFREQ
Trigger: TTGTTCTCTGAACTCTACATGGAAACTGGCATCGCATGCATGCATGCATGTATGTTTAAGACTACTCATACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 72 bp TATAGGCTTTGTTGTATGAGTAGTCTTAAACATACATaGATGCATGCATGCGATGCCAGTTTCCATGTAGAG +
Preference number: 3 (lower is better)
Translates to: YRLCCMSSLKHT*MHACDASFHVE
Trigger: CTCTACATGGAAACTGGCATCGCATGCATGCATGCATGTATGTTTAAGACTACTCATACAACAAAGCCTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 72 bp TCTTTAAATTCGTGTGTGTATGTGTGTGCGCATGAGTaGATATTTACCATGGTGCTCATGTACAGGTTAGAA +
Preference number: 3 (lower is better)
Translates to: SLNSCVYVCAHE*IFTMVLMYRLE
Trigger: TTCTAACCTGTACATGAGCACCATGGTAAATATGCACTCATGCGCACACACATACACACACGAATTTAAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp CATATGTGTTATGGGTTCCCAGCAAAGGATAGGGTTTaGGACTCTGTATTCGTTGTCTTTTTCCTGTTAAAA +
Preference number: 3 (lower is better)
Translates to: HMCYGFPAKDRV*DSVFVVFFLLK
Trigger: TTTTAACAGGAAAAAGACAACGAATACAGAGTCCCAAACCCTATCCTTTGCTGGGAACCCATAACACATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp CAAGTTCTTATTATTGATAATTTGAGTGGGTGTGGATaGGTGCATTCTTCTATTGCATGTATGCTGAGGCTC +
Preference number: 3 (lower is better)
Translates to: QVLIIDNLSGCG*VHSSIACMLRL
Trigger: GAGCCTCAGCATACATGCAATAGAAGAATGCACCCATCCACACCCACTCAAATTATCAATAATAAGAACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp GCAAGTAGTTCTGCATATGTGTGTCATGGCGCATGTCAACATTCACAAAATAAACTTATTATTGATAATTaGAGTGGGTGTGGATGGGTG +
Preference number: 3 (lower is better)
Translates to: ASSSAYVCHGACQHSQNKLIIDN*SGCGWV
Trigger: CACCCATCCACACCCACTCAAATTATCAATAATAAG...TTTATTTTGTGAATGTTGACATGCGCCATGACACACATATGCAGAACTACTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp AACAGGAACATTTTAATGACGGTGAGGACTATATCATaGAACTCAGCTGCTGTAAGCTACTATAGGGTAGAA +
Preference number: 3 (lower is better)
Translates to: NRNILMTVRTIS*NSAAVSYYRVE
Trigger: TTCTACCCTATAGTAGCTTACAGCAGCTGAGTTTCATGATATAGTCCTCACCGTCATTAAAATGTTCCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 72 bp CCTCTTGGGAATTTACCAAAAGGACACTACACTGTATaGTACAGAGTCAGATATTTGGTCAACCATATTCAT +
Preference number: 3 (lower is better)
Translates to: PLGNLPKGHYTV*YRVRYLVNHIH
Trigger: ATGAATATGGTTGACCAAATATCTGACTCTGTAGCATACAGTGTAGTGTCCTTTTGGTAAATTCCCAAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR GCA 72 bp ACATACTCACTTAGCTTTGACCACCTCGATGTAATGTaGTGGGTGTTCATTTTGGTCACTTCAAAGTATTTT +
Preference number: 3 (lower is better)
Translates to: TYSLSFDHLDVM*WVFILVTSKYF
Trigger: AAAATACTTTGAAGTGACCAAAATGAACACCCAGCACATTACATCGAGGTGGTCAAAGCTAAGTGAGTATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp TCCTCTGCCACAGTATACTCTGTTAGACTTAGAGGATaGGGTATAAAGTTGTGTTTCAGCACAGATTATAAA +
Preference number: 3 (lower is better)
Translates to: SSATVYSVRLRG*GIKLCFSTDYK
Trigger: TTTATAATCTGTGCTGAAACACAACTTTATACCCCATCCTCTAAGTCTAACAGAGTATACTGTGGCAGAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp TTACTATCCAGAAGTTATAGCAGCCAACATAAAATGGAGTTCCTTGAAGAAAAGAGAAGCCAGGAGGGGTaGTACTATGATTTATATCTG +
Preference number: 3 (lower is better)
Translates to: LLSRSYSSQHKMEFLEEKRSQEG*YYDLYL
Trigger: CAGATATAAATCATAGTACAACCCCTCCTGGCTTCT...CTTTTCTTCAAGGAACTCCATTTTATGTTGGCTGCTATAACTTCTGGATAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp CTTCCCACATACTTTCTCCAAACCAAAGCTGGATTCTCATCATTTTCTACTTCATCATTATTTATGTGTTaGTATGTGTGGGTACCCAGA +
Preference number: 3 (lower is better)
Translates to: LPTYFLQTKAGFSSFSTSSLFMC*YVWVPR
Trigger: TCTGGGTACCCACACATACAAACACATAAATAATGA...TGAAGTAGAAAATGATGAGAATCCAGCTTTGGTTTGGAGAAAGTATGTGGGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR-3UTR CAA 90 bp GCAAGTAGTTCTGCATATGTGTGTCATGGCGCATGTCAACATTCACAAAATAAATTTCTTCTAAGTGTTTaGGGTTTAGCTTCTAGTTCC +
Preference number: 3 (lower is better)
Translates to: ASSSAYVCHGACQHSQNKFLLSV*GLASSS
Trigger: GGAACTAGAAGCTAAACCCAAAACACTTAGAAGAAA...TTTATTTTGTGAATGTTGACATGCGCCATGACACACATATGCAGAACTACTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp TGTGAGTCTCAGAGACTAAATTCTGGTCAACAGGCTTaGAGACAAACACCTTTACATTTAAGGATATTGAGA +
Preference number: 3 (lower is better)
Translates to: CESQRLNSGQQA*RQTPLHLRILR
Trigger: TCTCAATATCCTTAAATGTAAAGGTGTTTGTCTTCAAGCCTGTTGACCAGAATTTAGTCTCTGAGACTCACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp TACTCACTTAGCTTTGACCACCTCGATGTAATGTGCTaGGTGTTCATTTTGGTCACTTCAAAGTATTTTTAT +
Preference number: 3 (lower is better)
Translates to: YSLSFDHLDVMC*VFILVTSKYFY
Trigger: ATAAAAATACTTTGAAGTGACCAAAATGAACACCCAGCACATTACATCGAGGTGGTCAAAGCTAAGTGAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR TCA 72 bp GTGATGTCTCTATTTCTCTTCAGTTTTGATCTAGATTaGTTAAGAACATGGAACATATGTGTTATGGGTTCC +
Preference number: 3 (lower is better)
Translates to: VMSLFLFSFDLD*LRTWNICVMGS
Trigger: GGAACCCATAACACATATGTTCCATGTTCTTAATCAATCTAGATCAAAACTGAAGAGAAATAGAGACATCAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CCA 72 bp AAGGACACTACACTGTATGCTACAGAGTCAGATATTTaGTCAACCATATTCATTGCTGCTCTATTTATAATA +
Preference number: 3 (lower is better)
Translates to: KDTTLYATESDI*STIFIAALFII
Trigger: TATTATAAATAGAGCAGCAATGAATATGGTTGACCAAATATCTGACTCTGTAGCATACAGTGTAGTGTCCTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
CDS-3UTR CCA 90 bp GGCCTAGTGGCAAGCACCCTTTTACCTACTGAGCTGTCACACCAGCCTGAGCACCTCTTGGGTGCCAAGTaGCATTTCCCATTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: GLVASTLLPTELSHQPEHLLGAK*HFPFLE
Trigger: CTCCAAGAATGGGAAATGCCACTTGGCACCCAAGAG...GTGCTCAGGCTGGTGTGACAGCTCAGTAGGTAAAAGGGTGCTTGCCACTAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 72 bp CAGAGGCGGGTCTCTCAGCTGCTCTTGCTAGCCAGATaGCTTTGGAGATCCTGCCTTCGGAGTGTTGAAATT +
Preference number: 4 (lower is better)
Translates to: QRRVSQLLLLAR*LWRSCLRSVEI
Trigger: AATTTCAACACTCCGAAGGCAGGATCTCCAAAGCAATCTGGCTAGCAAGAGCAGCTGAGAGACCCGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
CDS-3UTR TCA 90 bp ACGGAACTCAGGTTGTCAGGCCTAGTGGCAAGCACCCTTTTACCTACTGAGCTGAGACACATCATGATCTaGGTGGGTGAGATGTCCAGT +
Preference number: 4 (lower is better)
Translates to: TELRLSGLVASTLLPTELRHIMI*VGEMSS
Trigger: ACTGGACATCTCACCCACTCAGATCATGATGTGTCT...CAGCTCAGTAGGTAAAAGGGTGCTTGCCACTAGGCCTGACAACCTGAGTTCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
CDS-3UTR TCA 90 bp TTACACGTGGGCAGACATGCCCACGCCTCATTTACTTGGGTTCTGGAGATTCAGGGTCTCTCTCCACTGTaGGTTCTTCCTACATGGTTC +
Preference number: 4 (lower is better)
Translates to: LHVGRHAHASFTWVLEIQGLSPL*VLPTWF
Trigger: GAACCATGTAGGAAGAACTCACAGTGGAGAGAGACC...CTGAATCTCCAGAACCCAAGTAAATGAGGCGTGGGCATGTCTGCCCACGTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 72 bp ATTACACGTGGGCAGACATGCCCACGCCTCATTTACTaGGGTTCTGGAGATTCAGACTTTGGTCCCACACTG +
Preference number: 4 (lower is better)
Translates to: ITRGQTCPRLIY*GSGDSDFGPTL
Trigger: CAGTGTGGGACCAAAGTCTGAATCTCCAGAACCCAAGTAAATGAGGCGTGGGCATGTCTGCCCACGTGTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
CDS-3UTR TCA 90 bp TATGATGCACCATCCAGGTCTACCAGAGGCAAAACACAGGGACAGGAGGCTGGGGGTTTGTCTCCTGTATaGATGGTTAGATGCTTACGT +
Preference number: 4 (lower is better)
Translates to: YDAPSRSTRGKTQGQEAGGLSPV*MVRCLR
Trigger: ACGTAAGCATCTAACCATTCATACAGGAGACAAACC...CCCAGCCTCCTGTCCCTGTGTTTTGCCTCTGGTAGACCTGGATGGTGCATCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
CDS-3UTR CCA 90 bp CTCTCCACCGTATTCACAGAGGCGGGTCTCTCAGCTGCTCTTGCTAGCCAGATTATGGGTACGTTTTTATaGTGTGCACTTGAGCAGACA +
Preference number: 4 (lower is better)
Translates to: LSTVFTEAGLSAALASQIMGTFL*CALEQT
Trigger: TGTCTGCTCAAGTGCACACCATAAAAACGTACCCAT...AATCTGGCTAGCAAGAGCAGCTGAGAGACCCGCCTCTGTGAATACGGTGGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 72 bp AGAGCACTGACTACTTCCATAGCCCCATCCCCAAGTTaGATTCCCAGAACTCACATGGTGGCTCACAAGCAT +
Preference number: 4 (lower is better)
Translates to: RALTTSIAPSPS*IPRTHMVAHKH
Trigger: ATGCTTGTGAGCCACCATGTGAGTTCTGGGAATCAAACTTGGGGATGGGGCTATGGAAGTAGTCAGTGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
CDS-3UTR GCA 90 bp CTCTCCACCGTATTCACAGAGGCGGGTCTCTCAGCTGCTCTTGCTAGCCAGATTATGTCCAGTGTTCCATaGACTATGAGTTTTCACATG +
Preference number: 4 (lower is better)
Translates to: LSTVFTEAGLSAALASQIMSSVP*TMSFHM
Trigger: CATGTGAAAACTCATAGTGCATGGAACACTGGACAT...AATCTGGCTAGCAAGAGCAGCTGAGAGACCCGCCTCTGTGAATACGGTGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 72 bp ACCCACAACTGTACAATATGCAGAGAGGGAGAGACCTaGGAACGCTCTGTCGTAAACAAATTCCCCCTGAAG +
Preference number: 4 (lower is better)
Translates to: THNCTICREGET*ERSVVNKFPLK
Trigger: CTTCAGGGGGAATTTGTTTACGACAGAGCGTTCCAAGGTCTCTCCCTCTCTGCATATTGTACAGTTGTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 72 bp AAAGGGATCATAAGGGAGCTGACAGTTTGGGTTCTCTaGCTTGGCTCAGTGCTGGCTTTATTGGATTGTGGG +
Preference number: 4 (lower is better)
Translates to: KGIIRELTVWVL*LGSVLALLDCG
Trigger: CCCACAATCCAATAAAGCCAGCACTGAGCCAAGCAAGAGAACCCAAACTGTCAGCTCCCTTATGATCCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
CDS-3UTR TCA 90 bp CACAATGGAATCTTTATCAGTCTTAAAGAAAGATGGCCAGGAGATGGCTCAGTGGACCTCACATCCTGCTaGGGCCAGGTTCTGGTAGTT +
Preference number: 4 (lower is better)
Translates to: HNGIFISLKERWPGDGSVDLTSC*GQVLVV
Trigger: AACTACCAGAACCTGGCCTCAGCAGGATGTGAGGTC...CACTGAGCCATCTCCTGGCCATCTTTCTTTAAGACTGATAAAGATTCCATTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
CDS-3UTR TCA 90 bp TACTCACTTAGCTTTGACCACCTCGATGTAATGTGCTGGGTGTTCATTTTGGTCGGTCTCTCTCCACTGTaGGTTCTTAAGTGTCTACGC +
Preference number: 4 (lower is better)
Translates to: YSLSFDHLDVMCWVFILVGLSPL*VLKCLR
Trigger: GCGTAGACACTTAAGAACTCACAGTGGAGAGAGACC...GACCAAAATGAACACCCAGCACATTACATCGAGGTGGTCAAAGCTAAGTGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 72 bp CACCGTCACATGCAAACTTGTACAGCCACATGGAAATaGGTGTCAGTTCCTCAGGAAGCTGGGAATAAATCC +
Preference number: 4 (lower is better)
Translates to: HRHMQTCTATWK*VSVPQEAGNKS
Trigger: GGATTTATTCCCAGCTTCCTGAGGAACTGACACCAATTTCCATGTGGCTGTACAAGTTTGCATGTGACGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 72 bp CACGCCTCATTTACTTGGGTTCTGGAGATTCAGACTTaGGTCCCACACTGTGGGACAAGTGCTTTATCCATT +
Preference number: 4 (lower is better)
Translates to: HASFTWVLEIQT*VPHCGTSALSI
Trigger: AATGGATAAAGCACTTGTCCCACAGTGTGGGACCAAAGTCTGAATCTCCAGAACCCAAGTAAATGAGGCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 72 bp TTCCTTCCTTTTAGATACAAGGTAGTCCTGGATGGCTaGGAACTCACAGAGATCTACTTGCCTCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: FLPFRYKVVLDG*ELTEIYLPLPP
Trigger: AGGAGGCAGAGGCAAGTAGATCTCTGTGAGTTCCAAGCCATCCAGGACTACCTTGTATCTAAAAGGAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 72 bp TACCATGGTGCTCATGTACAGGTTAGAAGACAAGTTTaGGGAGATGGTCCTCTCCTTTCACTGTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: YHGAHVQVRRQV*GDGPLLSLCGF
Trigger: GAACCCACACAGTGAAAGGAGAGGACCATCTCCCAAAACTTGTCTTCTAACCTGTACATGAGCACCATGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 72 bp GGTAGGGGAGCACATATGTGGAAATCAGAGGACTACTaGACAATGCTGGTGCTCTCTTTTTACCATGTGAGT +
Preference number: 4 (lower is better)
Translates to: GRGAHMWKSEDY*TMLVLSFYHVS
Trigger: ACTCACATGGTAAAAAGAGAGCACCAGCATTGTCAAGTAGTCCTCTGATTTCCACATATGTGCTCCCCTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 72 bp GGAATAAATCCACCTCAAGACTCAGCCTTACCCCTCTaGGGAATTTACCAAAAGGACACTACACTGTATGCT +
Preference number: 4 (lower is better)
Translates to: GINPPQDSALPL*GIYQKDTTLYA
Trigger: AGCATACAGTGTAGTGTCCTTTTGGTAAATTCCCAAGAGGGGTAAGGCTGAGTCTTGAGGTGGATTTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 72 bp AATATTCCTGCCTCCACAGTAGCTTGGACTCTAGGTTaGTGCAGTGTGCTCAGTTTTGAGTGTATCAAAGCA +
Preference number: 4 (lower is better)
Translates to: NIPASTVAWTLG*CSVLSFECIKA
Trigger: TGCTTTGATACACTCAAAACTGAGCACACTGCACAAACCTAGAGTCCAAGCTACTGTGGAGGCAGGAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
CDS-3UTR GCA 90 bp CCCAAAGGAAAAATTAGTTTTCTCCTATGGAATCTCAATGGACACACAAACCACGTGCACTGTGGCTTCTaGCTGTTTGTATTCCACTGG +
Preference number: 4 (lower is better)
Translates to: PKGKISFLLWNLNGHTNHVHCGF*LFVFHW
Trigger: CCAGTGGAATACAAACAGGCAGAAGCCACAGTGCAC...GTGGTTTGTGTGTCCATTGAGATTCCATAGGAGAAAACTAATTTTTCCTTTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
CDS-3UTR CCA 90 bp GCGAAAGTTCACAATAAATATCACTCAACAGGCCTTATTGCTGCCAGCACACATAGTTCGTGTGCACTGTaGCTTCTGCCTGTTTGTATT +
Preference number: 4 (lower is better)
Translates to: AKVHNKYHSTGLIAASTHSSCAL*LLPVCI
Trigger: AATACAAACAGGCAGAAGCCACAGTGCACACGAACT...ATGTGTGCTGGCAGCAATAAGGCCTGTTGAGTGATATTTATTGTGAACTTTCGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 72 bp CATCTTTCTTTCTTTCTTTTCCCTCACTTCTTTCTTTaGATAGGATCTCCTGTCTCCCCGGATGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: HLSFFLFPHFFL*IGSPVSPDGTE
Trigger: TTCAGTGCCATCCGGGGAGACAGGAGATCCTATCAAAAGAAAGAAGTGAGGGAAAAGAAAGAAAGAAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 72 bp GGTTCTCTTGCTTGGCTCAGTGCTGGCTTTATTGGATaGTGGGCAACAAAAGTATTGAGTAGTTATCTGACT +
Preference number: 4 (lower is better)
Translates to: GSLAWLSAGFIG*WATKVLSSYLT
Trigger: AGTCAGATAACTACTCAATACTTTTGTTGCCCACAATCCAATAAAGCCAGCACTGAGCCAAGCAAGAGAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 72 bp ACTTCTGCTACTAAGCCACGCCTAGCTTTTATGTCTTaGAGTCTTGCTATGTACCTTAGGATTGCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: TSATKPRLAFMS*SLAMYLRIASK
Trigger: CTTTGAGGCAATCCTAAGGTACATAGCAAGACTCAAAGACATAAAAGCTAGGCGTGGCTTAGTAGCAGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 72 bp AGTGTGGTAAAAGGACTTGCAGTTAAGCTTAGCTACTaGAGTTACATCCCTGGAACCCACAGTGGAAAGAAT +
Preference number: 4 (lower is better)
Translates to: SVVKGLAVKLSY*SYIPGTHSGKN
Trigger: ATTCTTTCCACTGTGGGTTCCAGGGATGTAACTCAAGTAGCTAAGCTTAACTGCAAGTCCTTTTACCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
CDS-3UTR TCA 90 bp CGGCTGTCTTCTGCTATGAATCGTGCATCTGCTGCCTTCTACAAAATAAAAATGGTGAATGAGGTTAGATaGGGAAGTGAAGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: RLSSAMNRASAAFYKIKMVNEVR*GSEGFL
Trigger: GAGAAAACCTTCACTTCCTCATCTAACCTCATTCAC...CATTTTTATTTTGTAGAAGGCAGCAGATGCACGATTCATAGCAGAAGACAGCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
CDS-3UTR TCA 90 bp TTACTATCCAGAAGTTATAGCAGCCAACATAAAATGGAGTTCCTTGAAGAAAAGAGAGTGAGATCCTGCTaGGGCCAGGTTCTGGTAGTT +
Preference number: 4 (lower is better)
Translates to: LLSRSYSSQHKMEFLEEKRVRSC*GQVLVV
Trigger: AACTACCAGAACCTGGCCTCAGCAGGATCTCACTCT...CTTTTCTTCAAGGAACTCCATTTTATGTTGGCTGCTATAACTTCTGGATAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
CDS-3UTR GCA 90 bp GCGAAAGTTCACAATAAATATCACTCAACAGGCCTTATTGCTGCCAGCACACATTGGAGATCTTCTCTGTaGAAATCCTCTTCTTCCAAC +
Preference number: 4 (lower is better)
Translates to: AKVHNKYHSTGLIAASTHWRSSL*KSSSSN
Trigger: GTTGGAAGAAGAGGATTTGCACAGAGAAGATCTCCA...ATGTGTGCTGGCAGCAATAAGGCCTGTTGAGTGATATTTATTGTGAACTTTCGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 72 bp GCTGATTCATCTAACTTGCCCTGGAAGCGTTGTCTATaGCTTGTTTTATGGCTTTATTGCCACTTCGTTTTC +
Preference number: 4 (lower is better)
Translates to: ADSSNLPWKRCL*LVLWLYCHFVF
Trigger: GAAAACGAAGTGGCAATAAAGCCATAAAACAAGCAATAGACAACGCTTCCAGGGCAAGTTAGATGAATCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
CDS-3UTR TCA 90 bp TTATCCATCACCTCACCTCGAGCCATCTCAGCAGCCCAAGTTCTTATTATTGATATGGGTCTTGAAATATaGGTGCTCACTGAAAATTTC +
Preference number: 4 (lower is better)
Translates to: LSITSPRAISAAQVLIIDMGLEI*VLTENF
Trigger: GAAATTTTCAGTGAGCACTCATATTTCAAGACCCAT...ATCAATAATAAGAACTTGGGCTGCTGAGATGGCTCGAGGTGAGGTGATGGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
CDS-3UTR TCA 90 bp GCGAAAGTTCACAATAAATATCACTCAACAGGCCTTATTGCTGCCAGCACACATATGTTCAGTTCGGCTTaGGGAAGTAGTGAAATCTTT +
Preference number: 4 (lower is better)
Translates to: AKVHNKYHSTGLIAASTHMFSSA*GSSEIF
Trigger: AAAGATTTCACTACTTCCTCAAGCCGAACTGAACAT...ATGTGTGCTGGCAGCAATAAGGCCTGTTGAGTGATATTTATTGTGAACTTTCGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
CDS-3UTR TCA 90 bp GCGAAAGTTCACAATAAATATCACTCAACAGGCCTTATTGCTGCCAGCACACATTGGATTTTTACGTGGTaGATGAGGTTAGATGAGGAA +
Preference number: 4 (lower is better)
Translates to: AKVHNKYHSTGLIAASTHWIFTW*MRLDEE
Trigger: TTCCTCATCTAACCTCATTCACCACGTAAAAATCCA...ATGTGTGCTGGCAGCAATAAGGCCTGTTGAGTGATATTTATTGTGAACTTTCGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
CDS-3UTR TCA 90 bp CCCAAAGGAAAAATTAGTTTTCTCCTATGGAATCTCAATGGACACACAAACCACGGCTTTTCAACTGCATaGGTTTTTAAGTGGTCGTGT +
Preference number: 4 (lower is better)
Translates to: PKGKISFLLWNLNGHTNHGFSTA*VFKWSC
Trigger: ACACGACCACTTAAAAACTCATGCAGTTGAAAAGCC...GTGGTTTGTGTGTCCATTGAGATTCCATAGGAGAAAACTAATTTTTCCTTTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 72 bp AGTGCTGGCTTTATTGGATTGTGGGCAACAAAAGTATaGAGTAGTTATCTGACTGTGTCACTAGACACACTT +
Preference number: 4 (lower is better)
Translates to: SAGFIGLWATKV*SSYLTVSLDTL
Trigger: AAGTGTGTCTAGTGACACAGTCAGATAACTACTCAATACTTTTGTTGCCCACAATCCAATAAAGCCAGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 72 bp ATTGTGAGTAGTTGCCTTTGTTTTCTTCTAAGTGTTTaGGGTTTAGCTTCTAGTTCCTTGCTGTGGCAAGTT +
Preference number: 4 (lower is better)
Translates to: IVSSCLCFLLSV*GLASSSLLWQV
Trigger: AACTTGCCACAGCAAGGAACTAGAAGCTAAACCCAAAACACTTAGAAGAAAACAAAGGCAACTACTCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 72 bp AAGTATGTGGCACAATGCAGAGCTATAGATTCTTTTTaGGAGATGAAAATGTCGATGTGCACATATACTTCG +
Preference number: 4 (lower is better)
Translates to: KYVAQCRAIDSF*EMKMSMCTYTS
Trigger: CGAAGTATATGTGCACATCGACATTTTCATCTCCAAAAAAGAATCTATAGCTCTGCATTGTGCCACATACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 72 bp TCAACACAAAATGAATTTAATGGCATTACTGGAGGTTaGCCTTACAGGTCTTTGCATTTATATTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: STQNEFNGITGG*PYRSLHLYWFL
Trigger: CAGAAACCAATATAAATGCAAAGACCTGTAAGGCAAACCTCCAGTAATGCCATTAAATTCATTTTGTGTTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
3UTR CAA 72 bp AAAGGACACTACACTGTATGCTACAGAGTCAGATATTaGGTCAACCATATTCATTGCTGCTCTATTTATAAT +
Preference number: 4 (lower is better)
Translates to: KGHYTVCYRVRY*VNHIHCCSIYN
Trigger: ATTATAAATAGAGCAGCAATGAATATGGTTGACCAAATATCTGACTCTGTAGCATACAGTGTAGTGTCCTTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
CDS-3UTR CAA 90 bp TATGATGCACCATCCAGGTCTACCAGAGGCAAAACACAGGGACAGGAGGCTGGGGAGATCAGACTGGGTTaGATGACCTCACATCCTGCT +
Preference number: 5 (lower is better)
Translates to: YDAPSRSTRGKTQGQEAGEIRLG*MTSHPA
Trigger: AGCAGGATGTGAGGTCATCAAACCCAGTCTGATCTC...CCCAGCCTCCTGTCCCTGTGTTTTGCCTCTGGTAGACCTGGATGGTGCATCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
CDS-3UTR CAA 90 bp CTCTCCACCGTATTCACAGAGGCGGGTCTCTCAGCTGCTCTTGCTAGCCAGATTTGTAGGTATGAGGAATaGAGGAAGGCCTTTCCACAT +
Preference number: 5 (lower is better)
Translates to: LSTVFTEAGLSAALASQICRYEE*RKAFPH
Trigger: ATGTGGAAAGGCCTTCCTCAATTCCTCATACCTACA...AATCTGGCTAGCAAGAGCAGCTGAGAGACCCGCCTCTGTGAATACGGTGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
CDS-3UTR CAA 90 bp TTTGATGACCTCACATCCTTCAATCCCAGCACTTGCACATGGGAAGCAGATTTCAGACCTGGTAACAATTaGTCAGGCAATCAGCCACCA +
Preference number: 5 (lower is better)
Translates to: FDDLTSFNPSTCTWEADFRPGNN*SGNQPP
Trigger: TGGTGGCTGATTGCCTGACAAATTGTTACCAGGTCT...GAAATCTGCTTCCCATGTGCAAGTGCTGGGATTGAAGGATGTGAGGTCATCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140668.8
CDS-3UTR CAA 90 bp CACAATGGAATCTTTATCAGTCTTAAAGAAAGATGGCCAGGAGATGGCTCAGTGAGACCTGGTAACAATTaGTCAGGCAATCAGCCACCA +
Preference number: 5 (lower is better)
Translates to: HNGIFISLKERWPGDGSVRPGNN*SGNQPP
Trigger: TGGTGGCTGATTGCCTGACAAATTGTTACCAGGTCT...CACTGAGCCATCTCCTGGCCATCTTTCTTTAAGACTGATAAAGATTCCATTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
CDS-3UTR CAA 90 bp TTATCCATCACCTCACCTCGAGCCATCTCAGCAGCCCAAGTTCTTATTATTGATGTTTTCACATGGGTCTaGAAATATGAGTGCTCACTG +
Preference number: 5 (lower is better)
Translates to: LSITSPRAISAAQVLIIDVFTWV*KYECSL
Trigger: CAGTGAGCACTCATATTTCAAGACCCATGTGAAAAC...ATCAATAATAAGAACTTGGGCTGCTGAGATGGCTCGAGGTGAGGTGATGGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10
CDS-3UTR CAA 90 bp TACTCACTTAGCTTTGACCACCTCGATGTAATGTGCTGGGTGTTCATTTTGGTCCATGTCTACGTAGATTaGAGTAAGAATGGAAGGCTT +
Preference number: 5 (lower is better)
Translates to: YSLSFDHLDVMCWVFILVHVYVD*SKNGRL
Trigger: AAGCCTTCCATTCTTACTCAAATCTACGTAGACATG...GACCAAAATGAACACCCAGCACATTACATCGAGGTGGTCAAAGCTAAGTGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000115557.10