Pregenerated sensors for ZFP84 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046185Ensembl transcript IDs: ENSMUST00000032802.5
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTACCACACAATTTCCCACTGGCAAATTCCATGTTCACTGCCTTTaGTTGCTGCCTGATTTTGAAATCTGGAGAATACCTTATTTTATA | + |
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Preference number: 1 (lower is better) Translates to: STTQFPTGKFHVHCL*LLPDFEIWRIPYFI Trigger: TATAAAATAAGGTATTCTCCAGATTTCAAAATCAGGCAGCAAGCAAAGGCAGTGAACATGGAATTTGCCAGTGGGAAATTGTGTGGTAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR CCA 90 bp | AAATTCCATGTTCACTGCCTTTGCTTGCTGCCTGATTTTGAAATCTaGAGAATACCTTATTTTATAGCAGTCAAACTTTCTGTCTGTACC | + |
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Preference number: 1 (lower is better) Translates to: KFHVHCLCLLPDFEI*RIPYFIAVKLSVCT Trigger: GGTACAGACAGAAAGTTTGACTGCTATAAAATAAGGTATTCTCCAGATTTCAAAATCAGGCAGCAAGCAAAGGCAGTGAACATGGAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR-3UTR GCA 90 bp | CTGCCTAGGCCATTTAGCCAAGACCCTGCCTGCCTCAGAACAAAGAGAGCCGGGGATCCGACTGTCCTCTaGTGTGCCGGGCACCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: LPRPFSQDPACLRTKRAGDPTVL*CAGHPE Trigger: CTCAGGGTGCCCGGCACAGCAGAGGACAGTCGGATC...CCCGGCTCTCTTTGTTCTGAGGCAGGCAGGGTCTTGGCTAAATGGCCTAGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR-3UTR TCA 90 bp | CCGTCCCTCAGTTTTGATCTTTCTGCAGCATTGTCTGTCTTCCCTTTCCCACTTAGGGCAGAGCCAAGCTaGGCAGGCTCAAGGCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: PSLSFDLSAALSVFPFPLRAEPS*AGSRLQ Trigger: TTGGAGCCTTGAGCCTGCTCAGCTTGGCTCTGCCCT...AAGTGGGAAAGGGAAGACAGACAATGCTGCAGAAAGATCAAAACTGAGGGACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR-3UTR GCA 90 bp | ACGGGCTTCCCCCGTCCCTCAGTTTTGATCTTTCTGCAGCATTGTCTGTCTTCCAAGGGCACCAAAGCCTaGCTAGGCCATTTAGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: TGFPRPSVLIFLQHCLSSKGTKA*LGHLAK Trigger: CTTGGCTAAATGGCCTAGGCAGGCTTTGGTGCCCTT...GGAAGACAGACAATGCTGCAGAAAGATCAAAACTGAGGGACGGGGGAAGCCCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR-3UTR GCA 90 bp | ACGGGCTTCCCCCGTCCCTCAGTTTTGATCTTTCTGCAGCATTGTCTGTCTTCCGTTAAGAGCACTGACTaGTCTTCAGGAGGTCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: TGFPRPSVLIFLQHCLSSVKSTD*SSGGPE Trigger: CTCAGGACCTCCTGAAGAGCAGTCAGTGCTCTTAAC...GGAAGACAGACAATGCTGCAGAAAGATCAAAACTGAGGGACGGGGGAAGCCCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR-3UTR TCA 90 bp | GTAGAGCTGTTGTTCTTCCACACTGAAGCAAGCTGTATTTTCAGACTGCACTTTGGGCACCCTGAGCAGTaGGTCCATGTGGCCTTGCTA | + |
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Preference number: 2 (lower is better) Translates to: VELLFFHTEASCIFRLHFGHPEQ*VHVALL Trigger: TAGCAAGGCCACATGGACTCACTGCTCAGGGTGCCC...AAAGTGCAGTCTGAAAATACAGCTTGCTTCAGTGTGGAAGAACAACAGCTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR-3UTR TCA 90 bp | ACGGGCTTCCCCCGTCCCTCAGTTTTGATCTTTCTGCAGCATTGTCTGTCTTCCCAACATCTATTCAAATaGACCACGCCAGGCTTTAGT | + |
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Preference number: 2 (lower is better) Translates to: TGFPRPSVLIFLQHCLSSQHLFK*TTPGFS Trigger: ACTAAAGCCTGGCGTGGTTCATTTGAATAGATGTTG...GGAAGACAGACAATGCTGCAGAAAGATCAAAACTGAGGGACGGGGGAAGCCCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR-3UTR GCA 90 bp | CCCACTTTTAAGCTGGGGCTGTCCTATGGACCTCAGGCTAATCTGAAGCCACAGAAATTCCATGTTCACTaGCTTTGCTTGCTGCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: PTFKLGLSYGPQANLKPQKFHVH*LCLLPD Trigger: ATCAGGCAGCAAGCAAAGGCAGTGAACATGGAATTT...CTGTGGCTTCAGATTAGCCTGAGGTCCATAGGACAGCCCCAGCTTAAAAGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR-3UTR TCA 90 bp | CGGTTGTGCTTGTGTCTTTCAAATGTCCCTCTAGGCCCCCGAAAACCTAGTCTAAAAGACCCCATTTACTaGTTCATCCCGTCCCCAAAA | + |
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Preference number: 2 (lower is better) Translates to: RLCLCLSNVPLGPRKPSLKDPIY*FIPSPK Trigger: TTTTGGGGACGGGATGAATCAGTAAATGGGGTCTTT...TAGACTAGGTTTTCGGGGGCCTAGAGGGACATTTGAAAGACACAAGCACAACCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR-3UTR TCA 90 bp | GGCCATTTAGCCAAGACCCTGCCTGCCTCAGAACAAAGAGAGCCGGGAATAAAAGTTGTTCTTCCACACTaGAGCAAGCTGTATTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: GHLAKTLPASEQREPGIKVVLPH*SKLYFQ Trigger: CTGAAAATACAGCTTGCTTCAGTGTGGAAGAACAAC...TTTTATTCCCGGCTCTCTTTGTTCTGAGGCAGGCAGGGTCTTGGCTAAATGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR-3UTR TCA 90 bp | GGCCATTTAGCCAAGACCCTGCCTGCCTCAGAACAAAGAGAGCCGGGAATAAAAGACGGTGACAGATTATaGGTTTGTTCCAATTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: GHLAKTLPASEQREPGIKDGDRL*VCSNSC Trigger: ACAAGAATTGGAACAAACTCATAATCTGTCACCGTC...TTTTATTCCCGGCTCTCTTTGTTCTGAGGCAGGCAGGGTCTTGGCTAAATGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR-3UTR GCA 90 bp | CGGTTGTGCTTGTGTCTTTCAAATGTCCCTCTAGGCCCCCGAAAACCTAGTCTACCTACACTAACAGCATaGACACCATTGTTCTCTATG | + |
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Preference number: 2 (lower is better) Translates to: RLCLCLSNVPLGPRKPSLPTLTA*TPLFSM Trigger: CATAGAGAACAATGGTGTGCATGCTGTTAGTGTAGG...TAGACTAGGTTTTCGGGGGCCTAGAGGGACATTTGAAAGACACAAGCACAACCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR CAA 90 bp | TCCTATGGACCTCAGGCTAATCTGAAGCCACAGCAATATCGTTCCTaGCCAGGGATAATTTCAGATATGACCCACACCAACCTAGTATTC | + |
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Preference number: 2 (lower is better) Translates to: SYGPQANLKPQQYRS*PGIISDMTHTNLVF Trigger: GAATACTAGGTTGGTGTGGGTCATATCTGAAATTATCCCTGGCAAGGAACGATATTGCTGTGGCTTCAGATTAGCCTGAGGTCCATAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR-3UTR GCA 90 bp | GGACCTCAGGCTAATCTGAAGCCACAGCAATATCGTTCCTTGCCAGGGATAATTGAACAAACATACTTCTaGCTGGGAATGCTCTACTTC | + |
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Preference number: 2 (lower is better) Translates to: GPQANLKPQQYRSLPGIIEQTYF*LGMLYF Trigger: GAAGTAGAGCATTCCCAGGCAGAAGTATGTTTGTTC...AATTATCCCTGGCAAGGAACGATATTGCTGTGGCTTCAGATTAGCCTGAGGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR-3UTR GCA 90 bp | CCGTCCCTCAGTTTTGATCTTTCTGCAGCATTGTCTGTCTTCCCTTTCCCACTTACTGCCTTTGCTTGCTaGCTGATTTTGAAATCTGGA | + |
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Preference number: 2 (lower is better) Translates to: PSLSFDLSAALSVFPFPLTAFAC*LILKSG Trigger: TCCAGATTTCAAAATCAGGCAGCAAGCAAAGGCAGT...AAGTGGGAAAGGGAAGACAGACAATGCTGCAGAAAGATCAAAACTGAGGGACGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR-3UTR GCA 90 bp | GGACCTCAGGCTAATCTGAAGCCACAGCAATATCGTTCCTTGCCAGGGATAATTGCTGTATTTTCAGACTaGACTTTTCACATGACTGAG | + |
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Preference number: 2 (lower is better) Translates to: GPQANLKPQQYRSLPGIIAVFSD*TFHMTE Trigger: CTCAGTCATGTGAAAAGTGCAGTCTGAAAATACAGC...AATTATCCCTGGCAAGGAACGATATTGCTGTGGCTTCAGATTAGCCTGAGGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR-3UTR CCA 90 bp | CCGTCCCTCAGTTTTGATCTTTCTGCAGCATTGTCTGTCTTCCCTTTCCCACTTTCTATGTATCAGATTTaGAAAAAGCTCCTAAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: PSLSFDLSAALSVFPFPLSMYQI*KKLLKS Trigger: GGACTTTAGGAGCTTTTTCCAAATCTGATACATAGA...AAGTGGGAAAGGGAAGACAGACAATGCTGCAGAAAGATCAAAACTGAGGGACGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR CAA 90 bp | ATCAGCCTATTCAAAAGGTTATTGGAGTTACTGATACAATTTATGTaGACCATTCTACCACACAATTTCCCACTGGCAAATTCCATGTTC | + |
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Preference number: 2 (lower is better) Translates to: ISLFKRLLELLIQFM*TILPHNFPLANSMF Trigger: GAACATGGAATTTGCCAGTGGGAAATTGTGTGGTAGAATGGTCAACATAAATTGTATCAGTAACTCCAATAACCTTTTGAATAGGCTGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR-3UTR TCA 90 bp | GTGGGTATGAATGTTCCAAAAATAGTAACAAAGAACATCATAAGAGGACGGTTCAATCTGAAGCAGGGCTaGAGTCAACTTAATAAAACA | + |
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Preference number: 2 (lower is better) Translates to: VGMNVPKIVTKNIIRGRFNLKQG*SQLNKT Trigger: TGTTTTATTAAGTTGACTTCAGCCCTGCTTCAGATT...GAACCGTCCTCTTATGATGTTCTTTGTTACTATTTTTGGAACATTCATACCCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR TCA 72 bp | CACAGATCCGACTGTCCTCTGCTGTGCCGGGCACCCTaGGCAGTGAGTCCATGTGGCCTTGCTAGGGTCGGC | + |
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Preference number: 3 (lower is better) Translates to: HRSDCPLLCRAP*AVSPCGLARVG Trigger: GCCGACCCTAGCAAGGCCACATGGACTCACTGCTCAGGGTGCCCGGCACAGCAGAGGACAGTCGGATCTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR-3UTR CAA 90 bp | ACGGGCTTCCCCCGTCCCTCAGTTTTGATCTTTCTGCAGCATTGTCTGTCTTCCACGCCGGAACTCCTTTaGAAGGCTTTGGCATGGGAC | + |
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Preference number: 3 (lower is better) Translates to: TGFPRPSVLIFLQHCLSSTPELL*KALAWD Trigger: GTCCCATGCCAAAGCCTTCAAAAGGAGTTCCGGCGT...GGAAGACAGACAATGCTGCAGAAAGATCAAAACTGAGGGACGGGGGAAGCCCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR GCA 72 bp | CAAAGCCTGCCTAGGCCATTTAGCCAAGACCCTGCCTaGCTCAGAACAAAGAGAGCCGGGAATAAAAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: QSLPRPFSQDPA*LRTKRAGNKRL Trigger: GAGCCTTTTATTCCCGGCTCTCTTTGTTCTGAGGCAGGCAGGGTCTTGGCTAAATGGCCTAGGCAGGCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR-3UTR CAA 90 bp | ACGGGCTTCCCCCGTCCCTCAGTTTTGATCTTTCTGCAGCATTGTCTGTCTTCCGCACAGTCTGAGAGGTaGTTTCACACCCTTCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: TGFPRPSVLIFLQHCLSSAQSER*FHTLPF Trigger: GAAGGGAAGGGTGTGAAACAACCTCTCAGACTGTGC...GGAAGACAGACAATGCTGCAGAAAGATCAAAACTGAGGGACGGGGGAAGCCCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR-3UTR CAA 90 bp | CTGCCTAGGCCATTTAGCCAAGACCCTGCCTGCCTCAGAACAAAGAGAGCCGGGACAGCATGCACACCATaGTTCTCTATGTGGTACTGT | + |
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Preference number: 3 (lower is better) Translates to: LPRPFSQDPACLRTKRAGTACTP*FSMWYC Trigger: ACAGTACCACATAGAGAACAATGGTGTGCATGCTGT...CCCGGCTCTCTTTGTTCTGAGGCAGGCAGGGTCTTGGCTAAATGGCCTAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR-3UTR CAA 90 bp | ACGGGCTTCCCCCGTCCCTCAGTTTTGATCTTTCTGCAGCATTGTCTGTCTTCCGTCTATGTATCAGATTaGGAAAAAGCTCCTAAAGTC | + |
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Preference number: 3 (lower is better) Translates to: TGFPRPSVLIFLQHCLSSVYVSD*EKAPKV Trigger: GACTTTAGGAGCTTTTTCCAAATCTGATACATAGAC...GGAAGACAGACAATGCTGCAGAAAGATCAAAACTGAGGGACGGGGGAAGCCCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR GCA 72 bp | ACATGGTGGCTCACAAACATCTGTAATGAAATCGGATaGCTTCTTCTGGTGTGTCTGAAGACAGCTACAGTG | + |
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Preference number: 3 (lower is better) Translates to: TWWLTNICNEIG*LLLVCLKTATV Trigger: CACTGTAGCTGTCTTCAGACACACCAGAAGAAGGCATCCGATTTCATTACAGATGTTTGTGAGCCACCATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR TCA 72 bp | TCCTCCCAGCTAAAAGGCAGCAATCTGAAGCAGGGCTaGAGTCAACTTAATAAAACACAGTCAGCAATCGAT | + |
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Preference number: 3 (lower is better) Translates to: SSQLKGSNLKQG*SQLNKTQSAID Trigger: ATCGATTGCTGACTGTGTTTTATTAAGTTGACTTCAGCCCTGCTTCAGATTGCTGCCTTTTAGCTGGGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR GCA 72 bp | ACCACACAATTTCCCACTGGCAAATTCCATGTTCACTaGCTTTGCTTGCTGCCTGATTTTGAAATCTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: TTQFPTGKFHVH*LCLLPDFEIWR Trigger: TCTCCAGATTTCAAAATCAGGCAGCAAGCAAAGGCAGTGAACATGGAATTTGCCAGTGGGAAATTGTGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR-3UTR CAA 90 bp | GCTCTACTTCCCATTAGCTCTGACGGTTGTGCTTGTGTCTTTCAAATGTCCCTCGGGAAGGTGTGTAATTaGACAACATCTATTCAAATG | + |
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Preference number: 3 (lower is better) Translates to: ALLPISSDGCACVFQMSLGKVCN*TTSIQM Trigger: CATTTGAATAGATGTTGTCAAATTACACACCTTCCC...GAGGGACATTTGAAAGACACAAGCACAACCGTCAGAGCTAATGGGAAGTAGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR GCA 72 bp | CAATTTCCCACTGGCAAATTCCATGTTCACTGCCTTTaGTTGCTGCCTGATTTTGAAATCTGGAGAATACCT | + |
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Preference number: 3 (lower is better) Translates to: QFPTGKFHVHCL*LLPDFEIWRIP Trigger: AGGTATTCTCCAGATTTCAAAATCAGGCAGCAAGCAAAGGCAGTGAACATGGAATTTGCCAGTGGGAAATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| CDS-3UTR TCA 90 bp | CTCACACTTCTAATCCCAGCACTCAGTAGGTTCAAGCAGGAGGATTGCCACAAGGGTGGGACCTCTGCCTaGAGGCCTTGCTACACTGCT | + |
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Preference number: 4 (lower is better) Translates to: LTLLIPALSRFKQEDCHKGGTSA*RPCYTA Trigger: AGCAGTGTAGCAAGGCCTTCAGGCAGAGGTCCCACC...CTTGTGGCAATCCTCCTGCTTGAACCTACTGAGTGCTGGGATTAGAAGTGTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| CDS-3UTR GCA 90 bp | CCTAGGCCATTTAGCCAAGACCCTGCCTGCCTCAGAACAAAGAGAGCCGGGAATCAGGGCTCTTTGCCTTaGTCCAGCAGTGAAATTATT | + |
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Preference number: 4 (lower is better) Translates to: PRPFSQDPACLRTKRAGNQGSLP*SSSEII Trigger: AATAATTTCACTGCTGGAGCAAGGCAAAGAGCCCTG...ATTCCCGGCTCTCTTTGTTCTGAGGCAGGCAGGGTCTTGGCTAAATGGCCTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| CDS-3UTR CCA 90 bp | CTCACACTTCTAATCCCAGCACTCAGTAGGTTCAAGCAGGAGGATTGCCACAAGCTTCACTCAGAGCAATaGGTGCAGGCTGAACGAATC | + |
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Preference number: 4 (lower is better) Translates to: LTLLIPALSRFKQEDCHKLHSEQ*VQAERI Trigger: GATTCGTTCAGCCTGCACCCATTGCTCTGAGTGAAG...CTTGTGGCAATCCTCCTGCTTGAACCTACTGAGTGCTGGGATTAGAAGTGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| CDS-3UTR TCA 90 bp | ACCGAACAAACATACTTCTGCCTGGGAATGCTCTACTTCCCATTAGCTCTGACGGGTTGGAAGCCCAAGTaGAGGTCTTTCCGCATAAGT | + |
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Preference number: 4 (lower is better) Translates to: TEQTYFCLGMLYFPLALTGWKPK*RSFRIS Trigger: ACTTATGCGGAAAGACCTTCACTTGGGCTTCCAACC...CGTCAGAGCTAATGGGAAGTAGAGCATTCCCAGGCAGAAGTATGTTTGTTCGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| CDS-3UTR CCA 90 bp | ACCGAACAAACATACTTCTGCCTGGGAATGCTCTACTTCCCATTAGCTCTGACGTTCATGAAGGCCGAATaGCAGAGAAAGGCCTTTTCG | + |
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Preference number: 4 (lower is better) Translates to: TEQTYFCLGMLYFPLALTFMKAE*QRKAFS Trigger: CGAAAAGGCCTTTCTCTGCCATTCGGCCTTCATGAA...CGTCAGAGCTAATGGGAAGTAGAGCATTCCCAGGCAGAAGTATGTTTGTTCGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| CDS-3UTR GCA 90 bp | CTCACACTTCTAATCCCAGCACTCAGTAGGTTCAAGCAGGAGGATTGCCACAAGTCTCAAGGAGTCCCTTaGATTTCCAATCATCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: LTLLIPALSRFKQEDCHKSQGVP*ISNHLQ Trigger: TTGGAGATGATTGGAAATGCAAGGGACTCCTTGAGA...CTTGTGGCAATCCTCCTGCTTGAACCTACTGAGTGCTGGGATTAGAAGTGTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| CDS-3UTR TCA 90 bp | CGGTTGTGCTTGTGTCTTTCAAATGTCCCTCTAGGCCCCCGAAAACCTAGTCTATTGTTAAAGGCCTTCTaGCATTTGTGGCATTCGTAT | + |
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Preference number: 4 (lower is better) Translates to: RLCLCLSNVPLGPRKPSLLLKAF*HLWHSY Trigger: ATACGAATGCCACAAATGTCAGAAGGCCTTTAACAA...TAGACTAGGTTTTCGGGGGCCTAGAGGGACATTTGAAAGACACAAGCACAACCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| CDS-3UTR GCA 90 bp | TTCCCGCATTTCCGAGTCATTAATGTTTATCTTCTGTGTGGTTGTGAAGATGCTACTCAGAGCAATGGGTaGAGGCTGAACGAATCTGGC | + |
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Preference number: 4 (lower is better) Translates to: FPHFRVINVYLLCGCEDATQSNG*RLNESG Trigger: GCCAGATTCGTTCAGCCTGCACCCATTGCTCTGAGT...AGCATCTTCACAACCACACAGAAGATAAACATTAATGACTCGGAAATGCGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| CDS-3UTR CCA 90 bp | TTCCCGCATTTCCGAGTCATTAATGTTTATCTTCTGTGTGGTTGTGAAGATGCTATTTCCCCCACCGTGTaGACTCTCTGGTGTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: FPHFRVINVYLLCGCEDAISPTV*TLWCFF Trigger: GAAGAAACACCAGAGAGTCCACACGGTGGGGGAAAT...AGCATCTTCACAACCACACAGAAGATAAACATTAATGACTCGGAAATGCGGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR CAA 72 bp | TTTCCCACTGGCAAATTCCATGTTCACTGCCTTTGCTaGCTGCCTGATTTTGAAATCTGGAGAATACCTTAT | + |
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Preference number: 4 (lower is better) Translates to: FPTGKFHVHCLC*LPDFEIWRIPY Trigger: ATAAGGTATTCTCCAGATTTCAAAATCAGGCAGCAAGCAAAGGCAGTGAACATGGAATTTGCCAGTGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| CDS-3UTR TCA 90 bp | GTAGAGCTGTTGTTCTTCCACACTGAAGCAAGCTGTATTTTCAGACTGCACTTTGAGTTTTACAATCAATaGAAGCCTTCCCACACTCTT | + |
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Preference number: 4 (lower is better) Translates to: VELLFFHTEASCIFRLHFEFYNQ*KPSHTL Trigger: AAGAGTGTGGGAAGGCTTTCATTGATTGTAAAACTC...AAAGTGCAGTCTGAAAATACAGCTTGCTTCAGTGTGGAAGAACAACAGCTCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| CDS-3UTR GCA 90 bp | TTCCCGCATTTCCGAGTCATTAATGTTTATCTTCTGTGTGGTTGTGAAGATGCTGTGTGGATCCTCTGGTaGAGAATGAGAGTTTTACAA | + |
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Preference number: 4 (lower is better) Translates to: FPHFRVINVYLLCGCEDAVWILW*RMRVLQ Trigger: TTGTAAAACTCTCATTCTGCACCAGAGGATCCACAC...AGCATCTTCACAACCACACAGAAGATAAACATTAATGACTCGGAAATGCGGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| CDS-3UTR CCA 90 bp | GTGGGTATGAATGTTCCAAAAATAGTAACAAAGAACATCATAAGAGGACGGTTCACCGTGTGGACTCTCTaGTGTTTCTTCACCTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: VGMNVPKIVTKNIIRGRFTVWTL*CFFTCK Trigger: CTTACAGGTGAAGAAACACCAGAGAGTCCACACGGT...GAACCGTCCTCTTATGATGTTCTTTGTTACTATTTTTGGAACATTCATACCCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| 3UTR CAA 72 bp | TTCAAAAGGTTATTGGAGTTACTGATACAATTTATGTaGACCATTCTACCACACAATTTCCCACTGGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: FKRLLELLIQFM*TILPHNFPLAN Trigger: ATTTGCCAGTGGGAAATTGTGTGGTAGAATGGTCAACATAAATTGTATCAGTAACTCCAATAACCTTTTGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| CDS-3UTR CAA 90 bp | CCTAGGCCATTTAGCCAAGACCCTGCCTGCCTCAGAACAAAGAGAGCCGGGAATCTCTGCCTGAAGGCCTaGCTACACTGCTGGCACTGG | + |
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Preference number: 5 (lower is better) Translates to: PRPFSQDPACLRTKRAGNLCLKA*LHCWHW Trigger: CCAGTGCCAGCAGTGTAGCAAGGCCTTCAGGCAGAG...ATTCCCGGCTCTCTTTGTTCTGAGGCAGGCAGGGTCTTGGCTAAATGGCCTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| CDS-3UTR CAA 90 bp | ACGGGCTTCCCCCGTCCCTCAGTTTTGATCTTTCTGCAGCATTGTCTGTCTTCCGCCGCTGTGGATCCTTaGATGTCTAGTGAGGTTGGC | + |
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Preference number: 5 (lower is better) Translates to: TGFPRPSVLIFLQHCLSSAAVDP*MSSEVG Trigger: GCCAACCTCACTAGACATCAAAGGATCCACAGCGGC...GGAAGACAGACAATGCTGCAGAAAGATCAAAACTGAGGGACGGGGGAAGCCCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| CDS-3UTR CAA 90 bp | GCTCTACTTCCCATTAGCTCTGACGGTTGTGCTTGTGTCTTTCAAATGTCCCTCACGAGCAGCGAGCAGTaGGTGAAGGCTTTCCCGCAC | + |
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Preference number: 5 (lower is better) Translates to: ALLPISSDGCACVFQMSLTSSEQ*VKAFPH Trigger: GTGCGGGAAAGCCTTCACCAACTGCTCGCTGCTCGT...GAGGGACATTTGAAAGACACAAGCACAACCGTCAGAGCTAATGGGAAGTAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| CDS-3UTR CAA 90 bp | GGCCATTTAGCCAAGACCCTGCCTGCCTCAGAACAAAGAGAGCCGGGAATAAAAGCCGGTGTGAATCTTTaGGTGATCATTCAGGTTGGA | + |
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Preference number: 5 (lower is better) Translates to: GHLAKTLPASEQREPGIKAGVNL*VIIQVG Trigger: TCCAACCTGAATGATCACCAAAAGATTCACACCGGC...TTTTATTCCCGGCTCTCTTTGTTCTGAGGCAGGCAGGGTCTTGGCTAAATGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| CDS-3UTR CAA 90 bp | GCTCTACTTCCCATTAGCTCTGACGGTTGTGCTTGTGTCTTTCAAATGTCCCTCGTCTCAAGGAGTCCCTaGCATTTCCAATCATCTCCA | + |
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Preference number: 5 (lower is better) Translates to: ALLPISSDGCACVFQMSLVSRSP*HFQSSP Trigger: TGGAGATGATTGGAAATGCAAGGGACTCCTTGAGAC...GAGGGACATTTGAAAGACACAAGCACAACCGTCAGAGCTAATGGGAAGTAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| CDS CCA 72 bp | CTTCACTCAGAGCAATGGGTGCAGGCTGAACGAATCTaGCTGACGTCTCTTCCAACGGGTCTGTCACTCCCT | + |
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Preference number: 6 (lower is better) Translates to: LHSEQWVQAERI*LTSLPTGLSLP Trigger: AGGGAGTGACAGACCCGTTGGAAGAGACGTCAGCCAGATTCGTTCAGCCTGCACCCATTGCTCTGAGTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| CDS TCA 72 bp | GAATGCGTCACTTCACTCAGAGCAATGGGTGCAGGCTaGACGAATCTGGCTGACGTCTCTTCCAACGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: ECVTSLRAMGAG*TNLADVSSNGS Trigger: AGACCCGTTGGAAGAGACGTCAGCCAGATTCGTTCAGCCTGCACCCATTGCTCTGAGTGAAGTGACGCATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| CDS CAA 90 bp | CTCGTACATTTCATTAAGTTTGTCACTGGTAGGAATTCGCACCTGTaGAGTGATGGTTTCGCCTGCGTCCTGCTCAGAGAGTTTCGTTTC | + |
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Preference number: 6 (lower is better) Translates to: LVHFIKFVTGRNSHL*SDGFACVLLREFRF Trigger: GAAACGAAACTCTCTGAGCAGGACGCAGGCGAAACCATCACTCAACAGGTGCGAATTCCTACCAGTGACAAACTTAATGAAATGTACGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| CDS CAA 72 bp | TCCTCTGTAGATTCCCGTTTTGTCTCAAGGAGTCCCTaGCATTTCCAATCATCTCCAAAACAAGATTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: SSVDSRFVSRSP*HFQSSPKQDSS Trigger: TGAGGAATCTTGTTTTGGAGATGATTGGAAATGCAAGGGACTCCTTGAGACAAAACGGGAATCTACAGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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| CDS CAA 90 bp | TGTAAATATTCCTCTGTAGATTCCCGTTTTGTCTCAAGGAGTCCCTaGCATTTCCAATCATCTCCAAAACAAGATTCCTCAAGGCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: CKYSSVDSRFVSRSP*HFQSSPKQDSSRQE Trigger: TTCTTGCCTTGAGGAATCTTGTTTTGGAGATGATTGGAAATGCAAGGGACTCCTTGAGACAAAACGGGAATCTACAGAGGAATATTTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032802.5 |
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