Pregenerated sensors for ZFP839 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021271Ensembl transcript IDs: ENSMUST00000170060.4, ENSMUST00000221549.2, ENSMUST00000222460.2
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGAGGAGGAGGTGGCACAACATGGAGTGGCCGCAGGCTGGTGGGTaGGGATGGAGTGAACTTAACCACGACAGCCATCAAACTCTATCA | + |
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Preference number: 1 (lower is better) Translates to: ERRRWHNMEWPQAGG*GWSELNHDSHQTLS Trigger: TGATAGAGTTTGATGGCTGTCGTGGTTAAGTTCACTCCATCCTCACCCACCAGCCTGCGGCCACTCCATGTTGTGCCACCTCCTCCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| 3UTR CCA 90 bp | CACTCTGTAGCTAGAGGCAGGAAGACTGGGAGTTCAAGGCCAGTCTaGGCTACATGGGACCAGGCCTCAAAAACCAACACCCACATACAC | + |
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Preference number: 1 (lower is better) Translates to: HSVARGRKTGSSRPV*ATWDQASKTNTHIH Trigger: GTGTATGTGGGTGTTGGTTTTTGAGGCCTGGTCCCATGTAGCCCAGACTGGCCTTGAACTCCCAGTCTTCCTGCCTCTAGCTACAGAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| 3UTR TCA 90 bp | AATCCAGAGGTACAGAGAACATCTGTTGAAGAAACAGCACATCACTaGGAGGAGGAGGTGGCACAACATGGAGTGGCCGCAGGCTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: NPEVQRTSVEETAHH*EEEVAQHGVAAGWW Trigger: CCACCAGCCTGCGGCCACTCCATGTTGTGCCACCTCCTCCTCTCAGTGATGTGCTGTTTCTTCAACAGATGTTCTCTGTACCTCTGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| 3UTR GCA 90 bp | CTGCCACAGAACACATCTGTAACTCTAGCCTCAGGTTCAGGCAGATaGATCACAAATTCGGAGACCAGTCTGGGCTGTGCCAAACCCTGC | + |
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Preference number: 1 (lower is better) Translates to: LPQNTSVTLASGSGR*ITNSETSLGCAKPC Trigger: GCAGGGTTTGGCACAGCCCAGACTGGTCTCCGAATTTGTGATGCATCTGCCTGAACCTGAGGCTAGAGTTACAGATGTGTTCTGTGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| 3UTR CCA 90 bp | GCTAGAGGCAGGAAGACTGGGAGTTCAAGGCCAGTCTGGGCTACATaGGACCAGGCCTCAAAAACCAACACCCACATACACTCATTCATA | + |
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Preference number: 1 (lower is better) Translates to: ARGRKTGSSRPVWAT*DQASKTNTHIHSFI Trigger: TATGAATGAGTGTATGTGGGTGTTGGTTTTTGAGGCCTGGTCCCATGTAGCCCAGACTGGCCTTGAACTCCCAGTCTTCCTGCCTCTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| 3UTR TCA 90 bp | TTTGTAAGTTTTCTAGCTGAATCCAGAGGTACAGAGAACATCTGTTaGAGAAACAGCACATCACTGAGAGGAGGAGGTGGCACAACATGG | + |
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Preference number: 1 (lower is better) Translates to: FVSFLAESRGTENIC*RNSTSLRGGGGTTW Trigger: CCATGTTGTGCCACCTCCTCCTCTCAGTGATGTGCTGTTTCTTCAACAGATGTTCTCTGTACCTCTGGATTCAGCTAGAAAACTTACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAGGAGGTGGCACAACATGGAGTGGCCGCAGGCTGGTGGGTGAGGATGGACCAGTCTGGGCTACATaGGACCAGGCCTCAAAAACC | + |
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Preference number: 2 (lower is better) Translates to: RGGGGTTWSGRRLVGEDGPVWAT*DQASKT Trigger: GGTTTTTGAGGCCTGGTCCCATGTAGCCCAGACTGG...TCCATCCTCACCCACCAGCCTGCGGCCACTCCATGTTGTGCCACCTCCTCCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| 3UTR-3UTR CCA 90 bp | ACTGCCAAAACAAGTAGCTTTGTAAGTTTTCTAGCTGAATCCAGAGGTACAGAGAGTTCAAGGCCAGTCTaGGCTACATGGGACCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: TAKTSSFVSFLAESRGTESSRPV*ATWDQA Trigger: GGCCTGGTCCCATGTAGCCCAGACTGGCCTTGAACT...CTCTGTACCTCTGGATTCAGCTAGAAAACTTACAAAGCTACTTGTTTTGGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| 3UTR TCA 72 bp | AGGTGGCACAACATGGAGTGGCCGCAGGCTGGTGGGTaGGGATGGAGTGAACTTAACCACGACAGCCATCAA | + |
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Preference number: 3 (lower is better) Translates to: RWHNMEWPQAGG*GWSELNHDSHQ Trigger: TTGATGGCTGTCGTGGTTAAGTTCACTCCATCCTCACCCACCAGCCTGCGGCCACTCCATGTTGTGCCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| 3UTR CCA 72 bp | GCTAGAGGCAGGAAGACTGGGAGTTCAAGGCCAGTCTaGGCTACATGGGACCAGGCCTCAAAAACCAACACC | + |
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Preference number: 3 (lower is better) Translates to: ARGRKTGSSRPV*ATWDQASKTNT Trigger: GGTGTTGGTTTTTGAGGCCTGGTCCCATGTAGCCCAGACTGGCCTTGAACTCCCAGTCTTCCTGCCTCTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| 3UTR GCA 72 bp | AACACATCTGTAACTCTAGCCTCAGGTTCAGGCAGATaGATCACAAATTCGGAGACCAGTCTGGGCTGTGCC | + |
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Preference number: 3 (lower is better) Translates to: NTSVTLASGSGR*ITNSETSLGCA Trigger: GGCACAGCCCAGACTGGTCTCCGAATTTGTGATGCATCTGCCTGAACCTGAGGCTAGAGTTACAGATGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| 3UTR CCA 72 bp | TCTGTGGATAAAATCCATACAAAGTTCTGCCCAGCATaGTGGGACATCCCTGACACACTACCACTCTGTAGC | + |
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Preference number: 3 (lower is better) Translates to: SVDKIHTKFCPA*WDIPDTLPLCS Trigger: GCTACAGAGTGGTAGTGTGTCAGGGATGTCCCACCATGCTGGGCAGAACTTTGTATGGATTTTATCCACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| 3UTR TCA 72 bp | TTTCTAGCTGAATCCAGAGGTACAGAGAACATCTGTTaGAGAAACAGCACATCACTGAGAGGAGGAGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: FLAESRGTENIC*RNSTSLRGGGG Trigger: GCCACCTCCTCCTCTCAGTGATGTGCTGTTTCTTCAACAGATGTTCTCTGTACCTCTGGATTCAGCTAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR TCA 90 bp | AGAGGAGGAGGTGGCACAACATGGAGTGGCCGCAGGCTGGTGGGTGAGGATGGAGCAGGCTGGCTGTGCTaGCTTCTGCCTGGCTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: RGGGGTTWSGRRLVGEDGAGWLC*LLPGFP Trigger: GGGAAAGCCAGGCAGAAGTCAGCACAGCCAGCCTGC...TCCATCCTCACCCACCAGCCTGCGGCCACTCCATGTTGTGCCACCTCCTCCTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR CCA 90 bp | AGAGGAGGAGGTGGCACAACATGGAGTGGCCGCAGGCTGGTGGGTGAGGATGGAGGCCCAGGCTCCTGCTaGCATCCATTGGCAGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: RGGGGTTWSGRRLVGEDGGPGSC*HPLAEG Trigger: TCCCTCTGCCAATGGATGCCAGCAGGAGCCTGGGCC...TCCATCCTCACCCACCAGCCTGCGGCCACTCCATGTTGTGCCACCTCCTCCTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR TCA 90 bp | GCCCAGCATGGTGGGACATCCCTGACACACTACCACTCTGTAGCTAGAGGCAGGCGAGGAGCAGGAGGCTaGGGGGAGCGTCTAAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: AQHGGTSLTHYHSVARGRRGAGG*GERLRN Trigger: GTTCCTTAGACGCTCCCCTCAGCCTCCTGCTCCTCG...CCTGCCTCTAGCTACAGAGTGGTAGTGTGTCAGGGATGTCCCACCATGCTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR GCA 90 bp | CACTACCACTCTGTAGCTAGAGGCAGGAAGACTGGGAGTTCAAGGCCAGTCTGGAGCAGCACCCCAGGCTaGAGCCGGCTATGGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: HYHSVARGRKTGSSRPVWSSTPG*SRLWPG Trigger: CCCAGGCCATAGCCGGCTGCAGCCTGGGGTGCTGCT...CCAGACTGGCCTTGAACTCCCAGTCTTCCTGCCTCTAGCTACAGAGTGGTAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR GCA 90 bp | AGAGGAGGAGGTGGCACAACATGGAGTGGCCGCAGGCTGGTGGGTGAGGATGGACGAGCCCGCAGGTGGTaGATTTCTGTCACTAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RGGGGTTWSGRRLVGEDGRARRW*ISVTSR Trigger: CCTGCTAGTGACAGAAATGCACCACCTGCGGGCTCG...TCCATCCTCACCCACCAGCCTGCGGCCACTCCATGTTGTGCCACCTCCTCCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR GCA 90 bp | GCTAGAGGCAGGAAGACTGGGAGTTCAAGGCCAGTCTGGGCTACATGGGACCAGGACTCCTGGGCTGGGTaGATCCTGCTGGGCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: ARGRKTGSSRPVWATWDQDSWAG*ILLGSA Trigger: AGCAGAGCCCAGCAGGATGCACCCAGCCCAGGAGTC...CTGGTCCCATGTAGCCCAGACTGGCCTTGAACTCCCAGTCTTCCTGCCTCTAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR CCA 90 bp | CATGGTGGGACATCCCTGACACACTACCACTCTGTAGCTAGAGGCAGGAAGACTAAGCGCACGGCGCCGTaGCTCCGGCCGGGAAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: HGGTSLTHYHSVARGRKTKRTAP*LRPGRV Trigger: GACTCTTCCCGGCCGGAGCCACGGCGCCGTGCGCTT...AGTCTTCCTGCCTCTAGCTACAGAGTGGTAGTGTGTCAGGGATGTCCCACCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR TCA 90 bp | CATGGTGGGACATCCCTGACACACTACCACTCTGTAGCTAGAGGCAGGAAGACTCCAGGGCCTGCACCCTaGGCAGCTGAGGGCTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: HGGTSLTHYHSVARGRKTPGPAP*AAEGWR Trigger: TCTCCAGCCCTCAGCTGCTCAGGGTGCAGGCCCTGG...AGTCTTCCTGCCTCTAGCTACAGAGTGGTAGTGTGTCAGGGATGTCCCACCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR GCA 90 bp | GTTCAAGGCCAGTCTGGGCTACATGGGACCAGGCCTCAAAAACCAACACCCACACTGGCTGGACTGCTCTaGTCTCCCGCAGGCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VQGQSGLHGTRPQKPTPTLAGLL*SPAGWL Trigger: CAGCCAGCCTGCGGGAGAGCAGAGCAGTCCAGCCAG...TGTGGGTGTTGGTTTTTGAGGCCTGGTCCCATGTAGCCCAGACTGGCCTTGAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR CCA 90 bp | CATACAAAGTTCTGCCCAGCATGGTGGGACATCCCTGACACACTACCACTCTGTCAGCGTGCTGGGCGGTaGCTGCGCCCGAGTCACCTG | + |
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Preference number: 4 (lower is better) Translates to: HTKFCPAWWDIPDTLPLCQRAGR*LRPSHL Trigger: CAGGTGACTCGGGCGCAGCCACCGCCCAGCACGCTG...ACAGAGTGGTAGTGTGTCAGGGATGTCCCACCATGCTGGGCAGAACTTTGTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR CCA 90 bp | GCCCAGCATGGTGGGACATCCCTGACACACTACCACTCTGTAGCTAGAGGCAGGAGCAGGGTCGCCTTCTaGCTGGACTGCTCTGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: AQHGGTSLTHYHSVARGRSRVAF*LDCSAL Trigger: GAGAGCAGAGCAGTCCAGCCAGAAGGCGACCCTGCT...CCTGCCTCTAGCTACAGAGTGGTAGTGTGTCAGGGATGTCCCACCATGCTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR TCA 90 bp | CACTACCACTCTGTAGCTAGAGGCAGGAAGACTGGGAGTTCAAGGCCAGTCTGGAAGGCCTCCGGTCTTTaGGTCTGTGCAGCCCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: HYHSVARGRKTGSSRPVWKASGL*VCAAQG Trigger: ACCCTGGGCTGCACAGACTCAAAGACCGGAGGCCTT...CCAGACTGGCCTTGAACTCCCAGTCTTCCTGCCTCTAGCTACAGAGTGGTAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR GCA 90 bp | CTAGCCTCAGGTTCAGGCAGATGCATCACAAATTCGGAGACCAGTCTGGGCTGTGGGCTGGGTGCATCCTaGTGGGCTCTGCTACTTGGG | + |
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Preference number: 4 (lower is better) Translates to: LASGSGRCITNSETSLGCGLGAS*WALLLG Trigger: CCCAAGTAGCAGAGCCCAGCAGGATGCACCCAGCCC...ACAGCCCAGACTGGTCTCCGAATTTGTGATGCATCTGCCTGAACCTGAGGCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR CCA 90 bp | CATACAAAGTTCTGCCCAGCATGGTGGGACATCCCTGACACACTACCACTCTGTGGGTCGCCTTCTGGCTaGACTGCTCTGCTCTCCCGC | + |
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Preference number: 4 (lower is better) Translates to: HTKFCPAWWDIPDTLPLCGSPSG*TALLSR Trigger: GCGGGAGAGCAGAGCAGTCCAGCCAGAAGGCGACCC...ACAGAGTGGTAGTGTGTCAGGGATGTCCCACCATGCTGGGCAGAACTTTGTATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR TCA 90 bp | CATCTGTTGAAGAAACAGCACATCACTGAGAGGAGGAGGTGGCACAACATGGAGGGACACACTCAGCCCTaGAGGCACAGCAGGGTCGCC | + |
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Preference number: 4 (lower is better) Translates to: HLLKKQHITERRRWHNMEGHTQP*RHSRVA Trigger: GGCGACCCTGCTGTGCCTTCAGGGCTGAGTGTGTCC...CTCCATGTTGTGCCACCTCCTCCTCTCAGTGATGTGCTGTTTCTTCAACAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR GCA 90 bp | GTTCAAGGCCAGTCTGGGCTACATGGGACCAGGCCTCAAAAACCAACACCCACACCGCTCTGTAGGGTATaGCAAGCTGACTCTGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VQGQSGLHGTRPQKPTPTPLCRV*QADSAS Trigger: GGAGGCAGAGTCAGCTTGGCATACCCTACAGAGCGG...TGTGGGTGTTGGTTTTTGAGGCCTGGTCCCATGTAGCCCAGACTGGCCTTGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR GCA 90 bp | AGAGGAGGAGGTGGCACAACATGGAGTGGCCGCAGGCTGGTGGGTGAGGATGGAGAGGGCTCCTGCCTCTaGATTTTCAGACTCTCTAAA | + |
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Preference number: 4 (lower is better) Translates to: RGGGGTTWSGRRLVGEDGEGSCL*IFRLSK Trigger: TTTAGAGAGTCTGAAAATGCAGAGGCAGGAGCCCTC...TCCATCCTCACCCACCAGCCTGCGGCCACTCCATGTTGTGCCACCTCCTCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR CCA 90 bp | CATACAAAGTTCTGCCCAGCATGGTGGGACATCCCTGACACACTACCACTCTGTCACAGACTCCTGGGCTaGGTGCATCCTGCTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: HTKFCPAWWDIPDTLPLCHRLLG*VHPAGL Trigger: GAGCCCAGCAGGATGCACCCAGCCCAGGAGTCTGTG...ACAGAGTGGTAGTGTGTCAGGGATGTCCCACCATGCTGGGCAGAACTTTGTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR CCA 90 bp | CTAGCCTCAGGTTCAGGCAGATGCATCACAAATTCGGAGACCAGTCTGGGCTGTTCTGCCAGAAGGACATaGCTGGGACTGGCCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: LASGSGRCITNSETSLGCSARRT*LGLACW Trigger: CCAGCAGGCCAGTCCCAGCCATGTCCTTCTGGCAGA...ACAGCCCAGACTGGTCTCCGAATTTGTGATGCATCTGCCTGAACCTGAGGCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR TCA 90 bp | AGAGGAGGAGGTGGCACAACATGGAGTGGCCGCAGGCTGGTGGGTGAGGATGGATGGTCTCAGAAGAGCTaGGGTACTTCTATTTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: RGGGGTTWSGRRLVGEDGWSQKS*GTSILW Trigger: CCACAAAATAGAAGTACCTCAGCTCTTCTGAGACCA...TCCATCCTCACCCACCAGCCTGCGGCCACTCCATGTTGTGCCACCTCCTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR TCA 90 bp | GCTAGAGGCAGGAAGACTGGGAGTTCAAGGCCAGTCTGGGCTACATGGGACCAGATCTGCTCCTGTCCCTaGGACAATACTTCCTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: ARGRKTGSSRPVWATWDQICSCP*DNTSWY Trigger: GTACCAGGAAGTATTGTCTCAGGGACAGGAGCAGAT...CTGGTCCCATGTAGCCCAGACTGGCCTTGAACTCCCAGTCTTCCTGCCTCTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR CCA 90 bp | CTAGCCTCAGGTTCAGGCAGATGCATCACAAATTCGGAGACCAGTCTGGGCTGTACCCAGGGACATCTGTaGGCAAAGCCACTGTTCGGG | + |
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Preference number: 4 (lower is better) Translates to: LASGSGRCITNSETSLGCTQGHL*AKPLFG Trigger: CCCGAACAGTGGCTTTGCCCACAGATGTCCCTGGGT...ACAGCCCAGACTGGTCTCCGAATTTGTGATGCATCTGCCTGAACCTGAGGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR CCA 90 bp | CACTACCACTCTGTAGCTAGAGGCAGGAAGACTGGGAGTTCAAGGCCAGTCTGGGAAAACACAGACTCCTaGGCTGGGTGCATCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: HYHSVARGRKTGSSRPVWENTDS*AGCILL Trigger: CAGCAGGATGCACCCAGCCCAGGAGTCTGTGTTTTC...CCAGACTGGCCTTGAACTCCCAGTCTTCCTGCCTCTAGCTACAGAGTGGTAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR CCA 90 bp | CATACAAAGTTCTGCCCAGCATGGTGGGACATCCCTGACACACTACCACTCTGTCCAGAAGGACATGGCTaGGACTGGCCTGCTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: HTKFCPAWWDIPDTLPLCPEGHG*DWPAGH Trigger: ATGGCCAGCAGGCCAGTCCCAGCCATGTCCTTCTGG...ACAGAGTGGTAGTGTGTCAGGGATGTCCCACCATGCTGGGCAGAACTTTGTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR CCA 90 bp | CACTCTGTAGCTAGAGGCAGGAAGACTGGGAGTTCAAGGCCAGTCTGGGCTACACACAGTGTTATGGAGTaGAACGGCTGCAGCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: HSVARGRKTGSSRPVWATHSVME*NGCSLC Trigger: GCAGAGGCTGCAGCCGTTCCACTCCATAACACTGTG...TGTAGCCCAGACTGGCCTTGAACTCCCAGTCTTCCTGCCTCTAGCTACAGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR CCA 90 bp | CACTCTGTAGCTAGAGGCAGGAAGACTGGGAGTTCAAGGCCAGTCTGGGCTACAACAGGCACAGTGTTATaGAGTGGAACGGCTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: HSVARGRKTGSSRPVWATTGTVL*SGTAAA Trigger: GGCTGCAGCCGTTCCACTCCATAACACTGTGCCTGT...TGTAGCCCAGACTGGCCTTGAACTCCCAGTCTTCCTGCCTCTAGCTACAGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR GCA 90 bp | CTAGCCTCAGGTTCAGGCAGATGCATCACAAATTCGGAGACCAGTCTGGGCTGTAGACACACACACCCTTaGTGGGGCTTCTCCCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: LASGSGRCITNSETSLGCRHTHP*WGFSQV Trigger: TACCTGGGAGAAGCCCCAGCAAGGGTGTGTGTGTCT...ACAGCCCAGACTGGTCTCCGAATTTGTGATGCATCTGCCTGAACCTGAGGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR GCA 90 bp | CATCTGTTGAAGAAACAGCACATCACTGAGAGGAGGAGGTGGCACAACATGGAGAGAGTTCTCGCCGGCTaGAGGGTCAGAGCCCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: HLLKKQHITERRRWHNMERVLAG*RVRALA Trigger: AGCAAGGGCTCTGACCCTGCAGCCGGCGAGAACTCT...CTCCATGTTGTGCCACCTCCTCCTCTCAGTGATGTGCTGTTTCTTCAACAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR GCA 90 bp | CATCTGTTGAAGAAACAGCACATCACTGAGAGGAGGAGGTGGCACAACATGGAGAACGGCTGCAGCCTCTaGCAGAAGGACATGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: HLLKKQHITERRRWHNMENGCSL*QKDMAG Trigger: CCCAGCCATGTCCTTCTGGCAGAGGCTGCAGCCGTT...CTCCATGTTGTGCCACCTCCTCCTCTCAGTGATGTGCTGTTTCTTCAACAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR TCA 90 bp | CATACAAAGTTCTGCCCAGCATGGTGGGACATCCCTGACACACTACCACTCTGTCCACCTGGCCCAGGATaGAGAACTGGTTCTGGCATA | + |
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Preference number: 4 (lower is better) Translates to: HTKFCPAWWDIPDTLPLCPPGPG*RTGSGI Trigger: TATGCCAGAACCAGTTCTTCATCCTGGGCCAGGTGG...ACAGAGTGGTAGTGTGTCAGGGATGTCCCACCATGCTGGGCAGAACTTTGTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR GCA 90 bp | CATCTGTTGAAGAAACAGCACATCACTGAGAGGAGGAGGTGGCACAACATGGAGATGGAGTGGAACGGCTaGAGCCTCTGCCAGAAGGAC | + |
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Preference number: 4 (lower is better) Translates to: HLLKKQHITERRRWHNMEMEWNG*SLCQKD Trigger: GTCCTTCTGGCAGAGGCTGCAGCCGTTCCACTCCAT...CTCCATGTTGTGCCACCTCCTCCTCTCAGTGATGTGCTGTTTCTTCAACAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR TCA 90 bp | GCCCAGCATGGTGGGACATCCCTGACACACTACCACTCTGTAGCTAGAGGCAGGTGCATTGTTCTTTCCTaGAGTTTGGTGTCACCAGAT | + |
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Preference number: 4 (lower is better) Translates to: AQHGGTSLTHYHSVARGRCIVLS*SLVSPD Trigger: ATCTGGTGACACCAAACTTCAGGAAAGAACAATGCA...CCTGCCTCTAGCTACAGAGTGGTAGTGTGTCAGGGATGTCCCACCATGCTGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR TCA 90 bp | CACTACCACTCTGTAGCTAGAGGCAGGAAGACTGGGAGTTCAAGGCCAGTCTGGCTTCTCCCAGGTAGCTaGCTTTGTCTTGCTGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: HYHSVARGRKTGSSRPVWLLPGS*LCLAVL Trigger: CAAAACAGCAAGACAAAGTCAGCTACCTGGGAGAAG...CCAGACTGGCCTTGAACTCCCAGTCTTCCTGCCTCTAGCTACAGAGTGGTAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR TCA 90 bp | CTAGCCTCAGGTTCAGGCAGATGCATCACAAATTCGGAGACCAGTCTGGGCTGTTCCTCAGGAACTCTGTaGTCCCTAATGACCTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LASGSGRCITNSETSLGCSSGTL*SLMTWQ Trigger: TTGCCAGGTCATTAGGGATCACAGAGTTCCTGAGGA...ACAGCCCAGACTGGTCTCCGAATTTGTGATGCATCTGCCTGAACCTGAGGCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR CCA 90 bp | CTAGCCTCAGGTTCAGGCAGATGCATCACAAATTCGGAGACCAGTCTGGGCTGTTTCAAAGGGACTGGATaGAGGTCTGGCAGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LASGSGRCITNSETSLGCFKGTG*RSGSIF Trigger: GAAGATGCTGCCAGACCTCCATCCAGTCCCTTTGAA...ACAGCCCAGACTGGTCTCCGAATTTGTGATGCATCTGCCTGAACCTGAGGCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR TCA 90 bp | CACTACCACTCTGTAGCTAGAGGCAGGAAGACTGGGAGTTCAAGGCCAGTCTGGAAAGAGCTGACCCACTaGCATCCTGAAATAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HYHSVARGRKTGSSRPVWKELTH*HPEIEE Trigger: CTCTTCTATTTCAGGATGTCAGTGGGTCAGCTCTTT...CCAGACTGGCCTTGAACTCCCAGTCTTCCTGCCTCTAGCTACAGAGTGGTAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR GCA 90 bp | CATACAAAGTTCTGCCCAGCATGGTGGGACATCCCTGACACACTACCACTCTGTTATCACAAACACTGTTaGTCTTCCAGACGGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTKFCPAWWDIPDTLPLCYHKHC*SSRRPQ Trigger: CTGGGGCCGTCTGGAAGAGCAACAGTGTTTGTGATA...ACAGAGTGGTAGTGTGTCAGGGATGTCCCACCATGCTGGGCAGAACTTTGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR CCA 90 bp | ACGACAGCCATCAAACTCTATCACTACATAAGAGGGTCTTCATCTGCCACAGAAGGACATGGCTGGGACTaGCCTGCTGGCCATCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TTAIKLYHYIRGSSSATEGHGWD*PAGHQG Trigger: TCCTTGATGGCCAGCAGGCCAGTCCCAGCCATGTCC...TTCTGTGGCAGATGAAGACCCTCTTATGTAGTGATAGAGTTTGATGGCTGTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR TCA 90 bp | CATCTGTTGAAGAAACAGCACATCACTGAGAGGAGGAGGTGGCACAACATGGAGTTTGTCTTGCTGTTTTaGGTTGGATGGTGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HLLKKQHITERRRWHNMEFVLLF*VGWWPG Trigger: CCCTGGCCACCATCCAACTCAAAACAGCAAGACAAA...CTCCATGTTGTGCCACCTCCTCCTCTCAGTGATGTGCTGTTTCTTCAACAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR GCA 90 bp | CATGGTGGGACATCCCTGACACACTACCACTCTGTAGCTAGAGGCAGGAAGACTTTCAAAGTCATCAGATaGCATCACCAGAAGCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: HGGTSLTHYHSVARGRKTFKVIR*HHQKPR Trigger: TCGTGGCTTCTGGTGATGGCATCTGATGACTTTGAA...AGTCTTCCTGCCTCTAGCTACAGAGTGGTAGTGTGTCAGGGATGTCCCACCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR GCA 90 bp | CATCTGTTGAAGAAACAGCACATCACTGAGAGGAGGAGGTGGCACAACATGGAGCATCCTGCTGGGCTCTaGTACTTGGGAATAAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLLKKQHITERRRWHNMEHPAGL*YLGIKS Trigger: GCTCTTTATTCCCAAGTAGCAGAGCCCAGCAGGATG...CTCCATGTTGTGCCACCTCCTCCTCTCAGTGATGTGCTGTTTCTTCAACAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR CCA 90 bp | CTAGCCTCAGGTTCAGGCAGATGCATCACAAATTCGGAGACCAGTCTGGGCTGTGTGCTGACTTCTGCCTaGCTTTCCCAATTTCGATTT | + |
|
Preference number: 4 (lower is better) Translates to: LASGSGRCITNSETSLGCVLTSA*LSQFRF Trigger: AAATCGAAATTGGGAAAGCCAGGCAGAAGTCAGCAC...ACAGCCCAGACTGGTCTCCGAATTTGTGATGCATCTGCCTGAACCTGAGGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR CCA 90 bp | ACGACAGCCATCAAACTCTATCACTACATAAGAGGGTCTTCATCTGCCACAGAACCTGCTGGCATCCATTaGCAGAGGGAGGATACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTAIKLYHYIRGSSSATEPAGIH*QREDTQ Trigger: CTGGGTATCCTCCCTCTGCCAATGGATGCCAGCAGG...TTCTGTGGCAGATGAAGACCCTCTTATGTAGTGATAGAGTTTGATGGCTGTCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
||
| CDS-3UTR CCA 90 bp | GCCCAGCATGGTGGGACATCCCTGACACACTACCACTCTGTAGCTAGAGGCAGGAGATACTATGGTACTTaGATAGGACAAAATAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: AQHGGTSLTHYHSVARGRRYYGT*IGQNKP Trigger: GGGTTTATTTTGTCCTATCCAAGTACCATAGTATCT...CCTGCCTCTAGCTACAGAGTGGTAGTGTGTCAGGGATGTCCCACCATGCTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR GCA 90 bp | ACGACAGCCATCAAACTCTATCACTACATAAGAGGGTCTTCATCTGCCACAGAATCACTGAGAGCACTCTaGCTCCACAGTAAGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TTAIKLYHYIRGSSSATESLRAL*LHSKEG Trigger: GCCTTCCTTACTGTGGAGGCAGAGTGCTCTCAGTGA...TTCTGTGGCAGATGAAGACCCTCTTATGTAGTGATAGAGTTTGATGGCTGTCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR CCA 90 bp | CACTCATTCATACACACGCATTCTCCTTCTCTCTCTCTCTCTTTCTCTTTCTCTCCGCTTGCAGTCTCGTaGGCCTTGGCTCTCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HSFIHTHSPSLSLSFSFSPLAVS*ALALFK Trigger: TTTGAAGAGAGCCAAGGCCCACGAGACTGCAAGCGG...AGAGAAAGAGAAAGAGAGAGAGAGAGAAGGAGAATGCGTGTGTATGAATGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR CCA 90 bp | ACGACAGCCATCAAACTCTATCACTACATAAGAGGGTCTTCATCTGCCACAGAACCCAGGATGAAGAACTaGTTCTGGCATAATCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TTAIKLYHYIRGSSSATEPRMKN*FWHNLG Trigger: TCCAAGATTATGCCAGAACCAGTTCTTCATCCTGGG...TTCTGTGGCAGATGAAGACCCTCTTATGTAGTGATAGAGTTTGATGGCTGTCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR CCA 90 bp | ACTGCCAAAACAAGTAGCTTTGTAAGTTTTCTAGCTGAATCCAGAGGTACAGAGATCCTAGAGAGGGGTTaGCTTATGTCTCCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TAKTSSFVSFLAESRGTEILERG*LMSPAS Trigger: GGAAGCTGGAGACATAAGCCAACCCCTCTCTAGGAT...CTCTGTACCTCTGGATTCAGCTAGAAAACTTACAAAGCTACTTGTTTTGGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR CCA 90 bp | ACGACAGCCATCAAACTCTATCACTACATAAGAGGGTCTTCATCTGCCACAGAACTTCCTGGTACACATTaGAAATATCAAACGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TTAIKLYHYIRGSSSATELPGTH*KYQTPG Trigger: CCCTGGCGTTTGATATTTCCAATGTGTACCAGGAAG...TTCTGTGGCAGATGAAGACCCTCTTATGTAGTGATAGAGTTTGATGGCTGTCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR TCA 90 bp | ACTGCCAAAACAAGTAGCTTTGTAAGTTTTCTAGCTGAATCCAGAGGTACAGAGGACCCACTGACATCCTaGAATAGAAGAGTAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TAKTSSFVSFLAESRGTEDPLTS*NRRVGS Trigger: AGACCCTACTCTTCTATTTCAGGATGTCAGTGGGTC...CTCTGTACCTCTGGATTCAGCTAGAAAACTTACAAAGCTACTTGTTTTGGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR GCA 90 bp | ACTGCCAAAACAAGTAGCTTTGTAAGTTTTCTAGCTGAATCCAGAGGTACAGAGTCAGTACGTGCTGTGTaGAAGCTGGAAATCAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TAKTSSFVSFLAESRGTESVRAV*KLEINR Trigger: CCTGTTGATTTCCAGCTTGCACACAGCACGTACTGA...CTCTGTACCTCTGGATTCAGCTAGAAAACTTACAAAGCTACTTGTTTTGGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR TCA 90 bp | ACTGCCAAAACAAGTAGCTTTGTAAGTTTTCTAGCTGAATCCAGAGGTACAGAGTTGGGAATAAAGAGCTaGCCCACTGACATCCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TAKTSSFVSFLAESRGTELGIKS*PTDILK Trigger: TTTCAGGATGTCAGTGGGTCAGCTCTTTATTCCCAA...CTCTGTACCTCTGGATTCAGCTAGAAAACTTACAAAGCTACTTGTTTTGGCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS TCA 90 bp | CTTGAGCGCCTCCCGGAGCTGGGCTCCCCCGGACACACTCAGCCCTaGAGGCACAGCAGGGTCGCCTTCTGGCTGGACTGCTCTGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LERLPELGSPGHTQP*RHSRVAFWLDCSAL Trigger: GAGAGCAGAGCAGTCCAGCCAGAAGGCGACCCTGCTGTGCCTTCAGGGCTGAGTGTGTCCGGGGGAGCCCAGCTCCGGGAGGCGCTCAAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS TCA 90 bp | AGCAGCTGCTGTGGACGGTTCCGGGCCGGCAAGGCCTCCGGTCTTTaGGTCTGTGCAGCCCAGGGTCGGGCCCCCATCAGCTTTCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: SSCCGRFRAGKASGL*VCAAQGRAPISFLQ Trigger: TTGGAGAAAGCTGATGGGGGCCCGACCCTGGGCTGCACAGACTCAAAGACCGGAGGCCTTGCCGGCCCGGAACCGTCCACAGCAGCTGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS GCA 90 bp | AGGGTCGGGCCCCCATCAGCTTTCTCCAACAGCAGCACCCCAGGCTaGAGCCGGCTATGGCCTGGGTTGAGCTTACAGTGCCTCGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RVGPPSAFSNSSTPG*SRLWPGLSLQCLDS Trigger: GCTGTCGAGGCACTGTAAGCTCAACCCAGGCCATAGCCGGCTGCAGCCTGGGGTGCTGCTGTTGGAGAAAGCTGATGGGGGCCCGACCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS CCA 90 bp | TATGCCAAGCTGACTCTGCCTCCTCCACACAGAGAGCAGCTGCTGTaGACGGTTCCGGGCCGGCAAGGCCTCCGGTCTTTGAGTCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: YAKLTLPPPHREQLL*TVPGRQGLRSLSLC Trigger: GCACAGACTCAAAGACCGGAGGCCTTGCCGGCCCGGAACCGTCCACAGCAGCTGCTCTCTGTGTGGAGGAGGCAGAGTCAGCTTGGCATA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS-3UTR CAA 90 bp | AGAGGAGGAGGTGGCACAACATGGAGTGGCCGCAGGCTGGTGGGTGAGGATGGAGAGACACACACACCCTaGCTGGGGCTTCTCCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RGGGGTTWSGRRLVGEDGETHTP*LGLLPG Trigger: ACCTGGGAGAAGCCCCAGCAAGGGTGTGTGTGTCTC...TCCATCCTCACCCACCAGCCTGCGGCCACTCCATGTTGTGCCACCTCCTCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS GCA 90 bp | TCAGAGCCCTTGCTAGTGGCTAGAGCAGGTGAGGGCCCAGGCTCCTaGTGGCATCCATTGGCAGAGGGAGGATACCCAGGGACATCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SEPLLVARAGEGPGS*WHPLAEGGYPGTSV Trigger: CACAGATGTCCCTGGGTATCCTCCCTCTGCCAATGGATGCCAGCAGGAGCCTGGGCCCTCACCTGCTCTAGCCACTAGCAAGGGCTCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS TCA 90 bp | AGGTCTGGCAGCATCTTCTGTACAAACACCCGAGGAGCAGGAGGCTaGGGGGAGCGTCTAAGGAACTGCAGCTGTGACTCCGTCCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RSGSIFCTNTRGAGG*GERLRNCSCDSVLP Trigger: GGGGAGGACGGAGTCACAGCTGCAGTTCCTTAGACGCTCCCCTCAGCCTCCTGCTCCTCGGGTGTTTGTACAGAAGATGCTGCCAGACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000170060.4 ENSMUST00000221549.2 ENSMUST00000222460.2 |
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| CDS CCA 90 bp | ACAGGCAGCCGGCAGCAAGATGTTCACAGGCACAGTGTTATGGAGTaGAACGGCTGCAGCCTCTGCCAGAAGGACATGGCTGGGACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TGSRQQDVHRHSVME*NGCSLCQKDMAGTG Trigger: GCCAGTCCCAGCCATGTCCTTCTGGCAGAGGCTGCAGCCGTTCCACTCCATAACACTGTGCCTGTGAACATCTTGCTGCCGGCTGCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS-3UTR CAA 90 bp | AGAGGAGGAGGTGGCACAACATGGAGTGGCCGCAGGCTGGTGGGTGAGGATGGATCTTGCTGTTTTGAGTaGGATGGTGGCCAGGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGGGGTTWSGRRLVGEDGSCCFE*DGGQGV Trigger: CACCCCCTGGCCACCATCCAACTCAAAACAGCAAGA...TCCATCCTCACCCACCAGCCTGCGGCCACTCCATGTTGTGCCACCTCCTCCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR CAA 90 bp | GCTAGAGGCAGGAAGACTGGGAGTTCAAGGCCAGTCTGGGCTACATGGGACCAGCGGCTATGGCCTGGGTaGAGCTTACAGTGCCTCGAC | + |
|
Preference number: 5 (lower is better) Translates to: ARGRKTGSSRPVWATWDQRLWPG*SLQCLD Trigger: GTCGAGGCACTGTAAGCTCAACCCAGGCCATAGCCG...CTGGTCCCATGTAGCCCAGACTGGCCTTGAACTCCCAGTCTTCCTGCCTCTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS TCA 90 bp | GCCCTCTTCCGTACACAGCCCTTCTCCAGCCTCCCCTCCGTCTCCTaGCTAGAGCACGTAGGTGTCTCTTTCCTCCTCAGGAACTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ALFRTQPFSSLPSVS*LEHVGVSFLLRNSV Trigger: CACAGAGTTCCTGAGGAGGAAAGAGACACCTACGTGCTCTAGTCAGGAGACGGAGGGGAGGCTGGAGAAGGGCTGTGTACGGAAGAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS CCA 90 bp | CCTGCTGGCATCCATTGGCAGAGGGAGGATACCCAGGGACATCTGTaGGCAAAGCCACTGTTCGGGGCTTTTTCACTGTGGCCAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PAGIHWQREDTQGHL*AKPLFGAFSLWPAS Trigger: GGAAGCTGGCCACAGTGAAAAAGCCCCGAACAGTGGCTTTGCCCACAGATGTCCCTGGGTATCCTCCCTCTGCCAATGGATGCCAGCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS GCA 90 bp | GATGTTCACAGGCACAGTGTTATGGAGTGGAACGGCTGCAGCCTCTaGCAGAAGGACATGGCTGGGACTGGCCTGCTGGCCATCAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: DVHRHSVMEWNGCSL*QKDMAGTGLLAIKE Trigger: TTCCTTGATGGCCAGCAGGCCAGTCCCAGCCATGTCCTTCTGGCAGAGGCTGCAGCCGTTCCACTCCATAACACTGTGCCTGTGAACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS CCA 90 bp | AACGCCAGGGCTTCCCCCACCGCAGTCACAGTCTCTGGCTCTCTTTaGTCATGTGTCTCCATCCTAGAGAGGGGTTGGCTTATGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NARASPTAVTVSGSL*SCVSILERGWLMSP Trigger: TGGAGACATAAGCCAACCCCTCTCTAGGATGGAGACACATGACCAAAGAGAGCCAGAGACTGTGACTGCGGTGGGGGAAGCCCTGGCGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS CCA 90 bp | GGAAATATCAAACGCCAGGGCTTCCCCCACCGCAGTCACAGTCTCTaGCTCTCTTTGGTCATGTGTCTCCATCCTAGAGAGGGGTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GNIKRQGFPHRSHSL*LSLVMCLHPREGLA Trigger: AGCCAACCCCTCTCTAGGATGGAGACACATGACCAAAGAGAGCCAGAGACTGTGACTGCGGTGGGGGAAGCCCTGGCGTTTGATATTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS-3UTR CAA 90 bp | CTAGCCTCAGGTTCAGGCAGATGCATCACAAATTCGGAGACCAGTCTGGGCTGTGCAGTCTCGTGGGCCTaGGCTCTCTTCAAAGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LASGSGRCITNSETSLGCAVSWA*ALFKGT Trigger: AGTCCCTTTGAAGAGAGCCAAGGCCCACGAGACTGC...ACAGCCCAGACTGGTCTCCGAATTTGTGATGCATCTGCCTGAACCTGAGGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS-3UTR CAA 90 bp | GCCCAGCATGGTGGGACATCCCTGACACACTACCACTCTGTAGCTAGAGGCAGGAGTCTCTGGCTCTCTTaGGTCATGTGTCTCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: AQHGGTSLTHYHSVARGRSLWLS*VMCLHP Trigger: AGGATGGAGACACATGACCAAAGAGAGCCAGAGACT...CCTGCCTCTAGCTACAGAGTGGTAGTGTGTCAGGGATGTCCCACCATGCTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS CCA 90 bp | GTCTCTGGCTCTCTTTGGTCATGTGTCTCCATCCTAGAGAGGGGTTaGCTTATGTCTCCAGCTTCCCTTCCAACACTGGGACCCCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: VSGSLWSCVSILERG*LMSPASLPTLGPPS Trigger: TGATGGGGGTCCCAGTGTTGGAAGGGAAGCTGGAGACATAAGCCAACCCCTCTCTAGGATGGAGACACATGACCAAAGAGAGCCAGAGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS GCA 90 bp | AAGAGTAGGGTCTGCAGAGCCATTCCTAGCTTCAAAGTCATCAGATaGCATCACCAGAAGCCACGAGCCCGCAGGTGGTGCATTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KSRVCRAIPSFKVIR*HHQKPRARRWCISV Trigger: GACAGAAATGCACCACCTGCGGGCTCGTGGCTTCTGGTGATGGCATCTGATGACTTTGAAGCTAGGAATGGCTCTGCAGACCCTACTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS CCA 90 bp | TTCAAAGTCATCAGATGCCATCACCAGAAGCCACGAGCCCGCAGGTaGTGCATTTCTGTCACTAGCAGGAACCATCTCCCAACAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FKVIRCHHQKPRARR*CISVTSRNHLPTAS Trigger: GGAAGCTGTTGGGAGATGGTTCCTGCTAGTGACAGAAATGCACCACCTGCGGGCTCGTGGCTTCTGGTGATGGCATCTGATGACTTTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS-3UTR CAA 90 bp | CACTACCACTCTGTAGCTAGAGGCAGGAAGACTGGGAGTTCAAGGCCAGTCTGGATATCACAAACACTGTaGCTCTTCCAGACGGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HYHSVARGRKTGSSRPVWISQTL*LFQTAP Trigger: TGGGGCCGTCTGGAAGAGCAACAGTGTTTGTGATAT...CCAGACTGGCCTTGAACTCCCAGTCTTCCTGCCTCTAGCTACAGAGTGGTAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS CCA 90 bp | CTCCACAGTAAGGAAGGCTTCCATAGCTTCAAGAGCAACACCTTCTaGCGGGCCAAACCTCAGGATAGAACCCCTTGCATTGGTCACAAC | + |
|
Preference number: 5 (lower is better) Translates to: LHSKEGFHSFKSNTF*RAKPQDRTPCIGHN Trigger: GTTGTGACCAATGCAAGGGGTTCTATCCTGAGGTTTGGCCCGCCAGAAGGTGTTGCTCTTGAAGCTATGGAAGCCTTCCTTACTGTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
||
| CDS-3UTR CAA 90 bp | ACGACAGCCATCAAACTCTATCACTACATAAGAGGGTCTTCATCTGCCACAGAACAAGGCCTCCGGTCTTaGAGTCTGTGCAGCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TTAIKLYHYIRGSSSATEQGLRS*SLCSPG Trigger: CCCTGGGCTGCACAGACTCAAAGACCGGAGGCCTTG...TTCTGTGGCAGATGAAGACCCTCTTATGTAGTGATAGAGTTTGATGGCTGTCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
||
| CDS TCA 90 bp | CTATTTTGTGGTTCAGGTACCAGTGTTTCTTCAACTTCGACAGGCTaGCCGCTCTGTAGGGTATGCCAAGCTGACTCTGCCTCCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LFCGSGTSVSSTSTG*PLCRVCQADSASST Trigger: TGTGGAGGAGGCAGAGTCAGCTTGGCATACCCTACAGAGCGGTCAGCCTGTCGAAGTTGAAGAAACACTGGTACCTGAACCACAAAATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
||
| CDS-3UTR CAA 90 bp | CACTCTGTAGCTAGAGGCAGGAAGACTGGGAGTTCAAGGCCAGTCTGGGCTACACCCTTAGAGATTTCTTaGACTTCTCAGTACGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HSVARGRKTGSSRPVWATPLEIS*TSQYVL Trigger: CAGCACGTACTGAGAAGTCAAAGAAATCTCTAAGGG...TGTAGCCCAGACTGGCCTTGAACTCCCAGTCTTCCTGCCTCTAGCTACAGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
||
| CDS CCA 90 bp | GTTGCTCTTCCAGACGGCCCCAGAATCCTGATACATAGTGTGTTCTaGAATATTCTCTTCAGAAAACACAGACTCCTGGGCTGGGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VALPDGPRILIHSVF*NILFRKHRLLGWVH Trigger: ATGCACCCAGCCCAGGAGTCTGTGTTTTCTGAAGAGAATATTCCAGAACACACTATGTATCAGGATTCTGGGGCCGTCTGGAAGAGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
||
| CDS-3UTR CAA 90 bp | AGGCAGATGCATCACAAATTCGGAGACCAGTCTGGGCTGTGCCAAACCCTGCTTGTGTCACCAGATACCTaGACACAAATAGCTTCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RQMHHKFGDQSGLCQTLLVSPDT*TQIASS Trigger: ACTTGAAGCTATTTGTGTCAAGGTATCTGGTGACAC...AAGCAGGGTTTGGCACAGCCCAGACTGGTCTCCGAATTTGTGATGCATCTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS GCA 90 bp | GTTCTTACCCTTAGAGATTTCTTTGACTTCTCAGTACGTGCTGTGTaGAAGCTGGAAATCAACAGGCTAGATGGCACAGCTGCAACTGCG | + |
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Preference number: 5 (lower is better) Translates to: VLTLRDFFDFSVRAV*KLEINRLDGTAATA Trigger: CGCAGTTGCAGCTGTGCCATCTAGCCTGTTGATTTCCAGCTTGCACACAGCACGTACTGAGAAGTCAAAGAAATCTCTAAGGGTAAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS-3UTR CAA 90 bp | CATACAAAGTTCTGCCCAGCATGGTGGGACATCCCTGACACACTACCACTCTGTAACTCTTCAAACTCCTaGTACACAGCAGGAAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: HTKFCPAWWDIPDTLPLCNSSNS*YTAGKK Trigger: TTTCTTTCCTGCTGTGTACAAGGAGTTTGAAGAGTT...ACAGAGTGGTAGTGTGTCAGGGATGTCCCACCATGCTGGGCAGAACTTTGTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS TCA 90 bp | GGCATATCACAAACACTGTTGCTCTTCCAGACGGCCCCAGAATCCTaGTACATAGTGTGTTCTGGAATATTCTCTTCAGAAAACACAGAC | + |
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Preference number: 5 (lower is better) Translates to: GISQTLLLFQTAPES*YIVCSGIFSSENTD Trigger: GTCTGTGTTTTCTGAAGAGAATATTCCAGAACACACTATGTATCAGGATTCTGGGGCCGTCTGGAAGAGCAACAGTGTTTGTGATATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS TCA 90 bp | AAAATAAACCCATTGGAAGTCCGAATAAAAATCTGCTCCTGTCCCTaGGACAATACTTCCTGGTACACATTGGAAATATCAAACGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: KINPLEVRIKICSCP*DNTSWYTLEISNAR Trigger: CCTGGCGTTTGATATTTCCAATGTGTACCAGGAAGTATTGTCTCAGGGACAGGAGCAGATTTTTATTCGGACTTCCAATGGGTTTATTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS CCA 72 bp | TGCTCGGGGTCCAGCGGAGCCAAGCGCACGGCGCCGTaGCTCCGGCCGGGAAGAGTCGAGCCACTGTCGCCG | + |
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Preference number: 6 (lower is better) Translates to: CSGSSGAKRTAP*LRPGRVEPLSP Trigger: CGGCGACAGTGGCTCGACTCTTCCCGGCCGGAGCCACGGCGCCGTGCGCTTGGCTCCGCTGGACCCCGAGCA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170060.4 ENSMUST00000221549.2 ENSMUST00000222460.2 |
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| CDS GCA 72 bp | GGCAGCACCAATTCCACCAGCTCCTCCCGGCCACACTaGTTGAGCGCCTCCCGGAGCTGGGCTCCCCCGGAC | + |
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Preference number: 6 (lower is better) Translates to: GSTNSTSSSRPH*LSASRSWAPPD Trigger: GTCCGGGGGAGCCCAGCTCCGGGAGGCGCTCAAGCAGTGTGGCCGGGAGGAGCTGGTGGAATTGGTGCTGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS TCA 72 bp | TGTGGACGGTTCCGGGCCGGCAAGGCCTCCGGTCTTTaGGTCTGTGCAGCCCAGGGTCGGGCCCCCATCAGC | + |
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Preference number: 6 (lower is better) Translates to: CGRFRAGKASGL*VCAAQGRAPIS Trigger: GCTGATGGGGGCCCGACCCTGGGCTGCACAGACTCAAAGACCGGAGGCCTTGCCGGCCCGGAACCGTCCACA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS TCA 72 bp | CTCCCGGAGCTGGGCTCCCCCGGACACACTCAGCCCTaGAGGCACAGCAGGGTCGCCTTCTGGCTGGACTGC | + |
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Preference number: 6 (lower is better) Translates to: LPELGSPGHTQP*RHSRVAFWLDC Trigger: GCAGTCCAGCCAGAAGGCGACCCTGCTGTGCCTTCAGGGCTGAGTGTGTCCGGGGGAGCCCAGCTCCGGGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS CAA 90 bp | GAGCAGCTGCTGTGGACGGTTCCGGGCCGGCAAGGCCTCCGGTCTTaGAGTCTGTGCAGCCCAGGGTCGGGCCCCCATCAGCTTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: EQLLWTVPGRQGLRS*SLCSPGSGPHQLSP Trigger: TGGAGAAAGCTGATGGGGGCCCGACCCTGGGCTGCACAGACTCAAAGACCGGAGGCCTTGCCGGCCCGGAACCGTCCACAGCAGCTGCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS CAA 72 bp | CAGAGAGAGTTCTCGCCGGCTGCAGGGTCAGAGCCCTaGCTAGTGGCTAGAGCAGGTGAGGGCCCAGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: QREFSPAAGSEP*LVARAGEGPGS Trigger: GGAGCCTGGGCCCTCACCTGCTCTAGCCACTAGCAAGGGCTCTGACCCTGCAGCCGGCGAGAACTCTCTCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS GCA 72 bp | GGCTGCCACCGGGCTGAGAGCGATACCACACCCGCTTaGAGTCTCGTGGGCCTTGGCTCTCTTCAAAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: GCHRAESDTTPA*SLVGLGSLQRD Trigger: GTCCCTTTGAAGAGAGCCAAGGCCCACGAGACTGCAAGCGGGTGTGGTATCGCTCTCAGCCCGGTGGCAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS CAA 72 bp | AGAGCAGGTGAGGGCCCAGGCTCCTGCTGGCATCCATaGGCAGAGGGAGGATACCCAGGGACATCTGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: RAGEGPGSCWHP*AEGGYPGTSVG Trigger: GCCCACAGATGTCCCTGGGTATCCTCCCTCTGCCAATGGATGCCAGCAGGAGCCTGGGCCCTCACCTGCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS GCA 72 bp | GCTGGAAATCAACAGGCTAGATGGCACAGCTGCAACTaGGCGTGTACCCGAGGCTGCCACCGGGCTGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: AGNQQARWHSCN*ACTRGCHRAES Trigger: GCTCTCAGCCCGGTGGCAGCCTCGGGTACACGCGCAGTTGCAGCTGTGCCATCTAGCCTGTTGATTTCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS GCA 72 bp | GTGCAAGCTGGAAATCAACAGGCTAGATGGCACAGCTaGAACTGCGCGTGTACCCGAGGCTGCCACCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: VQAGNQQARWHS*NCACTRGCHRA Trigger: AGCCCGGTGGCAGCCTCGGGTACACGCGCAGTTGCAGCTGTGCCATCTAGCCTGTTGATTTCCAGCTTGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS GCA 72 bp | GGCAGCACCAATTCCACCAGCTCCTCCCGGCCACACTaGTTGAGCGCCTGTAGGGTATGCCAAGCTGACTCT | + |
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Preference number: 6 (lower is better) Translates to: GSTNSTSSSRPH*LSACRVCQADS Trigger: AGAGTCAGCTTGGCATACCCTACAGGCGCTCAAGCAGTGTGGCCGGGAGGAGCTGGTGGAATTGGTGCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222460.2 |
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| CDS CAA 72 bp | GGCTTCCCCCACCGCAGTCACAGTCTCTGGCTCTCTTaGGTCATGTGTCTCCATCCTAGAGAGGGGTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: GFPHRSHSLWLS*VMCLHPREGLA Trigger: AGCCAACCCCTCTCTAGGATGGAGACACATGACCAAAGAGAGCCAGAGACTGTGACTGCGGTGGGGGAAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS CAA 90 bp | AAACGCCAGGGCTTCCCCCACCGCAGTCACAGTCTCTGGCTCTCTTaGGTCATGTGTCTCCATCCTAGAGAGGGGTTGGCTTATGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: KRQGFPHRSHSLWLS*VMCLHPREGLAYVS Trigger: GGAGACATAAGCCAACCCCTCTCTAGGATGGAGACACATGACCAAAGAGAGCCAGAGACTGTGACTGCGGTGGGGGAAGCCCTGGCGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS TCA 72 bp | AGCATCTTCTGTACAAACACCCGAGGAGCAGGAGGCTaGGGGGAGCGTCTAAGGAACTGCAGCTGTGACTCC | + |
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Preference number: 6 (lower is better) Translates to: SIFCTNTRGAGG*GERLRNCSCDS Trigger: GGAGTCACAGCTGCAGTTCCTTAGACGCTCCCCTCAGCCTCCTGCTCCTCGGGTGTTTGTACAGAAGATGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000170060.4 ENSMUST00000221549.2 ENSMUST00000222460.2 |
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| CDS GCA 72 bp | GTCTGCAGAGCCATTCCTAGCTTCAAAGTCATCAGATaGCATCACCAGAAGCCACGAGCCCGCAGGTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: VCRAIPSFKVIR*HHQKPRARRWC Trigger: GCACCACCTGCGGGCTCGTGGCTTCTGGTGATGGCATCTGATGACTTTGAAGCTAGGAATGGCTCTGCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS CCA 72 bp | CGGCAGCAAGATGTTCACAGGCACAGTGTTATGGAGTaGAACGGCTGCAGCCTCTGCCAGAAGGACATGGCT | + |
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Preference number: 6 (lower is better) Translates to: RQQDVHRHSVME*NGCSLCQKDMA Trigger: AGCCATGTCCTTCTGGCAGAGGCTGCAGCCGTTCCACTCCATAACACTGTGCCTGTGAACATCTTGCTGCCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS CCA 72 bp | GCTTCCCCCACCGCAGTCACAGTCTCTGGCTCTCTTTaGTCATGTGTCTCCATCCTAGAGAGGGGTTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: ASPTAVTVSGSL*SCVSILERGWL Trigger: AAGCCAACCCCTCTCTAGGATGGAGACACATGACCAAAGAGAGCCAGAGACTGTGACTGCGGTGGGGGAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS CCA 72 bp | AAACGCCAGGGCTTCCCCCACCGCAGTCACAGTCTCTaGCTCTCTTTGGTCATGTGTCTCCATCCTAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: KRQGFPHRSHSL*LSLVMCLHPRE Trigger: CTCTCTAGGATGGAGACACATGACCAAAGAGAGCCAGAGACTGTGACTGCGGTGGGGGAAGCCCTGGCGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS CCA 72 bp | ATCCATTGGCAGAGGGAGGATACCCAGGGACATCTGTaGGCAAAGCCACTGTTCGGGGCTTTTTCACTGTGG | + |
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Preference number: 6 (lower is better) Translates to: IHWQREDTQGHL*AKPLFGAFSLW Trigger: CCACAGTGAAAAAGCCCCGAACAGTGGCTTTGCCCACAGATGTCCCTGGGTATCCTCCCTCTGCCAATGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS CCA 72 bp | ATCAGATGCCATCACCAGAAGCCACGAGCCCGCAGGTaGTGCATTTCTGTCACTAGCAGGAACCATCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: IRCHHQKPRARR*CISVTSRNHLP Trigger: TGGGAGATGGTTCCTGCTAGTGACAGAAATGCACCACCTGCGGGCTCGTGGCTTCTGGTGATGGCATCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS CCA 72 bp | CAGAAAACACAGACTCCTGGGCTGGGTGCATCCTGCTaGGCTCTGCTACTTGGGAATAAAGAGCTGACCCAC | + |
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Preference number: 6 (lower is better) Translates to: QKTQTPGLGASC*ALLLGNKELTH Trigger: GTGGGTCAGCTCTTTATTCCCAAGTAGCAGAGCCCAGCAGGATGCACCCAGCCCAGGAGTCTGTGTTTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS CAA 90 bp | AGTCTCTGGCTCTCTTTGGTCATGTGTCTCCATCCTAGAGAGGGGTaGGCTTATGTCTCCAGCTTCCCTTCCAACACTGGGACCCCCATC | + |
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Preference number: 6 (lower is better) Translates to: SLWLSLVMCLHPREG*AYVSSFPSNTGTPI Trigger: GATGGGGGTCCCAGTGTTGGAAGGGAAGCTGGAGACATAAGCCAACCCCTCTCTAGGATGGAGACACATGACCAAAGAGAGCCAGAGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS TCA 72 bp | ACACACACACCCTTGCTGGGGCTTCTCCCAGGTAGCTaGCTTTGTCTTGCTGTTTTGAGTTGGATGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: THTPLLGLLPGS*LCLAVLSWMVA Trigger: GGCCACCATCCAACTCAAAACAGCAAGACAAAGTCAGCTACCTGGGAGAAGCCCCAGCAAGGGTGTGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170060.4 ENSMUST00000221549.2 ENSMUST00000222460.2 |
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| CDS CCA 72 bp | TGCAGTCTCGTGGGCCTTGGCTCTCTTCAAAGGGACTaGATGGAGGTCTGGCAGCATCTTCTGTACAAACAC | + |
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Preference number: 6 (lower is better) Translates to: CSLVGLGSLQRD*MEVWQHLLYKH Trigger: GTGTTTGTACAGAAGATGCTGCCAGACCTCCATCCAGTCCCTTTGAAGAGAGCCAAGGCCCACGAGACTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000170060.4 ENSMUST00000221549.2 ENSMUST00000222460.2 |
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| CDS TCA 72 bp | TCTCCAGGGGCTCCTGAGGGTATGCACCAGCGCTGCTaGGGTAATCCTGACACATTCTCTTCATCATGTCAT | + |
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Preference number: 6 (lower is better) Translates to: SPGAPEGMHQRC*GNPDTFSSSCH Trigger: ATGACATGATGAAGAGAATGTGTCAGGATTACCTCAGCAGCGCTGGTGCATACCCTCAGGAGCCCCTGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS TCA 72 bp | GGCTTCTCCCAGGTAGCTGACTTTGTCTTGCTGTTTTaGGTTGGATGGTGGCCAGGGGGTGCATTGTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: GFSQVADFVLLF*VGWWPGGALFF Trigger: AAAGAACAATGCACCCCCTGGCCACCATCCAACTCAAAACAGCAAGACAAAGTCAGCTACCTGGGAGAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000170060.4 ENSMUST00000221549.2 ENSMUST00000222460.2 |
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| CDS CCA 72 bp | TGTTCTGGAATATTCTCTTCAGAAAACACAGACTCCTaGGCTGGGTGCATCCTGCTGGGCTCTGCTACTTGG | + |
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Preference number: 6 (lower is better) Translates to: CSGIFSSENTDS*AGCILLGSATW Trigger: CCAAGTAGCAGAGCCCAGCAGGATGCACCCAGCCCAGGAGTCTGTGTTTTCTGAAGAGAATATTCCAGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS CCA 72 bp | AAGGAAGGCTTCCATAGCTTCAAGAGCAACACCTTCTaGCGGGCCAAACCTCAGGATAGAACCCCTTGCATT | + |
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Preference number: 6 (lower is better) Translates to: KEGFHSFKSNTF*RAKPQDRTPCI Trigger: AATGCAAGGGGTTCTATCCTGAGGTTTGGCCCGCCAGAAGGTGTTGCTCTTGAAGCTATGGAAGCCTTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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| CDS CAA 90 bp | GCCGGGATACCCGTCCAGATCGAGTTCTTACCCTTAGAGATTTCTTaGACTTCTCAGTACGTGCTGTGTGCAAGCTGGAAATCAACAGGC | + |
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Preference number: 6 (lower is better) Translates to: AGIPVQIEFLPLEIS*TSQYVLCASWKSTG Trigger: GCCTGTTGATTTCCAGCTTGCACACAGCACGTACTGAGAAGTCAAAGAAATCTCTAAGGGTAAGAACTCGATCTGGACGGGTATCCCGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS CCA 72 bp | TGGAATATTCTCTTCAGAAAACACAGACTCCTGGGCTaGGTGCATCCTGCTGGGCTCTGCTACTTGGGAATA | + |
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Preference number: 6 (lower is better) Translates to: WNILFRKHRLLG*VHPAGLCYLGI Trigger: TATTCCCAAGTAGCAGAGCCCAGCAGGATGCACCCAGCCCAGGAGTCTGTGTTTTCTGAAGAGAATATTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS GCA 72 bp | GAAGGGTTGATTAGTCTCCCTGAGGGCTCCTGCCTCTaGATTTTCAGACTCTCTAAACAACAGAGACCCAAT | + |
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Preference number: 6 (lower is better) Translates to: EGLISLPEGSCL*IFRLSKQQRPN Trigger: ATTGGGTCTCTGTTGTTTAGAGAGTCTGAAAATGCAGAGGCAGGAGCCCTCAGGGAGACTAATCAACCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS CCA 72 bp | CCAGACGGCCCCAGAATCCTGATACATAGTGTGTTCTaGAATATTCTCTTCAGAAAACACAGACTCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: PDGPRILIHSVF*NILFRKHRLLG Trigger: GCCCAGGAGTCTGTGTTTTCTGAAGAGAATATTCCAGAACACACTATGTATCAGGATTCTGGGGCCGTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS CCA 72 bp | ACTCCTTGTACACAGCAGGAAAGAAAGGCTTCGCCCTaGGACTTTTCTCTACCTTCACCAGAAGAAGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: TPCTQQERKASP*DFSLPSPEEVH Trigger: ATGAACTTCTTCTGGTGAAGGTAGAGAAAAGTCCCAGGGCGAAGCCTTTCTTTCCTGCTGTGTACAAGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS CAA 72 bp | CCCGTCCAGATCGAGTTCTTACCCTTAGAGATTTCTTaGACTTCTCAGTACGTGCTGTGTGCAAGCTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: PVQIEFLPLEIS*TSQYVLCASWK Trigger: TTTCCAGCTTGCACACAGCACGTACTGAGAAGTCAAAGAAATCTCTAAGGGTAAGAACTCGATCTGGACGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS TCA 72 bp | CAAACACTGTTGCTCTTCCAGACGGCCCCAGAATCCTaGTACATAGTGTGTTCTGGAATATTCTCTTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: QTLLLFQTAPES*YIVCSGIFSSE Trigger: TTCTGAAGAGAATATTCCAGAACACACTATGTATCAGGATTCTGGGGCCGTCTGGAAGAGCAACAGTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170060.4 ENSMUST00000222460.2 |
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| CDS TCA 72 bp | CCATTGGAAGTCCGAATAAAAATCTGCTCCTGTCCCTaGGACAATACTTCCTGGTACACATTGGAAATATCA | + |
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Preference number: 6 (lower is better) Translates to: PLEVRIKICSCP*DNTSWYTLEIS Trigger: TGATATTTCCAATGTGTACCAGGAAGTATTGTCTCAGGGACAGGAGCAGATTTTTATTCGGACTTCCAATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170060.4 |
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