Pregenerated sensors for ZFP830 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046010Ensembl transcript IDs: ENSMUST00000056677.8
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | CGCACACAGTACCATCCCCAAAGTATTACTCCTCACTaGCTTACTTTATCCCAACAATTAGGGGTATCCAAG | + |
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Preference number: 3 (lower is better) Translates to: RTQYHPQSITPH*LTLSQQLGVSK Trigger: CTTGGATACCCCTAATTGTTGGGATAAAGTAAGCCAGTGAGGAGTAATACTTTGGGGATGGTACTGTGTGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR GCA 90 bp | TCCCAACAATTAGGGGTATCCAAGGTCAGAGGAACCCAAGAACTTGGACACAGCCGGGGTGTTACACAGTaGGCAGCTCAGCTGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SQQLGVSKVRGTQELGHSRGVTQ*AAQLPQ Trigger: CTGGGGCAGCTGAGCTGCGCACTGTGTAACACCCCG...GCTGTGTCCAAGTTCTTGGGTTCCTCTGACCTTGGATACCCCTAATTGTTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR CCA 90 bp | TCCCAACAATTAGGGGTATCCAAGGTCAGAGGAACCCAAGAACTTGGACACAGCCGGACGAGGCTGAGGTaGAGGGCTGTACCTGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: SQQLGVSKVRGTQELGHSRTRLR*RAVPEV Trigger: GACCTCAGGTACAGCCCTCCACCTCAGCCTCGTCCG...GCTGTGTCCAAGTTCTTGGGTTCCTCTGACCTTGGATACCCCTAATTGTTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR TCA 90 bp | CCGCACACAGTACCATCCCCAAAGTATTACTCCTCACTGGCTTACTTTATCCCACTCCTCTTGGTGGCCTaGGGTACAGTGCCGGTCGAC | + |
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Preference number: 4 (lower is better) Translates to: PHTVPSPKYYSSLAYFIPLLLVA*GTVPVD Trigger: GTCGACCGGCACTGTACCTCAGGCCACCAAGAGGAG...TGGGATAAAGTAAGCCAGTGAGGAGTAATACTTTGGGGATGGTACTGTGTGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR GCA 90 bp | TCCCAACAATTAGGGGTATCCAAGGTCAGAGGAACCCAAGAACTTGGACACAGCAGTGCGCAGCTCAGCTaGCCCAGACGGTTGTACTTG | + |
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Preference number: 4 (lower is better) Translates to: SQQLGVSKVRGTQELGHSSAQLS*PRRLYL Trigger: CAAGTACAACCGTCTGGGGCAGCTGAGCTGCGCACT...GCTGTGTCCAAGTTCTTGGGTTCCTCTGACCTTGGATACCCCTAATTGTTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR TCA 90 bp | CCAACAATTAGGGGTATCCAAGGTCAGAGGAACCCAAGAACTTGGACACAGCACCGCCTCAGTTCTTCCTaGTTCACCACTCGCTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: PTIRGIQGQRNPRTWTQHRLSSS*FTTRFP Trigger: TGGGAAGCGAGTGGTGAATCAGGAAGAACTGAGGCG...GTGCTGTGTCCAAGTTCTTGGGTTCCTCTGACCTTGGATACCCCTAATTGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR GCA 90 bp | CCAACAATTAGGGGTATCCAAGGTCAGAGGAACCCAAGAACTTGGACACAGCACCACCTTCCGGACCTTTaGATCTACCTCAGGGTCGTC | + |
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Preference number: 4 (lower is better) Translates to: PTIRGIQGQRNPRTWTQHHLPDL*IYLRVV Trigger: GACGACCCTGAGGTAGATGCAAAGGTCCGGAAGGTG...GTGCTGTGTCCAAGTTCTTGGGTTCCTCTGACCTTGGATACCCCTAATTGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR GCA 90 bp | CCAACAATTAGGGGTATCCAAGGTCAGAGGAACCCAAGAACTTGGACACAGCACTCAATCTCTCCAATCTaGCGGTCCAACCGTCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PTIRGIQGQRNPRTWTQHSISPI*RSNRPS Trigger: GGAGGGACGGTTGGACCGGCAGATTGGAGAGATTGA...GTGCTGTGTCCAAGTTCTTGGGTTCCTCTGACCTTGGATACCCCTAATTGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR CCA 90 bp | CCGCACACAGTACCATCCCCAAAGTATTACTCCTCACTGGCTTACTTTATCCCACCTGGGTTGCTCCTTTaGCGCCTTTCAGCTCCGCTA | + |
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Preference number: 4 (lower is better) Translates to: PHTVPSPKYYSSLAYFIPPGLLL*RLSAPL Trigger: TAGCGGAGCTGAAAGGCGCCAAAGGAGCAACCCAGG...TGGGATAAAGTAAGCCAGTGAGGAGTAATACTTTGGGGATGGTACTGTGTGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR TCA 90 bp | AATAGCACCGCACACAGTACCATCCCCAAAGTATTACTCCTCACTGGCTTACTTACAGGAGCTCGCTCTTaGCCGGGGTGTTACACAGTG | + |
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Preference number: 4 (lower is better) Translates to: NSTAHSTIPKVLLLTGLLTGARS*PGCYTV Trigger: CACTGTGTAACACCCCGGTCAAGAGCGAGCTCCTGT...AAGTAAGCCAGTGAGGAGTAATACTTTGGGGATGGTACTGTGTGCGGTGCTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR CCA 90 bp | AATAGCACCGCACACAGTACCATCCCCAAAGTATTACTCCTCACTGGCTTACTTGTCCATCTGATCCTTTaGGGCATCCACCTTCCGGAC | + |
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Preference number: 4 (lower is better) Translates to: NSTAHSTIPKVLLLTGLLVHLIL*GIHLPD Trigger: GTCCGGAAGGTGGATGCCCCAAAGGATCAGATGGAC...AAGTAAGCCAGTGAGGAGTAATACTTTGGGGATGGTACTGTGTGCGGTGCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR TCA 90 bp | ATAGCACCGCACACAGTACCATCCCCAAAGTATTACTCCTCACTGGCTTACTTTCACTCTTTGTCCATCTaGTCCTTTGGGGCATCCACC | + |
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Preference number: 4 (lower is better) Translates to: IAPHTVPSPKYYSSLAYFHSLSI*SFGAST Trigger: GGTGGATGCCCCAAAGGATCAGATGGACAAAGAGTG...AAAGTAAGCCAGTGAGGAGTAATACTTTGGGGATGGTACTGTGTGCGGTGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR GCA 90 bp | AATAGCACCGCACACAGTACCATCCCCAAAGTATTACTCCTCACTGGCTTACTTCGTTTGGCAGCACATTaGTTGTTGTCTCCCTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: NSTAHSTIPKVLLLTGLLRLAAH*LLSPSE Trigger: CTCCGAGGGAGACAACAAGCAATGTGCTGCCAAACG...AAGTAAGCCAGTGAGGAGTAATACTTTGGGGATGGTACTGTGTGCGGTGCTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR TCA 90 bp | CCGCACACAGTACCATCCCCAAAGTATTACTCCTCACTGGCTTACTTTATCCCATGCCTCATAGCCTTTTaGAACTCGTCCCACTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: PHTVPSPKYYSSLAYFIPCLIAF*NSSHSL Trigger: CAAAGAGTGGGACGAGTTTCAAAAGGCTATGAGGCA...TGGGATAAAGTAAGCCAGTGAGGAGTAATACTTTGGGGATGGTACTGTGTGCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR CCA 90 bp | AATAGCACCGCACACAGTACCATCCCCAAAGTATTACTCCTCACTGGCTTACTTCCAGACGGTTGTACTTaGCGAATGGAGATTCGATCC | + |
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Preference number: 4 (lower is better) Translates to: NSTAHSTIPKVLLLTGLLPDGCT*RMEIRS Trigger: GGATCGAATCTCCATTCGCCAAGTACAACCGTCTGG...AAGTAAGCCAGTGAGGAGTAATACTTTGGGGATGGTACTGTGTGCGGTGCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR GCA 90 bp | TATGAAGAATATGTGTTTATGAGTGGCCTTCTAAAAACAACCTTCCCAAAGCGCCCCAGAACATGGGTCTaGCACAGGAGCTCGCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: YEEYVFMSGLLKTTFPKRPRTWV*HRSSLL Trigger: CAAGAGCGAGCTCCTGTGGCAGACCCATGTTCTGGG...GCGCTTTGGGAAGGTTGTTTTTAGAAGGCCACTCATAAACACATATTCTTCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR GCA 90 bp | ATAGCACCGCACACAGTACCATCCCCAAAGTATTACTCCTCACTGGCTTACTTTCATCCGGAAGATGCTTaGTGCTGTCCCTTCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: IAPHTVPSPKYYSSLAYFHPEDA*CCPFFL Trigger: AAGAAAGAAGGGACAGCAGCAAGCATCTTCCGGATG...AAAGTAAGCCAGTGAGGAGTAATACTTTGGGGATGGTACTGTGTGCGGTGCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR CCA 90 bp | TATGAAGAATATGTGTTTATGAGTGGCCTTCTAAAAACAACCTTCCCAAAGCGCTGCTTTCCCAGAACATaGGTCTGCCACAGGAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: YEEYVFMSGLLKTTFPKRCFPRT*VCHRSS Trigger: CGAGCTCCTGTGGCAGACCCATGTTCTGGGAAAGCA...GCGCTTTGGGAAGGTTGTTTTTAGAAGGCCACTCATAAACACATATTCTTCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR CCA 90 bp | TATGAAGAATATGTGTTTATGAGTGGCCTTCTAAAAACAACCTTCCCAAAGCGCAGGCCTTGGCTTTCTTaGCGTCTTGGCTCTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: YEEYVFMSGLLKTTFPKRRPWLS*RLGSPH Trigger: ATGTGGAGAGCCAAGACGCCAAGAAAGCCAAGGCCT...GCGCTTTGGGAAGGTTGTTTTTAGAAGGCCACTCATAAACACATATTCTTCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR CCA 90 bp | GCACCGCACACAGTACCATCCCCAAAGTATTACTCCTCACTGGCTTACTTTATCTTTCTGCTTTCTCAATaGACCCTGAATGAGGAACTA | + |
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Preference number: 4 (lower is better) Translates to: APHTVPSPKYYSSLAYFIFLLSQ*TLNEEL Trigger: TAGTTCCTCATTCAGGGTCCATTGAGAAAGCAGAAA...GATAAAGTAAGCCAGTGAGGAGTAATACTTTGGGGATGGTACTGTGTGCGGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR GCA 90 bp | TATGAAGAATATGTGTTTATGAGTGGCCTTCTAAAAACAACCTTCCCAAAGCGCCCGGAAGATGCTTGCTaGTGTCCCTTCTTTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: YEEYVFMSGLLKTTFPKRPEDAC*CPFFLL Trigger: GAGAAGAAAGAAGGGACAGCAGCAAGCATCTTCCGG...GCGCTTTGGGAAGGTTGTTTTTAGAAGGCCACTCATAAACACATATTCTTCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR TCA 90 bp | AAACATTTTATAATAAATAGCACCGCACACAGTACCATCCCCAAAGTATTACTCTTTACCCTCCAGTCCTaGGACAGCAAATCCTGTAAT | + |
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Preference number: 4 (lower is better) Translates to: KHFIINSTAHSTIPKVLLFTLQS*DSKSCN Trigger: ATTACAGGATTTGCTGTCTCAGGACTGGAGGGTAAA...GAGTAATACTTTGGGGATGGTACTGTGTGCGGTGCTATTTATTATAAAATGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS TCA 90 bp | TTTACTGGGGGCCGCCCTAGCGGCATCCAAGTTGGCGGACGAGGCTaGGGTGGAGGGCTGTACCTGAGGTCCCGCGGAGGCCTTGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: FTGGRPSGIQVGGRG*GGGLYLRSRGGLGF Trigger: AAAGCCAAGGCCTCCGCGGGACCTCAGGTACAGCCCTCCACCTCAGCCTCGTCCGCCAACTTGGATGCCGCTAGGGCGGCCCCCAGTAAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS GCA 90 bp | CCTCTTGGTGGCCTGAGGTACAGTGCCGGTCGACGGGCCCTGGGTTaGTCCTTTGGCGCCTTTCAGCTCCGCTACTCTCTCCCGGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: PLGGLRYSAGRRALG*SFGAFQLRYSLPVL Trigger: CAGCACCGGGAGAGAGTAGCGGAGCTGAAAGGCGCCAAAGGAGCAACCCAGGGCCCGTCGACCGGCACTGTACCTCAGGCCACCAAGAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS GCA 90 bp | GGCTCTCCACATCCGTCGCTCTCCTCTTGGTGGCCTGAGGTACAGTaGCGGTCGACGGGCCCTGGGTTGCTCCTTTGGCGCCTTTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: GSPHPSLSSWWPEVQ*RSTGPGLLLWRLSA Trigger: AGCTGAAAGGCGCCAAAGGAGCAACCCAGGGCCCGTCGACCGGCACTGTACCTCAGGCCACCAAGAGGAGAGCGACGGATGTGGAGAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CCA 90 bp | TGGCCTGAGGTACAGTGCCGGTCGACGGGCCCTGGGTTGCTCCTTTaGCGCCTTTCAGCTCCGCTACTCTCTCCCGGTGCTGCTTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: WPEVQCRSTGPGLLL*RLSAPLLSPGAAFP Trigger: TGGGAAAGCAGCACCGGGAGAGAGTAGCGGAGCTGAAAGGCGCCAAAGGAGCAACCCAGGGCCCGTCGACCGGCACTGTACCTCAGGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CCA 90 bp | AGGTGGAGGGCTGTACCTGAGGTCCCGCGGAGGCCTTGGCTTTCTTaGCGTCTTGGCTCTCCACATCCGTCGCTCTCCTCTTGGTGGCCT | + |
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Preference number: 5 (lower is better) Translates to: RWRAVPEVPRRPWLS*RLGSPHPSLSSWWP Trigger: AGGCCACCAAGAGGAGAGCGACGGATGTGGAGAGCCAAGACGCCAAGAAAGCCAAGGCCTCCGCGGGACCTCAGGTACAGCCCTCCACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS TCA 90 bp | GGTGCTGCTTTCCCAGAACATGGGTCTGCCACAGGAGCTCGCTCTTaGCCGGGGTGTTACACAGTGCGCAGCTCAGCTGCCCCAGACGGT | + |
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Preference number: 5 (lower is better) Translates to: GAAFPEHGSATGARS*PGCYTVRSSAAPDG Trigger: ACCGTCTGGGGCAGCTGAGCTGCGCACTGTGTAACACCCCGGTCAAGAGCGAGCTCCTGTGGCAGACCCATGTTCTGGGAAAGCAGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS GCA 90 bp | AGCTCCGCTACTCTCTCCCGGTGCTGCTTTCCCAGAACATGGGTCTaGCACAGGAGCTCGCTCTTGACCGGGGTGTTACACAGTGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: SSATLSRCCFPRTWV*HRSSLLTGVLHSAQ Trigger: CTGCGCACTGTGTAACACCCCGGTCAAGAGCGAGCTCCTGTGGCAGACCCATGTTCTGGGAAAGCAGCACCGGGAGAGAGTAGCGGAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS TCA 90 bp | GTGCTCAGGCGCTGCTTCTCCCTCATCAAGCGCCTCAGTTCTTCCTaGTTCACCACTCGCTTCCCAGCCGGAGTCCGAGTAGAGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: VLRRCFSLIKRLSSS*FTTRFPAGVRVEVE Trigger: CTCCACCTCTACTCGGACTCCGGCTGGGAAGCGAGTGGTGAATCAGGAAGAACTGAGGCGCTTGATGAGGGAGAAGCAGCGCCTGAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS GCA 90 bp | ATGGGTCTGCCACAGGAGCTCGCTCTTGACCGGGGTGTTACACAGTaGGCAGCTCAGCTGCCCCAGACGGTTGTACTTGGCGAATGGAGA | + |
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Preference number: 5 (lower is better) Translates to: MGLPQELALDRGVTQ*AAQLPQTVVLGEWR Trigger: TCTCCATTCGCCAAGTACAACCGTCTGGGGCAGCTGAGCTGCGCACTGTGTAACACCCCGGTCAAGAGCGAGCTCCTGTGGCAGACCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS GCA 90 bp | GTTGCTCCTTTGGCGCCTTTCAGCTCCGCTACTCTCTCCCGGTGCTaGTTTCCCAGAACATGGGTCTGCCACAGGAGCTCGCTCTTGACC | + |
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Preference number: 5 (lower is better) Translates to: VAPLAPFSSATLSRC*FPRTWVCHRSSLLT Trigger: GGTCAAGAGCGAGCTCCTGTGGCAGACCCATGTTCTGGGAAAGCAGCACCGGGAGAGAGTAGCGGAGCTGAAAGGCGCCAAAGGAGCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS GCA 90 bp | TGGGTTGCTCCTTTGGCGCCTTTCAGCTCCGCTACTCTCTCCCGGTaGTGCTTTCCCAGAACATGGGTCTGCCACAGGAGCTCGCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: WVAPLAPFSSATLSR*CFPRTWVCHRSSLL Trigger: CAAGAGCGAGCTCCTGTGGCAGACCCATGTTCTGGGAAAGCAGCACCGGGAGAGAGTAGCGGAGCTGAAAGGCGCCAAAGGAGCAACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CCA 90 bp | ACACAGTGCGCAGCTCAGCTGCCCCAGACGGTTGTACTTGGCGAATaGAGATTCGATCCTCTTCCGGTTGGTGCTCAGGCGCTGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: TQCAAQLPQTVVLGE*RFDPLPVGAQALLL Trigger: GAGAAGCAGCGCCTGAGCACCAACCGGAAGAGGATCGAATCTCCATTCGCCAAGTACAACCGTCTGGGGCAGCTGAGCTGCGCACTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CCA 90 bp | GGGTGTTACACAGTGCGCAGCTCAGCTGCCCCAGACGGTTGTACTTaGCGAATGGAGATTCGATCCTCTTCCGGTTGGTGCTCAGGCGCT | + |
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Preference number: 5 (lower is better) Translates to: GCYTVRSSAAPDGCT*RMEIRSSSGWCSGA Trigger: AGCGCCTGAGCACCAACCGGAAGAGGATCGAATCTCCATTCGCCAAGTACAACCGTCTGGGGCAGCTGAGCTGCGCACTGTGTAACACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS GCA 90 bp | AGGAGCTCGCTCTTGACCGGGGTGTTACACAGTGCGCAGCTCAGCTaGCCCAGACGGTTGTACTTGGCGAATGGAGATTCGATCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: RSSLLTGVLHSAQLS*PRRLYLANGDSILF Trigger: GAAGAGGATCGAATCTCCATTCGCCAAGTACAACCGTCTGGGGCAGCTGAGCTGCGCACTGTGTAACACCCCGGTCAAGAGCGAGCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS GCA 90 bp | GACGGTTGTACTTGGCGAATGGAGATTCGATCCTCTTCCGGTTGGTaGTCAGGCGCTGCTTCTCCCTCATCAAGCGCCTCAGTTCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: DGCTWRMEIRSSSGW*SGAASPSSSASVLP Trigger: AGGAAGAACTGAGGCGCTTGATGAGGGAGAAGCAGCGCCTGAGCACCAACCGGAAGAGGATCGAATCTCCATTCGCCAAGTACAACCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CCA 90 bp | CCAGACGGTTGTACTTGGCGAATGGAGATTCGATCCTCTTCCGGTTaGTGCTCAGGCGCTGCTTCTCCCTCATCAAGCGCCTCAGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: PDGCTWRMEIRSSSG*CSGAASPSSSASVL Trigger: AAGAACTGAGGCGCTTGATGAGGGAGAAGCAGCGCCTGAGCACCAACCGGAAGAGGATCGAATCTCCATTCGCCAAGTACAACCGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR CAA 90 bp | TCCCAACAATTAGGGGTATCCAAGGTCAGAGGAACCCAAGAACTTGGACACAGCCCCTGGGTTGCTCCTTaGGCGCCTTTCAGCTCCGCT | + |
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Preference number: 5 (lower is better) Translates to: SQQLGVSKVRGTQELGHSPWVAP*APFSSA Trigger: AGCGGAGCTGAAAGGCGCCAAAGGAGCAACCCAGGG...GCTGTGTCCAAGTTCTTGGGTTCCTCTGACCTTGGATACCCCTAATTGTTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS GCA 90 bp | GCACATTGCTTGTTGTCTCCCTCGGAGAGGCAAGCGAGTGTTCTTTaGCCTGTGCATCCGGAAGATGCTTGCTGCTGTCCCTTCTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: AHCLLSPSERQASVL*PVHPEDACCCPFFL Trigger: AAGAAAGAAGGGACAGCAGCAAGCATCTTCCGGATGCACAGGGCAAAGAACACTCGCTTGCCTCTCCGAGGGAGACAACAAGCAATGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR CAA 90 bp | CCAACAATTAGGGGTATCCAAGGTCAGAGGAACCCAAGAACTTGGACACAGCACCCACCTTCCGGACCTTaGCATCTACCTCAGGGTCGT | + |
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Preference number: 5 (lower is better) Translates to: PTIRGIQGQRNPRTWTQHPPSGP*HLPQGR Trigger: ACGACCCTGAGGTAGATGCAAAGGTCCGGAAGGTGG...GTGCTGTGTCCAAGTTCTTGGGTTCCTCTGACCTTGGATACCCCTAATTGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CCA 90 bp | CATAGCCTTTTGAAACTCGTCCCACTCTTTGTCCATCTGATCCTTTaGGGCATCCACCTTCCGGACCTTTGCATCTACCTCAGGGTCGTC | + |
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Preference number: 5 (lower is better) Translates to: HSLLKLVPLFVHLIL*GIHLPDLCIYLRVV Trigger: GACGACCCTGAGGTAGATGCAAAGGTCCGGAAGGTGGATGCCCCAAAGGATCAGATGGACAAAGAGTGGGACGAGTTTCAAAAGGCTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR CAA 90 bp | TCCCAACAATTAGGGGTATCCAAGGTCAGAGGAACCCAAGAACTTGGACACAGCAGCTGCCCCAGACGGTaGTACTTGGCGAATGGAGAT | + |
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Preference number: 5 (lower is better) Translates to: SQQLGVSKVRGTQELGHSSCPRR*YLANGD Trigger: ATCTCCATTCGCCAAGTACAACCGTCTGGGGCAGCT...GCTGTGTCCAAGTTCTTGGGTTCCTCTGACCTTGGATACCCCTAATTGTTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR CAA 90 bp | GCACCGCACACAGTACCATCCCCAAAGTATTACTCCTCACTGGCTTACTTTATCCACAGGAGCTCGCTCTaGACCGGGGTGTTACACAGT | + |
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Preference number: 5 (lower is better) Translates to: APHTVPSPKYYSSLAYFIHRSSL*TGVLHS Trigger: ACTGTGTAACACCCCGGTCAAGAGCGAGCTCCTGTG...GATAAAGTAAGCCAGTGAGGAGTAATACTTTGGGGATGGTACTGTGTGCGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR CAA 90 bp | GCACCGCACACAGTACCATCCCCAAAGTATTACTCCTCACTGGCTTACTTTATCGAGGCCTTGGCTTTCTaGGCGTCTTGGCTCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: APHTVPSPKYYSSLAYFIEALAF*ASWLST Trigger: TGTGGAGAGCCAAGACGCCAAGAAAGCCAAGGCCTC...GATAAAGTAAGCCAGTGAGGAGTAATACTTTGGGGATGGTACTGTGTGCGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR CAA 90 bp | CCAACAATTAGGGGTATCCAAGGTCAGAGGAACCCAAGAACTTGGACACAGCACTGTCCATCTGATCCTTaGGGGCATCCACCTTCCGGA | + |
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Preference number: 5 (lower is better) Translates to: PTIRGIQGQRNPRTWTQHCPSDP*GHPPSG Trigger: TCCGGAAGGTGGATGCCCCAAAGGATCAGATGGACA...GTGCTGTGTCCAAGTTCTTGGGTTCCTCTGACCTTGGATACCCCTAATTGTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR CAA 90 bp | CCAACAATTAGGGGTATCCAAGGTCAGAGGAACCCAAGAACTTGGACACAGCACTCGTTTGGCAGCACATaGCTTGTTGTCTCCCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: PTIRGIQGQRNPRTWTQHSFGST*LVVSLG Trigger: TCCGAGGGAGACAACAAGCAATGTGCTGCCAAACGA...GTGCTGTGTCCAAGTTCTTGGGTTCCTCTGACCTTGGATACCCCTAATTGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR CAA 90 bp | GCACCGCACACAGTACCATCCCCAAAGTATTACTCCTCACTGGCTTACTTTATCGCATCCGGAAGATGCTaGCTGCTGTCCCTTCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: APHTVPSPKYYSSLAYFIASGRC*LLSLLS Trigger: AGAAAGAAGGGACAGCAGCAAGCATCTTCCGGATGC...GATAAAGTAAGCCAGTGAGGAGTAATACTTTGGGGATGGTACTGTGTGCGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR CAA 90 bp | ATAGCACCGCACACAGTACCATCCCCAAAGTATTACTCCTCACTGGCTTACTTTCCCAGACGGTTGTACTaGGCGAATGGAGATTCGATC | + |
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Preference number: 5 (lower is better) Translates to: IAPHTVPSPKYYSSLAYFPRRLY*ANGDSI Trigger: GATCGAATCTCCATTCGCCAAGTACAACCGTCTGGG...AAAGTAAGCCAGTGAGGAGTAATACTTTGGGGATGGTACTGTGTGCGGTGCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR CAA 90 bp | AATAGCACCGCACACAGTACCATCCCCAAAGTATTACTCCTCACTGGCTTACTTGGAACTAAGGGGGCCTaGGGAGGATTTGTATTAAAC | + |
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Preference number: 5 (lower is better) Translates to: NSTAHSTIPKVLLLTGLLGTKGA*GGFVLN Trigger: GTTTAATACAAATCCTCCCAAGGCCCCCTTAGTTCC...AAGTAAGCCAGTGAGGAGTAATACTTTGGGGATGGTACTGTGTGCGGTGCTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR CAA 90 bp | AATAGCACCGCACACAGTACCATCCCCAAAGTATTACTCCTCACTGGCTTACTTAGAGATAGTGTTGACTaGCCTCATAGCCTTTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: NSTAHSTIPKVLLLTGLLRDSVD*PHSLLK Trigger: TTTCAAAAGGCTATGAGGCAAGTCAACACTATCTCT...AAGTAAGCCAGTGAGGAGTAATACTTTGGGGATGGTACTGTGTGCGGTGCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS-3UTR CAA 90 bp | TATGAAGAATATGTGTTTATGAGTGGCCTTCTAAAAACAACCTTCCCAAAGCGCTTGCCTCATAGCCTTTaGAAACTCGTCCCACTCTTT | + |
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Preference number: 5 (lower is better) Translates to: YEEYVFMSGLLKTTFPKRLPHSL*KLVPLF Trigger: AAAGAGTGGGACGAGTTTCAAAAGGCTATGAGGCAA...GCGCTTTGGGAAGGTTGTTTTTAGAAGGCCACTCATAAACACATATTCTTCATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS TCA 72 bp | GGCCGCCCTAGCGGCATCCAAGTTGGCGGACGAGGCTaGGGTGGAGGGCTGTACCTGAGGTCCCGCGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: GRPSGIQVGGRG*GGGLYLRSRGG Trigger: GCCTCCGCGGGACCTCAGGTACAGCCCTCCACCTCAGCCTCGTCCGCCAACTTGGATGCCGCTAGGGCGGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS GCA 72 bp | GGCCTGAGGTACAGTGCCGGTCGACGGGCCCTGGGTTaGTCCTTTGGCGCCTTTCAGCTCCGCTACTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: GLRYSAGRRALG*SFGAFQLRYSL Trigger: GAGAGAGTAGCGGAGCTGAAAGGCGCCAAAGGAGCAACCCAGGGCCCGTCGACCGGCACTGTACCTCAGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CCA 72 bp | GTACAGTGCCGGTCGACGGGCCCTGGGTTGCTCCTTTaGCGCCTTTCAGCTCCGCTACTCTCTCCCGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: VQCRSTGPGLLL*RLSAPLLSPGA Trigger: AGCACCGGGAGAGAGTAGCGGAGCTGAAAGGCGCCAAAGGAGCAACCCAGGGCCCGTCGACCGGCACTGTAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CAA 90 bp | TCCTCTTGGTGGCCTGAGGTACAGTGCCGGTCGACGGGCCCTGGGTaGCTCCTTTGGCGCCTTTCAGCTCCGCTACTCTCTCCCGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSWWPEVQCRSTGPG*LLWRLSAPLLSPGA Trigger: AGCACCGGGAGAGAGTAGCGGAGCTGAAAGGCGCCAAAGGAGCAACCCAGGGCCCGTCGACCGGCACTGTACCTCAGGCCACCAAGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CAA 72 bp | TGGCCTGAGGTACAGTGCCGGTCGACGGGCCCTGGGTaGCTCCTTTGGCGCCTTTCAGCTCCGCTACTCTCT | + |
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Preference number: 6 (lower is better) Translates to: WPEVQCRSTGPG*LLWRLSAPLLS Trigger: AGAGAGTAGCGGAGCTGAAAGGCGCCAAAGGAGCAACCCAGGGCCCGTCGACCGGCACTGTACCTCAGGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CAA 90 bp | CGGTGCTGCTTTCCCAGAACATGGGTCTGCCACAGGAGCTCGCTCTaGACCGGGGTGTTACACAGTGCGCAGCTCAGCTGCCCCAGACGG | + |
|
Preference number: 6 (lower is better) Translates to: RCCFPRTWVCHRSSL*TGVLHSAQLSCPRR Trigger: CCGTCTGGGGCAGCTGAGCTGCGCACTGTGTAACACCCCGGTCAAGAGCGAGCTCCTGTGGCAGACCCATGTTCTGGGAAAGCAGCACCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CAA 90 bp | GGGCTGTACCTGAGGTCCCGCGGAGGCCTTGGCTTTCTTGGCGTCTaGGCTCTCCACATCCGTCGCTCTCCTCTTGGTGGCCTGAGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: GLYLRSRGGLGFLGV*ALHIRRSPLGGLRY Trigger: GTACCTCAGGCCACCAAGAGGAGAGCGACGGATGTGGAGAGCCAAGACGCCAAGAAAGCCAAGGCCTCCGCGGGACCTCAGGTACAGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS GCA 72 bp | CCACAGGAGCTCGCTCTTGACCGGGGTGTTACACAGTaGGCAGCTCAGCTGCCCCAGACGGTTGTACTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PQELALDRGVTQ*AAQLPQTVVLG Trigger: GCCAAGTACAACCGTCTGGGGCAGCTGAGCTGCGCACTGTGTAACACCCCGGTCAAGAGCGAGCTCCTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS TCA 72 bp | TTCCCAGAACATGGGTCTGCCACAGGAGCTCGCTCTTaGCCGGGGTGTTACACAGTGCGCAGCTCAGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: FPEHGSATGARS*PGCYTVRSSAA Trigger: GGCAGCTGAGCTGCGCACTGTGTAACACCCCGGTCAAGAGCGAGCTCCTGTGGCAGACCCATGTTCTGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS GCA 72 bp | TTGGCGCCTTTCAGCTCCGCTACTCTCTCCCGGTGCTaGTTTCCCAGAACATGGGTCTGCCACAGGAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LAPFSSATLSRC*FPRTWVCHRSS Trigger: CGAGCTCCTGTGGCAGACCCATGTTCTGGGAAAGCAGCACCGGGAGAGAGTAGCGGAGCTGAAAGGCGCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS GCA 72 bp | CCTTTGGCGCCTTTCAGCTCCGCTACTCTCTCCCGGTaGTGCTTTCCCAGAACATGGGTCTGCCACAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLAPFSSATLSR*CFPRTWVCHRS Trigger: GCTCCTGTGGCAGACCCATGTTCTGGGAAAGCAGCACCGGGAGAGAGTAGCGGAGCTGAAAGGCGCCAAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CAA 90 bp | GGGGTGTTACACAGTGCGCAGCTCAGCTGCCCCAGACGGTTGTACTaGGCGAATGGAGATTCGATCCTCTTCCGGTTGGTGCTCAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GVLHSAQLSCPRRLY*ANGDSILFRLVLRR Trigger: GCGCCTGAGCACCAACCGGAAGAGGATCGAATCTCCATTCGCCAAGTACAACCGTCTGGGGCAGCTGAGCTGCGCACTGTGTAACACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS GCA 72 bp | ACTCTCTCCCGGTGCTGCTTTCCCAGAACATGGGTCTaGCACAGGAGCTCGCTCTTGACCGGGGTGTTACAC | + |
|
Preference number: 6 (lower is better) Translates to: TLSRCCFPRTWV*HRSSLLTGVLH Trigger: GTGTAACACCCCGGTCAAGAGCGAGCTCCTGTGGCAGACCCATGTTCTGGGAAAGCAGCACCGGGAGAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CCA 72 bp | GCAGCTCAGCTGCCCCAGACGGTTGTACTTGGCGAATaGAGATTCGATCCTCTTCCGGTTGGTGCTCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: AAQLPQTVVLGE*RFDPLPVGAQA Trigger: CGCCTGAGCACCAACCGGAAGAGGATCGAATCTCCATTCGCCAAGTACAACCGTCTGGGGCAGCTGAGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CAA 72 bp | TTTCCCAGAACATGGGTCTGCCACAGGAGCTCGCTCTaGACCGGGGTGTTACACAGTGCGCAGCTCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FPRTWVCHRSSL*TGVLHSAQLSC Trigger: GCAGCTGAGCTGCGCACTGTGTAACACCCCGGTCAAGAGCGAGCTCCTGTGGCAGACCCATGTTCTGGGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CAA 90 bp | TTGACCGGGGTGTTACACAGTGCGCAGCTCAGCTGCCCCAGACGGTaGTACTTGGCGAATGGAGATTCGATCCTCTTCCGGTTGGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LTGVLHSAQLSCPRR*YLANGDSILFRLVL Trigger: GAGCACCAACCGGAAGAGGATCGAATCTCCATTCGCCAAGTACAACCGTCTGGGGCAGCTGAGCTGCGCACTGTGTAACACCCCGGTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS TCA 72 bp | CGCTGCTTCTCCCTCATCAAGCGCCTCAGTTCTTCCTaGTTCACCACTCGCTTCCCAGCCGGAGTCCGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: RCFSLIKRLSSS*FTTRFPAGVRV Trigger: TACTCGGACTCCGGCTGGGAAGCGAGTGGTGAATCAGGAAGAACTGAGGCGCTTGATGAGGGAGAAGCAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS GCA 72 bp | CTCTTGACCGGGGTGTTACACAGTGCGCAGCTCAGCTaGCCCAGACGGTTGTACTTGGCGAATGGAGATTCG | + |
|
Preference number: 6 (lower is better) Translates to: LLTGVLHSAQLS*PRRLYLANGDS Trigger: CGAATCTCCATTCGCCAAGTACAACCGTCTGGGGCAGCTGAGCTGCGCACTGTGTAACACCCCGGTCAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CCA 72 bp | ACAGTGCGCAGCTCAGCTGCCCCAGACGGTTGTACTTaGCGAATGGAGATTCGATCCTCTTCCGGTTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: TVRSSAAPDGCT*RMEIRSSSGWC Trigger: GCACCAACCGGAAGAGGATCGAATCTCCATTCGCCAAGTACAACCGTCTGGGGCAGCTGAGCTGCGCACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CAA 72 bp | CACAGTGCGCAGCTCAGCTGCCCCAGACGGTTGTACTaGGCGAATGGAGATTCGATCCTCTTCCGGTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: HSAQLSCPRRLY*ANGDSILFRLV Trigger: CACCAACCGGAAGAGGATCGAATCTCCATTCGCCAAGTACAACCGTCTGGGGCAGCTGAGCTGCGCACTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CAA 90 bp | CCCAGACGGTTGTACTTGGCGAATGGAGATTCGATCCTCTTCCGGTaGGTGCTCAGGCGCTGCTTCTCCCTCATCAAGCGCCTCAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PRRLYLANGDSILFR*VLRRCFSLIKRLSS Trigger: AGAACTGAGGCGCTTGATGAGGGAGAAGCAGCGCCTGAGCACCAACCGGAAGAGGATCGAATCTCCATTCGCCAAGTACAACCGTCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS GCA 72 bp | ACTTGGCGAATGGAGATTCGATCCTCTTCCGGTTGGTaGTCAGGCGCTGCTTCTCCCTCATCAAGCGCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: TWRMEIRSSSGW*SGAASPSSSAS Trigger: TGAGGCGCTTGATGAGGGAGAAGCAGCGCCTGAGCACCAACCGGAAGAGGATCGAATCTCCATTCGCCAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS GCA 72 bp | CTCCCTCGGAGAGGCAAGCGAGTGTTCTTTGCCCTGTaGATCCGGAAGATGCTTGCTGCTGTCCCTTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LPRRGKRVFFAL*IRKMLAAVPSF Trigger: GAAAGAAGGGACAGCAGCAAGCATCTTCCGGATGCACAGGGCAAAGAACACTCGCTTGCCTCTCCGAGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CCA 72 bp | TGTACTTGGCGAATGGAGATTCGATCCTCTTCCGGTTaGTGCTCAGGCGCTGCTTCTCCCTCATCAAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: CTWRMEIRSSSG*CSGAASPSSSA Trigger: GGCGCTTGATGAGGGAGAAGCAGCGCCTGAGCACCAACCGGAAGAGGATCGAATCTCCATTCGCCAAGTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CAA 72 bp | GTGTTACACAGTGCGCAGCTCAGCTGCCCCAGACGGTaGTACTTGGCGAATGGAGATTCGATCCTCTTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: VLHSAQLSCPRR*YLANGDSILFR Trigger: CCGGAAGAGGATCGAATCTCCATTCGCCAAGTACAACCGTCTGGGGCAGCTGAGCTGCGCACTGTGTAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS GCA 72 bp | CATCTGATCCTTTGGGGCATCCACCTTCCGGACCTTTaGATCTACCTCAGGGTCGTCGAAGAACCCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: HLILWGIHLPDL*IYLRVVEEPFW Trigger: CCAGAAGGGTTCTTCGACGACCCTGAGGTAGATGCAAAGGTCCGGAAGGTGGATGCCCCAAAGGATCAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CAA 72 bp | TTGTACTTGGCGAATGGAGATTCGATCCTCTTCCGGTaGGTGCTCAGGCGCTGCTTCTCCCTCATCAAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LYLANGDSILFR*VLRRCFSLIKR Trigger: GCGCTTGATGAGGGAGAAGCAGCGCCTGAGCACCAACCGGAAGAGGATCGAATCTCCATTCGCCAAGTACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CAA 72 bp | CCATCTGATCCTTTGGGGCATCCACCTTCCGGACCTTaGCATCTACCTCAGGGTCGTCGAAGAACCCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PSDPLGHPPSGP*HLPQGRRRTLL Trigger: CAGAAGGGTTCTTCGACGACCCTGAGGTAGATGCAAAGGTCCGGAAGGTGGATGCCCCAAAGGATCAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CAA 90 bp | AGCACATTGCTTGTTGTCTCCCTCGGAGAGGCAAGCGAGTGTTCTTaGCCCTGTGCATCCGGAAGATGCTTGCTGCTGTCCCTTCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: STLLVVSLGEASECS*PCASGRCLLLSLLS Trigger: AGAAAGAAGGGACAGCAGCAAGCATCTTCCGGATGCACAGGGCAAAGAACACTCGCTTGCCTCTCCGAGGGAGACAACAAGCAATGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CAA 90 bp | GGGGCCTTGGGAGGATTTGTATTAAACGGATCGTTTGGCAGCACATaGCTTGTTGTCTCCCTCGGAGAGGCAAGCGAGTGTTCTTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GALGGFVLNGSFGST*LVVSLGEASECSLP Trigger: GGGCAAAGAACACTCGCTTGCCTCTCCGAGGGAGACAACAAGCAATGTGCTGCCAAACGATCCGTTTAATACAAATCCTCCCAAGGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CAA 90 bp | ACTCTTTGTCCATCTGATCCTTTGGGGCATCCACCTTCCGGACCTTaGCATCTACCTCAGGGTCGTCGAAGAACCCTTCTGGTAATGCTT | + |
|
Preference number: 6 (lower is better) Translates to: TLCPSDPLGHPPSGP*HLPQGRRRTLLVML Trigger: AAGCATTACCAGAAGGGTTCTTCGACGACCCTGAGGTAGATGCAAAGGTCCGGAAGGTGGATGCCCCAAAGGATCAGATGGACAAAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CCA 72 bp | TTGAAACTCGTCCCACTCTTTGTCCATCTGATCCTTTaGGGCATCCACCTTCCGGACCTTTGCATCTACCTC | + |
|
Preference number: 6 (lower is better) Translates to: LKLVPLFVHLIL*GIHLPDLCIYL Trigger: GAGGTAGATGCAAAGGTCCGGAAGGTGGATGCCCCAAAGGATCAGATGGACAAAGAGTGGGACGAGTTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CAA 72 bp | GGAGGATTTGTATTAAACGGATCGTTTGGCAGCACATaGCTTGTTGTCTCCCTCGGAGAGGCAAGCGAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: GGFVLNGSFGST*LVVSLGEASEC Trigger: ACACTCGCTTGCCTCTCCGAGGGAGACAACAAGCAATGTGCTGCCAAACGATCCGTTTAATACAAATCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CAA 72 bp | TTTGAAACTCGTCCCACTCTTTGTCCATCTGATCCTTaGGGGCATCCACCTTCCGGACCTTTGCATCTACCT | + |
|
Preference number: 6 (lower is better) Translates to: FETRPTLCPSDP*GHPPSGPLHLP Trigger: AGGTAGATGCAAAGGTCCGGAAGGTGGATGCCCCAAAGGATCAGATGGACAAAGAGTGGGACGAGTTTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CAA 90 bp | AGCAACGATCGCTTCAGAGATAGTGTTGACTTGCCTCATAGCCTTTaGAAACTCGTCCCACTCTTTGTCCATCTGATCCTTTGGGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: SNDRFRDSVDLPHSL*KLVPLFVHLILWGI Trigger: GATGCCCCAAAGGATCAGATGGACAAAGAGTGGGACGAGTTTCAAAAGGCTATGAGGCAAGTCAACACTATCTCTGAAGCGATCGTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CAA 90 bp | CTCCTCATCCTCTTCAGCAACGATCGCTTCAGAGATAGTGTTGACTaGCCTCATAGCCTTTTGAAACTCGTCCCACTCTTTGTCCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLILFSNDRFRDSVD*PHSLLKLVPLFVHL Trigger: CAGATGGACAAAGAGTGGGACGAGTTTCAAAAGGCTATGAGGCAAGTCAACACTATCTCTGAAGCGATCGTTGCTGAAGAGGATGAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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| CDS CAA 72 bp | CGCTTCAGAGATAGTGTTGACTTGCCTCATAGCCTTTaGAAACTCGTCCCACTCTTTGTCCATCTGATCCTT | + |
|
Preference number: 6 (lower is better) Translates to: RFRDSVDLPHSL*KLVPLFVHLIL Trigger: AAGGATCAGATGGACAAAGAGTGGGACGAGTTTCAAAAGGCTATGAGGCAAGTCAACACTATCTCTGAAGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056677.8 |
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