Pregenerated sensors for ZFP820 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069743Ensembl transcript IDs: ENSMUST00000084141.6, ENSMUST00000232918.2
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGAAGGCTGTCAGTTTCATTAGCTATTCTGAAGTATGTATTTCTTaGCTTAACCAGCTTCTCTTTGAAATAGATCATTTCAGTCTCCAG | + |
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Preference number: 1 (lower is better) Translates to: QKAVSFISYSEVCIS*LNQLLFEIDHFSLQ Trigger: CTGGAGACTGAAATGATCTATTTCAAAGAGAAGCTGGTTAAGGCAAGAAATACATACTTCAGAATAGCTAATGAAACTGACAGCCTTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084141.6 |
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| 3UTR CAA 90 bp | TCTCCAGGAAACGTTACTCAATTCCATATTCTTCTAGCTTCTCCATaGTGTCTTCATGATGACGTATTTGACAGTGAACAAGTAAAACTT | + |
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Preference number: 2 (lower is better) Translates to: SPGNVTQFHILLASP*CLHDDVFDSEQVKL Trigger: AAGTTTTACTTGTTCACTGTCAAATACGTCATCATGAAGACACAATGGAGAAGCTAGAAGAATATGGAATTGAGTAACGTTTCCTGGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084141.6 |
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| 3UTR-3UTR GCA 90 bp | AAAGAGCATCCTATCTTTATGGCTCAGTTTGTCAAATCCTCTTTTAAGAAGCATTGGAGCTTCAAGTGTTaGAAACAATATGACTTGGAC | + |
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Preference number: 2 (lower is better) Translates to: KEHPIFMAQFVKSSFKKHWSFKC*KQYDLD Trigger: GTCCAAGTCATATTGTTTGCAACACTTGAAGCTCCA...ATGCTTCTTAAAAGAGGATTTGACAAACTGAGCCATAAAGATAGGATGCTCTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084141.6 |
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| 3UTR-3UTR CCA 90 bp | AAAGAGCATCCTATCTTTATGGCTCAGTTTGTCAAATCCTCTTTTAAGAAGCATAGAAGATTTCCTTTTTaGGTAAAGGTTGCGCCACAT | + |
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Preference number: 2 (lower is better) Translates to: KEHPIFMAQFVKSSFKKHRRFPF*VKVAPH Trigger: ATGTGGCGCAACCTTTACCCAAAAAGGAAATCTTCT...ATGCTTCTTAAAAGAGGATTTGACAAACTGAGCCATAAAGATAGGATGCTCTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084141.6 |
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| 3UTR-3UTR CAA 90 bp | AAGAGCATCCTATCTTTATGGCTCAGTTTGTCAAATCCTCTTTTAAGAAGCATATTTCTAAGATCACCTTaGTGGGAAAAGCATTTGTCA | + |
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Preference number: 3 (lower is better) Translates to: KSILSLWLSLSNPLLRSIFLRSP*WEKHLS Trigger: TGACAAATGCTTTTCCCACAAAGGTGATCTTAGAAA...TATGCTTCTTAAAAGAGGATTTGACAAACTGAGCCATAAAGATAGGATGCTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084141.6 |
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| 3UTR-3UTR CAA 90 bp | AAGAGCATCCTATCTTTATGGCTCAGTTTGTCAAATCCTCTTTTAAGAAGCATATGTCTTCACAACAAATaGTCTTCACATTCTCTGTTG | + |
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Preference number: 3 (lower is better) Translates to: KSILSLWLSLSNPLLRSICLHNK*SSHSLL Trigger: CAACAGAGAATGTGAAGACAATTTGTTGTGAAGACA...TATGCTTCTTAAAAGAGGATTTGACAAACTGAGCCATAAAGATAGGATGCTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084141.6 |
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| 3UTR GCA 72 bp | ATAAATAATAATTCTCTAGTGTGGAGCTTCAAGTGTTaGAAACAATATGACTTGGACAAAGTCCATGCCACA | + |
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Preference number: 3 (lower is better) Translates to: INNNSLVWSFKC*KQYDLDKVHAT Trigger: TGTGGCATGGACTTTGTCCAAGTCATATTGTTTGCAACACTTGAAGCTCCACACTAGAGAATTATTATTTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084141.6 |
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| CDS-3UTR TCA 90 bp | ATGAACTCTCTGATGAGCATTAAGACTGCTTTTGTAGGTAAAACACTTGTCACAATGTACAGTGCCCTCTaGGCACAATCAAGACATTCC | + |
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Preference number: 4 (lower is better) Translates to: MNSLMSIKTAFVGKTLVTMYSAL*AQSRHS Trigger: GGAATGTCTTGATTGTGCTCAGAGGGCACTGTACAT...TGTGACAAGTGTTTTACCTACAAAAGCAGTCTTAATGCTCATCAGAGAGTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084141.6 ENSMUST00000232918.2 |
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| CDS-3UTR GCA 90 bp | ATGAACTCTCTGATGAGCATTAAGACTGCTTTTGTAGGTAAAACACTTGTCACACACATCCATGTACAGTaGCCTCTGAGCACAATCAAG | + |
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Preference number: 4 (lower is better) Translates to: MNSLMSIKTAFVGKTLVTHIHVQ*PLSTIK Trigger: CTTGATTGTGCTCAGAGGGCACTGTACATGGATGTG...TGTGACAAGTGTTTTACCTACAAAAGCAGTCTTAATGCTCATCAGAGAGTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084141.6 ENSMUST00000232918.2 |
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| CDS-3UTR TCA 90 bp | AAAGAGCATCCTATCTTTATGGCTCAGTTTGTCAAATCCTCTTTTAAGAAGCATATGTACAGTGCCCTCTaGGCACAATCAAGACATTCC | + |
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Preference number: 4 (lower is better) Translates to: KEHPIFMAQFVKSSFKKHMYSAL*AQSRHS Trigger: GGAATGTCTTGATTGTGCTCAGAGGGCACTGTACAT...ATGCTTCTTAAAAGAGGATTTGACAAACTGAGCCATAAAGATAGGATGCTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084141.6 |
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| CDS-3UTR TCA 90 bp | ATGAACTCTCTGATGAGCATTAAGACTGCTTTTGTAGGTAAAACACTTGTCACAGGGTGGATTCATGAATaGTTTTGCCAAGCTCATGAC | + |
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Preference number: 4 (lower is better) Translates to: MNSLMSIKTAFVGKTLVTGWIHE*FCQAHD Trigger: GTCATGAGCTTGGCAAAATCATTCATGAATCCACCC...TGTGACAAGTGTTTTACCTACAAAAGCAGTCTTAATGCTCATCAGAGAGTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084141.6 ENSMUST00000232918.2 |
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| CDS-3UTR GCA 90 bp | AAAGAGCATCCTATCTTTATGGCTCAGTTTGTCAAATCCTCTTTTAAGAAGCATCACATCCATGTACAGTaGCCTCTGAGCACAATCAAG | + |
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Preference number: 4 (lower is better) Translates to: KEHPIFMAQFVKSSFKKHHIHVQ*PLSTIK Trigger: CTTGATTGTGCTCAGAGGGCACTGTACATGGATGTG...ATGCTTCTTAAAAGAGGATTTGACAAACTGAGCCATAAAGATAGGATGCTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084141.6 |
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| CDS-3UTR TCA 90 bp | AAAGAGCATCCTATCTTTATGGCTCAGTTTGTCAAATCCTCTTTTAAGAAGCATGGGTGGATTCATGAATaGTTTTGCCAAGCTCATGAC | + |
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Preference number: 4 (lower is better) Translates to: KEHPIFMAQFVKSSFKKHGWIHE*FCQAHD Trigger: GTCATGAGCTTGGCAAAATCATTCATGAATCCACCC...ATGCTTCTTAAAAGAGGATTTGACAAACTGAGCCATAAAGATAGGATGCTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084141.6 |
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| CDS-3UTR CCA 90 bp | ATGAACTCTCTGATGAGCATTAAGACTGCTTTTGTAGGTAAAACACTTGTCACAACATACCCAATTCCTTaGCTACAGTTTCCTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: MNSLMSIKTAFVGKTLVTTYPIP*LQFPLF Trigger: GAAGAGAGGAAACTGTAGCCAAGGAATTGGGTATGT...TGTGACAAGTGTTTTACCTACAAAAGCAGTCTTAATGCTCATCAGAGAGTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232918.2 |
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| CDS-3UTR TCA 90 bp | AAAGAGCATCCTATCTTTATGGCTCAGTTTGTCAAATCCTCTTTTAAGAAGCATCTTCTGTGGATTCCCTaGGTTAAACTAATGGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: KEHPIFMAQFVKSSFKKHLLWIP*VKLMVE Trigger: CTCTACCATTAGTTTAACTCAGGGAATCCACAGAAG...ATGCTTCTTAAAAGAGGATTTGACAAACTGAGCCATAAAGATAGGATGCTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084141.6 |
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| CDS-3UTR TCA 90 bp | ATGAACTCTCTGATGAGCATTAAGACTGCTTTTGTAGGTAAAACACTTGTCACAGCTTGCATTTCTTGGTaGAACATTTGTCACATTCAC | + |
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Preference number: 4 (lower is better) Translates to: MNSLMSIKTAFVGKTLVTACISW*NICHIH Trigger: GTGAATGTGACAAATGTTTCACCAAGAAATGCAAGC...TGTGACAAGTGTTTTACCTACAAAAGCAGTCTTAATGCTCATCAGAGAGTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084141.6 ENSMUST00000232918.2 |
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| CDS-3UTR CCA 90 bp | ATGAACTCTCTGATGAGCATTAAGACTGCTTTTGTAGGTAAAACACTTGTCACACTAAGATCACCTTTGTaGGTAAAGCATTTGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: MNSLMSIKTAFVGKTLVTLRSPL*VKHLPH Trigger: ATGTGGCAAATGCTTTACCCACAAAGGTGATCTTAG...TGTGACAAGTGTTTTACCTACAAAAGCAGTCTTAATGCTCATCAGAGAGTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084141.6 ENSMUST00000232918.2 |
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| CDS-3UTR TCA 90 bp | AAGAGCATCCTATCTTTATGGCTCAGTTTGTCAAATCCTCTTTTAAGAAGCATAGCTTGCATTTCTTGGTaGAACATTTGTCACATTCAC | + |
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Preference number: 4 (lower is better) Translates to: KSILSLWLSLSNPLLRSIACISW*NICHIH Trigger: GTGAATGTGACAAATGTTTCACCAAGAAATGCAAGC...TATGCTTCTTAAAAGAGGATTTGACAAACTGAGCCATAAAGATAGGATGCTCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084141.6 |
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| CDS-3UTR TCA 90 bp | ATGAACTCTCTGATGAGCATTAAGACTGCTTTTGTAGGTAAAACACTTGTCACACTAAGATTGCCTTGCTaGGAAAAAGATTTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: MNSLMSIKTAFVGKTLVTLRLPC*EKDLSH Trigger: ATGTGACAAATCTTTTTCTCAGCAAGGCAATCTTAG...TGTGACAAGTGTTTTACCTACAAAAGCAGTCTTAATGCTCATCAGAGAGTTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084141.6 ENSMUST00000232918.2 |
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| CDS-3UTR TCA 90 bp | ATGAACTCTCTGATGAGCATTAAGACTGCTTTTGTAGGTAAAACACTTGTCACAATAAGACGGCATTTTTaGGTAAAGCCTTTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: MNSLMSIKTAFVGKTLVTIRRHF*VKPLSH Trigger: ATGTGACAAAGGCTTTACTCAAAAATGCCGTCTTAT...TGTGACAAGTGTTTTACCTACAAAAGCAGTCTTAATGCTCATCAGAGAGTTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084141.6 ENSMUST00000232918.2 |
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| CDS-3UTR TCA 90 bp | ATGAACTCTCTGATGAGCATTAAGACTGCTTTTGTAGGTAAAACACTTGTCACACTAAGATTGCCTTGCTaGGTAAAAGATTTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: MNSLMSIKTAFVGKTLVTLRLPC*VKDLSH Trigger: ATGTGACAAATCTTTTACTCAGCAAGGCAATCTTAG...TGTGACAAGTGTTTTACCTACAAAAGCAGTCTTAATGCTCATCAGAGAGTTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084141.6 ENSMUST00000232918.2 |
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| CDS-3UTR TCA 90 bp | ATGAACTCTCTGATGAGCATTAAGACTGCTTTTGTAGGTAAAACACTTGTCACACTTGTTACTCTTACCTaGATTCTTCTAACATACCCA | + |
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Preference number: 4 (lower is better) Translates to: MNSLMSIKTAFVGKTLVTLVTLT*ILLTYP Trigger: TGGGTATGTTAGAAGAATTCAGGTAAGAGTAACAAG...TGTGACAAGTGTTTTACCTACAAAAGCAGTCTTAATGCTCATCAGAGAGTTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232918.2 |
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| CDS-3UTR TCA 90 bp | AAAGAGCATCCTATCTTTATGGCTCAGTTTGTCAAATCCTCTTTTAAGAAGCATATAAGACGGCATTTTTaGGTAAAGCCTTTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: KEHPIFMAQFVKSSFKKHIRRHF*VKPLSH Trigger: ATGTGACAAAGGCTTTACTCAAAAATGCCGTCTTAT...ATGCTTCTTAAAAGAGGATTTGACAAACTGAGCCATAAAGATAGGATGCTCTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084141.6 |
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| 3UTR CAA 72 bp | AACGTTACTCAATTCCATATTCTTCTAGCTTCTCCATaGTGTCTTCATGATGACGTATTTGACAGTGAACAA | + |
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Preference number: 4 (lower is better) Translates to: NVTQFHILLASP*CLHDDVFDSEQ Trigger: TTGTTCACTGTCAAATACGTCATCATGAAGACACAATGGAGAAGCTAGAAGAATATGGAATTGAGTAACGTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084141.6 |
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| 3UTR CAA 72 bp | TACAGGATAAAGAGCATCCTATCTTTATGGCTCAGTTaGTCAAATCCTCTTTTAAGAAGCATAATTTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: YRIKSILSLWLS*SNPLLRSIICL Trigger: CAGACAAATTATGCTTCTTAAAAGAGGATTTGACAAACTGAGCCATAAAGATAGGATGCTCTTTATCCTGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084141.6 |
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| CDS-3UTR CAA 90 bp | ATGAACTCTCTGATGAGCATTAAGACTGCTTTTGTAGGTAAAACACTTGTCACACTTCTAAGATCACCTTaGTGGGTAAAGCATTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: MNSLMSIKTAFVGKTLVTLLRSP*WVKHLP Trigger: TGGCAAATGCTTTACCCACAAAGGTGATCTTAGAAG...TGTGACAAGTGTTTTACCTACAAAAGCAGTCTTAATGCTCATCAGAGAGTTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084141.6 ENSMUST00000232918.2 |
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| CDS-3UTR CAA 90 bp | ATGAACTCTCTGATGAGCATTAAGACTGCTTTTGTAGGTAAAACACTTGTCACAATATTAAGACGGCTTTaGCTGGTAAAGCCTTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: MNSLMSIKTAFVGKTLVTILRRL*LVKPLS Trigger: TGACAAAGGCTTTACCAGCAAAAGCCGTCTTAATAT...TGTGACAAGTGTTTTACCTACAAAAGCAGTCTTAATGCTCATCAGAGAGTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084141.6 ENSMUST00000232918.2 |
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| CDS-3UTR CAA 90 bp | AAAGAGCATCCTATCTTTATGGCTCAGTTTGTCAAATCCTCTTTTAAGAAGCATCTTCTAAGATCACCTTaGTGGGTAAAGCATTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: KEHPIFMAQFVKSSFKKHLLRSP*WVKHLP Trigger: TGGCAAATGCTTTACCCACAAAGGTGATCTTAGAAG...ATGCTTCTTAAAAGAGGATTTGACAAACTGAGCCATAAAGATAGGATGCTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084141.6 |
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| CDS-3UTR CAA 90 bp | ATGAACTCTCTGATGAGCATTAAGACTGCTTTTGTAGGTAAAACACTTGTCACAGATAAGACGGCATTTTaGAGTAAAGCCTTTGTCACA | + |
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Preference number: 5 (lower is better) Translates to: MNSLMSIKTAFVGKTLVTDKTAF*SKAFVT Trigger: TGTGACAAAGGCTTTACTCAAAAATGCCGTCTTATC...TGTGACAAGTGTTTTACCTACAAAAGCAGTCTTAATGCTCATCAGAGAGTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084141.6 ENSMUST00000232918.2 |
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| CDS-3UTR CAA 90 bp | ATGAACTCTCTGATGAGCATTAAGACTGCTTTTGTAGGTAAAACACTTGTCACAGGTTTTTCTCTATTATaGGTTTGCTTCAGCTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: MNSLMSIKTAFVGKTLVTGFSLL*VCFSLS Trigger: ACTCAAGCTGAAGCAAACCAATAATAGAGAAAAACC...TGTGACAAGTGTTTTACCTACAAAAGCAGTCTTAATGCTCATCAGAGAGTTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084141.6 ENSMUST00000232918.2 |
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| CDS-3UTR CAA 90 bp | ATGAACTCTCTGATGAGCATTAAGACTGCTTTTGTAGGTAAAACACTTGTCACACTAAGCTTGCATTTCTaGGTGAAACATTTGTCACAT | + |
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Preference number: 5 (lower is better) Translates to: MNSLMSIKTAFVGKTLVTLSLHF*VKHLSH Trigger: ATGTGACAAATGTTTCACCAAGAAATGCAAGCTTAG...TGTGACAAGTGTTTTACCTACAAAAGCAGTCTTAATGCTCATCAGAGAGTTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084141.6 ENSMUST00000232918.2 |
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| CDS-3UTR CAA 90 bp | ATGAACTCTCTGATGAGCATTAAGACTGCTTTTGTAGGTAAAACACTTGTCACAATAAGACGGCATTTTTaGAGTAAAGCCTTTGTCACA | + |
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Preference number: 5 (lower is better) Translates to: MNSLMSIKTAFVGKTLVTIRRHF*SKAFVT Trigger: TGTGACAAAGGCTTTACTCAAAAAATGCCGTCTTAT...TGTGACAAGTGTTTTACCTACAAAAGCAGTCTTAATGCTCATCAGAGAGTTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000084141.6 ENSMUST00000232918.2 |
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| CDS-3UTR CAA 90 bp | AAAGAGCATCCTATCTTTATGGCTCAGTTTGTCAAATCCTCTTTTAAGAAGCATATAAGACGGCATTTTTaGAGTAAAGCCTTTGTCACA | + |
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Preference number: 5 (lower is better) Translates to: KEHPIFMAQFVKSSFKKHIRRHF*SKAFVT Trigger: TGTGACAAAGGCTTTACTCAAAAAATGCCGTCTTAT...ATGCTTCTTAAAAGAGGATTTGACAAACTGAGCCATAAAGATAGGATGCTCTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084141.6 |
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| CDS CAA 72 bp | AGATGTAGCCCTGAGGTTAGTTTTATAAGGTGTACTTaGGGTGGATTCATGAATGATTTTGCCAAGCTCATG | + |
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Preference number: 6 (lower is better) Translates to: RCSPEVSFIRCT*GGFMNDFAKLM Trigger: CATGAGCTTGGCAAAATCATTCATGAATCCACCCAAAGTACACCTTATAAAACTAACCTCAGGGCTACATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084141.6 ENSMUST00000232918.2 |
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| CDS TCA 72 bp | AGGAGAGAAGCATTCATTCTTCTTGTTACTCTTACCTaGATTCTTCTAACATACCCAATTCCTTGGCTACAG | + |
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Preference number: 6 (lower is better) Translates to: RREAFILLVTLT*ILLTYPIPWLQ Trigger: CTGTAGCCAAGGAATTGGGTATGTTAGAAGAATTCAGGTAAGAGTAACAAGAAGAATGAATGCTTCTCTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232918.2 |
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| CDS CAA 72 bp | GATATTCACATGCTCATGGACAATATGCTGAAGGTCTaGATCCAAGATGTTCTTATATTTAGGACACATCCC | + |
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Preference number: 6 (lower is better) Translates to: DIHMLMDNMLKV*IQDVLIFRTHP Trigger: GGGATGTGTCCTAAATATAAGAACATCTTGGATCAAGACCTTCAGCATATTGTCCATGAGCATGTGAATATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084141.6 ENSMUST00000232918.2 |
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| CDS CAA 72 bp | GAGAACAAATTTAAACAGTTAACAGGGCTTTTAGATTaGCAAGGTTCTCTGTTGTTTTCAGTTTCATGTCTG | + |
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Preference number: 6 (lower is better) Translates to: ENKFKQLTGLLD*QGSLLFSVSCL Trigger: CAGACATGAAACTGAAAACAACAGAGAACCTTGCAAATCTAAAAGCCCTGTTAACTGTTTAAATTTGTTCTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084141.6 ENSMUST00000232918.2 |
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