Pregenerated sensors for ZFP82 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000098022Ensembl transcript IDs: ENSMUST00000080834.15, ENSMUST00000182546.8, ENSMUST00000183115.8, ENSMUST00000183190.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCATTACTTTCCTTAGTCTTTGCGTCACAGTGCAGCCCGGAGGAATaGCTCTCTTTATTACTCCTCTGTTCCATAGACGTTGTTCAGCTG | + |
|
Preference number: 1 (lower is better) Translates to: PLLSLVFASQCSPEE*LSLLLLCSIDVVQL Trigger: CAGCTGAACAACGTCTATGGAACAGAGGAGTAATAAAGAGAGCCATTCCTCCGGGCTGCACTGTGACGCAAAGACTAAGGAAAGTAATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR CCA 90 bp | ACTGACCACCAAGGAGGTATGATACTTAACAGAACCATTTTTCCTTaGTTGTTTGGCTTGGCTTTTGAGACAGGGTTTCATGGAGCAGTG | + |
|
Preference number: 1 (lower is better) Translates to: TDHQGGMILNRTIFP*LFGLAFETGFHGAV Trigger: CACTGCTCCATGAAACCCTGTCTCAAAAGCCAAGCCAAACAACCAAGGAAAAATGGTTCTGTTAAGTATCATACCTCCTTGGTGGTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR TCA 90 bp | CAGGAGACTGTGTCAAGACACACAAAACTAAAGGGAGCAGCAAAGTaGGCACTATTAGAACAGAGACAGCTGGTAATGGATCTTAAAACC | + |
|
Preference number: 1 (lower is better) Translates to: QETVSRHTKLKGAAK*ALLEQRQLVMDLKT Trigger: GGTTTTAAGATCCATTACCAGCTGTCTCTGTTCTAATAGTGCTCACTTTGCTGCTCCCTTTAGTTTTGTGTGTCTTGACACAGTCTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR CCA 90 bp | TCATCATTCCATACTTGTTCTGCCCGGATCTCCCATGGTTTACTATaGGTGGTTGAATATTCTCCTCATGAGTCCAAGCTTGTGCTATAT | + |
|
Preference number: 1 (lower is better) Translates to: SSFHTCSARISHGLL*VVEYSPHESKLVLY Trigger: ATATAGCACAAGCTTGGACTCATGAGGAGAATATTCAACCACCCATAGTAAACCATGGGAGATCCGGGCAGAACAAGTATGGAATGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR-3UTR GCA 90 bp | CTATATGACCACGTGGGACAGAGAGCTCACTCATGCCTCTCCTTTGCATCTGCCGTCCCTTCCTCCCCTTaGTCTGCACTTCTCCACCCC | + |
|
Preference number: 2 (lower is better) Translates to: LYDHVGQRAHSCLSFASAVPSSP*SALLHP Trigger: GGGGTGGAGAAGTGCAGAGCAAGGGGAGGAAGGGAC...GGCAGATGCAAAGGAGAGGCATGAGTGAGCTCTCTGTCCCACGTGGTCATATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR-3UTR GCA 90 bp | CTATATGACCACGTGGGACAGAGAGCTCACTCATGCCTCTCCTTTGCATCTGCCCAAGGCTGCAGTAGCTaGAGACCAGAGGACAGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: LYDHVGQRAHSCLSFASAQGCSS*RPEDSK Trigger: CTTGCTGTCCTCTGGTCTGCAGCTACTGCAGCCTTG...GGCAGATGCAAAGGAGAGGCATGAGTGAGCTCTCTGTCCCACGTGGTCATATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR-3UTR CCA 90 bp | CACGTGGGACAGAGAGCTCACTCATGCCTCTCCTTTGCATCTGCCTTCTGCTCAAGAAACTTACAGTGGTaGGTGAGGGTTCCCAGACCT | + |
|
Preference number: 2 (lower is better) Translates to: HVGQRAHSCLSFASAFCSRNLQW*VRVPRP Trigger: AGGTCTGGGAACCCTCACCCACCACTGTAAGTTTCT...TGAGCAGAAGGCAGATGCAAAGGAGAGGCATGAGTGAGCTCTCTGTCCCACGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR-3UTR TCA 90 bp | CATTCCATACTTGTTCTGCCCGGATCTCCCATGGTTTACTATGGGTGGTTGAATACTTACAGTGGTGGGTaGGGGTTCCCAGACCTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: HSILVLPGSPMVYYGWLNTYSGG*GFPDLS Trigger: GCTGAGGTCTGGGAACCCTCACCCACCACTGTAAGT...ATTCAACCACCCATAGTAAACCATGGGAGATCCGGGCAGAACAAGTATGGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR-3UTR GCA 90 bp | GTACTGGAGGCTTCTTATGTTGTTGTTTCAGCTGGGTCCCCTTCAGTGTCCATTTTCCTCCCCTTGCTCTaGACTTCTCCACCCCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: VLEASYVVVSAGSPSVSIFLPLL*TSPPLP Trigger: AGGAAGGGGTGGAGAAGTGCAGAGCAAGGGGAGGAA...AATGGACACTGAAGGGGACCCAGCTGAAACAACAACATAAGAAGCCTCCAGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR CAA 90 bp | TGCTATATGACCACGTGGGACAGAGAGCTCACTCATGCCTCTCCTTaGCATCTGCCTTCTGCTCATCCTTTCCTCTTTCCTTGTGGTACT | + |
|
Preference number: 2 (lower is better) Translates to: CYMTTWDRELTHASP*HLPSAHPFLFPCGT Trigger: AGTACCACAAGGAAAGAGGAAAGGATGAGCAGAAGGCAGATGCAAAGGAGAGGCATGAGTGAGCTCTCTGTCCCACGTGGTCATATAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGAGAGAGACCTTTTCTGAATTTTCTGAGGCTGTACCTAGGTACTGTCAGCAAGTGGCACTGAACTCCTaGTCCTCCTGCCTCAACCTG | + |
|
Preference number: 2 (lower is better) Translates to: VRETFSEFSEAVPRYCQQVALNS*SSCLNL Trigger: CAGGTTGAGGCAGGAGGATCAGGAGTTCAGTGCCAC...TTGCTGACAGTACCTAGGTACAGCCTCAGAAAATTCAGAAAAGGTCTCTCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR-3UTR GCA 90 bp | CATTCCATACTTGTTCTGCCCGGATCTCCCATGGTTTACTATGGGTGGTTGAATATGAGTCCAAGCTTGTaGTATATGACCACGTGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: HSILVLPGSPMVYYGWLNMSPSL*YMTTWD Trigger: GTCCCACGTGGTCATATAGCACAAGCTTGGACTCAT...ATTCAACCACCCATAGTAAACCATGGGAGATCCGGGCAGAACAAGTATGGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTAGCTCTGTAGGTTTGCCTGAGGTAAGGAGTCCTGGGTTCCACACACAGAACCAGAGAAATAACAAATaGCAGGAGACTGTGTCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: CSSVGLPEVRSPGFHTQNQRNNK*QETVSR Trigger: TCTTGACACAGTCTCCTGCCATTTGTTATTTCTCTG...GTTCTGTGTGTGGAACCCAGGACTCCTTACCTCAGGCAAACCTACAGAGCTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR CAA 90 bp | GACCACCAAGGAGGTATGATACTTAACAGAACCATTTTTCCTTGGTaGTTTGGCTTGGCTTTTGAGACAGGGTTTCATGGAGCAGTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: DHQGGMILNRTIFPW*FGLAFETGFHGAVG Trigger: ACCCACTGCTCCATGAAACCCTGTCTCAAAAGCCAAGCCAAACAACCAAGGAAAAATGGTTCTGTTAAGTATCATACCTCCTTGGTGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR CAA 90 bp | TCATCCTTTCCTCTTTCCTTGTGGTACTGGAGGCTTCTTATGTTGTaGTTTCAGCTGGGTCCCCTTCAGTGTCCATTACTTTCCTTAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SSFPLSLWYWRLLML*FQLGPLQCPLLSLV Trigger: GACTAAGGAAAGTAATGGACACTGAAGGGGACCCAGCTGAAACAACAACATAAGAAGCCTCCAGTACCACAAGGAAAGAGGAAAGGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR CAA 90 bp | TGCTCATCCTTTCCTCTTTCCTTGTGGTACTGGAGGCTTCTTATGTaGTTGTTTCAGCTGGGTCCCCTTCAGTGTCCATTACTTTCCTTA | + |
|
Preference number: 2 (lower is better) Translates to: CSSFPLSLWYWRLLM*LFQLGPLQCPLLSL Trigger: TAAGGAAAGTAATGGACACTGAAGGGGACCCAGCTGAAACAACAACATAAGAAGCCTCCAGTACCACAAGGAAAGAGGAAAGGATGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR-3UTR CCA 90 bp | AACAAACAGAGAAATAACAAATGGCAGGAGACTGTGTCAAGACACACAAAACTAAGAACCATTTTTCCTTaGTTGTTTGGCTTGGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: NKQRNNKWQETVSRHTKLRTIFP*LFGLAF Trigger: AAAAGCCAAGCCAAACAACCAAGGAAAAATGGTTCT...TAGTTTTGTGTGTCTTGACACAGTCTCCTGCCATTTGTTATTTCTCTGTTTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR TCA 72 bp | TGGGTGAGGGTTCCCAGACCTCAGCACTCCAGAGGCTaGGACGAGAGTATGGCAAACTTAGTTAATTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: WVRVPRPQHSRG*DESMANLVNSR Trigger: CCTGGAATTAACTAAGTTTGCCATACTCTCGTCTCAGCCTCTGGAGTGCTGAGGTCTGGGAACCCTCACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR GCA 72 bp | GGGTCCCCTTCAGTGTCCATTACTTTCCTTAGTCTTTaGGTCACAGTGCAGCCCGGAGGAATGGCTCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GSPSVSITFLSL*VTVQPGGMALF Trigger: AAAGAGAGCCATTCCTCCGGGCTGCACTGTGACGCAAAGACTAAGGAAAGTAATGGACACTGAAGGGGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR CCA 72 bp | AGGTACTGTCAGCAAAAGCTCTCGCACATATCTGAATaGGAAGGGCTCGCTGACAAGGCTGCAGTAGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: RYCQQKLSHISE*EGLADKAAVAA Trigger: TGCAGCTACTGCAGCCTTGTCAGCGAGCCCTTCCCATTCAGATATGTGCGAGAGCTTTTGCTGACAGTACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR GCA 72 bp | AGAGCTCACTCATGCCTCTCCTTTGCATCTGCCTTCTaGTCATCCTTTCCTCTTTCCTTGTGGTACTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RAHSCLSFASAF*SSFPLSLWYWR Trigger: CCTCCAGTACCACAAGGAAAGAGGAAAGGATGAGCAGAAGGCAGATGCAAAGGAGAGGCATGAGTGAGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGCTCTGTAGGTTTGCCTGAGGTAAGGAGTCCTGGGTTCCACACACAGAACTGTTTGGCTTGGCTTTaGAGACAGGGTTTCATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: CSSVGLPEVRSPGFHTQNCLAWL*RQGFME Trigger: CTCCATGAAACCCTGTCTCAAAAGCCAAGCCAAACA...GTTCTGTGTGTGGAACCCAGGACTCCTTACCTCAGGCAAACCTACAGAGCTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR CCA 72 bp | GCCTTCTGCTCATCCTTTCCTCTTTCCTTGTGGTACTaGAGGCTTCTTATGTTGTTGTTTCAGCTGGGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: AFCSSFPLSLWY*RLLMLLFQLGP Trigger: GGGACCCAGCTGAAACAACAACATAAGAAGCCTCCAGTACCACAAGGAAAGAGGAAAGGATGAGCAGAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR CCA 72 bp | TCCTTAGTCTTTGCGTCACAGTGCAGCCCGGAGGAATaGCTCTCTTTATTACTCCTCTGTTCCATAGACGTT | + |
|
Preference number: 3 (lower is better) Translates to: SLVFASQCSPEE*LSLLLLCSIDV Trigger: AACGTCTATGGAACAGAGGAGTAATAAAGAGAGCCATTCCTCCGGGCTGCACTGTGACGCAAAGACTAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR CCA 72 bp | CTTGTTCTGCCCGGATCTCCCATGGTTTACTATGGGTaGTTGAATATTCTCCTCATGAGTCCAAGCTTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LVLPGSPMVYYG*LNILLMSPSLC Trigger: GCACAAGCTTGGACTCATGAGGAGAATATTCAACCACCCATAGTAAACCATGGGAGATCCGGGCAGAACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR CCA 72 bp | CATACTTGTTCTGCCCGGATCTCCCATGGTTTACTATaGGTGGTTGAATATTCTCCTCATGAGTCCAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: HTCSARISHGLL*VVEYSPHESKL Trigger: AAGCTTGGACTCATGAGGAGAATATTCAACCACCCATAGTAAACCATGGGAGATCCGGGCAGAACAAGTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACCTCGCTACAATAGCTGTCCTTCCAGAAAAAGACAACTGACCACCAAGGAGTTTTTCCTTGGTTGTTaGGCTTGGCTTTTGAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: KPRYNSCPSRKRQLTTKEFFLGC*AWLLRQ Trigger: CTGTCTCAAAAGCCAAGCCAAACAACCAAGGAAAAA...CTCCTTGGTGGTCAGTTGTCTTTTTCTGGAAGGACAGCTATTGTAGCGAGGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR TCA 72 bp | GAAAATCCTGTGCTCAACGACCCATGTCAAAGAGAATaGGGGGTTCAATCATTACAGTTGTGGGTCTGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ENPVLNDPCQRE*GVQSLQLWVCV Trigger: TACACAGACCCACAACTGTAATGATTGAACCCCTCATTCTCTTTGACATGGGTCGTTGAGCACAGGATTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR CCA 72 bp | TACTTAACAGAACCATTTTTCCTTGGTTGTTTGGCTTaGCTTTTGAGACAGGGTTTCATGGAGCAGTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: YLTEPFFLGCLA*LLRQGFMEQWV Trigger: CACCCACTGCTCCATGAAACCCTGTCTCAAAAGCCAAGCCAAACAACCAAGGAAAAATGGTTCTGTTAAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR TCA 72 bp | GTGTCAAGACACACAAAACTAAAGGGAGCAGCAAAGTaGGCACTATTAGAACAGAGACAGCTGGTAATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: VSRHTKLKGAAK*ALLEQRQLVMD Trigger: ATCCATTACCAGCTGTCTCTGTTCTAATAGTGCTCACTTTGCTGCTCCCTTTAGTTTTGTGTGTCTTGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACACAAAACTAAAGGGAGCAGCAAAGTGAGCACTATTAGAACAGAGACAGCTACCATTTTTCCTTGGTaGTTTGGCTTGGCTTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: THKTKGSSKVSTIRTETATIFPW*FGLAFE Trigger: CTCAAAAGCCAAGCCAAACAACCAAGGAAAAATGGT...AGCTGTCTCTGTTCTAATAGTGCTCACTTTGCTGCTCCCTTTAGTTTTGTGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTGCTCATCCTTTCCTCTTTCCTTGTGGTACTGGAGGCTTCTTATGTTGTTGTTCAATCATTACAGTaGTGGGTCTGTGTAAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LLLILSSFLVVLEASYVVVQSLQ*WVCVKS Trigger: GCTTTTTACACAGACCCACAACTGTAATGATTGAAC...AACAACATAAGAAGCCTCCAGTACCACAAGGAAAGAGGAAAGGATGAGCAGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR TCA 72 bp | CCTTCCAGAAAAAGACAACTGACCACCAAGGAGGTATaGTACTTAACAGAACCATTTTTCCTTGGTTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PSRKRQLTTKEV*YLTEPFFLGCL Trigger: CAAACAACCAAGGAAAAATGGTTCTGTTAAGTATCATACCTCCTTGGTGGTCAGTTGTCTTTTTCTGGAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| CDS-3UTR CCA 90 bp | CACGTGGGACAGAGAGCTCACTCATGCCTCTCCTTTGCATCTGCCTTCTGCTCAACCGTCACGCCTGGCTaGACATGGTTTTCTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HVGQRAHSCLSFASAFCSTVTPG*TWFSLP Trigger: AGGCAAAGAAAACCATGTCCAGCCAGGCGTGACGGT...TGAGCAGAAGGCAGATGCAAAGGAGAGGCATGAGTGAGCTCTCTGTCCCACGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| CDS-3UTR GCA 90 bp | CACGTGGGACAGAGAGCTCACTCATGCCTCTCCTTTGCATCTGCCTTCTGCTCAGGACATGGTTTTCTTTaGCTCACAACCTTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HVGQRAHSCLSFASAFCSGHGFL*LTTFQG Trigger: GCCCTGGAAGGTTGTGAGGCAAAGAAAACCATGTCC...TGAGCAGAAGGCAGATGCAAAGGAGAGGCATGAGTGAGCTCTCTGTCCCACGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| CDS-3UTR TCA 90 bp | GGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTCACAGAATGTTCGGTGGGCCGTCTGCCTaGAGGCCATCCCACACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GQLHVWISKISHNIHRMFGGPSA*RPSHTP Trigger: AGGAGTGTGGGATGGCCTTCAGGCAGACGGCCCACC...GAACATTCTGTGAATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| CDS-3UTR TCA 90 bp | CCACTTATGCCAGGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTGGTGCGCCAACTGCCTaGAGGCCTTCCCACACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLMPGQLHVWISKISHNIGAPTA*RPSHTP Trigger: AGGAGTGTGGGAAGGCCTTCAGGCAGTTGGCGCACC...AATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACCTGGCATAAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| 3UTR CAA 72 bp | ACAGAACCATTTTTCCTTGGTTGTTTGGCTTGGCTTTaGAGACAGGGTTTCATGGAGCAGTGGGTGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TEPFFLGCLAWL*RQGFMEQWVAL Trigger: CAGTGCCACCCACTGCTCCATGAAACCCTGTCTCAAAAGCCAAGCCAAACAACCAAGGAAAAATGGTTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| CDS-3UTR TCA 90 bp | GGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTCACAGAATGTTCGGTGCGCCAACTGCCTaGAGGCCTTCCCACACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GQLHVWISKISHNIHRMFGAPTA*RPSHTP Trigger: AGGAGTGTGGGAAGGCCTTCAGGCAGTTGGCGCACC...GAACATTCTGTGAATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| CDS-3UTR GCA 90 bp | CCACTTATGCCAGGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTGTAAGGTGGGCCGTCTaGCTGAAGGCCATCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PLMPGQLHVWISKISHNIVRWAV*LKAIPH Trigger: GTGTGGGATGGCCTTCAGGCAGACGGCCCACCTTAC...AATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACCTGGCATAAGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| CDS-3UTR TCA 90 bp | CCACTTATGCCAGGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTGCTGTGAGTAGCGACTaGACGCCTTCCAGCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLMPGQLHVWISKISHNIAVSSD*TPSSTP Trigger: AGGAGTGCTGGAAGGCGTTCAGTCGCTACTCACAGC...AATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACCTGGCATAAGTGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| CDS-3UTR GCA 90 bp | GGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTCACAGAATGTTCGTAAGGTGGGCCGTCTaGCTGAAGGCCATCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GQLHVWISKISHNIHRMFVRWAV*LKAIPH Trigger: GTGTGGGATGGCCTTCAGGCAGACGGCCCACCTTAC...GAACATTCTGTGAATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| CDS-3UTR CCA 90 bp | CCACTTATGCCAGGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTCCAGAATGCAGTCTCTaGTGCCTGGTAAGGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLMPGQLHVWISKISHNIPECSL*CLVRWA Trigger: GGCCCACCTTACCAGGCACCAGAGACTGCATTCTGG...AATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACCTGGCATAAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| 3UTR CAA 72 bp | GTTCTGCCCGGATCTCCCATGGTTTACTATGGGTGGTaGAATATTCTCCTCATGAGTCCAAGCTTGTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VLPGSPMVYYGW*NILLMSPSLCY Trigger: ATAGCACAAGCTTGGACTCATGAGGAGAATATTCAACCACCCATAGTAAACCATGGGAGATCCGGGCAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| CDS-3UTR TCA 90 bp | CCACTTATGCCAGGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTCTGAGATACCCCTCCTaGGGGTCCTCTTGTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLMPGQLHVWISKISHNILRYPS*GSSCLS Trigger: GGAAAGACAAGAGGACCCTCAGGAGGGGTATCTCAG...AATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACCTGGCATAAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| CDS-3UTR TCA 90 bp | GGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTCACAGAATGTTCGCTGTGAGTAGCGACTaGACGCCTTCCAGCACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GQLHVWISKISHNIHRMFAVSSD*TPSSTP Trigger: AGGAGTGCTGGAAGGCGTTCAGTCGCTACTCACAGC...GAACATTCTGTGAATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| CDS-3UTR GCA 90 bp | GGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTCACAGAATGTTCGAATGCAGTCTCTGGTaGCTGGTAAGGTGGGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: GQLHVWISKISHNIHRMFECSLW*LVRWAV Trigger: GACGGCCCACCTTACCAGGCACCAGAGACTGCATTC...GAACATTCTGTGAATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| CDS-3UTR GCA 90 bp | CCACTTATGCCAGGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTGTGAAGCTTCTGATGTaGTCTGAGCTCGGGGCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: PLMPGQLHVWISKISHNIVKLLM*SELGAV Trigger: TACGGCCCCGAGCTCAGAGCACATCAGAAGCTTCAC...AATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACCTGGCATAAGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| CDS-3UTR CCA 90 bp | GACTGTGTCAAGACACACAAAACTAAAGGGAGCAGCAAAGTGAGCACTATTAGAACGCCTGGCTGGACATaGTTTTCTTTGCCTCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: DCVKTHKTKGSSKVSTIRTPGWT*FSLPHN Trigger: GTTGTGAGGCAAAGAAAACCATGTCCAGCCAGGCGT...TCTAATAGTGCTCACTTTGCTGCTCCCTTTAGTTTTGTGTGTCTTGACACAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| 3UTR CAA 72 bp | TTTCCTCTTTCCTTGTGGTACTGGAGGCTTCTTATGTaGTTGTTTCAGCTGGGTCCCCTTCAGTGTCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: FPLSLWYWRLLM*LFQLGPLQCPL Trigger: TAATGGACACTGAAGGGGACCCAGCTGAAACAACAACATAAGAAGCCTCCAGTACCACAAGGAAAGAGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| CDS-3UTR TCA 90 bp | GGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTCACAGAATGTTCCTGAGATACCCCTCCTaGGGGTCCTCTTGTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQLHVWISKISHNIHRMFLRYPS*GSSCLS Trigger: GGAAAGACAAGAGGACCCTCAGGAGGGGTATCTCAG...GAACATTCTGTGAATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| CDS-3UTR TCA 90 bp | CCACTTATGCCAGGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTGGCTTTTCGCCAGTATaGATACTCTGGTGGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLMPGQLHVWISKISHNIGFSPV*ILWWRA Trigger: TGCTCTCCACCAGAGTATTCATACTGGCGAAAAGCC...AATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACCTGGCATAAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| 3UTR CAA 72 bp | ATACTTAACAGAACCATTTTTCCTTGGTTGTTTGGCTaGGCTTTTGAGACAGGGTTTCATGGAGCAGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILNRTIFPWLFG*AFETGFHGAVG Trigger: ACCCACTGCTCCATGAAACCCTGTCTCAAAAGCCAAGCCAAACAACCAAGGAAAAATGGTTCTGTTAAGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| CDS-3UTR TCA 90 bp | GGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTCACAGAATGTTCGGCTTTTCGCCAGTATaGATACTCTGGTGGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GQLHVWISKISHNIHRMFGFSPV*ILWWRA Trigger: TGCTCTCCACCAGAGTATTCATACTGGCGAAAAGCC...GAACATTCTGTGAATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| CDS-3UTR GCA 90 bp | GGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTCACAGAATGTTCGGACATGGTTTTCTTTaGCTCACAACCTTCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GQLHVWISKISHNIHRMFGHGFL*LTTFQG Trigger: GCCCTGGAAGGTTGTGAGGCAAAGAAAACCATGTCC...GAACATTCTGTGAATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080834.15 |
||
| 3UTR CAA 72 bp | GGAGGTATGATACTTAACAGAACCATTTTTCCTTGGTaGTTTGGCTTGGCTTTTGAGACAGGGTTTCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGMILNRTIFPW*FGLAFETGFHG Trigger: TCCATGAAACCCTGTCTCAAAAGCCAAGCCAAACAACCAAGGAAAAATGGTTCTGTTAAGTATCATACCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| CDS-3UTR TCA 90 bp | CCACTTATGCCAGGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTCCAATATGGATGCTCTaGTGCGAAATAAGCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLMPGQLHVWISKISHNIPIWML*CEISCE Trigger: CTCACAGCTTATTTCGCATCAGAGCATCCATATTGG...AATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACCTGGCATAAGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| CDS-3UTR TCA 90 bp | CCACTTATGCCAGGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTTGGAGAGCAAGTTTCTaGCGCAATCTGAAAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLMPGQLHVWISKISHNIWRASF*RNLKDF Trigger: GAAGTCTTTCAGATTGCGTCAGAAACTTGCTCTCCA...AATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACCTGGCATAAGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| CDS-3UTR TCA 90 bp | GGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTCACAGAATGTTCCCAATATGGATGCTCTaGTGCGAAATAAGCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GQLHVWISKISHNIHRMFPIWML*CEISCE Trigger: CTCACAGCTTATTTCGCATCAGAGCATCCATATTGG...GAACATTCTGTGAATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| CDS-3UTR TCA 90 bp | GGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTCACAGAATGTTCTGGAGAGCAAGTTTCTaGCGCAATCTGAAAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GQLHVWISKISHNIHRMFWRASF*RNLKDF Trigger: GAAGTCTTTCAGATTGCGTCAGAAACTTGCTCTCCA...GAACATTCTGTGAATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| CDS-3UTR CCA 90 bp | CCACTTATGCCAGGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTTTCCGAATCTGGACATaGTTTTCTTTGCCTCACAAC | + |
|
Preference number: 4 (lower is better) Translates to: PLMPGQLHVWISKISHNIFRIWT*FSLPHN Trigger: GTTGTGAGGCAAAGAAAACCATGTCCAGATTCGGAA...AATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACCTGGCATAAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080834.15 |
||
| CDS-3UTR TCA 90 bp | CCACTTATGCCAGGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTATAAATACCATTTTCTaGGAACACCTGGTTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLMPGQLHVWISKISHNIINTIF*EHLVGL Trigger: GAGACCAACCAGGTGTTCTCAGAAAATGGTATTTAT...AATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACCTGGCATAAGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| CDS-3UTR TCA 90 bp | GGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTCACAGAATGTTCATAAATACCATTTTCTaGGAACACCTGGTTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQLHVWISKISHNIHRMFINTIF*EHLVGL Trigger: GAGACCAACCAGGTGTTCTCAGAAAATGGTATTTAT...GAACATTCTGTGAATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| CDS-3UTR CCA 90 bp | GGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTCACAGAATGTTCCTTAGTTTCCGAATCTaGACATGGTTTTCTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GQLHVWISKISHNIHRMFLSFRI*TWFSLP Trigger: AGGCAAAGAAAACCATGTCCAGATTCGGAAACTAAG...GAACATTCTGTGAATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080834.15 |
||
| CDS-3UTR CAA 90 bp | AGCAAAAGCTCTCGCACATATCTGAATGGGAAGGGCTCGCTGACAAGGCTGCAGTGGACATGGTTTTCTTaGCCTCACAACCTTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SKSSRTYLNGKGSLTRLQWTWFS*PHNLPG Trigger: CCCTGGAAGGTTGTGAGGCAAAGAAAACCATGTCCA...CTGCAGCCTTGTCAGCGAGCCCTTCCCATTCAGATATGTGCGAGAGCTTTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183190.2 |
||
| CDS TCA 90 bp | GCTTCTCATAAGAGGACACTCTTTCAGATGTGTGCCTCACTTGACTaGGATACCCCTCCTGAGGGTCCTCTTGTCTTTCCTGTTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ASHKRTLFQMCASLD*DTPPEGPLVFPVFF Trigger: GAAGAAAACAGGAAAGACAAGAGGACCCTCAGGAGGGGTATCTCAGTCAAGTGAGGCACACATCTGAAAGAGTGTCCTCTTATGAGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 ENSMUST00000183115.8 |
||
| CDS-3UTR CAA 90 bp | GGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTCACAGAATGTTCAGATGTGTGCCTCACTaGACTGAGATACCCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GQLHVWISKISHNIHRMFRCVPH*TEIPLL Trigger: CAGGAGGGGTATCTCAGTCAAGTGAGGCACACATCT...GAACATTCTGTGAATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| CDS-3UTR CAA 90 bp | GGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTCACAGAATGTTCTGGACATGGTTTTCTTaGCCTCACAACCTTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GQLHVWISKISHNIHRMFWTWFS*PHNLPG Trigger: CCCTGGAAGGTTGTGAGGCAAAGAAAACCATGTCCA...GAACATTCTGTGAATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080834.15 |
||
| CDS-3UTR CAA 90 bp | CCACTTATGCCAGGTCAGTTACATGTATGGATAAGCAAGATTAGCCATAACATTCTCCTGAGGGTCCTCTaGTCTTTCCTGTTTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PLMPGQLHVWISKISHNILLRVL*SFLFSS Trigger: AGAAGAAAACAGGAAAGACAAGAGGACCCTCAGGAG...AATGTTATGGCTAATCTTGCTTATCCATACATGTAACTGACCTGGCATAAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| CDS TCA 72 bp | TTACACTCGTACAGTCTGTCGACGACATTAAGCTTCTaGTGGCGAGTGAGGTGCGCCAACTGCCTGAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LHSYSLSTTLSF*WRVRCANCLKA Trigger: GGCCTTCAGGCAGTTGGCGCACCTCACTCGCCATCAGAAGCTTAATGTCGTCGACAGACTGTACGAGTGTAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 |
||
| CDS CAA 90 bp | TGCGCGCTTCTCATAAGAGGACACTCTTTCAGATGTGTGCCTCACTaGACTGAGATACCCCTCCTGAGGGTCCTCTTGTCTTTCCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: CALLIRGHSFRCVPH*TEIPLLRVLLSFLF Trigger: AAACAGGAAAGACAAGAGGACCCTCAGGAGGGGTATCTCAGTCAAGTGAGGCACACATCTGAAAGAGTGTCCTCTTATGAGAAGCGCGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 ENSMUST00000183115.8 |
||
| CDS TCA 72 bp | AAGAGGACACTCTTTCAGATGTGTGCCTCACTTGACTaGGATACCCCTCCTGAGGGTCCTCTTGTCTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: KRTLFQMCASLD*DTPPEGPLVFP Trigger: AGGAAAGACAAGAGGACCCTCAGGAGGGGTATCTCAGTCAAGTGAGGCACACATCTGAAAGAGTGTCCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080834.15 ENSMUST00000182546.8 ENSMUST00000183115.8 |
||