Pregenerated sensors for ZFP819 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055102Ensembl transcript IDs: ENSMUST00000032661.14, ENSMUST00000116324.3, ENSMUST00000120935.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTCCAAGTATCTATAGTGTCAGGTCTGCTGGGTCTACTGAAATCTaGCTTGTGTTTGGAGGACTTTCTGCATTCAAAACCCACCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: GPSIYSVRSAGSTEI*LVFGGLSAFKTHLR Trigger: CCTGAGGTGGGTTTTGAATGCAGAAAGTCCTCCAAACACAAGTCAGATTTCAGTAGACCCAGCAGACCTGACACTATAGATACTTGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| 3UTR CAA 90 bp | CCTCAGGTTTCTCTGCACAGAATGAAAGACGAGAGCCTTCAGCTGTaGAGAACTCTCTCAGTCAAGGTCATTTTCTTCTGCTTCAATCGG | + |
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Preference number: 2 (lower is better) Translates to: PQVSLHRMKDESLQL*RTLSVKVIFFCFNR Trigger: CCGATTGAAGCAGAAGAAAATGACCTTGACTGAGAGAGTTCTCAACAGCTGAAGGCTCTCGTCTTTCATTCTGTGCAGAGAAACCTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| 3UTR CAA 90 bp | TCTATAGTGTCAGGTCTGCTGGGTCTACTGAAATCTGACTTGTGTTaGGAGGACTTTCTGCATTCAAAACCCACCTCAGGTTTCTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: SIVSGLLGLLKSDLC*EDFLHSKPTSGFSA Trigger: TGCAGAGAAACCTGAGGTGGGTTTTGAATGCAGAAAGTCCTCCAAACACAAGTCAGATTTCAGTAGACCCAGCAGACCTGACACTATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| 3UTR CAA 90 bp | CAAGTATCTATAGTGTCAGGTCTGCTGGGTCTACTGAAATCTGACTaGTGTTTGGAGGACTTTCTGCATTCAAAACCCACCTCAGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: QVSIVSGLLGLLKSD*CLEDFLHSKPTSGF Trigger: GAAACCTGAGGTGGGTTTTGAATGCAGAAAGTCCTCCAAACACAAGTCAGATTTCAGTAGACCCAGCAGACCTGACACTATAGATACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTTCACAGGTCCAAGTATCTATAGTGTCAGGTCTGCTGGGTCTACTGAAATCAAGGTCATTTTCTTCTaGTTCAATCGGATGATGTCC | + |
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Preference number: 2 (lower is better) Translates to: PFTGPSIYSVRSAGSTEIKVIFF*FNRMMS Trigger: GGACATCATCCGATTGAAGCAGAAGAAAATGACCTT...GATTTCAGTAGACCCAGCAGACCTGACACTATAGATACTTGGACCTGTGAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGGTCTACTGAAATCTGACTTGTGTTTGGAGGACTTTCTGCATTCAAAACCCGAGAGCCTTCAGCTGTaGAGAACTCTCTCAGTCAAG | + |
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Preference number: 3 (lower is better) Translates to: LGLLKSDLCLEDFLHSKPESLQL*RTLSVK Trigger: CTTGACTGAGAGAGTTCTCAACAGCTGAAGGCTCTC...GGGTTTTGAATGCAGAAAGTCCTCCAAACACAAGTCAGATTTCAGTAGACCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| 3UTR TCA 72 bp | ATCTATAGTGTCAGGTCTGCTGGGTCTACTGAAATCTaGCTTGTGTTTGGAGGACTTTCTGCATTCAAAACC | + |
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Preference number: 3 (lower is better) Translates to: IYSVRSAGSTEI*LVFGGLSAFKT Trigger: GGTTTTGAATGCAGAAAGTCCTCCAAACACAAGTCAGATTTCAGTAGACCCAGCAGACCTGACACTATAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR CCA 90 bp | CCTTTCACAGGTCCAAGTATCTATAGTGTCAGGTCTGCTGGGTCTACTGAAATCTCCAGCAACACGTCCTaGTACAGGCGTCTCTGGGCG | + |
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Preference number: 4 (lower is better) Translates to: PFTGPSIYSVRSAGSTEISSNTS*YRRLWA Trigger: CGCCCAGAGACGCCTGTACCAGGACGTGTTGCTGGA...GATTTCAGTAGACCCAGCAGACCTGACACTATAGATACTTGGACCTGTGAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032661.14 |
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| CDS-3UTR CCA 90 bp | CAAAACCCACCTCAGGTTTCTCTGCACAGAATGAAAGACGAGAGCCTTCAGCTGGGAACACTTGCACATTaGTCCCCTCTGCGTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: QNPPQVSLHRMKDESLQLGTLAH*SPLRAS Trigger: GGAAGCACGCAGAGGGGACCAATGTGCAAGTGTTCC...CAGCTGAAGGCTCTCGTCTTTCATTCTGTGCAGAGAAACCTGAGGTGGGTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR GCA 90 bp | AAGCCTTTCACAGGTCCAAGTATCTATAGTGTCAGGTCTGCTGGGTCTACTGAACACATTGGTCCCCTCTaGGTGCTTCCTCTCCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: KPFTGPSIYSVRSAGSTEHIGPL*VLPLLC Trigger: GCACAGGAGAGGAAGCACGCAGAGGGGACCAATGTG...TTCAGTAGACCCAGCAGACCTGACACTATAGATACTTGGACCTGTGAAAGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR TCA 90 bp | TTTGTGGTAAAGCCTTTCACAGGTCCAAGTATCTATAGTGTCAGGTCTGCTGGGCACACACATTTGGTGTaGGTCATGCTCTGCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FVVKPFTGPSIYSVRSAGHTHLV*VMLCLP Trigger: GGGGAGGCAGAGCATGACTCACACCAAATGTGTGTG...CCCAGCAGACCTGACACTATAGATACTTGGACCTGTGAAAGGCTTTACCACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR TCA 90 bp | CTGACTTGTGTTTGGAGGACTTTCTGCATTCAAAACCCACCTCAGGTTTCTCTGCACACACATTTGGTGTaGGTCATGCTCTGCCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: LTCVWRTFCIQNPPQVSLHTHLV*VMLCLP Trigger: GGGGAGGCAGAGCATGACTCACACCAAATGTGTGTG...CAGAGAAACCTGAGGTGGGTTTTGAATGCAGAAAGTCCTCCAAACACAAGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR TCA 90 bp | AAGCCTTTCACAGGTCCAAGTATCTATAGTGTCAGGTCTGCTGGGTCTACTGAAGGTTTCTCCTTTGTGTaGGTTCCATGCCGTGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: KPFTGPSIYSVRSAGSTEGFSFV*VPCRAC Trigger: GCAGGCACGGCATGGAACTCACACAAAGGAGAAACC...TTCAGTAGACCCAGCAGACCTGACACTATAGATACTTGGACCTGTGAAAGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR GCA 90 bp | CAAAACCCACCTCAGGTTTCTCTGCACAGAATGAAAGACGAGAGCCTTCAGCTGGTGCTTCCTCTCCTGTaGTGTGAATTGGACACACAG | + |
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Preference number: 4 (lower is better) Translates to: QNPPQVSLHRMKDESLQLVLPLL*CELDTQ Trigger: CTGTGTGTCCAATTCACAGCACAGGAGAGGAAGCAC...CAGCTGAAGGCTCTCGTCTTTCATTCTGTGCAGAGAAACCTGAGGTGGGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR GCA 90 bp | TTCTGCTTCAATCGGATGATGTCCCTTCAGCTGATACGTATGAGCAAACAACTGCACATTGGTCCCCTCTaGGTGCTTCCTCTCCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: FCFNRMMSLQLIRMSKQLHIGPL*VLPLLC Trigger: GCACAGGAGAGGAAGCACGCAGAGGGGACCAATGTG...CAGTTGTTTGCTCATACGTATCAGCTGAAGGGACATCATCCGATTGAAGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR GCA 90 bp | CAAAACCCACCTCAGGTTTCTCTGCACAGAATGAAAGACGAGAGCCTTCAGCTGGACAACTGTGACTTGTaGAGGAAGCCCTTCCCACAT | + |
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Preference number: 4 (lower is better) Translates to: QNPPQVSLHRMKDESLQLDNCDL*RKPFPH Trigger: ATGTGGGAAGGGCTTCCTGCACAAGTCACAGTTGTC...CAGCTGAAGGCTCTCGTCTTTCATTCTGTGCAGAGAAACCTGAGGTGGGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR CCA 90 bp | CAAAACCCACCTCAGGTTTCTCTGCACAGAATGAAAGACGAGAGCCTTCAGCTGGCCTTCACACACATTTaGTGTGAGTCATGCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: QNPPQVSLHRMKDESLQLAFTHI*CESCSA Trigger: GGCAGAGCATGACTCACACCAAATGTGTGTGAAGGC...CAGCTGAAGGCTCTCGTCTTTCATTCTGTGCAGAGAAACCTGAGGTGGGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR CCA 90 bp | TTTGTGGTAAAGCCTTTCACAGGTCCAAGTATCTATAGTGTCAGGTCTGCTGGGCGTCAGGCTGCTCTGTaGCACTGCTTTGATGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: FVVKPFTGPSIYSVRSAGRQAAL*HCFDGL Trigger: GAGACCATCAAAGCAGTGCCACAGAGCAGCCTGACG...CCCAGCAGACCTGACACTATAGATACTTGGACCTGTGAAAGGCTTTACCACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR CCA 90 bp | CTGACTTGTGTTTGGAGGACTTTCTGCATTCAAAACCCACCTCAGGTTTCTCTGGCCGTGCCTGCAGGCTaGATGTACTGGGAAGTGATT | + |
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Preference number: 4 (lower is better) Translates to: LTCVWRTFCIQNPPQVSLAVPAG*MYWEVI Trigger: AATCACTTCCCAGTACATCCAGCCTGCAGGCACGGC...CAGAGAAACCTGAGGTGGGTTTTGAATGCAGAAAGTCCTCCAAACACAAGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR CCA 90 bp | TCTATAGTGTCAGGTCTGCTGGGTCTACTGAAATCTGACTTGTGTTTGGAGGACCTGAGAACTGAACTGTaGCTGAAGGCCCTTCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SIVSGLLGLLKSDLCLEDLRTEL*LKALPQ Trigger: CTGCGGAAGGGCCTTCAGCCACAGTTCAGTTCTCAG...GTCCTCCAAACACAAGTCAGATTTCAGTAGACCCAGCAGACCTGACACTATAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR TCA 90 bp | TTGTGTTTGGAGGACTTTCTGCATTCAAAACCCACCTCAGGTTTCTCTGCACAGCAGCCAGGACATCCATaGTGTGTCTCTCCTCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: LCLEDFLHSKPTSGFSAQQPGHP*CVSPLS Trigger: AGACAGAGGAGAGACACATCATGGATGTCCTGGCTG...CTGTGCAGAGAAACCTGAGGTGGGTTTTGAATGCAGAAAGTCCTCCAAACACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR TCA 90 bp | AAGCCTTTCACAGGTCCAAGTATCTATAGTGTCAGGTCTGCTGGGTCTACTGAAGGATGTACTGGGAAGTaGTTTCCGACAGCCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: KPFTGPSIYSVRSAGSTEGCTGK*FPTART Trigger: TGTCCTGGCTGTCGGAAATCACTTCCCAGTACATCC...TTCAGTAGACCCAGCAGACCTGACACTATAGATACTTGGACCTGTGAAAGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR TCA 90 bp | GAGGACTTTCTGCATTCAAAACCCACCTCAGGTTTCTCTGCACAGAATGAAAGAGGTTTCTCCTTTGTGTaGGTTCCATGCCGTGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: EDFLHSKPTSGFSAQNERGFSFV*VPCRAC Trigger: GCAGGCACGGCATGGAACTCACACAAAGGAGAAACC...TCTTTCATTCTGTGCAGAGAAACCTGAGGTGGGTTTTGAATGCAGAAAGTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR TCA 90 bp | AAGCCTTTCACAGGTCCAAGTATCTATAGTGTCAGGTCTGCTGGGTCTACTGAAATGTGTGCTGAGAACTaGACTGTGGCTGAAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: KPFTGPSIYSVRSAGSTEMCAEN*TVAEGP Trigger: AGGGCCTTCAGCCACAGTTCAGTTCTCAGCACACAT...TTCAGTAGACCCAGCAGACCTGACACTATAGATACTTGGACCTGTGAAAGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR GCA 90 bp | TTGTGTTTGGAGGACTTTCTGCATTCAAAACCCACCTCAGGTTTCTCTGCACAGGCTGCTCTGTGGCACTaGTTTGATGGTCTCTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: LCLEDFLHSKPTSGFSAQAALWH*FDGLCL Trigger: CAGACAGAGACCATCAAAGCAGTGCCACAGAGCAGC...CTGTGCAGAGAAACCTGAGGTGGGTTTTGAATGCAGAAAGTCCTCCAAACACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR GCA 90 bp | AGCCTTTCACAGGTCCAAGTATCTATAGTGTCAGGTCTGCTGGGTCTACTGAAAGACAAGAGTCAACAATaGCGTCAGGCTGCTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: SLSQVQVSIVSGLLGLLKDKSQQ*RQAALW Trigger: CCACAGAGCAGCCTGACGGCATTGTTGACTCTTGTC...TTTCAGTAGACCCAGCAGACCTGACACTATAGATACTTGGACCTGTGAAAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR CCA 90 bp | CCTTCAGCTGTTGAGAACTCTCTCAGTCAAGGTCATTTTCTTCTGCTTCAATCGCGTCAGGCTGCTCTGTaGCACTGCTTTGATGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: PSAVENSLSQGHFLLLQSRQAAL*HCFDGL Trigger: GAGACCATCAAAGCAGTGCCACAGAGCAGCCTGACG...CGATTGAAGCAGAAGAAAATGACCTTGACTGAGAGAGTTCTCAACAGCTGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR CCA 90 bp | CCTTCAGCTGTTGAGAACTCTCTCAGTCAAGGTCATTTTCTTCTGCTTCAATCGGGAACACTTGCACATTaGTCCCCTCTGCGTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: PSAVENSLSQGHFLLLQSGTLAH*SPLRAS Trigger: GGAAGCACGCAGAGGGGACCAATGTGCAAGTGTTCC...CGATTGAAGCAGAAGAAAATGACCTTGACTGAGAGAGTTCTCAACAGCTGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR CCA 90 bp | GTGTTTGGAGGACTTTCTGCATTCAAAACCCACCTCAGGTTTCTCTGCACAGAAGCAGGCTGGATGTACTaGGAAGTGATTTCCGACAGC | + |
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Preference number: 4 (lower is better) Translates to: VFGGLSAFKTHLRFLCTEAGWMY*EVISDS Trigger: GCTGTCGGAAATCACTTCCCAGTACATCCAGCCTGC...TTCTGTGCAGAGAAACCTGAGGTGGGTTTTGAATGCAGAAAGTCCTCCAAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR TCA 90 bp | GTGTTTGGAGGACTTTCTGCATTCAAAACCCACCTCAGGTTTCTCTGCACAGAATCAACTGGCTTGTCCTaGGAAAGAGTTCCATGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VFGGLSAFKTHLRFLCTESTGLS*ERVPCC Trigger: GCAGCATGGAACTCTTTCTCAGGACAAGCCAGTTGA...TTCTGTGCAGAGAAACCTGAGGTGGGTTTTGAATGCAGAAAGTCCTCCAAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR TCA 90 bp | TCAGGTCTGCTGGGTCTACTGAAATCTGACTTGTGTTTGGAGGACTTTCTGCATTCAACTGGCTTGTCCTaGGAAAGAGTTCCATGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SGLLGLLKSDLCLEDFLHSTGLS*ERVPCC Trigger: GCAGCATGGAACTCTTTCTCAGGACAAGCCAGTTGA...ATGCAGAAAGTCCTCCAAACACAAGTCAGATTTCAGTAGACCCAGCAGACCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR TCA 90 bp | GAGAACTCTCTCAGTCAAGGTCATTTTCTTCTGCTTCAATCGGATGATGTCCCTCAGCCAGGACATCCATaGTGTGTCTCTCCTCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: ENSLSQGHFLLLQSDDVPQPGHP*CVSPLS Trigger: AGACAGAGGAGAGACACATCATGGATGTCCTGGCTG...AGGGACATCATCCGATTGAAGCAGAAGAAAATGACCTTGACTGAGAGAGTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR TCA 90 bp | CTTTCACAGGTCCAAGTATCTATAGTGTCAGGTCTGCTGGGTCTACTGAAATCTGGATGTACTGGGAAGTaGTTTCCGACAGCCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: LSQVQVSIVSGLLGLLKSGCTGK*FPTART Trigger: TGTCCTGGCTGTCGGAAATCACTTCCCAGTACATCC...AGATTTCAGTAGACCCAGCAGACCTGACACTATAGATACTTGGACCTGTGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR GCA 90 bp | CTGACTTGTGTTTGGAGGACTTTCTGCATTCAAAACCCACCTCAGGTTTCTCTGAATGGATCCCCCAGCTaGTTCACGTCCATCTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: LTCVWRTFCIQNPPQVSLNGSPS*FTSICD Trigger: ATCACAGATGGACGTGAAGCAGCTGGGGGATCCATT...CAGAGAAACCTGAGGTGGGTTTTGAATGCAGAAAGTCCTCCAAACACAAGTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR GCA 90 bp | CCTTCAGCTGTTGAGAACTCTCTCAGTCAAGGTCATTTTCTTCTGCTTCAATCGGACAAGAGTCAACAATaGCGTCAGGCTGCTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: PSAVENSLSQGHFLLLQSDKSQQ*RQAALW Trigger: CCACAGAGCAGCCTGACGGCATTGTTGACTCTTGTC...CGATTGAAGCAGAAGAAAATGACCTTGACTGAGAGAGTTCTCAACAGCTGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR GCA 90 bp | CCTTTCACAGGTCCAAGTATCTATAGTGTCAGGTCTGCTGGGTCTACTGAAATCGTGCTTCCTCTCCTGTaGTGTGAATTGGACACACAG | + |
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Preference number: 4 (lower is better) Translates to: PFTGPSIYSVRSAGSTEIVLPLL*CELDTQ Trigger: CTGTGTGTCCAATTCACAGCACAGGAGAGGAAGCAC...GATTTCAGTAGACCCAGCAGACCTGACACTATAGATACTTGGACCTGTGAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR GCA 90 bp | CAATCGGATGATGTCCCTTCAGCTGATACGTATGAGCAAACAACTGCACACAACGACAACTGTGACTTGTaGAGGAAGCCCTTCCCACAT | + |
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Preference number: 4 (lower is better) Translates to: QSDDVPSADTYEQTTAHNDNCDL*RKPFPH Trigger: ATGTGGGAAGGGCTTCCTGCACAAGTCACAGTTGTC...GTTGTGTGCAGTTGTTTGCTCATACGTATCAGCTGAAGGGACATCATCCGATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR CCA 90 bp | AAGCCTTTCACAGGTCCAAGTATCTATAGTGTCAGGTCTGCTGGGTCTACTGAATCCTGTGCTGTGAATTaGACACACAGCAGTGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: KPFTGPSIYSVRSAGSTESCAVN*THSSGK Trigger: CTTCCCACTGCTGTGTGTCCAATTCACAGCACAGGA...TTCAGTAGACCCAGCAGACCTGACACTATAGATACTTGGACCTGTGAAAGGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR CCA 90 bp | GTTGAGAACTCTCTCAGTCAAGGTCATTTTCTTCTGCTTCAATCGGATGATGTCGCCGTGCCTGCAGGCTaGATGTACTGGGAAGTGATT | + |
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Preference number: 4 (lower is better) Translates to: VENSLSQGHFLLLQSDDVAVPAG*MYWEVI Trigger: AATCACTTCCCAGTACATCCAGCCTGCAGGCACGGC...GACATCATCCGATTGAAGCAGAAGAAAATGACCTTGACTGAGAGAGTTCTCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR CCA 90 bp | AGAACTCTCTCAGTCAAGGTCATTTTCTTCTGCTTCAATCGGATGATGTCCCTTCTGAGAACTGAACTGTaGCTGAAGGCCCTTCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: RTLSVKVIFFCFNRMMSLLRTEL*LKALPQ Trigger: CTGCGGAAGGGCCTTCAGCCACAGTTCAGTTCTCAG...AAGGGACATCATCCGATTGAAGCAGAAGAAAATGACCTTGACTGAGAGAGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR TCA 90 bp | CAAAACCCACCTCAGGTTTCTCTGCACAGAATGAAAGACGAGAGCCTTCAGCTGCTGTCTGTTCCTGGATaGAAACTCAACTCAGATTTC | + |
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Preference number: 4 (lower is better) Translates to: QNPPQVSLHRMKDESLQLLSVPG*KLNSDF Trigger: GAAATCTGAGTTGAGTTTTCATCCAGGAACAGACAG...CAGCTGAAGGCTCTCGTCTTTCATTCTGTGCAGAGAAACCTGAGGTGGGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR TCA 90 bp | CTTTCACAGGTCCAAGTATCTATAGTGTCAGGTCTGCTGGGTCTACTGAAATCTGGATGCATAACTGAATaGCTTCCCACAGTCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LSQVQVSIVSGLLGLLKSGCITE*LPTVRA Trigger: TGCCCTGACTGTGGGAAGTCATTCAGTTATGCATCC...AGATTTCAGTAGACCCAGCAGACCTGACACTATAGATACTTGGACCTGTGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR TCA 90 bp | GAGGACTTTCTGCATTCAAAACCCACCTCAGGTTTCTCTGCACAGAATGAAAGAGGATGCATAACTGAATaGCTTCCCACAGTCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: EDFLHSKPTSGFSAQNERGCITE*LPTVRA Trigger: TGCCCTGACTGTGGGAAGTCATTCAGTTATGCATCC...TCTTTCATTCTGTGCAGAGAAACCTGAGGTGGGTTTTGAATGCAGAAAGTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR TCA 90 bp | GTTGAGAACTCTCTCAGTCAAGGTCATTTTCTTCTGCTTCAATCGGATGATGTCATGTGTGCTGAGAACTaGACTGTGGCTGAAGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VENSLSQGHFLLLQSDDVMCAEN*TVAEGP Trigger: AGGGCCTTCAGCCACAGTTCAGTTCTCAGCACACAT...GACATCATCCGATTGAAGCAGAAGAAAATGACCTTGACTGAGAGAGTTCTCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR GCA 90 bp | TCTATAGTGTCAGGTCTGCTGGGTCTACTGAAATCTGACTTGTGTTTGGAGGACGGTGGGATGTGGTTTTaGGGATCTGAAGTTTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SIVSGLLGLLKSDLCLEDGGMWF*GSEVLG Trigger: CCCTAAAACTTCAGATCCGCAAAACCACATCCCACC...GTCCTCCAAACACAAGTCAGATTTCAGTAGACCCAGCAGACCTGACACTATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGTCTGCTGGGTCTACTGAAATCTGACTTGTGTTTGGAGGACTTTCTGCATGGTGGGATGTGGTTTTaGGGATCTGAAGTTTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGLLGLLKSDLCLEDFLHGGMWF*GSEVLG Trigger: CCCTAAAACTTCAGATCCGCAAAACCACATCCCACC...ATGCAGAAAGTCCTCCAAACACAAGTCAGATTTCAGTAGACCCAGCAGACCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR GCA 90 bp | GAGAACTCTCTCAGTCAAGGTCATTTTCTTCTGCTTCAATCGGATGATGTCCCTAATGGATCCCCCAGCTaGTTCACGTCCATCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ENSLSQGHFLLLQSDDVPNGSPS*FTSICD Trigger: ATCACAGATGGACGTGAAGCAGCTGGGGGATCCATT...AGGGACATCATCCGATTGAAGCAGAAGAAAATGACCTTGACTGAGAGAGTTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR CCA 90 bp | TCTATAGTGTCAGGTCTGCTGGGTCTACTGAAATCTGACTTGTGTTTGGAGGACACCACACCTCTGATGTaGGAAATCAACCTTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SIVSGLLGLLKSDLCLEDTTPLM*EINLPH Trigger: ATGGGGAAGGTTGATTTCCCACATCAGAGGTGTGGT...GTCCTCCAAACACAAGTCAGATTTCAGTAGACCCAGCAGACCTGACACTATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGTCTGCTGGGTCTACTGAAATCTGACTTGTGTTTGGAGGACTTTCTGCATACCACACCTCTGATGTaGGAAATCAACCTTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGLLGLLKSDLCLEDFLHTTPLM*EINLPH Trigger: ATGGGGAAGGTTGATTTCCCACATCAGAGGTGTGGT...ATGCAGAAAGTCCTCCAAACACAAGTCAGATTTCAGTAGACCCAGCAGACCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR CCA 90 bp | ATAGTGTCAGGTCTGCTGGGTCTACTGAAATCTGACTTGTGTTTGGAGGACTTTTCCTGTGCTGTGAATTaGACACACAGCAGTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IVSGLLGLLKSDLCLEDFSCAVN*THSSGK Trigger: CTTCCCACTGCTGTGTGTCCAATTCACAGCACAGGA...AAAGTCCTCCAAACACAAGTCAGATTTCAGTAGACCCAGCAGACCTGACACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR CCA 90 bp | GTTGAGAACTCTCTCAGTCAAGGTCATTTTCTTCTGCTTCAATCGGATGATGTCGCAGGCTGGATGTACTaGGAAGTGATTTCCGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: VENSLSQGHFLLLQSDDVAGWMY*EVISDS Trigger: GCTGTCGGAAATCACTTCCCAGTACATCCAGCCTGC...GACATCATCCGATTGAAGCAGAAGAAAATGACCTTGACTGAGAGAGTTCTCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| 3UTR CAA 72 bp | TCAGGTCTGCTGGGTCTACTGAAATCTGACTTGTGTTaGGAGGACTTTCTGCATTCAAAACCCACCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SGLLGLLKSDLC*EDFLHSKPTSG Trigger: ACCTGAGGTGGGTTTTGAATGCAGAAAGTCCTCCAAACACAAGTCAGATTTCAGTAGACCCAGCAGACCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCTGTTGAGAACTCTCTCAGTCAAGGTCATTTTCTTCTGCTTCAATCGGATGCCTTCACACACATTTaGTGTGAGTCATGCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SAVENSLSQGHFLLLQSDAFTHI*CESCSA Trigger: GGCAGAGCATGACTCACACCAAATGTGTGTGAAGGC...ATCCGATTGAAGCAGAAGAAAATGACCTTGACTGAGAGAGTTCTCAACAGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| 3UTR CAA 72 bp | TCTCTGCACAGAATGAAAGACGAGAGCCTTCAGCTGTaGAGAACTCTCTCAGTCAAGGTCATTTTCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLHRMKDESLQL*RTLSVKVIFFC Trigger: GCAGAAGAAAATGACCTTGACTGAGAGAGTTCTCAACAGCTGAAGGCTCTCGTCTTTCATTCTGTGCAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| 3UTR CAA 72 bp | ATAGTGTCAGGTCTGCTGGGTCTACTGAAATCTGACTaGTGTTTGGAGGACTTTCTGCATTCAAAACCCACC | + |
|
Preference number: 4 (lower is better) Translates to: IVSGLLGLLKSD*CLEDFLHSKPT Trigger: GGTGGGTTTTGAATGCAGAAAGTCCTCCAAACACAAGTCAGATTTCAGTAGACCCAGCAGACCTGACACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGTCTACTGAAATCTGACTTGTGTTTGGAGGACTTTCTGCATTCAAAACCCAGTCTCTGGAGCTTCTaGCAGAAATTCATGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGLLKSDLCLEDFLHSKPSLWSF*QKFMSA Trigger: TGCTGACATGAATTTCTGTCAGAAGCTCCAGAGACT...GGGTTTTGAATGCAGAAAGTCCTCCAAACACAAGTCAGATTTCAGTAGACCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032661.14 |
||
| CDS-3UTR TCA 90 bp | AAGCCTTTCACAGGTCCAAGTATCTATAGTGTCAGGTCTGCTGGGTCTACTGAACTCAACTCAGATTTCTaGAGGAAGGATTTCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: KPFTGPSIYSVRSAGSTELNSDF*RKDFPH Trigger: ATGTGGGAAATCCTTCCTTCAGAAATCTGAGTTGAG...TTCAGTAGACCCAGCAGACCTGACACTATAGATACTTGGACCTGTGAAAGGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR TCA 90 bp | AGCCTTTCACAGGTCCAAGTATCTATAGTGTCAGGTCTGCTGGGTCTACTGAAACTGTCTGTTCCTGGATaGAAACTCAACTCAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSQVQVSIVSGLLGLLKLSVPG*KLNSDF Trigger: GAAATCTGAGTTGAGTTTTCATCCAGGAACAGACAG...TTTCAGTAGACCCAGCAGACCTGACACTATAGATACTTGGACCTGTGAAAGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR CCA 90 bp | CTGACTTGTGTTTGGAGGACTTTCTGCATTCAAAACCCACCTCAGGTTTCTCTGTCCTCTGTCTGTTCCTaGATGAAAACTCAACTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTCVWRTFCIQNPPQVSLSSVCS*MKTQLR Trigger: TCTGAGTTGAGTTTTCATCCAGGAACAGACAGAGGA...CAGAGAAACCTGAGGTGGGTTTTGAATGCAGAAAGTCCTCCAAACACAAGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR CCA 90 bp | GAGAACTCTCTCAGTCAAGGTCATTTTCTTCTGCTTCAATCGGATGATGTCCCTCTATGCACTTTAAGGTaGGACTTTCTCCTGAACGAC | + |
|
Preference number: 4 (lower is better) Translates to: ENSLSQGHFLLLQSDDVPLCTLR*DFLLND Trigger: GTCGTTCAGGAGAAAGTCCCACCTTAAAGTGCATAG...AGGGACATCATCCGATTGAAGCAGAAGAAAATGACCTTGACTGAGAGAGTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR CCA 90 bp | AGCCTTTCACAGGTCCAAGTATCTATAGTGTCAGGTCTGCTGGGTCTACTGAAAGTGATTAGTGTTTTCTaGCTGAAGAAAGCACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLSQVQVSIVSGLLGLLKVISVF*LKKAPE Trigger: TTCTGGTGCTTTCTTCAGCCAGAAAACACTAATCAC...TTTCAGTAGACCCAGCAGACCTGACACTATAGATACTTGGACCTGTGAAAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR CCA 90 bp | TCAGCTGTTGAGAACTCTCTCAGTCAAGGTCATTTTCTTCTGCTTCAATCGGATCTATGCACTTTAAGGTaGGACTTTCTCCTGAACGAC | + |
|
Preference number: 4 (lower is better) Translates to: SAVENSLSQGHFLLLQSDLCTLR*DFLLND Trigger: GTCGTTCAGGAGAAAGTCCCACCTTAAAGTGCATAG...ATCCGATTGAAGCAGAAGAAAATGACCTTGACTGAGAGAGTTCTCAACAGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGTCTACTGAAATCTGACTTGTGTTTGGAGGACTTTCTGCATTCAAAACCCGATAATGGAACAATATaGGCCACCTGTAGTGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: LGLLKSDLCLEDFLHSKPDNGTI*ATCSDY Trigger: GTAATCACTACAGGTGGCTCATATTGTTCCATTATC...GGGTTTTGAATGCAGAAAGTCCTCCAAACACAAGTCAGATTTCAGTAGACCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR TCA 90 bp | GTTGAGAACTCTCTCAGTCAAGGTCATTTTCTTCTGCTTCAATCGGATGATGTCCTCAACTCAGATTTCTaGAGGAAGGATTTCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VENSLSQGHFLLLQSDDVLNSDF*RKDFPH Trigger: ATGTGGGAAATCCTTCCTTCAGAAATCTGAGTTGAG...GACATCATCCGATTGAAGCAGAAGAAAATGACCTTGACTGAGAGAGTTCTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR CCA 90 bp | GTTGAGAACTCTCTCAGTCAAGGTCATTTTCTTCTGCTTCAATCGGATGATGTCTCCTCTGTCTGTTCCTaGATGAAAACTCAACTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VENSLSQGHFLLLQSDDVSSVCS*MKTQLR Trigger: TCTGAGTTGAGTTTTCATCCAGGAACAGACAGAGGA...GACATCATCCGATTGAAGCAGAAGAAAATGACCTTGACTGAGAGAGTTCTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR CCA 90 bp | GTTGAGAACTCTCTCAGTCAAGGTCATTTTCTTCTGCTTCAATCGGATGATGTCGTGATTAGTGTTTTCTaGCTGAAGAAAGCACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VENSLSQGHFLLLQSDDVVISVF*LKKAPE Trigger: TTCTGGTGCTTTCTTCAGCCAGAAAACACTAATCAC...GACATCATCCGATTGAAGCAGAAGAAAATGACCTTGACTGAGAGAGTTCTCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCAGCTGTTGAGAACTCTCTCAGTCAAGGTCATTTTCTTCTGCTTCAATCGAGACCTTCTCGTATTTaGTATATTCAACTGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PSAVENSLSQGHFLLLQSRPSRI*YIQLAC Trigger: ACAAGCCAGTTGAATATACCAAATACGAGAAGGTCT...CGATTGAAGCAGAAGAAAATGACCTTGACTGAGAGAGTTCTCAACAGCTGAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR CCA 90 bp | GTGTTTGGAGGACTTTCTGCATTCAAAACCCACCTCAGGTTTCTCTGCACAGAAGATTTCCCACATATGTaGCAAATAAAATGTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VFGGLSAFKTHLRFLCTEDFPHM*QIKCVS Trigger: AGAGACACATTTTATTTGCCACATATGTGGGAAATC...TTCTGTGCAGAGAAACCTGAGGTGGGTTTTGAATGCAGAAAGTCCTCCAAACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR TCA 90 bp | ATTTTCTTCTGCTTCAATCGGATGATGTCCCTTCAGCTGATACGTATGAGCAAAGATAATGGAACAATATaGGCCACCTGTAGTGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: IFFCFNRMMSLQLIRMSKDNGTI*ATCSDY Trigger: GTAATCACTACAGGTGGCTCATATTGTTCCATTATC...TTTGCTCATACGTATCAGCTGAAGGGACATCATCCGATTGAAGCAGAAGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTGAGAACTCTCTCAGTCAAGGTCATTTTCTTCTGCTTCAATCGGATGATGAGACCTTCTCGTATTTaGTATATTCAACTGGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLRTLSVKVIFFCFNRMMRPSRI*YIQLAC Trigger: ACAAGCCAGTTGAATATACCAAATACGAGAAGGTCT...CATCATCCGATTGAAGCAGAAGAAAATGACCTTGACTGAGAGAGTTCTCAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR CCA 90 bp | GTTGAGAACTCTCTCAGTCAAGGTCATTTTCTTCTGCTTCAATCGGATGATGTCGATTTCCCACATATGTaGCAAATAAAATGTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VENSLSQGHFLLLQSDDVDFPHM*QIKCVS Trigger: AGAGACACATTTTATTTGCCACATATGTGGGAAATC...GACATCATCCGATTGAAGCAGAAGAAAATGACCTTGACTGAGAGAGTTCTCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS TCA 90 bp | CTCCTGTGCTGTGAATTGGACACACAGCAGTGGGAAGGCCTTGTGTaGAGGACTGACAAGAGTCAACAATGCCGTCAGGCTGCTCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLCCELDTQQWEGLV*RTDKSQQCRQAALW Trigger: CCACAGAGCAGCCTGACGGCATTGTTGACTCTTGTCAGTCCTTCACACAAGGCCTTCCCACTGCTGTGTGTCCAATTCACAGCACAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
||
| CDS TCA 90 bp | TGTGTGAGTTCCATGCCGTGCCTGCAGGCTGGATGTACTGGGAAGTaGTTTCCGACAGCCAGGACATCCATGATGTGTCTCTCCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CVSSMPCLQAGCTGK*FPTARTSMMCLSSV Trigger: GACAGAGGAGAGACACATCATGGATGTCCTGGCTGTCGGAAATCACTTCCCAGTACATCCAGCCTGCAGGCACGGCATGGAACTCACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
||
| CDS GCA 90 bp | TTCTGGCTGAAGAAAGCACCAGAACTCGAGGGTGGGATGTGGTTTTaGGGATCTGAAGTTTTAGGGTCACCACCCTGCCACGGTTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: FWLKKAPELEGGMWF*GSEVLGSPPCHGSS Trigger: CGAGGAACCGTGGCAGGGTGGTGACCCTAAAACTTCAGATCCGCAAAACCACATCCCACCCTCGAGTTCTGGTGCTTTCTTCAGCCAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
||
| CDS CCA 90 bp | TCTCCTTTGTGTGAGTTCCATGCCGTGCCTGCAGGCTGGATGTACTaGGAAGTGATTTCCGACAGCCAGGACATCCATGATGTGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPLCEFHAVPAGWMY*EVISDSQDIHDVSL Trigger: GAGAGACACATCATGGATGTCCTGGCTGTCGGAAATCACTTCCCAGTACATCCAGCCTGCAGGCACGGCATGGAACTCACACAAAGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
||
| CDS TCA 90 bp | GAAGAAAGCACCAGAACTCGAGGGTGGGATGTGGTTTTGCGGATCTaGAGTTTTAGGGTCACCACCCTGCCACGGTTCCTCGATAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: EESTRTRGWDVVLRI*SFRVTTLPRFLDNG Trigger: TCCATTATCGAGGAACCGTGGCAGGGTGGTGACCCTAAAACTTCAGATCCGCAAAACCACATCCCACCCTCGAGTTCTGGTGCTTTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
||
| CDS GCA 90 bp | AAGAGTTCCATGCTGCATAAATGGTTGCTGAGGGCTGGGAACACTTaGACATTGGTCCCCTCTGCGTGCTTCCTCTCCTGTGCTGTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: KSSMLHKWLLRAGNT*TLVPSACFLSCAVN Trigger: ATTCACAGCACAGGAGAGGAAGCACGCAGAGGGGACCAATGTGCAAGTGTTCCCAGCCCTCAGCAACCATTTATGCAGCATGGAACTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
||
| CDS GCA 90 bp | GGTGGGATGTGGTTTTGCGGATCTGAAGTTTTAGGGTCACCACCCTaGCACGGTTCCTCGATAATGGAACAATATGAGCCACCTGTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GGMWFCGSEVLGSPP*HGSSIMEQYEPPVV Trigger: CACTACAGGTGGCTCATATTGTTCCATTATCGAGGAACCGTGGCAGGGTGGTGACCCTAAAACTTCAGATCCGCAAAACCACATCCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
||
| CDS CCA 90 bp | TCACACGGGCAACATCTCAGAGATCTCTTTTGTGTAGAAATGACGTaGGCGCCTAAAGGAATGGATCCCCCAGCTGCTTCACGTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SHGQHLRDLFCVEMT*APKGMDPPAASRPS Trigger: AGATGGACGTGAAGCAGCTGGGGGATCCATTCCTTTAGGCGCCCACGTCATTTCTACACAAAAGAGATCTCTGAGATGTTGCCCGTGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
||
| CDS CCA 90 bp | ATATTCAACTGGCTTGTCCTGAGAAAGAGTTCCATGCTGCATAAATaGTTGCTGAGGGCTGGGAACACTTGCACATTGGTCCCCTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: IFNWLVLRKSSMLHK*LLRAGNTCTLVPSA Trigger: CGCAGAGGGGACCAATGTGCAAGTGTTCCCAGCCCTCAGCAACCATTTATGCAGCATGGAACTCTTTCTCAGGACAAGCCAGTTGAATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
||
| CDS-3UTR CAA 90 bp | GAGGACTTTCTGCATTCAAAACCCACCTCAGGTTTCTCTGCACAGAATGAAAGAATGCTCTGCCTCCCCTaGACCACACCTCTGATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: EDFLHSKPTSGFSAQNERMLCLP*TTPLMW Trigger: CCACATCAGAGGTGTGGTCAAGGGGAGGCAGAGCAT...TCTTTCATTCTGTGCAGAGAAACCTGAGGTGGGTTTTGAATGCAGAAAGTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR CAA 90 bp | AGCCTTTCACAGGTCCAAGTATCTATAGTGTCAGGTCTGCTGGGTCTACTGAAAAGCAGTGGGAAGGCCTaGTGTGAAGGACTGACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLSQVQVSIVSGLLGLLKSSGKA*CEGLTR Trigger: TCTTGTCAGTCCTTCACACAAGGCCTTCCCACTGCT...TTTCAGTAGACCCAGCAGACCTGACACTATAGATACTTGGACCTGTGAAAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR CAA 90 bp | CAATCGGATGATGTCCCTTCAGCTGATACGTATGAGCAAACAACTGCACACAACCTCCTGTGCTGTGAATaGGACACACAGCAGTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QSDDVPSADTYEQTTAHNLLCCE*DTQQWE Trigger: TTCCCACTGCTGTGTGTCCAATTCACAGCACAGGAG...GTTGTGTGCAGTTGTTTGCTCATACGTATCAGCTGAAGGGACATCATCCGATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTCACAGGTCCAAGTATCTATAGTGTCAGGTCTGCTGGGTCTACTGAAATCGATGACAACTGTGACTaGTGCAGGAAGCCCTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PFTGPSIYSVRSAGSTEIDDNCD*CRKPFP Trigger: TGGGAAGGGCTTCCTGCACAAGTCACAGTTGTCATC...GATTTCAGTAGACCCAGCAGACCTGACACTATAGATACTTGGACCTGTGAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR CAA 90 bp | CCTTCAGCTGTTGAGAACTCTCTCAGTCAAGGTCATTTTCTTCTGCTTCAATCGCTCCTGTGCTGTGAATaGGACACACAGCAGTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PSAVENSLSQGHFLLLQSLLCCE*DTQQWE Trigger: TTCCCACTGCTGTGTGTCCAATTCACAGCACAGGAG...CGATTGAAGCAGAAGAAAATGACCTTGACTGAGAGAGTTCTCAACAGCTGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR CAA 90 bp | CTGACTTGTGTTTGGAGGACTTTCTGCATTCAAAACCCACCTCAGGTTTCTCTGATGCTGCATAAATGGTaGCTGAGGGCTGGGAACACT | + |
|
Preference number: 5 (lower is better) Translates to: LTCVWRTFCIQNPPQVSLMLHKW*LRAGNT Trigger: AGTGTTCCCAGCCCTCAGCAACCATTTATGCAGCAT...CAGAGAAACCTGAGGTGGGTTTTGAATGCAGAAAGTCCTCCAAACACAAGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
||
| CDS-3UTR CAA 90 bp | CAAGGTCATTTTCTTCTGCTTCAATCGGATGATGTCCCTTCAGCTGATACGTATAGCAGTGGGAAGGCCTaGTGTGAAGGACTGACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QGHFLLLQSDDVPSADTYSSGKA*CEGLTR Trigger: TCTTGTCAGTCCTTCACACAAGGCCTTCCCACTGCT...ATACGTATCAGCTGAAGGGACATCATCCGATTGAAGCAGAAGAAAATGACCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR CAA 90 bp | AGAACTCTCTCAGTCAAGGTCATTTTCTTCTGCTTCAATCGGATGATGTCCCTTGATGACAACTGTGACTaGTGCAGGAAGCCCTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: RTLSVKVIFFCFNRMMSLDDNCD*CRKPFP Trigger: TGGGAAGGGCTTCCTGCACAAGTCACAGTTGTCATC...AAGGGACATCATCCGATTGAAGCAGAAGAAAATGACCTTGACTGAGAGAGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS-3UTR CAA 90 bp | AATCTGACTTGTGTTTGGAGGACTTTCTGCATTCAAAACCCACCTCAGGTTTCTATGCTGCATAAATGGTaGCTGAGGGCTGGGAACACT | + |
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Preference number: 5 (lower is better) Translates to: NLTCVWRTFCIQNPPQVSMLHKW*LRAGNT Trigger: AGTGTTCCCAGCCCTCAGCAACCATTTATGCAGCAT...AGAAACCTGAGGTGGGTTTTGAATGCAGAAAGTCCTCCAAACACAAGTCAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032661.14 ENSMUST00000120935.2 |
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| CDS TCA 72 bp | CATTGGTCCCCTCTGCGTGCTTCCTCTCCTGTGCTGTaGATTGGACACACAGCAGTGGGAAGGCCTTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: HWSPLRASSPVL*IGHTAVGRPCV Trigger: CACACAAGGCCTTCCCACTGCTGTGTGTCCAATTCACAGCACAGGAGAGGAAGCACGCAGAGGGGACCAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
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| CDS GCA 72 bp | AGGGCTGGGAACACTTGCACATTGGTCCCCTCTGCGTaGTTCCTCTCCTGTGCTGTGAATTGGACACACAGC | + |
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Preference number: 6 (lower is better) Translates to: RAGNTCTLVPSA*FLSCAVNWTHS Trigger: GCTGTGTGTCCAATTCACAGCACAGGAGAGGAAGCACGCAGAGGGGACCAATGTGCAAGTGTTCCCAGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
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| CDS TCA 72 bp | TCCATGCCGTGCCTGCAGGCTGGATGTACTGGGAAGTaGTTTCCGACAGCCAGGACATCCATGATGTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: SMPCLQAGCTGK*FPTARTSMMCL Trigger: GAGACACATCATGGATGTCCTGGCTGTCGGAAATCACTTCCCAGTACATCCAGCCTGCAGGCACGGCATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
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| CDS GCA 72 bp | TTGCACATTGGTCCCCTCTGCGTGCTTCCTCTCCTGTaGTGTGAATTGGACACACAGCAGTGGGAAGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: LHIGPLCVLPLL*CELDTQQWEGL Trigger: AAGGCCTTCCCACTGCTGTGTGTCCAATTCACAGCACAGGAGAGGAAGCACGCAGAGGGGACCAATGTGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
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| CDS CCA 72 bp | TCTCCTTTGTGTGAGTTCCATGCCGTGCCTGCAGGCTaGATGTACTGGGAAGTGATTTCCGACAGCCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: SPLCEFHAVPAG*MYWEVISDSQD Trigger: GTCCTGGCTGTCGGAAATCACTTCCCAGTACATCCAGCCTGCAGGCACGGCATGGAACTCACACAAAGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
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| CDS CAA 72 bp | CATAAATGGTTGCTGAGGGCTGGGAACACTTGCACATaGGTCCCCTCTGCGTGCTTCCTCTCCTGTGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: HKWLLRAGNTCT*VPSACFLSCAV Trigger: CACAGCACAGGAGAGGAAGCACGCAGAGGGGACCAATGTGCAAGTGTTCCCAGCCCTCAGCAACCATTTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
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| CDS GCA 72 bp | ATGCTGCATAAATGGTTGCTGAGGGCTGGGAACACTTaGACATTGGTCCCCTCTGCGTGCTTCCTCTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: MLHKWLLRAGNT*TLVPSACFLSC Trigger: ACAGGAGAGGAAGCACGCAGAGGGGACCAATGTGCAAGTGTTCCCAGCCCTCAGCAACCATTTATGCAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
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| CDS CCA 72 bp | TGTGAGTTCCATGCCGTGCCTGCAGGCTGGATGTACTaGGAAGTGATTTCCGACAGCCAGGACATCCATGAT | + |
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Preference number: 6 (lower is better) Translates to: CEFHAVPAGWMY*EVISDSQDIHD Trigger: ATCATGGATGTCCTGGCTGTCGGAAATCACTTCCCAGTACATCCAGCCTGCAGGCACGGCATGGAACTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
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| CDS CAA 90 bp | TTCCTCTCCTGTGCTGTGAATTGGACACACAGCAGTGGGAAGGCCTaGTGTGAAGGACTGACAAGAGTCAACAATGCCGTCAGGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: FLSCAVNWTHSSGKA*CEGLTRVNNAVRLL Trigger: GAGCAGCCTGACGGCATTGTTGACTCTTGTCAGTCCTTCACACAAGGCCTTCCCACTGCTGTGTGTCCAATTCACAGCACAGGAGAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
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| CDS CAA 90 bp | TCCATGCTGCATAAATGGTTGCTGAGGGCTGGGAACACTTGCACATaGGTCCCCTCTGCGTGCTTCCTCTCCTGTGCTGTGAATTGGACA | + |
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Preference number: 6 (lower is better) Translates to: SMLHKWLLRAGNTCT*VPSACFLSCAVNWT Trigger: TGTCCAATTCACAGCACAGGAGAGGAAGCACGCAGAGGGGACCAATGTGCAAGTGTTCCCAGCCCTCAGCAACCATTTATGCAGCATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
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| CDS GCA 72 bp | AAGAAAGCACCAGAACTCGAGGGTGGGATGTGGTTTTaGGGATCTGAAGTTTTAGGGTCACCACCCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: KKAPELEGGMWF*GSEVLGSPPCH Trigger: GTGGCAGGGTGGTGACCCTAAAACTTCAGATCCGCAAAACCACATCCCACCCTCGAGTTCTGGTGCTTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
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| CDS GCA 72 bp | AAGAGTCAACAATGCCGTCAGGCTGCTCTGTGGCACTaGTTTGATGGTCTCTGTCTGCTTGAAGGTGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: KSQQCRQAALWH*FDGLCLLEGEA Trigger: AGCCTCACCTTCAAGCAGACAGAGACCATCAAAGCAGTGCCACAGAGCAGCCTGACGGCATTGTTGACTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
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| CDS CCA 72 bp | TGGCTGAAGAAAGCACCAGAACTCGAGGGTGGGATGTaGTTTTGCGGATCTGAAGTTTTAGGGTCACCACCC | + |
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Preference number: 6 (lower is better) Translates to: WLKKAPELEGGM*FCGSEVLGSPP Trigger: GGGTGGTGACCCTAAAACTTCAGATCCGCAAAACCACATCCCACCCTCGAGTTCTGGTGCTTTCTTCAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
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| CDS CAA 90 bp | TTCAACTGGCTTGTCCTGAGAAAGAGTTCCATGCTGCATAAATGGTaGCTGAGGGCTGGGAACACTTGCACATTGGTCCCCTCTGCGTGC | + |
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Preference number: 6 (lower is better) Translates to: FNWLVLRKSSMLHKW*LRAGNTCTLVPSAC Trigger: GCACGCAGAGGGGACCAATGTGCAAGTGTTCCCAGCCCTCAGCAACCATTTATGCAGCATGGAACTCTTTCTCAGGACAAGCCAGTTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
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| CDS TCA 72 bp | TGTGAATTGGACACACAGCAGTGGGAAGGCCTTGTGTaGAGGACTGACAAGAGTCAACAATGCCGTCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: CELDTQQWEGLV*RTDKSQQCRQA Trigger: AGCCTGACGGCATTGTTGACTCTTGTCAGTCCTTCACACAAGGCCTTCCCACTGCTGTGTGTCCAATTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
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| CDS CAA 72 bp | TGTGCTGTGAATTGGACACACAGCAGTGGGAAGGCCTaGTGTGAAGGACTGACAAGAGTCAACAATGCCGTC | + |
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Preference number: 6 (lower is better) Translates to: CAVNWTHSSGKA*CEGLTRVNNAV Trigger: GACGGCATTGTTGACTCTTGTCAGTCCTTCACACAAGGCCTTCCCACTGCTGTGTGTCCAATTCACAGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
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| CDS CAA 72 bp | CTTGTCCTGAGAAAGAGTTCCATGCTGCATAAATGGTaGCTGAGGGCTGGGAACACTTGCACATTGGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: LVLRKSSMLHKW*LRAGNTCTLVP Trigger: GGGGACCAATGTGCAAGTGTTCCCAGCCCTCAGCAACCATTTATGCAGCATGGAACTCTTTCTCAGGACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
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| CDS TCA 72 bp | ATCATTTGGAAATGCAGCCTTCACACACATTTGGTGTaGGTCATGCTCTGCCTCCCCTTGACCACACCTCTG | + |
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Preference number: 6 (lower is better) Translates to: IIWKCSLHTHLV*VMLCLPLTTPL Trigger: CAGAGGTGTGGTCAAGGGGAGGCAGAGCATGACTCACACCAAATGTGTGTGAAGGCTGCATTTCCAAATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
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| CDS CCA 72 bp | TGGCTTGTCCTGAGAAAGAGTTCCATGCTGCATAAATaGTTGCTGAGGGCTGGGAACACTTGCACATTGGTC | + |
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Preference number: 6 (lower is better) Translates to: WLVLRKSSMLHK*LLRAGNTCTLV Trigger: GACCAATGTGCAAGTGTTCCCAGCCCTCAGCAACCATTTATGCAGCATGGAACTCTTTCTCAGGACAAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
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| CDS GCA 72 bp | TGGTTTTGCGGATCTGAAGTTTTAGGGTCACCACCCTaGCACGGTTCCTCGATAATGGAACAATATGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: WFCGSEVLGSPP*HGSSIMEQYEP Trigger: TGGCTCATATTGTTCCATTATCGAGGAACCGTGGCAGGGTGGTGACCCTAAAACTTCAGATCCGCAAAACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
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| CDS CCA 72 bp | CAACATCTCAGAGATCTCTTTTGTGTAGAAATGACGTaGGCGCCTAAAGGAATGGATCCCCCAGCTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: QHLRDLFCVEMT*APKGMDPPAAS Trigger: TGAAGCAGCTGGGGGATCCATTCCTTTAGGCGCCCACGTCATTTCTACACAAAAGAGATCTCTGAGATGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
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| CDS TCA 72 bp | CTCCCCTGTGTGAAACCGACTGTGTTTCTTCAGATCTaGTGCATAGACAAACAATTTCCCGCAGTGGTTACA | + |
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Preference number: 6 (lower is better) Translates to: LPCVKPTVFLQI*CIDKQFPAVVT Trigger: TGTAACCACTGCGGGAAATTGTTTGTCTATGCATCAGATCTGAAGAAACACAGTCGGTTTCACACAGGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032661.14 ENSMUST00000116324.3 ENSMUST00000120935.2 |
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