Pregenerated sensors for ZFP811 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055202Ensembl transcript IDs: ENSMUST00000080905.7, ENSMUST00000200914.5, ENSMUST00000234594.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAAGGCTGCTCACAGCCATCTGTAACTCCAGGCACTCTTCAGGGTaGGGCAGGCAGTGCACATATGTGACACACATTCACACATGCAGG | + |
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Preference number: 1 (lower is better) Translates to: TRLLTAICNSRHSSG*GRQCTYVTHIHTCR Trigger: CCTGCATGTGTGAATGTGTGTCACATATGTGCACTGCCTGCCCCACCCTGAAGAGTGCCTGGAGTTACAGATGGCTGTGAGCAGCCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR GCA 90 bp | TGTGTTTACAAAGGGCGTTTGTTCAGATCCCAGCACCTACAAGGCTaGTCACAGCCATCTGTAACTCCAGGCACTCTTCAGGGTGGGGCA | + |
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Preference number: 1 (lower is better) Translates to: CVYKGRLFRSQHLQG*SQPSVTPGTLQGGA Trigger: TGCCCCACCCTGAAGAGTGCCTGGAGTTACAGATGGCTGTGAGCAGCCTTGTAGGTGCTGGGATCTGAACAAACGCCCTTTGTAAACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR CCA 90 bp | CAGAAGAGGACACTGGGTCTCTTAGAACTGGAGTTGGGACAGTTGTaGCTTTCCATGTGGGTGTTGGGAATCAAACCTGGATCCTCTCTA | + |
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Preference number: 1 (lower is better) Translates to: QKRTLGLLELELGQL*LSMWVLGIKPGSSL Trigger: TAGAGAGGATCCAGGTTTGATTCCCAACACCCACATGGAAAGCCACAACTGTCCCAACTCCAGTTCTAAGAGACCCAGTGTCCTCTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR GCA 90 bp | AAGTCTCAAGTCTTCATCAGGCTGTTTAGTTTTATCAGATTTCTCTaGAGGCTCAGCACTTTGATGCTTCTGAAGAGACGGGGAAGCGCT | + |
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Preference number: 1 (lower is better) Translates to: KSQVFIRLFSFIRFL*RLSTLMLLKRRGSA Trigger: AGCGCTTCCCCGTCTCTTCAGAAGCATCAAAGTGCTGAGCCTGCAGAGAAATCTGATAAAACTAAACAGCCTGATGAAGACTTGAGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234594.2 |
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| 3UTR GCA 90 bp | AAATTCATGGTTCACAGTGCCCTCTGTAGAGAATTTGAAGATCTCTaGACACTCATGACCTTCTTTACAGTCATGGAGTTTCTCCACAAG | + |
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Preference number: 1 (lower is better) Translates to: KFMVHSALCREFEDL*TLMTFFTVMEFLHK Trigger: CTTGTGGAGAAACTCCATGACTGTAAAGAAGGTCATGAGTGTGCAGAGATCTTCAAATTCTCTACAGAGGGCACTGTGAACCATGAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234594.2 |
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| 3UTR GCA 90 bp | TTAGTATACACATTCTTTCCATGTTCCTGGACTTCATTTGACTTCTaGCCTGGCCTAGGTTTCAGTCGCACATTTATAGCTAAATGGCCA | + |
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Preference number: 1 (lower is better) Translates to: LVYTFFPCSWTSFDF*PGLGFSRTFIAKWP Trigger: TGGCCATTTAGCTATAAATGTGCGACTGAAACCTAGGCCAGGGCAGAAGTCAAATGAAGTCCAGGAACATGGAAAGAATGTGTATACTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234594.2 |
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| 3UTR TCA 90 bp | TGCACCAGGTTCCTCTACAATCTAATCAATGCCATGCCTTTCCCATaGTTTGGGACCACAAAAAGTTTAAGCATCACTTGTACTCATACA | + |
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Preference number: 1 (lower is better) Translates to: CTRFLYNLINAMPFP*FGTTKSLSITCTHT Trigger: TGTATGAGTACAAGTGATGCTTAAACTTTTTGTGGTCCCAAATCATGGGAAAGGCATGGCATTGATTAGATTGTAGAGGAACCTGGTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR CCA 90 bp | CAGGTTCCTCTACAATCTAATCAATGCCATGCCTTTCCCATGATTTaGGACCACAAAAAGTTTAAGCATCACTTGTACTCATACAGCTTT | + |
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Preference number: 1 (lower is better) Translates to: QVPLQSNQCHAFPMI*DHKKFKHHLYSYSF Trigger: AAAGCTGTATGAGTACAAGTGATGCTTAAACTTTTTGTGGTCCCAAATCATGGGAAAGGCATGGCATTGATTAGATTGTAGAGGAACCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR-3UTR TCA 90 bp | ACTGGAGTTGGGACAGTTGTGGCTTTCCATGTGGGTGTTGGGAATCAAACCTGGAGTGCTCTTAACCACTaGGGCATCTCTCCAGCACCC | + |
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Preference number: 2 (lower is better) Translates to: TGVGTVVAFHVGVGNQTWSALNH*GISPAP Trigger: GGGTGCTGGAGAGATGCCTCAGTGGTTAAGAGCACT...CCAGGTTTGATTCCCAACACCCACATGGAAAGCCACAACTGTCCCAACTCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTGGAGAGATGGCTCAGTTTTTAAGAGCACTCCCTGTGTTTACAAAGGGCGAGTTGGGACAGTTGTaGCTTTCCATGTGGGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: WAGEMAQFLRALPVFTKGELGQL*LSMWVL Trigger: CAACACCCACATGGAAAGCCACAACTGTCCCAACTC...GCCCTTTGTAAACACAGGGAGTGCTCTTAAAAACTGAGCCATCTCTCCAGCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR CAA 90 bp | GATGGCTCAGTTTTTAAGAGCACTCCCTGTGTTTACAAAGGGCGTTaGTTCAGATCCCAGCACCTACAAGGCTGCTCACAGCCATCTGTA | + |
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Preference number: 2 (lower is better) Translates to: DGSVFKSTPCVYKGR*FRSQHLQGCSQPSV Trigger: TACAGATGGCTGTGAGCAGCCTTGTAGGTGCTGGGATCTGAACAAACGCCCTTTGTAAACACAGGGAGTGCTCTTAAAAACTGAGCCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR-3UTR TCA 90 bp | GGTCTCTTAGAACTGGAGTTGGGACAGTTGTGGCTTTCCATGTGGGTGTTGGGACCAGCACCCTCTAGTTaGCTTCTTATACATATTTGG | + |
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Preference number: 2 (lower is better) Translates to: GLLELELGQLWLSMWVLGPAPSS*LLIHIW Trigger: CCAAATATGTATAAGAAGTCAACTAGAGGGTGCTGG...TCCCAACACCCACATGGAAAGCCACAACTGTCCCAACTCCAGTTCTAAGAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR-3UTR GCA 90 bp | ACTGGAGTTGGGACAGTTGTGGCTTTCCATGTGGGTGTTGGGAATCAAACCTGGAAAGGCTGTGAACACTaGTTACAAACAAGCCTATGG | + |
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Preference number: 2 (lower is better) Translates to: TGVGTVVAFHVGVGNQTWKGCEH*LQTSLW Trigger: CCATAGGCTTGTTTGTAAGCAGTGTTCACAGCCTTT...CCAGGTTTGATTCCCAACACCCACATGGAAAGCCACAACTGTCCCAACTCCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGCACTCCCTGTGTTTACAAAGGGCGTTTGTTCAGATCCCAGCACCTACAAGGAGGAAGCAGAGAAGTaGAGACTTTCTACATTGCAA | + |
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Preference number: 2 (lower is better) Translates to: RALPVFTKGVCSDPSTYKEEAEK*RLSTLQ Trigger: TTGCAATGTAGAAAGTCTTCACTTCTCTGCTTCCTC...CTTGTAGGTGCTGGGATCTGAACAAACGCCCTTTGTAAACACAGGGAGTGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR-3UTR GCA 90 bp | AGAGCACTCCCTGTGTTTACAAAGGGCGTTTGTTCAGATCCCAGCACCTACAAGAAGCCTATGGATTTATaGCACTGTGTATGGCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: RALPVFTKGVCSDPSTYKKPMDL*HCVWLS Trigger: GGAAAGCCATACACAGTGGCATAAATCCATAGGCTT...CTTGTAGGTGCTGGGATCTGAACAAACGCCCTTTGTAAACACAGGGAGTGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR-3UTR CCA 90 bp | TGGGCTGGAGAGATGGCTCAGTTTTTAAGAGCACTCCCTGTGTTTACAAAGGGCTTATGCCACTGTGTATaGCTTTCCCATATTGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: WAGEMAQFLRALPVFTKGLCHCV*LSHIAS Trigger: GGAAGCAATATGGGAAAGCCATACACAGTGGCATAA...GCCCTTTGTAAACACAGGGAGTGCTCTTAAAAACTGAGCCATCTCTCCAGCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR-3UTR CCA 90 bp | ACTGGAGTTGGGACAGTTGTGGCTTTCCATGTGGGTGTTGGGAATCAAACCTGGGCCTTTCCCATGATTTaGGACCACAAAAAGTTTAAG | + |
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Preference number: 2 (lower is better) Translates to: TGVGTVVAFHVGVGNQTWAFPMI*DHKKFK Trigger: CTTAAACTTTTTGTGGTCCCAAATCATGGGAAAGGC...CCAGGTTTGATTCCCAACACCCACATGGAAAGCCACAACTGTCCCAACTCCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR-3UTR TCA 90 bp | TGGGCTGGAGAGATGGCTCAGTTTTTAAGAGCACTCCCTGTGTTTACAAAGGGCTCCAGTGAGTTTATGTaGAAACACCACAGCTATTTA | + |
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Preference number: 2 (lower is better) Translates to: WAGEMAQFLRALPVFTKGSSEFM*KHHSYL Trigger: TAAATAGCTGTGGTGTTTTCACATAAACTCACTGGA...GCCCTTTGTAAACACAGGGAGTGCTCTTAAAAACTGAGCCATCTCTCCAGCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR-3UTR GCA 90 bp | TACTGGGCTGGAGAGATGGCTCAGTTTTTAAGAGCACTCCCTGTGTTTACAAAGGAAGACTTTCTACATTaGAAACATGCACCAGGTTCC | + |
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Preference number: 2 (lower is better) Translates to: YWAGEMAQFLRALPVFTKEDFLH*KHAPGS Trigger: GGAACCTGGTGCATGTTTGCAATGTAGAAAGTCTTC...CTTTGTAAACACAGGGAGTGCTCTTAAAAACTGAGCCATCTCTCCAGCCCAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR-3UTR GCA 90 bp | TTCAACAATGAATCTAACACAATTCACAATGCAAACAGAAACGTGCCAGATTTGGGATTCACCTGCCTCTaGCTCCCAAGTACTGGGACT | + |
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Preference number: 2 (lower is better) Translates to: FNNESNTIHNANRNVPDLGFTCL*LPSTGT Trigger: AGTCCCAGTACTTGGGAGGCAGAGGCAGGTGAATCC...CAAATCTGGCACGTTTCTGTTTGCATTGTGAATTGTGTTAGATTCATTGTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR-3UTR TCA 90 bp | ATGATTCTGACCAAGTCTCAAGTCTTCATCAGGCTGTTTAGTTTTATCAGATTTTTCCTGGACTTCATTTaGCTTCTGCCCTGGCCTAGG | + |
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Preference number: 2 (lower is better) Translates to: MILTKSQVFIRLFSFIRFFLDFI*LLPWPR Trigger: CCTAGGCCAGGGCAGAAGTCAAATGAAGTCCAGGAA...AAATCTGATAAAACTAAACAGCCTGATGAAGACTTGAGACTTGGTCAGAATCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234594.2 |
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| 3UTR-3UTR TCA 90 bp | AATGAATCTAACACAATTCACAATGCAAACAGAAACGTGCCAGATTTGATTCGAACGGTTTCTCTGTTTTaGGACAGGACAGCCTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: NESNTIHNANRNVPDLIRTVSLF*DRTASA Trigger: AGCTGAGGCTGTCCTGTCTCAAAACAGAGAAACCGT...TCGAATCAAATCTGGCACGTTTCTGTTTGCATTGTGAATTGTGTTAGATTCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR-3UTR TCA 90 bp | AATGAATCTAACACAATTCACAATGCAAACAGAAACGTGCCAGATTTGATTCGATTCCTTCACATGTGCTaGTTACTAGTCTCCATCCCA | + |
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Preference number: 2 (lower is better) Translates to: NESNTIHNANRNVPDLIRFLHMC*LLVSIP Trigger: TGGGATGGAGACTAGTAATCAGCACATGTGAAGGAA...TCGAATCAAATCTGGCACGTTTCTGTTTGCATTGTGAATTGTGTTAGATTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR-3UTR GCA 90 bp | TCCTTAGTATACACATTCTTTCCATGTTCCTGGACTTCATTTGACTTCTGCCCTGAATTTGAAGATCTCTaGACACTCATGACCTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: SLVYTFFPCSWTSFDFCPEFEDL*TLMTFF Trigger: AAAGAAGGTCATGAGTGTGCAGAGATCTTCAAATTC...AGGGCAGAAGTCAAATGAAGTCCAGGAACATGGAAAGAATGTGTATACTAAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234594.2 |
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| 3UTR-3UTR CCA 90 bp | AATGAATCTAACACAATTCACAATGCAAACAGAAACGTGCCAGATTTGATTCGATTTCCATGTGGGTGTTaGGAATCAAACCTGGATCCT | + |
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Preference number: 2 (lower is better) Translates to: NESNTIHNANRNVPDLIRFPCGC*ESNLDP Trigger: AGGATCCAGGTTTGATTCCCAACACCCACATGGAAA...TCGAATCAAATCTGGCACGTTTCTGTTTGCATTGTGAATTGTGTTAGATTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR-3UTR CCA 90 bp | AATGAATCTAACACAATTCACAATGCAAACAGAAACGTGCCAGATTTGATTCGAAATGAACTACTGGGCTaGAGAGATGGCTCAGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: NESNTIHNANRNVPDLIRNELLG*RDGSVF Trigger: AAAAACTGAGCCATCTCTCCAGCCCAGTAGTTCATT...TCGAATCAAATCTGGCACGTTTCTGTTTGCATTGTGAATTGTGTTAGATTCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR-3UTR GCA 90 bp | TTCAACAATGAATCTAACACAATTCACAATGCAAACAGAAACGTGCCAGATTTGTCTACATTGCAAACATaGACCAGGTTCCTCTACAAT | + |
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Preference number: 2 (lower is better) Translates to: FNNESNTIHNANRNVPDLSTLQT*TRFLYN Trigger: ATTGTAGAGGAACCTGGTGCATGTTTGCAATGTAGA...CAAATCTGGCACGTTTCTGTTTGCATTGTGAATTGTGTTAGATTCATTGTTGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR-3UTR CCA 90 bp | ATGATTCTGACCAAGTCTCAAGTCTTCATCAGGCTGTTTAGTTTTATCAGATTTTTCTTTCCATGTTCCTaGACTTCATTTGACTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: MILTKSQVFIRLFSFIRFFFPCS*TSFDFC Trigger: GCAGAAGTCAAATGAAGTCCAGGAACATGGAAAGAA...AAATCTGATAAAACTAAACAGCCTGATGAAGACTTGAGACTTGGTCAGAATCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000234594.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAACAATGAATCTAACACAATTCACAATGCAAACAGAAACGTGCCAGATTTGCTACAATCTAATCAATaGCATGCCTTTCCCATGATT | + |
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Preference number: 2 (lower is better) Translates to: FNNESNTIHNANRNVPDLLQSNQ*HAFPMI Trigger: AATCATGGGAAAGGCATGGCATTGATTAGATTGTAG...CAAATCTGGCACGTTTCTGTTTGCATTGTGAATTGTGTTAGATTCATTGTTGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR-3UTR GCA 90 bp | TTCAACAATGAATCTAACACAATTCACAATGCAAACAGAAACGTGCCAGATTTGTGTGTGTGGTTAATTTaGCTGCATATATGTCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: FNNESNTIHNANRNVPDLCVWLI*LHICLC Trigger: ACACAGACATATATGCAGGCAAATTAACCACACACA...CAAATCTGGCACGTTTCTGTTTGCATTGTGAATTGTGTTAGATTCATTGTTGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR-3UTR CCA 90 bp | TTCAACAATGAATCTAACACAATTCACAATGCAAACAGAAACGTGCCAGATTTGTTACAAACAAGCCTATaGATTTATGCCACTGTGTAT | + |
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Preference number: 2 (lower is better) Translates to: FNNESNTIHNANRNVPDLLQTSL*IYATVY Trigger: ATACACAGTGGCATAAATCCATAGGCTTGTTTGTAA...CAAATCTGGCACGTTTCTGTTTGCATTGTGAATTGTGTTAGATTCATTGTTGAA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR GCA 72 bp | AAAGGGCGTTTGTTCAGATCCCAGCACCTACAAGGCTaGTCACAGCCATCTGTAACTCCAGGCACTCTTCAG | + |
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Preference number: 3 (lower is better) Translates to: KGRLFRSQHLQG*SQPSVTPGTLQ Trigger: CTGAAGAGTGCCTGGAGTTACAGATGGCTGTGAGCAGCCTTGTAGGTGCTGGGATCTGAACAAACGCCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR-3UTR CAA 90 bp | GGTCTCTTAGAACTGGAGTTGGGACAGTTGTGGCTTTCCATGTGGGTGTTGGGACACGGTTTCTCTGTTTaGAGACAGGACAGCCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: GLLELELGQLWLSMWVLGHGFSV*RQDSLS Trigger: GCTGAGGCTGTCCTGTCTCAAAACAGAGAAACCGTG...TCCCAACACCCACATGGAAAGCCACAACTGTCCCAACTCCAGTTCTAAGAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR CCA 72 bp | ACACTGGGTCTCTTAGAACTGGAGTTGGGACAGTTGTaGCTTTCCATGTGGGTGTTGGGAATCAAACCTGGA | + |
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Preference number: 3 (lower is better) Translates to: TLGLLELELGQL*LSMWVLGIKPG Trigger: TCCAGGTTTGATTCCCAACACCCACATGGAAAGCCACAACTGTCCCAACTCCAGTTCTAAGAGACCCAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR CCA 72 bp | TTAGAACTGGAGTTGGGACAGTTGTGGCTTTCCATGTaGGTGTTGGGAATCAAACCTGGATCCTCTCTAAGA | + |
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Preference number: 3 (lower is better) Translates to: LELELGQLWLSM*VLGIKPGSSLR Trigger: TCTTAGAGAGGATCCAGGTTTGATTCCCAACACCCACATGGAAAGCCACAACTGTCCCAACTCCAGTTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR TCA 72 bp | AGTATACACATTCTTTCCATGTTCCTGGACTTCATTTaGCTTCTGCCCTGGCCTAGGTTTCAGTCGCACATT | + |
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Preference number: 3 (lower is better) Translates to: SIHILSMFLDFI*LLPWPRFQSHI Trigger: AATGTGCGACTGAAACCTAGGCCAGGGCAGAAGTCAAATGAAGTCCAGGAACATGGAAAGAATGTGTATACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234594.2 |
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| 3UTR GCA 72 bp | ACATTCTTTCCATGTTCCTGGACTTCATTTGACTTCTaGCCTGGCCTAGGTTTCAGTCGCACATTTATAGCT | + |
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Preference number: 3 (lower is better) Translates to: TFFPCSWTSFDF*PGLGFSRTFIA Trigger: AGCTATAAATGTGCGACTGAAACCTAGGCCAGGGCAGAAGTCAAATGAAGTCCAGGAACATGGAAAGAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234594.2 |
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| 3UTR TCA 72 bp | CCCTCTGTAGAGAATTTGAAGATCTCTGCACACTCATaGCCTTCTTTACAGTCATGGAGTTTCTCCACAAGT | + |
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Preference number: 3 (lower is better) Translates to: PSVENLKISAHS*PSLQSWSFSTS Trigger: ACTTGTGGAGAAACTCCATGACTGTAAAGAAGGTCATGAGTGTGCAGAGATCTTCAAATTCTCTACAGAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234594.2 |
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| 3UTR GCA 72 bp | GTTCACAGTGCCCTCTGTAGAGAATTTGAAGATCTCTaGACACTCATGACCTTCTTTACAGTCATGGAGTTT | + |
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Preference number: 3 (lower is better) Translates to: VHSALCREFEDL*TLMTFFTVMEF Trigger: AAACTCCATGACTGTAAAGAAGGTCATGAGTGTGCAGAGATCTTCAAATTCTCTACAGAGGGCACTGTGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234594.2 |
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| 3UTR CCA 72 bp | AATTTAGAAATAGGAGTCCAGAATGAACTACTGGGCTaGAGAGATGGCTCAGTTTTTAAGAGCACTCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: NLEIGVQNELLG*RDGSVFKSTPC Trigger: ACAGGGAGTGCTCTTAAAAACTGAGCCATCTCTCCAGCCCAGTAGTTCATTCTGGACTCCTATTTCTAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR GCA 72 bp | GTGAAAACACCACAGCTATTTAAAGGCTGTGAACACTaGTTACAAACAAGCCTATGGATTTATGCCACTGTG | + |
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Preference number: 3 (lower is better) Translates to: VKTPQLFKGCEH*LQTSLWIYATV Trigger: CACAGTGGCATAAATCCATAGGCTTGTTTGTAAGCAGTGTTCACAGCCTTTAAATAGCTGTGGTGTTTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR CCA 72 bp | TTTAAAGGCTGTGAACACTGCTTACAAACAAGCCTATaGATTTATGCCACTGTGTATGGCTTTCCCATATTG | + |
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Preference number: 3 (lower is better) Translates to: FKGCEHCLQTSL*IYATVYGFPIL Trigger: CAATATGGGAAAGCCATACACAGTGGCATAAATCCATAGGCTTGTTTGTAAGCAGTGTTCACAGCCTTTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR CCA 72 bp | CCTGGCCTAGGTTTCAGTCGCACATTTATAGCTAAATaGCCAATGAGTACATTGACAAACCCATTTCTTTTA | + |
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Preference number: 3 (lower is better) Translates to: PGLGFSRTFIAK*PMSTLTNPFLL Trigger: TAAAAGAAATGGGTTTGTCAATGTACTCATTGGCCATTTAGCTATAAATGTGCGACTGAAACCTAGGCCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234594.2 |
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| 3UTR TCA 72 bp | TTCCTCTACAATCTAATCAATGCCATGCCTTTCCCATaGTTTGGGACCACAAAAAGTTTAAGCATCACTTGT | + |
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Preference number: 3 (lower is better) Translates to: FLYNLINAMPFP*FGTTKSLSITC Trigger: ACAAGTGATGCTTAAACTTTTTGTGGTCCCAAATCATGGGAAAGGCATGGCATTGATTAGATTGTAGAGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR TCA 72 bp | TTGACTTCTTATACATATTTGGAGGAAGCAGAGAAGTaGAGACTTTCTACATTGCAAACATGCACCAGGTTC | + |
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Preference number: 3 (lower is better) Translates to: LTSYTYLEEAEK*RLSTLQTCTRF Trigger: GAACCTGGTGCATGTTTGCAATGTAGAAAGTCTTCACTTCTCTGCTTCCTCCAAATATGTATAAGAAGTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR CCA 72 bp | CTACAATCTAATCAATGCCATGCCTTTCCCATGATTTaGGACCACAAAAAGTTTAAGCATCACTTGTACTCA | + |
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Preference number: 3 (lower is better) Translates to: LQSNQCHAFPMI*DHKKFKHHLYS Trigger: TGAGTACAAGTGATGCTTAAACTTTTTGTGGTCCCAAATCATGGGAAAGGCATGGCATTGATTAGATTGTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR-3UTR CAA 90 bp | GTTGACTTCTTATACATATTTGGAGGAAGCAGAGAAGTGAAGACTTTCTACATTGGGAACTTTCACATATaGTTAGCAAAAAGTCCCCCT | + |
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Preference number: 3 (lower is better) Translates to: VDFLYIFGGSREVKTFYIGNFHI*LAKSPP Trigger: AGGGGGACTTTTTGCTAACAATATGTGAAAGTTCCC...AATGTAGAAAGTCTTCACTTCTCTGCTTCCTCCAAATATGTATAAGAAGTCAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR-3UTR CAA 90 bp | ATGATTCTGACCAAGTCTCAAGTCTTCATCAGGCTGTTTAGTTTTATCAGATTTTGGCCAATGAGTACATaGACAAACCCATTTCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: MILTKSQVFIRLFSFIRFWPMST*TNPFLL Trigger: TAAAAGAAATGGGTTTGTCAATGTACTCATTGGCCA...AAATCTGATAAAACTAAACAGCCTGATGAAGACTTGAGACTTGGTCAGAATCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000234594.2 |
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| CDS-3UTR TCA 90 bp | ACTGGAGTTGGGACAGTTGTGGCTTTCCATGTGGGTGTTGGGAATCAAACCTGGTTCCTGGACTTCATTTaGCTTCTGCCCTGGCCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGVGTVVAFHVGVGNQTWFLDFI*LLPWPR Trigger: CCTAGGCCAGGGCAGAAGTCAAATGAAGTCCAGGAA...CCAGGTTTGATTCCCAACACCCACATGGAAAGCCACAACTGTCCCAACTCCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR TCA 90 bp | TGGGCTGGAGAGATGGCTCAGTTTTTAAGAGCACTCCCTGTGTTTACAAAGGGCGCCTCTTCAAGGAGCTaGGAGAAGTACAAGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WAGEMAQFLRALPVFTKGASSRS*EKYKLS Trigger: GGAAAGCTTGTACTTCTCTCAGCTCCTTGAAGAGGC...GCCCTTTGTAAACACAGGGAGTGCTCTTAAAAACTGAGCCATCTCTCCAGCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR TCA 90 bp | TACTGGGCTGGAGAGATGGCTCAGTTTTTAAGAGCACTCCCTGTGTTTACAAAGGGGTACCAAGACGAGTaGAAGCCTTCCCGCATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YWAGEMAQFLRALPVFTKGYQDE*KPSRIA Trigger: AGCAATGCGGGAAGGCTTTCACTCGTCTTGGTACCC...CTTTGTAAACACAGGGAGTGCTCTTAAAAACTGAGCCATCTCTCCAGCCCAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR CAA 72 bp | CTGGAGTTGGGACAGTTGTGGCTTTCCATGTGGGTGTaGGGAATCAAACCTGGATCCTCTCTAAGAACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LELGQLWLSMWV*GIKPGSSLRTV Trigger: GACTGTTCTTAGAGAGGATCCAGGTTTGATTCCCAACACCCACATGGAAAGCCACAACTGTCCCAACTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| 3UTR CAA 72 bp | AGGACACTGGGTCTCTTAGAACTGGAGTTGGGACAGTaGTGGCTTTCCATGTGGGTGTTGGGAATCAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: RTLGLLELELGQ*WLSMWVLGIKP Trigger: AGGTTTGATTCCCAACACCCACATGGAAAGCCACAACTGTCCCAACTCCAGTTCTAAGAGACCCAGTGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR TCA 90 bp | ACTGGAGTTGGGACAGTTGTGGCTTTCCATGTGGGTGTTGGGAATCAAACCTGGACTGAGTCAAAGACATaGAGGCTTTTGCACACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TGVGTVVAFHVGVGNQTWTESKT*RLLHTA Trigger: AGCAGTGTGCAAAAGCCTTCATGTCTTTGACTCAGT...CCAGGTTTGATTCCCAACACCCACATGGAAAGCCACAACTGTCCCAACTCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR CCA 90 bp | AGAGCACTCCCTGTGTTTACAAAGGGCGTTTGTTCAGATCCCAGCACCTACAAGGGACTCGAGCCAGTGTaGATTCTTTCATGTCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: RALPVFTKGVCSDPSTYKGLEPV*ILSCLR Trigger: CCTAAGACATGAAAGAATCCACACTGGCTCGAGTCC...CTTGTAGGTGCTGGGATCTGAACAAACGCCCTTTGTAAACACAGGGAGTGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR CCA 90 bp | TACTGGGCTGGAGAGATGGCTCAGTTTTTAAGAGCACTCCCTGTGTTTACAAAGCACAGTTTACACTCATaGGGACTCGAGCCAGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YWAGEMAQFLRALPVFTKHSLHS*GLEPVW Trigger: CCACACTGGCTCGAGTCCCCATGAGTGTAAACTGTG...CTTTGTAAACACAGGGAGTGCTCTTAAAAACTGAGCCATCTCTCCAGCCCAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR CCA 90 bp | TACTGGGCTGGAGAGATGGCTCAGTTTTTAAGAGCACTCCCTGTGTTTACAAAGCCAGTGTGGATCCTTTaGTGGACTTGTAGGGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: YWAGEMAQFLRALPVFTKPVWIL*WTCREL Trigger: GAGTTCCCTACAAGTCCACCAAAGGATCCACACTGG...CTTTGTAAACACAGGGAGTGCTCTTAAAAACTGAGCCATCTCTCCAGCCCAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR CCA 90 bp | AGAGCACTCCCTGTGTTTACAAAGGGCGTTTGTTCAGATCCCAGCACCTACAAGGTCTTAGGAGAGAACTaGAATGTCCAAAGGTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RALPVFTKGVCSDPSTYKVLGEN*NVQRSS Trigger: GGAAGACCTTTGGACATTCCAGTTCTCTCCTAAGAC...CTTGTAGGTGCTGGGATCTGAACAAACGCCCTTTGTAAACACAGGGAGTGCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR TCA 90 bp | ACTGGAGTTGGGACAGTTGTGGCTTTCCATGTGGGTGTTGGGAATCAAACCTGGGGCTTCTCACCAGTATaGATTATTTTGTGCCTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TGVGTVVAFHVGVGNQTWGFSPV*IILCLK Trigger: TTTAAGGCACAAAATAATTCATACTGGTGAGAAGCC...CCAGGTTTGATTCCCAACACCCACATGGAAAGCCACAACTGTCCCAACTCCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR TCA 90 bp | TGGGCTGGAGAGATGGCTCAGTTTTTAAGAGCACTCCCTGTGTTTACAAAGGGCTTATGCTTTTGGAATTaGGTCCAAAGCATGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WAGEMAQFLRALPVFTKGLCFWN*VQSMKV Trigger: CACCTTCATGCTTTGGACTCAATTCCAAAAGCATAA...GCCCTTTGTAAACACAGGGAGTGCTCTTAAAAACTGAGCCATCTCTCCAGCCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR GCA 90 bp | AGAGCACTCCCTGTGTTTACAAAGGGCGTTTGTTCAGATCCCAGCACCTACAAGTTTATCAGATTTCTCTaGAGGCTCAGCACTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RALPVFTKGVCSDPSTYKFIRFL*RLSTLM Trigger: CATCAAAGTGCTGAGCCTGCAGAGAAATCTGATAAA...CTTGTAGGTGCTGGGATCTGAACAAACGCCCTTTGTAAACACAGGGAGTGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR CCA 90 bp | AGAGCACTCCCTGTGTTTACAAAGGGCGTTTGTTCAGATCCCAGCACCTACAAGTTCTTTCCATGTTCCTaGACTTCATTTGACTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RALPVFTKGVCSDPSTYKFFPCS*TSFDFC Trigger: GCAGAAGTCAAATGAAGTCCAGGAACATGGAAAGAA...CTTGTAGGTGCTGGGATCTGAACAAACGCCCTTTGTAAACACAGGGAGTGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR CCA 90 bp | AGAGCACTCCCTGTGTTTACAAAGGGCGTTTGTTCAGATCCCAGCACCTACAAGGGTTTGATGCCACTGTaGATTATTTCATGTCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RALPVFTKGVCSDPSTYKGLMPL*IISCRL Trigger: AAGACGACATGAAATAATCCACAGTGGCATCAAACC...CTTGTAGGTGCTGGGATCTGAACAAACGCCCTTTGTAAACACAGGGAGTGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR TCA 90 bp | AGAGCACTCCCTGTGTTTACAAAGGGCGTTTGTTCAGATCCCAGCACCTACAAGGAGAACTTAAATGAGTaGATGTTTTGCCACATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RALPVFTKGVCSDPSTYKENLNE*MFCHIA Trigger: AGCAATGTGGCAAAACATTCACTCATTTAAGTTCTC...CTTGTAGGTGCTGGGATCTGAACAAACGCCCTTTGTAAACACAGGGAGTGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR CCA 90 bp | AGAGCACTCCCTGTGTTTACAAAGGGCGTTTGTTCAGATCCCAGCACCTACAAGTCCTTATGTCTCCTATaGAAACCACATTTCTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: RALPVFTKGVCSDPSTYKSLCLL*KPHFSI Trigger: TATTGAGAAATGTGGTTTCCATAGGAGACATAAGGA...CTTGTAGGTGCTGGGATCTGAACAAACGCCCTTTGTAAACACAGGGAGTGCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR GCA 90 bp | TACTGGGCTGGAGAGATGGCTCAGTTTTTAAGAGCACTCCCTGTGTTTACAAAGCTTAGAGCATTTCTTTaGATGGTAATGTTGTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: YWAGEMAQFLRALPVFTKLRAFL*MVMLFM Trigger: CATGAACAACATTACCATGCAAAGAAATGCTCTAAG...CTTTGTAAACACAGGGAGTGCTCTTAAAAACTGAGCCATCTCTCCAGCCCAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR TCA 90 bp | TTCAACAATGAATCTAACACAATTCACAATGCAAACAGAAACGTGCCAGATTTGTCGTGCTTTTTAAGGTaGCTAAGAGACCGAAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FNNESNTIHNANRNVPDLSCFLR*LRDRKP Trigger: AGGCTTTCGGTCTCTTAGTCACCTTAAAAAGCACGA...CAAATCTGGCACGTTTCTGTTTGCATTGTGAATTGTGTTAGATTCATTGTTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR GCA 90 bp | TTCAACAATGAATCTAACACAATTCACAATGCAAACAGAAACGTGCCAGATTTGACTTCATTTGACTTCTaGCCTGGCCTAGGTTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FNNESNTIHNANRNVPDLTSFDF*PGLGFS Trigger: ACTGAAACCTAGGCCAGGGCAGAAGTCAAATGAAGT...CAAATCTGGCACGTTTCTGTTTGCATTGTGAATTGTGTTAGATTCATTGTTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR CCA 90 bp | GGTGCCCTGAGATTCCTTAGTATACACATTCTTTCCATGTTCCTGGACTTCATTTCCTTATGTCTCCTATaGAAACCACATTTCTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: GALRFLSIHILSMFLDFISLCLL*KPHFSI Trigger: TATTGAGAAATGTGGTTTCCATAGGAGACATAAGGA...AATGAAGTCCAGGAACATGGAAAGAATGTGTATACTAAGGAATCTCAGGGCACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234594.2 |
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| CDS-3UTR TCA 90 bp | TTCAACAATGAATCTAACACAATTCACAATGCAAACAGAAACGTGCCAGATTTGGGATTCACACCGCTGTaGACTATTTTATGCTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FNNESNTIHNANRNVPDLGFTPL*TILCFW Trigger: CCAAAAGCATAAAATAGTTCACAGCGGTGTGAATCC...CAAATCTGGCACGTTTCTGTTTGCATTGTGAATTGTGTTAGATTCATTGTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR GCA 90 bp | AATGAATCTAACACAATTCACAATGCAAACAGAAACGTGCCAGATTTGATTCGAAATGTTTTGCCACATTaGTTACAGACACAAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NESNTIHNANRNVPDLIRNVLPH*LQTQGF Trigger: GAAGCCTTGTGTCTGTAAGCAATGTGGCAAAACATT...TCGAATCAAATCTGGCACGTTTCTGTTTGCATTGTGAATTGTGTTAGATTCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR TCA 90 bp | AATGAATCTAACACAATTCACAATGCAAACAGAAACGTGCCAGATTTGATTCGAACAACTTTCTCACATTaGGAACATACATACGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: NESNTIHNANRNVPDLIRTTFSH*EHTYGL Trigger: TAACCCGTATGTATGTTCTCAATGTGAGAAAGTTGT...TCGAATCAAATCTGGCACGTTTCTGTTTGCATTGTGAATTGTGTTAGATTCATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR GCA 90 bp | GTTGACTTCTTATACATATTTGGAGGAAGCAGAGAAGTGAAGACTTTCTACATTGAATTTGAAGATCTCTaGACACTCATGACCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VDFLYIFGGSREVKTFYIEFEDL*TLMTFF Trigger: AAAGAAGGTCATGAGTGTGCAGAGATCTTCAAATTC...AATGTAGAAAGTCTTCACTTCTCTGCTTCCTCCAAATATGTATAAGAAGTCAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR CAA 90 bp | AGAGCACTCCCTGTGTTTACAAAGGGCGTTTGTTCAGATCCCAGCACCTACAAGCGAGTAAAGGTTTTCTaGCACAGTTTACACTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: RALPVFTKGVCSDPSTYKRVKVF*HSLHSW Trigger: CCATGAGTGTAAACTGTGCAAGAAAACCTTTACTCG...CTTGTAGGTGCTGGGATCTGAACAAACGCCCTTTGTAAACACAGGGAGTGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR CAA 90 bp | ACTGGAGTTGGGACAGTTGTGGCTTTCCATGTGGGTGTTGGGAATCAAACCTGGCACAACTTTCTCACATaGAGAACATACATACGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TGVGTVVAFHVGVGNQTWHNFLT*RTYIRV Trigger: AACCCGTATGTATGTTCTCAATGTGAGAAAGTTGTG...CCAGGTTTGATTCCCAACACCCACATGGAAAGCCACAACTGTCCCAACTCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR CAA 90 bp | TACTGGGCTGGAGAGATGGCTCAGTTTTTAAGAGCACTCCCTGTGTTTACAAAGCTTTGCATGGTAATGTaGTTCATGCCTCTTCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: YWAGEMAQFLRALPVFTKLCMVM*FMPLQG Trigger: TCCTTGAAGAGGCATGAACAACATTACCATGCAAAG...CTTTGTAAACACAGGGAGTGCTCTTAAAAACTGAGCCATCTCTCCAGCCCAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR CAA 90 bp | GTTGACTTCTTATACATATTTGGAGGAAGCAGAGAAGTGAAGACTTTCTACATTCTCCAGTGTGGAGTCTaGTGTGTCTCTGAAGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VDFLYIFGGSREVKTFYILQCGV*CVSEGK Trigger: CTTCCCTTCAGAGACACACAAGACTCCACACTGGAG...AATGTAGAAAGTCTTCACTTCTCTGCTTCCTCCAAATATGTATAAGAAGTCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR CAA 90 bp | TTCAACAATGAATCTAACACAATTCACAATGCAAACAGAAACGTGCCAGATTTGTGGCCAATGAGTACATaGACAAACCCATTTCTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: FNNESNTIHNANRNVPDLWPMST*TNPFLL Trigger: TAAAAGAAATGGGTTTGTCAATGTACTCATTGGCCA...CAAATCTGGCACGTTTCTGTTTGCATTGTGAATTGTGTTAGATTCATTGTTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS-3UTR CAA 90 bp | AATGAATCTAACACAATTCACAATGCAAACAGAAACGTGCCAGATTTGATTCGATTTATGCTTTTGGAATaGAGTCCAAAGCATGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: NESNTIHNANRNVPDLIRFMLLE*SPKHEG Trigger: ACCTTCATGCTTTGGACTCAATTCCAAAAGCATAAA...TCGAATCAAATCTGGCACGTTTCTGTTTGCATTGTGAATTGTGTTAGATTCATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200914.5 |
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| CDS CAA 72 bp | CCGCAAAGCGCTCTCAGAACTCACAACTTTCTCACATaGAGAACATACATACGGGTTACTGCCACTGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PQSALRTHNFLT*RTYIRVTATVD Trigger: ATCCACAGTGGCAGTAACCCGTATGTATGTTCTCAATGTGAGAAAGTTGTGAGTTCTGAGAGCGCTTTGCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080905.7 ENSMUST00000200914.5 |
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