Pregenerated sensors for ZFP810 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066829Ensembl transcript IDs: ENSMUST00000086278.7, ENSMUST00000215202.2
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGAGTCTTGCCAAGATCACTCACATGGGTCAGAATGCAAAGGTGTaGCTGGCTAAATCATTAGCTGTGCGCCACTACTTTATGAGGTTT | + |
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Preference number: 1 (lower is better) Translates to: MSLAKITHMGQNAKV*LAKSLAVRHYFMRF Trigger: AAACCTCATAAAGTAGTGGCGCACAGCTAATGATTTAGCCAGGCACACCTTTGCATTCTGACCCATGTGAGTGATCTTGGCAAGACTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| 3UTR GCA 90 bp | TGTGTGATAGCTCTGCTTTGTGCTATACTGTGGCTTCAGGTAAAATaGTTCCAAACACACTTCACATTCATAGGATTTGGCCCCTCGGTG | + |
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Preference number: 1 (lower is better) Translates to: CVIALLCAILWLQVK*FQTHFTFIGFGPSV Trigger: CACCGAGGGGCCAAATCCTATGAATGTGAAGTGTGTTTGGAAGCATTTTACCTGAAGCCACAGTATAGCACAAAGCAGAGCTATCACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215202.2 |
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| 3UTR TCA 90 bp | GCCTTGATTTTGTGTCTTGCTGTGCTGTTAAACATCAAGTCCAAATaGGTCTTGCCAAGATCACTCACATGGGTCAGAATGCAAAGGTGT | + |
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Preference number: 1 (lower is better) Translates to: ALILCLAVLLNIKSK*VLPRSLTWVRMQRC Trigger: ACACCTTTGCATTCTGACCCATGTGAGTGATCTTGGCAAGACTCATTTGGACTTGATGTTTAACAGCACAGCAAGACACAAAATCAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| 3UTR CCA 90 bp | GGTAGACTTAGGATAGAAAGCTTCTCTACACTTCTTACAGTCACATaGATTCTCGCATGTGTGATAGCTCTGCTTTGTGCTATACTGTGG | + |
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Preference number: 1 (lower is better) Translates to: GRLRIESFSTLLTVT*ILACVIALLCAILW Trigger: CCACAGTATAGCACAAAGCAGAGCTATCACACATGCGAGAATCCATGTGACTGTAAGAAGTGTAGAGAAGCTTTCTATCCTAAGTCTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215202.2 |
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| 3UTR CCA 90 bp | ACATGGATTCTCGCATGTGTGATAGCTCTGCTTTGTGCTATACTGTaGCTTCAGGTAAAATGCTTCCAAACACACTTCACATTCATAGGA | + |
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Preference number: 1 (lower is better) Translates to: TWILACVIALLCAIL*LQVKCFQTHFTFIG Trigger: TCCTATGAATGTGAAGTGTGTTTGGAAGCATTTTACCTGAAGCCACAGTATAGCACAAAGCAGAGCTATCACACATGCGAGAATCCATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215202.2 |
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| 3UTR TCA 90 bp | TTCTTCAGAATTGCTTTATATTCTCCAAAAATGGACTCATGGGCATaGATGTTGAAACTCCAGGTGATGTGTAAGAACTCTCAAACCCAG | + |
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Preference number: 1 (lower is better) Translates to: FFRIALYSPKMDSWA*MLKLQVMCKNSQTQ Trigger: CTGGGTTTGAGAGTTCTTACACATCACCTGGAGTTTCAACATTCATGCCCATGAGTCCATTTTTGGAGAATATAAAGCAATTCTGAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| 3UTR GCA 90 bp | CATTGTGTTTATTTGGTAGAATACAGTTGGCTGCTTCATTTCCAATaGCATCGCAGACAATTCCATCTGGAAATTAACGTGCAAGTTACA | + |
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Preference number: 1 (lower is better) Translates to: HCVYLVEYSWLLHFQ*HRRQFHLEINVQVT Trigger: TGTAACTTGCACGTTAATTTCCAGATGGAATTGTCTGCGATGGCATTGGAAATGAAGCAGCCAACTGTATTCTACCAAATAAACACAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| 3UTR-3UTR GCA 90 bp | ACCTCTCTCAAGCCTCTGATACTGACTGAGGGTAGACTTAGGATAGAAAGCTTCTGGCTTCAGGTAAAATaGTTCCAAACACACTTCACA | + |
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Preference number: 2 (lower is better) Translates to: TSLKPLILTEGRLRIESFWLQVK*FQTHFT Trigger: TGTGAAGTGTGTTTGGAAGCATTTTACCTGAAGCCA...GAAGCTTTCTATCCTAAGTCTACCCTCAGTCAGTATCAGAGGCTTGAGAGAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215202.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTGTAAGAACTCTCAAACCCAGAAGAACAGGAAATGTGTGTGTTTCACAAGCGTCTATACATGGAGATaGGCTAGAGACCTTTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: MCKNSQTQKNRKCVCFTSVYTWR*ARDLSY Trigger: GTAAGAAAGGTCTCTAGCTCATCTCCATGTATAGAC...GCTTGTGAAACACACACATTTCCTGTTCTTCTGGGTTTGAGAGTTCTTACACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| 3UTR-3UTR CCA 90 bp | TCCTGTATCACACTCCTACGCTTTAGTGTATTTTGTTGTGTTTCTGATGTCAGTCCAAGATCACTCACATaGGTCAGAATGCAAAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: SCITLLRFSVFCCVSDVSPRSLT*VRMQRC Trigger: ACACCTTTGCATTCTGACCCATGTGAGTGATCTTGG...ACTGACATCAGAAACACAACAAAATACACTAAAGCGTAGGAGTGTGATACAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| 3UTR-3UTR TCA 90 bp | TCCTGTATCACACTCCTACGCTTTAGTGTATTTTGTTGTGTTTCTGATGTCAGTATCTCACAAAAGATTTaGCCACACACAGTCTTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: SCITLLRFSVFCCVSDVSISQKI*PHTVFS Trigger: TGAAAAGACTGTGTGTGGTCAAATCTTTTGTGAGAT...ACTGACATCAGAAACACAACAAAATACACTAAAGCGTAGGAGTGTGATACAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| 3UTR GCA 72 bp | GCCAAGATCACTCACATGGGTCAGAATGCAAAGGTGTaGCTGGCTAAATCATTAGCTGTGCGCCACTACTTT | + |
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Preference number: 3 (lower is better) Translates to: AKITHMGQNAKV*LAKSLAVRHYF Trigger: AAAGTAGTGGCGCACAGCTAATGATTTAGCCAGGCACACCTTTGCATTCTGACCCATGTGAGTGATCTTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| 3UTR CCA 72 bp | CTCGCATGTGTGATAGCTCTGCTTTGTGCTATACTGTaGCTTCAGGTAAAATGCTTCCAAACACACTTCACA | + |
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Preference number: 3 (lower is better) Translates to: LACVIALLCAIL*LQVKCFQTHFT Trigger: TGTGAAGTGTGTTTGGAAGCATTTTACCTGAAGCCACAGTATAGCACAAAGCAGAGCTATCACACATGCGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215202.2 |
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| 3UTR-3UTR CAA 90 bp | AAGCCTCTGATACTGACTGAGGGTAGACTTAGGATAGAAAGCTTCTCTACACTTTGTGATAGCTCTGCTTaGTGCTATACTGTGGCTTCA | + |
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Preference number: 3 (lower is better) Translates to: KPLILTEGRLRIESFSTLCDSSA*CYTVAS Trigger: TGAAGCCACAGTATAGCACAAAGCAGAGCTATCACA...AAGTGTAGAGAAGCTTTCTATCCTAAGTCTACCCTCAGTCAGTATCAGAGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215202.2 |
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| 3UTR TCA 72 bp | CTGCATCAGTATGACTGTGAATATGAGAACTGCCCATaGTACAAGAAATTCATAGTCAGCCTGGCCTGCATA | + |
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Preference number: 3 (lower is better) Translates to: LHQYDCEYENCP*YKKFIVSLACI Trigger: TATGCAGGCCAGGCTGACTATGAATTTCTTGTATCATGGGCAGTTCTCATATTCACAGTCATACTGATGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| 3UTR GCA 72 bp | GCTCTGCTTTGTGCTATACTGTGGCTTCAGGTAAAATaGTTCCAAACACACTTCACATTCATAGGATTTGGC | + |
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Preference number: 3 (lower is better) Translates to: ALLCAILWLQVK*FQTHFTFIGFG Trigger: GCCAAATCCTATGAATGTGAAGTGTGTTTGGAAGCATTTTACCTGAAGCCACAGTATAGCACAAAGCAGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215202.2 |
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| 3UTR GCA 72 bp | TATTTGGTAGAATACAGTTGGCTGCTTCATTTCCAATaGCATCGCAGACAATTCCATCTGGAAATTAACGTG | + |
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Preference number: 3 (lower is better) Translates to: YLVEYSWLLHFQ*HRRQFHLEINV Trigger: CACGTTAATTTCCAGATGGAATTGTCTGCGATGGCATTGGAAATGAAGCAGCCAACTGTATTCTACCAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR GCA 90 bp | ATGTGTAAGAACTCTCAAACCCAGAAGAACAGGAAATGTGTGTGTTTCACAAGCCTGAGGCTCCTGCTGTaGTCCGTGGCCCGAGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: MCKNSQTQKNRKCVCFTSLRLLL*SVARVP Trigger: AGGGACTCGGGCCACGGAGCACAGCAGGAGCCTCAG...GCTTGTGAAACACACACATTTCCTGTTCTTCTGGGTTTGAGAGTTCTTACACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR GCA 90 bp | GTCAGCCTGGCCTGCATATGTAGAACTTGTCTTATGAAACAAGGTGTGATTTTAGGTTTGGCCATGCAGTaGCCCAAGGACACCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VSLACICRTCLMKQGVILGLAMQ*PKDTRL Trigger: CAGCCTGGTGTCCTTGGGGCACTGCATGGCCAAACC...TAAAATCACACCTTGTTTCATAAGACAAGTTCTACATATGCAGGCCAGGCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR GCA 90 bp | GAGGGTAGACTTAGGATAGAAAGCTTCTCTACACTTCTTACAGTCACATGGATTGGTTTGGCCATGCAGTaGCCCAAGGACACCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: EGRLRIESFSTLLTVTWIGLAMQ*PKDTRL Trigger: CAGCCTGGTGTCCTTGGGGCACTGCATGGCCAAACC...AATCCATGTGACTGTAAGAAGTGTAGAGAAGCTTTCTATCCTAAGTCTACCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215202.2 |
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| CDS-3UTR GCA 90 bp | GTGATAGCTCTGCTTTGTGCTATACTGTGGCTTCAGGTAAAATGCTTCCAAACAGCTCAGGTTTGGCCATaGAGTGCCCCAAGGACACCA | + |
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Preference number: 4 (lower is better) Translates to: VIALLCAILWLQVKCFQTAQVWP*SAPRTP Trigger: TGGTGTCCTTGGGGCACTGCATGGCCAAACCTGAGC...TGTTTGGAAGCATTTTACCTGAAGCCACAGTATAGCACAAAGCAGAGCTATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215202.2 |
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| 3UTR CAA 72 bp | AGAGCTGAGCACCTCCATGCCGAGATTTCCTCCGCCTaGATTTTGTGTCTTGCTGTGCTGTTAAACATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RAEHLHAEISSA*ILCLAVLLNIK Trigger: CTTGATGTTTAACAGCACAGCAAGACACAAAATCAAGGCGGAGGAAATCTCGGCATGGAGGTGCTCAGCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR GCA 90 bp | TGTGTTTATTTGGTAGAATACAGTTGGCTGCTTCATTTCCAATGCCATCGCAGAGCTCAGGTTTGGCCATaGAGTGCCCCAAGGACACCA | + |
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Preference number: 4 (lower is better) Translates to: CVYLVEYSWLLHFQCHRRAQVWP*SAPRTP Trigger: TGGTGTCCTTGGGGCACTGCATGGCCAAACCTGAGC...TCTGCGATGGCATTGGAAATGAAGCAGCCAACTGTATTCTACCAAATAAACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR TCA 90 bp | CTCCATGCCGAGATTTCCTCCGCCTTGATTTTGTGTCTTGCTGTGCTGTTAAACCGGTGGATTTCCTCATaGATCTTCAGTTCTGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LHAEISSALILCLAVLLNRWISS*IFSSAS Trigger: TGAAGCAGAACTGAAGATTCATGAGGAAATCCACCG...GTTTAACAGCACAGCAAGACACAAAATCAAGGCGGAGGAAATCTCGGCATGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR TCA 90 bp | CTCCATGCCGAGATTTCCTCCGCCTTGATTTTGTGTCTTGCTGTGCTGTTAAACTTCTCAGATGCACATTaGGCTGGGATTTGCTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: LHAEISSALILCLAVLLNFSDAH*AGICCR Trigger: TCTACAGCAAATCCCAGCTCAATGTGCATCTGAGAA...GTTTAACAGCACAGCAAGACACAAAATCAAGGCGGAGGAAATCTCGGCATGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR TCA 90 bp | ATGGGTCAGAATGCAAAGGTGTGCCTGGCTAAATCATTAGCTGTGCGCCACTACTTCTCTGATGTCGAGTaGGTTCGTATTTGCACTGAA | + |
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Preference number: 4 (lower is better) Translates to: MGQNAKVCLAKSLAVRHYFSDVE*VRICTE Trigger: TTCAGTGCAAATACGAACTCACTCGACATCAGAGAA...GTAGTGGCGCACAGCTAATGATTTAGCCAGGCACACCTTTGCATTCTGACCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR GCA 90 bp | ATGGGTCAGAATGCAAAGGTGTGCCTGGCTAAATCATTAGCTGTGCGCCACTACTGGCTTCAGGTAAAATaGTTCCAAACACACTTCACA | + |
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Preference number: 4 (lower is better) Translates to: MGQNAKVCLAKSLAVRHYWLQVK*FQTHFT Trigger: TGTGAAGTGTGTTTGGAAGCATTTTACCTGAAGCCA...GTAGTGGCGCACAGCTAATGATTTAGCCAGGCACACCTTTGCATTCTGACCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR GCA 90 bp | ATGGGTCAGAATGCAAAGGTGTGCCTGGCTAAATCATTAGCTGTGCGCCACTACTGTAGAAAGCCTTCCTaGACTCTTTACAGTCATAAG | + |
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Preference number: 4 (lower is better) Translates to: MGQNAKVCLAKSLAVRHYCRKPS*TLYSHK Trigger: CTTATGACTGTAAAGAGTGCAGGAAGGCTTTCTACA...GTAGTGGCGCACAGCTAATGATTTAGCCAGGCACACCTTTGCATTCTGACCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR CCA 90 bp | GAGGGTAGACTTAGGATAGAAAGCTTCTCTACACTTCTTACAGTCACATGGATTAAATCAGCTCAGGTTTaGCCATGCAGTGCCCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: EGRLRIESFSTLLTVTWIKSAQV*PCSAPR Trigger: CCTTGGGGCACTGCATGGCCAAACCTGAGCTGATTT...AATCCATGTGACTGTAAGAAGTGTAGAGAAGCTTTCTATCCTAAGTCTACCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215202.2 |
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| CDS-3UTR CCA 90 bp | TCCTGTATCACACTCCTACGCTTTAGTGTATTTTGTTGTGTTTCTGATGTCAGTAAATCAGCTCAGGTTTaGCCATGCAGTGCCCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: SCITLLRFSVFCCVSDVSKSAQV*PCSAPR Trigger: CCTTGGGGCACTGCATGGCCAAACCTGAGCTGATTT...ACTGACATCAGAAACACAACAAAATACACTAAAGCGTAGGAGTGTGATACAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR CCA 90 bp | GGCCCAGAACACTCTATTTGGAAGAGGTCAGCACAAACTCACACTGATGCATCTCTTTGTGCTATACTGTaGCTTCAGGTAAAATGCTTC | + |
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Preference number: 4 (lower is better) Translates to: GPEHSIWKRSAQTHTDASLCAIL*LQVKCF Trigger: GAAGCATTTTACCTGAAGCCACAGTATAGCACAAAG...AGATGCATCAGTGTGAGTTTGTGCTGACCTCTTCCAAATAGAGTGTTCTGGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR TCA 90 bp | ATGTGTGATAGCTCTGCTTTGTGCTATACTGTGGCTTCAGGTAAAATGCTTCCAGTCCCTGTTCTAAGTTaGAAATCAGCTCAGGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: MCDSSALCYTVASGKMLPVPVLS*KSAQVW Trigger: CCAAACCTGAGCTGATTTTCAACTTAGAACAGGGAC...TGGAAGCATTTTACCTGAAGCCACAGTATAGCACAAAGCAGAGCTATCACACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215202.2 |
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| CDS-3UTR GCA 90 bp | CTCCATGCCGAGATTTCCTCCGCCTTGATTTTGTGTCTTGCTGTGCTGTTAAACAACCAGTTCTTCATTTaGTGTATGGCTGTTGATTTC | + |
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Preference number: 4 (lower is better) Translates to: LHAEISSALILCLAVLLNNQFFI*CMAVDF Trigger: GAAATCAACAGCCATACAGCAAATGAAGAACTGGTT...GTTTAACAGCACAGCAAGACACAAAATCAAGGCGGAGGAAATCTCGGCATGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR GCA 90 bp | GTAAGGTGTCACCTGTACTCCTGTATCACACTCCTACGCTTTAGTGTATTTTGTGATAGCTCTGCTTTGTaGTATACTGTGGCTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: VRCHLYSCITLLRFSVFCDSSAL*YTVASG Trigger: ACCTGAAGCCACAGTATAGCACAAAGCAGAGCTATC...ACAAAATACACTAAAGCGTAGGAGTGTGATACAGGAGTACAGGTGACACCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR GCA 90 bp | ATTCTCGCATGTGTGATAGCTCTGCTTTGTGCTATACTGTGGCTTCAGGTAAAAATGAATCTTCAGTTCTaGCTGAGAGGTTCCAGACTG | + |
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Preference number: 4 (lower is better) Translates to: ILACVIALLCAILWLQVKMNLQF*LRGSRL Trigger: CAGTCTGGAACCTCTCAGGCAGAACTGAAGATTCAT...TTTTACCTGAAGCCACAGTATAGCACAAAGCAGAGCTATCACACATGCGAGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215202.2 |
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| CDS-3UTR CCA 90 bp | GTCAGCCTGGCCTGCATATGTAGAACTTGTCTTATGAAACAAGGTGTGATTTTACACATTCATAGGATTTaGCCCCTCGGTGGATTTCCT | + |
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Preference number: 4 (lower is better) Translates to: VSLACICRTCLMKQGVILHIHRI*PLGGFP Trigger: AGGAAATCCACCGAGGGGCCAAATCCTATGAATGTG...TAAAATCACACCTTGTTTCATAAGACAAGTTCTACATATGCAGGCCAGGCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR TCA 90 bp | ATGTGTAAGAACTCTCAAACCCAGAAGAACAGGAAATGTGTGTGTTTCACAAGCGTCCCTGTTCTAAGTTaGAAATCAGCTCAGGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: MCKNSQTQKNRKCVCFTSVPVLS*KSAQVW Trigger: CCAAACCTGAGCTGATTTTCAACTTAGAACAGGGAC...GCTTGTGAAACACACACATTTCCTGTTCTTCTGGGTTTGAGAGTTCTTACACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR TCA 90 bp | GTCAGCCTGGCCTGCATATGTAGAACTTGTCTTATGAAACAAGGTGTGATTTTATTCTCTGATGTACAGTaGGGTCAGAATTGCGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: VSLACICRTCLMKQGVILFSDVQ*GQNCGR Trigger: TCTACCGCAATTCTGACCTCACTGTACATCAGAGAA...TAAAATCACACCTTGTTTCATAAGACAAGTTCTACATATGCAGGCCAGGCTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR TCA 90 bp | TCCTGTATCACACTCCTACGCTTTAGTGTATTTTGTTGTGTTTCTGATGTCAGTAGTTCGTATTTGCACTaGAAAGCTTTCCCGCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: SCITLLRFSVFCCVSDVSSSYLH*KAFPQS Trigger: AGACTGCGGGAAAGCTTTTCAGTGCAAATACGAACT...ACTGACATCAGAAACACAACAAAATACACTAAAGCGTAGGAGTGTGATACAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR GCA 90 bp | ATGTGTAAGAACTCTCAAACCCAGAAGAACAGGAAATGTGTGTGTTTCACAAGCTTTGCCAGAAATGTCTaGTATCATTTTCCTGGATGG | + |
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Preference number: 4 (lower is better) Translates to: MCKNSQTQKNRKCVCFTSFARNV*YHFPGW Trigger: CCATCCAGGAAAATGATAGCAGACATTTCTGGCAAA...GCTTGTGAAACACACACATTTCCTGTTCTTCTGGGTTTGAGAGTTCTTACACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR TCA 90 bp | TGTGTTTATTTGGTAGAATACAGTTGGCTGCTTCATTTCCAATGCCATCGCAGATTGCTGTATGGCTGTTaGTTTCAATTTGCCAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: CVYLVEYSWLLHFQCHRRLLYGC*FQFARN Trigger: ATTTCTGGCAAATTGAAATCAACAGCCATACAGCAA...TCTGCGATGGCATTGGAAATGAAGCAGCCAACTGTATTCTACCAAATAAACACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR TCA 90 bp | TCCTGTATCACACTCCTACGCTTTAGTGTATTTTGTTGTGTTTCTGATGTCAGTATGTACAGTGAGCTGTaGATTGCAGTAGAAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: SCITLLRFSVFCCVSDVSMYSEL*IAVESF Trigger: AAAGCTTTCTACTGCAATTCACAGCTCACTGTACAT...ACTGACATCAGAAACACAACAAAATACACTAAAGCGTAGGAGTGTGATACAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR GCA 90 bp | CACTCCTACGCTTTAGTGTATTTTGTTGTGTTTCTGATGTCAGTTGAGTTTCAACAGCGAGTTGTGACTTaGAGTAGAAAGCTTTATTGC | + |
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Preference number: 4 (lower is better) Translates to: HSYALVYFVVFLMSVEFQQRVVT*SRKLYC Trigger: GCAATAAAGCTTTCTACTGCAAGTCACAACTCGCTG...TTGAAACTCAACTGACATCAGAAACACAACAAAATACACTAAAGCGTAGGAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR GCA 90 bp | TGTGTTTATTTGGTAGAATACAGTTGGCTGCTTCATTTCCAATGCCATCGCAGACTGTTGATTTCAATTTaGCAGAAATGTCTGCTATCA | + |
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Preference number: 4 (lower is better) Translates to: CVYLVEYSWLLHFQCHRRLLISI*QKCLLS Trigger: TGATAGCAGACATTTCTGGCAAATTGAAATCAACAG...TCTGCGATGGCATTGGAAATGAAGCAGCCAACTGTATTCTACCAAATAAACACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR GCA 90 bp | ATGTGTAAGAACTCTCAAACCCAGAAGAACAGGAAATGTGTGTGTTTCACAAGCATGAATCTTCAGTTCTaGTTCAACCAGTTCTTCATT | + |
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Preference number: 4 (lower is better) Translates to: MCKNSQTQKNRKCVCFTSMNLQF*FNQFFI Trigger: AATGAAGAACTGGTTGAAGCAGAACTGAAGATTCAT...GCTTGTGAAACACACACATTTCCTGTTCTTCTGGGTTTGAGAGTTCTTACACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR GCA 90 bp | ATGTGTAAGAACTCTCAAACCCAGAAGAACAGGAAATGTGTGTGTTTCACAAGCTGTAAAAAGCTTTCTTaGACTCTCTACATCCATAAG | + |
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Preference number: 4 (lower is better) Translates to: MCKNSQTQKNRKCVCFTSCKKLS*TLYIHK Trigger: CTTATGGATGTAGAGAGTGCAAGAAAGCTTTTTACA...GCTTGTGAAACACACACATTTCCTGTTCTTCTGGGTTTGAGAGTTCTTACACAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR CCA 90 bp | ATGTGTAAGAACTCTCAAACCCAGAAGAACAGGAAATGTGTGTGTTTCACAAGCTCTTCATTTGCTGTATaGCTGTTGATTTCAATTTGC | + |
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Preference number: 4 (lower is better) Translates to: MCKNSQTQKNRKCVCFTSSSFAV*LLISIC Trigger: GCAAATTGAAATCAACAGCCATACAGCAAATGAAGA...GCTTGTGAAACACACACATTTCCTGTTCTTCTGGGTTTGAGAGTTCTTACACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| 3UTR CAA 72 bp | GATTTTACAGACAGCACTCAAAAAGTCATGATCAATTaGCTGCAACTTCTTCAGAATTGCTTTATATTCTCC | + |
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Preference number: 4 (lower is better) Translates to: DFTDSTQKVMIN*LQLLQNCFIFS Trigger: GGAGAATATAAAGCAATTCTGAAGAAGTTGCAGCAAATTGATCATGACTTTTTGAGTGCTGTCTGTAAAATC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR CAA 90 bp | ATGGGTCAGAATGCAAAGGTGTGCCTGGCTAAATCATTAGCTGTGCGCCACTACTGTGATAGCTCTGCTTaGTGCTATACTGTGGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: MGQNAKVCLAKSLAVRHYCDSSA*CYTVAS Trigger: TGAAGCCACAGTATAGCACAAAGCAGAGCTATCACA...GTAGTGGCGCACAGCTAATGATTTAGCCAGGCACACCTTTGCATTCTGACCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR CAA 90 bp | CGAGATTTCCTCCGCCTTGATTTTGTGTCTTGCTGTGCTGTTAAACATCAAGTCACCAGGCTACTCACTTaGTTGACACCTGAGAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: RDFLRLDFVSCCAVKHQVTRLLT*LTPERF Trigger: GAACCTCTCAGGTGTCAACAAAGTGAGTAGCCTGGT...GACTTGATGTTTAACAGCACAGCAAGACACAAAATCAAGGCGGAGGAAATCTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR CAA 90 bp | GTCAGCCTGGCCTGCATATGTAGAACTTGTCTTATGAAACAAGGTGTGATTTTATTTGCTGTATGGCTGTaGATTTCAATTTGCCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: VSLACICRTCLMKQGVILFAVWL*ISICQK Trigger: TTTCTGGCAAATTGAAATCAACAGCCATACAGCAAA...TAAAATCACACCTTGTTTCATAAGACAAGTTCTACATATGCAGGCCAGGCTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS-3UTR CAA 90 bp | TCCTGTATCACACTCCTACGCTTTAGTGTATTTTGTTGTGTTTCTGATGTCAGTAGCTTTATTGCATACTaGACACTCATAAGGCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: SCITLLRFSVFCCVSDVSSFIAY*TLIRLL Trigger: GAGAAGCCTTATGAGTGTCAAGTATGCAATAAAGCT...ACTGACATCAGAAACACAACAAAATACACTAAAGCGTAGGAGTGTGATACAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS TCA 72 bp | TTTCCTGGATGGTATCAACCAGGCTACTCACTTTGTTaGCACCTGAGAGGTTCCAGACTGAGGCTCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: FPGWYQPGYSLC*HLRGSRLRLLL Trigger: CAGCAGGAGCCTCAGTCTGGAACCTCTCAGGTGTCAACAAAGTGAGTAGCCTGGTTGATACCATCCAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS CAA 72 bp | TTTTCCTGGATGGTATCAACCAGGCTACTCACTTTGTaGACACCTGAGAGGTTCCAGACTGAGGCTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: FSWMVSTRLLTL*TPERFQTEAPA Trigger: AGCAGGAGCCTCAGTCTGGAACCTCTCAGGTGTCAACAAAGTGAGTAGCCTGGTTGATACCATCCAGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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| CDS CAA 72 bp | TCATTTTCCTGGATGGTATCAACCAGGCTACTCACTTaGTTGACACCTGAGAGGTTCCAGACTGAGGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SFSWMVSTRLLT*LTPERFQTEAP Trigger: AGGAGCCTCAGTCTGGAACCTCTCAGGTGTCAACAAAGTGAGTAGCCTGGTTGATACCATCCAGGAAAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086278.7 |
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