Pregenerated sensors for ZFP809 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057982Ensembl transcript IDs: ENSMUST00000072465.9, ENSMUST00000213371.2, ENSMUST00000215618.2, ENSMUST00000215902.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGTTGCCCTAGAGTGCATGGCCGGCCAGGCAACCAGAGCTTGAGTTaGCAGCACAAGACGAGGGAATGCGCTGGTTCTTTTATTATTTCC | + |
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Preference number: 1 (lower is better) Translates to: RCPRVHGRPGNQSLS*QHKTRECAGSFIIS Trigger: GGAAATAATAAAAGAACCAGCGCATTCCCTCGTCTTGTGCTGGCAACTCAAGCTCTGGTTGCCTGGCCGGCCATGCACTCTAGGGCAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215902.2 |
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| 3UTR CCA 90 bp | TTTTCCTTCGTGTGGTGGCTTATCTGGGTTCAAGAGAGAAAGGTATaGCAGCAAAGTGTGGGTTTGCCTGAGGTCCACTGCAAAGGTCTT | + |
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Preference number: 1 (lower is better) Translates to: FSFVWWLIWVQERKV*QQSVGLPEVHCKGL Trigger: AAGACCTTTGCAGTGGACCTCAGGCAAACCCACACTTTGCTGCCATACCTTTCTCTCTTGAACCCAGATAAGCCACCACACGAAGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215902.2 |
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| 3UTR TCA 90 bp | CCTAACAGGAAACCACAGCTCCCTTTGGAACTGTTCTTTCATGAGTaGGTAAGAGACTTCGGTCAGGACGAATCTACATTCTCACTCTTC | + |
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Preference number: 1 (lower is better) Translates to: PNRKPQLPLELFFHE*VRDFGQDESTFSLF Trigger: GAAGAGTGAGAATGTAGATTCGTCCTGACCGAAGTCTCTTACTCACTCATGAAAGAACAGTTCCAAAGGGAGCTGTGGTTTCCTGTTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213371.2 |
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| 3UTR CCA 90 bp | CCATTGTTTCTGAACTGCATTTGTGTTGCGTTTTCCTTCGTGTGGTaGCTTATCTGGGTTCAAGAGAGAAAGGTATGGCAGCAAAGTGTG | + |
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Preference number: 1 (lower is better) Translates to: PLFLNCICVAFSFVW*LIWVQERKVWQQSV Trigger: CACACTTTGCTGCCATACCTTTCTCTCTTGAACCCAGATAAGCCACCACACGAAGGAAAACGCAACACAAATGCAGTTCAGAAACAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215902.2 |
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| 3UTR TCA 90 bp | GATCCTCTTCCTCTGTCTGTGCGTTTTCTGATGAGACGTGAGGTCTaGCTTCCAATAGTACATTTTACTGCATTCATCACACTCATAGGG | + |
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Preference number: 1 (lower is better) Translates to: DPLPLSVRFLMRREV*LPIVHFTAFITLIG Trigger: CCCTATGAGTGTGATGAATGCAGTAAAATGTACTATTGGAAGTCAGACCTCACGTCTCATCAGAAAACGCACAGACAGAGGAAGAGGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213371.2 ENSMUST00000215902.2 |
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| 3UTR TCA 90 bp | ACTCATAGATCCTCTTCCTCTGTCTGTGCGTTTTCTGATGAGACGTaGGGTCTGACTTCCAATAGTACATTTTACTGCATTCATCACACT | + |
|
Preference number: 1 (lower is better) Translates to: THRSSSSVCAFSDET*GLTSNSTFYCIHHT Trigger: AGTGTGATGAATGCAGTAAAATGTACTATTGGAAGTCAGACCTCACGTCTCATCAGAAAACGCACAGACAGAGGAAGAGGATCTATGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213371.2 ENSMUST00000215902.2 |
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| 3UTR TCA 90 bp | TACATTCATAAGGATTCTCAGATGAATGAGCAATCCGATGTGCAGTaGGTTGTGACTGATGGGAGAAAGCCTTCTTGCATTCTGTACATT | + |
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Preference number: 1 (lower is better) Translates to: YIHKDSQMNEQSDVQ*VVTDGRKPSCILYI Trigger: AATGTACAGAATGCAAGAAGGCTTTCTCCCATCAGTCACAACTCACTGCACATCGGATTGCTCATTCATCTGAGAATCCTTATGAATGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213371.2 ENSMUST00000215902.2 |
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| 3UTR GCA 90 bp | TGTGGGATTGTGTGGTATACCGGTTACATGCTTTATGTTGAAATATaGAACGATTTGCCTCATTTGATTGGATACATATGCAGGAGTGTT | + |
|
Preference number: 1 (lower is better) Translates to: CGIVWYTGYMLYVEI*NDLPHLIGYICRSV Trigger: AACACTCCTGCATATGTATCCAATCAAATGAGGCAAATCGTTGCATATTTCAACATAAAGCATGTAACCGGTATACCACACAATCCCACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213371.2 ENSMUST00000215618.2 ENSMUST00000215902.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAAAGTGTGGGTTTGCCTGAGGTCCACTGCAAAGGTCTTGGGGGAGTTGAAGTTTTCTGATGTGCTGTaGGTTGACACTTCCAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: SKVWVCLRSTAKVLGELKFSDVL*VDTSSG Trigger: TCCACTGGAAGTGTCAACTCACAGCACATCAGAAAA...CTTCAACTCCCCCAAGACCTTTGCAGTGGACCTCAGGCAAACCCACACTTTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215902.2 |
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| 3UTR CAA 90 bp | CTTGAAGCTTCTGCTAGGCTCCATGGCCCAAATCCACGCTCCAAATaGAAGATCAACTTAGGTTTGGCAATGCAGGGGTCTGTAAATTGG | + |
|
Preference number: 2 (lower is better) Translates to: LEASARLHGPNPRSK*KINLGLAMQGSVNW Trigger: CCAATTTACAGACCCCTGCATTGCCAAACCTAAGTTGATCTTCAATTTGGAGCGTGGATTTGGGCCATGGAGCCTAGCAGAAGCTTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213371.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTGTCACTCAGAGTACTCACGTTATGGACACCTGGGAGGCTCCTGCTTGAAGATTCTCACTCTTCACTaGCTACAAGAGCATCTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: WCHSEYSRYGHLGGSCLKILTLH*LQEHLH Trigger: ATGAAGATGCTCTTGTAGCCAGTGAAGAGTGAGAAT...CTTCAAGCAGGAGCCTCCCAGGTGTCCATAACGTGAGTACTCTGAGTGACACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213371.2 |
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| 3UTR-3UTR GCA 90 bp | CAAGACGAGGGAATGCGCTGGTTCTTTTATTATTTCCCACAACACATAACCATGAGCAAAGTGTGGGTTTaGCTGAGGTCCACTGCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: QDEGMRWFFYYFPQHITMSKVWV*LRSTAK Trigger: CTTTGCAGTGGACCTCAGGCAAACCCACACTTTGCT...CATGGTTATGTGTTGTGGGAAATAATAAAAGAACCAGCGCATTCCCTCGTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215902.2 |
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| 3UTR-3UTR GCA 90 bp | CCACGCTCCAAATTGAAGATCAACTTAGGTTTGGCAATGCAGGGGTCTGTAAATATAATAAGCAAATGGTaGCAGAGCCCTGGCCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: PRSKLKINLGLAMQGSVNIISKW*QSPGPV Trigger: AACTGGGCCAGGGCTCTGGCACCATTTGCTTATTAT...ATTTACAGACCCCTGCATTGCCAAACCTAAGTTGATCTTCAATTTGGAGCGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213371.2 |
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| 3UTR-3UTR CCA 90 bp | CGAGGGAATGCGCTGGTTCTTTTATTATTTCCCACAACACATAACCATGTCCCCTCCTGTGGGATTGTGTaGTATACCGGTTACATGCTT | + |
|
Preference number: 2 (lower is better) Translates to: RGNALVLLLFPTTHNHVPSCGIV*YTGYML Trigger: AAGCATGTAACCGGTATACCACACAATCCCACAGGA...GGGGACATGGTTATGTGTTGTGGGAAATAATAAAAGAACCAGCGCATTCCCTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213371.2 ENSMUST00000215902.2 |
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| 3UTR-3UTR GCA 90 bp | GCGCTGGTTCTTTTATTATTTCCCACAACACATAACCATGTCCCCATCTTAAAATTGCCTGAGGTCCACTaGAAAGGTCTTGGGGGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: ALVLLLFPTTHNHVPILKLPEVH*KGLGGV Trigger: AACTCCCCCAAGACCTTTGCAGTGGACCTCAGGCAA...TTTTAAGATGGGGACATGGTTATGTGTTGTGGGAAATAATAAAAGAACCAGCGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000215902.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGACGAGGGAATGCGCTGGTTCTTTTATTATTTCCCACAACACATAACCATGATGATGTCTGATTCTTaGTTCTCTGTGACTTGCGGC | + |
|
Preference number: 2 (lower is better) Translates to: QDEGMRWFFYYFPQHITMMMSDS*FSVTCG Trigger: GCCGCAAGTCACAGAGAACCAAGAATCAGACATCAT...CATGGTTATGTGTTGTGGGAAATAATAAAAGAACCAGCGCATTCCCTCGTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213371.2 ENSMUST00000215902.2 |
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| 3UTR-3UTR CCA 90 bp | GCGCTGGTTCTTTTATTATTTCCCACAACACATAACCATGTCCCCATCTTAAAAGAAATAATAAGCAAATaGTGCCAGAGCCCTGGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: ALVLLLFPTTHNHVPILKEIISK*CQSPGP Trigger: TGGGCCAGGGCTCTGGCACCATTTGCTTATTATTTC...TTTTAAGATGGGGACATGGTTATGTGTTGTGGGAAATAATAAAAGAACCAGCGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213371.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAACGATTTGCCTCATTTGATTGGATACATATGCAGGAGTGTTGTTAGTTTTGGTTTTTCACCCAGGTaGGTCTTCTTATGTCGAGTG | + |
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Preference number: 2 (lower is better) Translates to: CNDLPHLIGYICRSVVSFGFSPR*VFLCRV Trigger: CACTCGACATAAGAAGACTCACCTGGGTGAAAAACC...AAAACTAACAACACTCCTGCATATGTATCCAATCAAATGAGGCAAATCGTTGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000213371.2 ENSMUST00000215902.2 |
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| 3UTR-3UTR TCA 90 bp | CTTTATGTTGAAATATGCAACGATTTGCCTCATTTGATTGGATACATATGCAGGGCAGTGAGTTGTGACTaGTGGGAGAAAGCCTTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LYVEICNDLPHLIGYICRAVSCD*WEKAFL Trigger: CAAGAAGGCTTTCTCCCATCAGTCACAACTCACTGC...CCTGCATATGTATCCAATCAAATGAGGCAAATCGTTGCATATTTCAACATAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213371.2 ENSMUST00000215902.2 |
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| 3UTR-3UTR GCA 90 bp | GCGCTGGTTCTTTTATTATTTCCCACAACACATAACCATGTCCCCATCTTAAAATGGTTCTCTGTGACTTaGGGCACAAAGATTTTACGG | + |
|
Preference number: 2 (lower is better) Translates to: ALVLLLFPTTHNHVPILKWFSVT*GTKILR Trigger: CCGTAAAATCTTTGTGCCGCAAGTCACAGAGAACCA...TTTTAAGATGGGGACATGGTTATGTGTTGTGGGAAATAATAAAAGAACCAGCGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000213371.2 ENSMUST00000215902.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGCAATTGAGTTACCATTGTTTCTGAACTGCATTTGTGTTGCGTTTTCCTTCGGCTTCTCACCTGAATaGGTTCTTTCATGTGCATTG | + |
|
Preference number: 2 (lower is better) Translates to: SAIELPLFLNCICVAFSFGFSPE*VLSCAL Trigger: CAATGCACATGAAAGAACCCATTCAGGTGAGAAGCC...GAAGGAAAACGCAACACAAATGCAGTTCAGAAACAATGGTAACTCAATTGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215902.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGACGAGGGAATGCGCTGGTTCTTTTATTATTTCCCACAACACATAACCATGATTCCCATCATTGTATaGTGTCTGATTCTTGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: QDEGMRWFFYYFPQHITMIPIIV*CLILGS Trigger: AGAACCAAGAATCAGACATCATACAATGATGGGAAT...CATGGTTATGTGTTGTGGGAAATAATAAAAGAACCAGCGCATTCCCTCGTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213371.2 ENSMUST00000215902.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTGTCTCTCAGTTGCTCTTGTTCTCTTTTCACCAACAGTAAGAAAATTTAGACTGTTCTTTCATGAGTaGGTAAGAGACTTCGGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: QCLSVALVLFSPTVRKFRLFFHE*VRDFGQ Trigger: CTGACCGAAGTCTCTTACTCACTCATGAAAGAACAG...TCTAAATTTTCTTACTGTTGGTGAAAAGAGAACAAGAGCAACTGAGAGACACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213371.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTATACCGGTTACATGCTTTATGTTGAAATATGCAACGATTTGCCTCATTTGTTTTCTGATGAGACGTaGGGTCTGACTTCCAATAGT | + |
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Preference number: 2 (lower is better) Translates to: WYTGYMLYVEICNDLPHLFSDET*GLTSNS Trigger: ACTATTGGAAGTCAGACCTCACGTCTCATCAGAAAA...CAAATGAGGCAAATCGTTGCATATTTCAACATAAAGCATGTAACCGGTATACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213371.2 ENSMUST00000215902.2 |
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| 3UTR-3UTR TCA 90 bp | CTTTATGTTGAAATATGCAACGATTTGCCTCATTTGATTGGATACATATGCAGGTTTTCTGATGTGCTGTaGGTTGACACTTCCAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: LYVEICNDLPHLIGYICRFSDVL*VDTSSG Trigger: TCCACTGGAAGTGTCAACTCACAGCACATCAGAAAA...CCTGCATATGTATCCAATCAAATGAGGCAAATCGTTGCATATTTCAACATAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213371.2 ENSMUST00000215902.2 |
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| 3UTR-3UTR TCA 90 bp | GCGCTGGTTCTTTTATTATTTCCCACAACACATAACCATGTCCCCATCTTAAAAACGATTTGCCTCATTTaGTTGGATACATATGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: ALVLLLFPTTHNHVPILKTICLI*LDTYAG Trigger: TCCTGCATATGTATCCAATCAAATGAGGCAAATCGT...TTTTAAGATGGGGACATGGTTATGTGTTGTGGGAAATAATAAAAGAACCAGCGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000213371.2 ENSMUST00000215902.2 |
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| 3UTR-3UTR GCA 90 bp | TATGTTGAAATATGCAACGATTTGCCTCATTTGATTGGATACATATGCAGGAGTTGGTTCTCTGTGACTTaGGGCACAAAGATTTTACGG | + |
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Preference number: 2 (lower is better) Translates to: YVEICNDLPHLIGYICRSWFSVT*GTKILR Trigger: CCGTAAAATCTTTGTGCCGCAAGTCACAGAGAACCA...ACTCCTGCATATGTATCCAATCAAATGAGGCAAATCGTTGCATATTTCAACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000213371.2 ENSMUST00000215902.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTGTCTCTCAGTTGCTCTTGTTCTCTTTTCACCAACAGTAAGAAAATTTAGAATGAGACGTGAGGTCTaGCTTCCAATAGTACATTTT | + |
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Preference number: 2 (lower is better) Translates to: QCLSVALVLFSPTVRKFRMRREV*LPIVHF Trigger: AAAATGTACTATTGGAAGTCAGACCTCACGTCTCAT...TCTAAATTTTCTTACTGTTGGTGAAAAGAGAACAAGAGCAACTGAGAGACACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213371.2 ENSMUST00000215902.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTATGTTGAAATATGCAACGATTTGCCTCATTTGATTGGATACATATGCAGGAACCACAGCTCCCTTTaGAACTGTTCTTTCATGAGT | + |
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Preference number: 2 (lower is better) Translates to: LYVEICNDLPHLIGYICRNHSSL*NCSFMS Trigger: ACTCATGAAAGAACAGTTCCAAAGGGAGCTGTGGTT...CCTGCATATGTATCCAATCAAATGAGGCAAATCGTTGCATATTTCAACATAAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213371.2 |
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| 3UTR-3UTR TCA 90 bp | TATGTTGAAATATGCAACGATTTGCCTCATTTGATTGGATACATATGCAGGAGTATGAGACGTGAGGTCTaGCTTCCAATAGTACATTTT | + |
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Preference number: 2 (lower is better) Translates to: YVEICNDLPHLIGYICRSMRREV*LPIVHF Trigger: AAAATGTACTATTGGAAGTCAGACCTCACGTCTCAT...ACTCCTGCATATGTATCCAATCAAATGAGGCAAATCGTTGCATATTTCAACATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000213371.2 ENSMUST00000215902.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGCAATTGAGTTACCATTGTTTCTGAACTGCATTTGTGTTGCGTTTTCCTTCGGTATACCGGTTACATaGTTTATGTTGAAATATGCA | + |
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Preference number: 2 (lower is better) Translates to: SAIELPLFLNCICVAFSFGIPVT*FMLKYA Trigger: TGCATATTTCAACATAAAGCATGTAACCGGTATACC...GAAGGAAAACGCAACACAAATGCAGTTCAGAAACAATGGTAACTCAATTGCTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215902.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTATGTTGAAATATGCAACGATTTGCCTCATTTGATTGGATACATATGCAGGTTTGCCTCATTTGATTaGATACATATGCAGGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: LYVEICNDLPHLIGYICRFASFD*IHMQEC Trigger: ACACTCCTGCATATGTATCCAATCAAATGAGGCAAA...CCTGCATATGTATCCAATCAAATGAGGCAAATCGTTGCATATTTCAACATAAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213371.2 ENSMUST00000215618.2 ENSMUST00000215902.2 |
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| 3UTR-3UTR CCA 90 bp | TATGTTGAAATATGCAACGATTTGCCTCATTTGATTGGATACATATGCAGGAGTTTTGCCTCATTTGATTaGATACATATGCAGGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: YVEICNDLPHLIGYICRSFASFD*IHMQEC Trigger: ACACTCCTGCATATGTATCCAATCAAATGAGGCAAA...ACTCCTGCATATGTATCCAATCAAATGAGGCAAATCGTTGCATATTTCAACATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213371.2 ENSMUST00000215618.2 ENSMUST00000215902.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTATGTTGAAATATGCAACGATTTGCCTCATTTGATTGGATACATATGCAGGGGTATACCGGTTACATaGTTTATGTTGAAATATGCA | + |
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Preference number: 2 (lower is better) Translates to: LYVEICNDLPHLIGYICRGIPVT*FMLKYA Trigger: TGCATATTTCAACATAAAGCATGTAACCGGTATACC...CCTGCATATGTATCCAATCAAATGAGGCAAATCGTTGCATATTTCAACATAAAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000213371.2 ENSMUST00000215618.2 ENSMUST00000215902.2 |
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| 3UTR CCA 72 bp | GAGGTCCACTGCAAAGGTCTTGGGGGAGTTGAAGCATaGGGCTGGCGTAGTAACAGCCCACCCGTAGGAACT | + |
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Preference number: 3 (lower is better) Translates to: EVHCKGLGGVEA*GWRSNSPPVGT Trigger: AGTTCCTACGGGTGGGCTGTTACTACGCCAGCCCCATGCTTCAACTCCCCCAAGACCTTTGCAGTGGACCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215902.2 |
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| 3UTR GCA 72 bp | AGAGTGCATGGCCGGCCAGGCAACCAGAGCTTGAGTTaGCAGCACAAGACGAGGGAATGCGCTGGTTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: RVHGRPGNQSLS*QHKTRECAGSF Trigger: AAAAGAACCAGCGCATTCCCTCGTCTTGTGCTGGCAACTCAAGCTCTGGTTGCCTGGCCGGCCATGCACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215902.2 |
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| 3UTR GCA 72 bp | GTATGGCAGCAAAGTGTGGGTTTGCCTGAGGTCCACTaGAAAGGTCTTGGGGGAGTTGAAGCATGGGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: VWQQSVGLPEVH*KGLGGVEAWGW Trigger: CCAGCCCCATGCTTCAACTCCCCCAAGACCTTTGCAGTGGACCTCAGGCAAACCCACACTTTGCTGCCATAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215902.2 |
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| 3UTR GCA 72 bp | TCAGAGTACTCACGTTATGGACACCTGGGAGGCTCCTaGTTGAAGCTTCTGCTAGGCTCCATGGCCCAAATC | + |
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Preference number: 3 (lower is better) Translates to: SEYSRYGHLGGS*LKLLLGSMAQI Trigger: GATTTGGGCCATGGAGCCTAGCAGAAGCTTCAAGCAGGAGCCTCCCAGGTGTCCATAACGTGAGTACTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213371.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGGCTCCTGCTTGAAGCTTCTGCTAGGCTCCATGGCCCAAATCCACGCTCCAAAACCACAGCTCCCTTaGGAACTGTTCTTTCATGAG | + |
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Preference number: 3 (lower is better) Translates to: GGSCLKLLLGSMAQIHAPKPQLP*ELFFHE Trigger: CTCATGAAAGAACAGTTCCAAAGGGAGCTGTGGTTT...TGGAGCGTGGATTTGGGCCATGGAGCCTAGCAGAAGCTTCAAGCAGGAGCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213371.2 |
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| 3UTR CCA 72 bp | TCTGGGTTCAAGAGAGAAAGGTATGGCAGCAAAGTGTaGGTTTGCCTGAGGTCCACTGCAAAGGTCTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: SGFKRERYGSKV*VCLRSTAKVLG Trigger: CCCCAAGACCTTTGCAGTGGACCTCAGGCAAACCCACACTTTGCTGCCATACCTTTCTCTCTTGAACCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215902.2 |
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| 3UTR-3UTR CAA 90 bp | CGAGGGAATGCGCTGGTTCTTTTATTATTTCCCACAACACATAACCATGTCCCCCCCAGTGTCTCTCAGTaGCTCTTGTTCTCTTTTCAC | + |
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Preference number: 3 (lower is better) Translates to: RGNALVLLLFPTTHNHVPPSVSQ*LLFSFH Trigger: GTGAAAAGAGAACAAGAGCAACTGAGAGACACTGGG...GGGGACATGGTTATGTGTTGTGGGAAATAATAAAAGAACCAGCGCATTCCCTCG 47% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000213371.2 ENSMUST00000215902.2 |
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| 3UTR TCA 72 bp | CAGGAAACCACAGCTCCCTTTGGAACTGTTCTTTCATaGGTGAGTAAGAGACTTCGGTCAGGACGAATCTAC | + |
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Preference number: 3 (lower is better) Translates to: QETTAPFGTVLS*VSKRLRSGRIY Trigger: GTAGATTCGTCCTGACCGAAGTCTCTTACTCACTCATGAAAGAACAGTTCCAAAGGGAGCTGTGGTTTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213371.2 |
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| 3UTR CCA 72 bp | CTGAACTGCATTTGTGTTGCGTTTTCCTTCGTGTGGTaGCTTATCTGGGTTCAAGAGAGAAAGGTATGGCAG | + |
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Preference number: 3 (lower is better) Translates to: LNCICVAFSFVW*LIWVQERKVWQ Trigger: CTGCCATACCTTTCTCTCTTGAACCCAGATAAGCCACCACACGAAGGAAAACGCAACACAAATGCAGTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215902.2 |
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| 3UTR-3UTR CAA 90 bp | CGAGGGAATGCGCTGGTTCTTTTATTATTTCCCACAACACATAACCATGTCCCCAAGATCAACTTAGGTTaGGCAATGCAGGGGTCTGTA | + |
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Preference number: 3 (lower is better) Translates to: RGNALVLLLFPTTHNHVPKINLG*AMQGSV Trigger: TACAGACCCCTGCATTGCCAAACCTAAGTTGATCTT...GGGGACATGGTTATGTGTTGTGGGAAATAATAAAAGAACCAGCGCATTCCCTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000213371.2 |
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| 3UTR TCA 72 bp | AAACCACAGCTCCCTTTGGAACTGTTCTTTCATGAGTaGGTAAGAGACTTCGGTCAGGACGAATCTACATTC | + |
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Preference number: 3 (lower is better) Translates to: KPQLPLELFFHE*VRDFGQDESTF Trigger: GAATGTAGATTCGTCCTGACCGAAGTCTCTTACTCACTCATGAAAGAACAGTTCCAAAGGGAGCTGTGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213371.2 |
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| 3UTR GCA 72 bp | CATTGTATGATGTCTGATTCTTGGTTCTCTGTGACTTaGGGCACAAAGATTTTACGGGGGCTCTTCTATGAC | + |
|
Preference number: 3 (lower is better) Translates to: HCMMSDSWFSVT*GTKILRGLFYD Trigger: GTCATAGAAGAGCCCCCGTAAAATCTTTGTGCCGCAAGTCACAGAGAACCAAGAATCAGACATCATACAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213371.2 |
||
| 3UTR CCA 72 bp | TTTCTGAACTGCATTTGTGTTGCGTTTTCCTTCGTGTaGTGGCTTATCTGGGTTCAAGAGAGAAAGGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: FLNCICVAFSFV*WLIWVQERKVW Trigger: CCATACCTTTCTCTCTTGAACCCAGATAAGCCACCACACGAAGGAAAACGCAACACAAATGCAGTTCAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215902.2 |
||
| 3UTR TCA 72 bp | CCCCATACTGACCTGTGTGTCTTTTCTGATGTGCTGTaGGTTGACACTTCCAGTGGAATGATTTATTGCATT | + |
|
Preference number: 3 (lower is better) Translates to: PHTDLCVFSDVL*VDTSSGMIYCI Trigger: AATGCAATAAATCATTCCACTGGAAGTGTCAACTCACAGCACATCAGAAAAGACACACAGGTCAGTATGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000213371.2 ENSMUST00000215902.2 |
||
| 3UTR GCA 72 bp | GCTCGTCCTGTGGGATTGTGTGGTATACCGGTTACATaGTTTATGTTGAAATATGCAACGATTTGCCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: ARPVGLCGIPVT*FMLKYATICLI Trigger: AATGAGGCAAATCGTTGCATATTTCAACATAAAGCATGTAACCGGTATACCACACAATCCCACAGGACGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213371.2 ENSMUST00000215618.2 ENSMUST00000215902.2 |
||
| 3UTR GCA 72 bp | TTGTGCTCAGCAATTGAGTTACCATTGTTTCTGAACTaGATTTGTGTTGCGTTTTCCTTCGTGTGGTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LCSAIELPLFLN*ICVAFSFVWWL Trigger: AAGCCACCACACGAAGGAAAACGCAACACAAATGCAGTTCAGAAACAATGGTAACTCAATTGCTGAGCACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215902.2 |
||
| 3UTR-3UTR CAA 90 bp | TATGTTGAAATATGCAACGATTTGCCTCATTTGATTGGATACATATGCAGGAGTGCTCGTCCTGTGGGATaGTGTGGTATACCGGTTACA | + |
|
Preference number: 3 (lower is better) Translates to: YVEICNDLPHLIGYICRSARPVG*CGIPVT Trigger: TGTAACCGGTATACCACACAATCCCACAGGACGAGC...ACTCCTGCATATGTATCCAATCAAATGAGGCAAATCGTTGCATATTTCAACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213371.2 ENSMUST00000215618.2 ENSMUST00000215902.2 |
||
| 3UTR TCA 72 bp | AGTTGTTGTGCTCAGCAATTGAGTTACCATTGTTTCTaGACTGCATTTGTGTTGCGTTTTCCTTCGTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SCCAQQLSYHCF*TAFVLRFPSCG Trigger: ACCACACGAAGGAAAACGCAACACAAATGCAGTTCAGAAACAATGGTAACTCAATTGCTGAGCACAACAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215902.2 |
||
| 3UTR CCA 72 bp | AGTTCTGCTTCAATCGTGTCTTCACTTGGTGTCTTTTaGTTAGTTTTTCTGAGTTGCCGCAAACGTGTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: SSASIVSSLGVF*LVFLSCRKRVL Trigger: TAAGACACGTTTGCGGCAACTCAGAAAAACTAACCAAAAGACACCAAGTGAAGACACGATTGAAGCAGAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000213371.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCAACGATTTGCCTCATTTGATTGGATACATATGCAGGAGTGTTGTTAGTTTTTTCTATGACGGGATGTaGTCCCTTTGGAGACTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CNDLPHLIGYICRSVVSFFYDGM*SLWRLP Trigger: AGGAAGTCTCCAAAGGGACAACATCCCGTCATAGAA...AAAACTAACAACACTCCTGCATATGTATCCAATCAAATGAGGCAAATCGTTGCA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000213371.2 |
||
| 3UTR TCA 72 bp | TGGGATTGTGTGGTATACCGGTTACATGCTTTATGTTaGAATATGCAACGATTTGCCTCATTTGATTGGATA | + |
|
Preference number: 3 (lower is better) Translates to: WDCVVYRLHALC*NMQRFASFDWI Trigger: TATCCAATCAAATGAGGCAAATCGTTGCATATTTCAACATAAAGCATGTAACCGGTATACCACACAATCCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213371.2 ENSMUST00000215618.2 ENSMUST00000215902.2 |
||
| 3UTR GCA 72 bp | GTGTGGTATACCGGTTACATGCTTTATGTTGAAATATaGAACGATTTGCCTCATTTGATTGGATACATATGC | + |
|
Preference number: 3 (lower is better) Translates to: VWYTGYMLYVEI*NDLPHLIGYIC Trigger: GCATATGTATCCAATCAAATGAGGCAAATCGTTGCATATTTCAACATAAAGCATGTAACCGGTATACCACAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213371.2 ENSMUST00000215618.2 ENSMUST00000215902.2 |
||
| 3UTR TCA 72 bp | TTACAAGTTAGGATTTTAGTTGTTGTGCTCAGCAATTaGGTTACCATTGTTTCTGAACTGCATTTGTGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LQVRILVVVLSN*VTIVSELHLCC Trigger: GCAACACAAATGCAGTTCAGAAACAATGGTAACTCAATTGCTGAGCACAACAACTAAAATCCTAACTTGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215902.2 |
||
| 3UTR CAA 72 bp | TGCCCTAGAGTGCATGGCCGGCCAGGCAACCAGAGCTaGAGTTGCCAGCACAAGACGAGGGAATGCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CPRVHGRPGNQS*SCQHKTRECAG Trigger: ACCAGCGCATTCCCTCGTCTTGTGCTGGCAACTCAAGCTCTGGTTGCCTGGCCGGCCATGCACTCTAGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215902.2 |
||
| 3UTR CAA 72 bp | AAAGTGTGGGTTTGCCTGAGGTCCACTGCAAAGGTCTaGGGGGAGTTGAAGCATGGGGCTGGCGTAGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: KVWVCLRSTAKV*GELKHGAGVVT Trigger: TGTTACTACGCCAGCCCCATGCTTCAACTCCCCCAAGACCTTTGCAGTGGACCTCAGGCAAACCCACACTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215902.2 |
||
| CDS-3UTR GCA 90 bp | TCATTCAATGATGATGATCCACATAAAGGCAGAGAACACACTGGGGATAGTTCCGCAGCGTCCAGGTCCTaGCACTCCTCCAAGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFNDDDPHKGREHTGDSSAASRS*HSSKVK Trigger: CTTCACCTTGGAGGAGTGGCAGGACCTGGACGCTGC...GGAACTATCCCCAGTGTGTTCTCTGCCTTTATGTGGATCATCATCATTGAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
||
| 3UTR CAA 72 bp | TCTGCTAGGCTCCATGGCCCAAATCCACGCTCCAAATaGAAGATCAACTTAGGTTTGGCAATGCAGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SARLHGPNPRSK*KINLGLAMQGS Trigger: AGACCCCTGCATTGCCAAACCTAAGTTGATCTTCAATTTGGAGCGTGGATTTGGGCCATGGAGCCTAGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000213371.2 |
||
| CDS-3UTR GCA 90 bp | AATGATGATGATCCACATAAAGGCAGAGAACACACTGGGGATAGTTCCAGTCTTCACCTGGGAGGCTCCTaGTTGAAGCTTCTGCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NDDDPHKGREHTGDSSSLHLGGS*LKLLLG Trigger: GCCTAGCAGAAGCTTCAAGCAGGAGCCTCCCAGGTG...AAGACTGGAACTATCCCCAGTGTGTTCTCTGCCTTTATGTGGATCATCATCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
||
| CDS-3UTR TCA 90 bp | AAATGGAGTGTTTATTTAGCCTTACGGTTCAGAGGGTTAGAGTCCAGGACGGCAGGTTTTTCACCCAGGTaGGTCTTCTTATGTCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KWSVYLALRFRGLESRTAGFSPR*VFLCRV Trigger: CACTCGACATAAGAAGACTCACCTGGGTGAAAAACC...TGCCGTCCTGGACTCTAACCCTCTGAACCGTAAGGCTAAATAAACACTCCATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
||
| CDS-3UTR GCA 90 bp | TGGTATACCGGTTACATGCTTTATGTTGAAATATGCAACGATTTGCCTCATTTGGCAGCGTCCAGGTCCTaGCACTCCTCCAAGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WYTGYMLYVEICNDLPHLAASRS*HSSKVK Trigger: CTTCACCTTGGAGGAGTGGCAGGACCTGGACGCTGC...CAAATGAGGCAAATCGTTGCATATTTCAACATAAAGCATGTAACCGGTATACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213371.2 ENSMUST00000215618.2 ENSMUST00000215902.2 |
||
| CDS-3UTR GCA 90 bp | GAAATATGCAACGATTTGCCTCATTTGATTGGATACATATGCAGGAGTGTTGTTGCAGCGTCCAGGTCCTaGCACTCCTCCAAGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EICNDLPHLIGYICRSVVAASRS*HSSKVK Trigger: CTTCACCTTGGAGGAGTGGCAGGACCTGGACGCTGC...AACAACACTCCTGCATATGTATCCAATCAAATGAGGCAAATCGTTGCATATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213371.2 ENSMUST00000215618.2 ENSMUST00000215902.2 |
||
| CDS-3UTR GCA 90 bp | AGCATGGTAGCAGCAACAGGTTCATTCAATGATGATGATCCACATAAAGGCAGACCAGGAACACCAGGCTaGTGTAGGTTTCCAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SMVAATGSFNDDDPHKGRPGTPG*CRFPAS Trigger: TGATGCTGGAAACCTACAGCAGCCTGGTGTTCCTGG...TCTGCCTTTATGTGGATCATCATCATTGAATGAACCTGTTGCTGCTACCATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
||
| CDS-3UTR CCA 90 bp | AAATGGAGTGTTTATTTAGCCTTACGGTTCAGAGGGTTAGAGTCCAGGACGGCATGCCCAAGTCCATGTTaGTCTATGAGGACCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KWSVYLALRFRGLESRTACPSPC*SMRTIL Trigger: GAGAATGGTCCTCATAGACCAACATGGACTTGGGCA...TGCCGTCCTGGACTCTAACCCTCTGAACCGTAAGGCTAAATAAACACTCCATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
||
| CDS-3UTR TCA 90 bp | ATGATGATCCACATAAAGGCAGAGAACACACTGGGGATAGTTCCAGTCTTTGAAGCAGTGAGTTGTGACTaGTGGGAGAAAGCCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MMIHIKAENTLGIVPVFEAVSCD*WEKAFL Trigger: CAAGAAGGCTTTCTCCCATCAGTCACAACTCACTGC...TTCAAAGACTGGAACTATCCCCAGTGTGTTCTCTGCCTTTATGTGGATCATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
||
| CDS-3UTR GCA 90 bp | TATGTTGAAATATGCAACGATTTGCCTCATTTGATTGGATACATATGCAGGAGTGCAGCGTCCAGGTCCTaGCACTCCTCCAAGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YVEICNDLPHLIGYICRSAASRS*HSSKVK Trigger: CTTCACCTTGGAGGAGTGGCAGGACCTGGACGCTGC...ACTCCTGCATATGTATCCAATCAAATGAGGCAAATCGTTGCATATTTCAACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000213371.2 ENSMUST00000215618.2 ENSMUST00000215902.2 |
||
| CDS-3UTR TCA 90 bp | AATGATGATGATCCACATAAAGGCAGAGAACACACTGGGGATAGTTCCAGTCTTATGTGCAGTGAGTTGTaGCTGATGGGAGAAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NDDDPHKGREHTGDSSSLMCSEL*LMGESL Trigger: AAGGCTTTCTCCCATCAGTCACAACTCACTGCACAT...AAGACTGGAACTATCCCCAGTGTGTTCTCTGCCTTTATGTGGATCATCATCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
||
| CDS-3UTR GCA 90 bp | TATGTTGAAATATGCAACGATTTGCCTCATTTGATTGGATACATATGCAGGAGTCACCTGGGAGGCTCCTaGTTGAAGCTTCTGCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YVEICNDLPHLIGYICRSHLGGS*LKLLLG Trigger: GCCTAGCAGAAGCTTCAAGCAGGAGCCTCCCAGGTG...ACTCCTGCATATGTATCCAATCAAATGAGGCAAATCGTTGCATATTTCAACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215618.2 |
||
| CDS-3UTR TCA 90 bp | AAATGGAGTGTTTATTTAGCCTTACGGTTCAGAGGGTTAGAGTCCAGGACGGCAATGAGACGTGAGGTCTaGCTTCCAATAGTACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: KWSVYLALRFRGLESRTAMRREV*LPIVHF Trigger: AAAATGTACTATTGGAAGTCAGACCTCACGTCTCAT...TGCCGTCCTGGACTCTAACCCTCTGAACCGTAAGGCTAAATAAACACTCCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
||
| CDS-3UTR TCA 90 bp | CAACAGGTTCATTCAATGATGATGATCCACATAAAGGCAGAGAACACACTGGGGTTTTCTGATGAGACGTaGGGTCTGACTTCCAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: QQVHSMMMIHIKAENTLGFSDET*GLTSNS Trigger: ACTATTGGAAGTCAGACCTCACGTCTCATCAGAAAA...CCCCAGTGTGTTCTCTGCCTTTATGTGGATCATCATCATTGAATGAACCTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
||
| CDS-3UTR TCA 90 bp | ATGATGATCCACATAAAGGCAGAGAACACACTGGGGATAGTTCCAGTCTTTGAATTTTCTGATGTGCTGTaGGTTGACACTTCCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MMIHIKAENTLGIVPVFEFSDVL*VDTSSG Trigger: TCCACTGGAAGTGTCAACTCACAGCACATCAGAAAA...TTCAAAGACTGGAACTATCCCCAGTGTGTTCTCTGCCTTTATGTGGATCATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
||
| CDS-3UTR GCA 90 bp | CAAAGCATGGTAGCAGCAACAGGTTCATTCAATGATGATGATCCACATAAAGGCTGGTTCTCTGTGACTTaGGGCACAAAGATTTTACGG | + |
|
Preference number: 4 (lower is better) Translates to: QSMVAATGSFNDDDPHKGWFSVT*GTKILR Trigger: CCGTAAAATCTTTGTGCCGCAAGTCACAGAGAACCA...GCCTTTATGTGGATCATCATCATTGAATGAACCTGTTGCTGCTACCATGCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
||
| CDS-3UTR CCA 90 bp | ATGATGATCCACATAAAGGCAGAGAACACACTGGGGATAGTTCCAGTCTTTGAAATGATGTCTGATTCTTaGTTCTCTGTGACTTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: MMIHIKAENTLGIVPVFEMMSDS*FSVTCG Trigger: GCCGCAAGTCACAGAGAACCAAGAATCAGACATCAT...TTCAAAGACTGGAACTATCCCCAGTGTGTTCTCTGCCTTTATGTGGATCATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
||
| CDS-3UTR CCA 90 bp | TCATTCAATGATGATGATCCACATAAAGGCAGAGAACACACTGGGGATAGTTCCGGCTTCTCACCTGAATaGGTTCTTTCATGTGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SFNDDDPHKGREHTGDSSGFSPE*VLSCAL Trigger: CAATGCACATGAAAGAACCCATTCAGGTGAGAAGCC...GGAACTATCCCCAGTGTGTTCTCTGCCTTTATGTGGATCATCATCATTGAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
||
| CDS-3UTR TCA 90 bp | AAATGGAGTGTTTATTTAGCCTTACGGTTCAGAGGGTTAGAGTCCAGGACGGCAATTCCCATCATTGTATaGTGTCTGATTCTTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KWSVYLALRFRGLESRTAIPIIV*CLILGS Trigger: AGAACCAAGAATCAGACATCATACAATGATGGGAAT...TGCCGTCCTGGACTCTAACCCTCTGAACCGTAAGGCTAAATAAACACTCCATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
||
| CDS-3UTR TCA 90 bp | GAAATATGCAACGATTTGCCTCATTTGATTGGATACATATGCAGGAGTGTTGTTGCAGTGAGTTGTGACTaGTGGGAGAAAGCCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EICNDLPHLIGYICRSVVAVSCD*WEKAFL Trigger: CAAGAAGGCTTTCTCCCATCAGTCACAACTCACTGC...AACAACACTCCTGCATATGTATCCAATCAAATGAGGCAAATCGTTGCATATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215618.2 |
||
| CDS-3UTR GCA 90 bp | AATGATGATGATCCACATAAAGGCAGAGAACACACTGGGGATAGTTCCAGTCTTCATTCTCACTCAAATTaGCAGTCCAGTCAGATACTG | + |
|
Preference number: 4 (lower is better) Translates to: NDDDPHKGREHTGDSSSLHSHSN*QSSQIL Trigger: CAGTATCTGACTGGACTGGCAATTTGAGTGAGAATG...AAGACTGGAACTATCCCCAGTGTGTTCTCTGCCTTTATGTGGATCATCATCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
||
| CDS-3UTR TCA 90 bp | GAAATATGCAACGATTTGCCTCATTTGATTGGATACATATGCAGGAGTGTTGTTGGTTTTTCACCCAGGTaGGTCTTCTTATGTCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EICNDLPHLIGYICRSVVGFSPR*VFLCRV Trigger: CACTCGACATAAGAAGACTCACCTGGGTGAAAAACC...AACAACACTCCTGCATATGTATCCAATCAAATGAGGCAAATCGTTGCATATTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215618.2 |
||
| CDS-3UTR TCA 90 bp | GAAATATGCAACGATTTGCCTCATTTGATTGGATACATATGCAGGAGTGTTGTTATGTGCAGTGAGTTGTaGCTGATGGGAGAAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EICNDLPHLIGYICRSVVMCSEL*LMGESL Trigger: AAGGCTTTCTCCCATCAGTCACAACTCACTGCACAT...AACAACACTCCTGCATATGTATCCAATCAAATGAGGCAAATCGTTGCATATTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215618.2 |
||
| CDS-3UTR CCA 90 bp | CAACAGGTTCATTCAATGATGATGATCCACATAAAGGCAGAGAACACACTGGGGTCACTTGGTGTCTTTTaGTTAGTTTTTCTGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QQVHSMMMIHIKAENTLGSLGVF*LVFLSC Trigger: GCAACTCAGAAAAACTAACCAAAAGACACCAAGTGA...CCCCAGTGTGTTCTCTGCCTTTATGTGGATCATCATCATTGAATGAACCTGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
||
| CDS-3UTR TCA 90 bp | TGGTATACCGGTTACATGCTTTATGTTGAAATATGCAACGATTTGCCTCATTTGTTTTCTGATGTGCTGTaGGTTGACACTTCCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WYTGYMLYVEICNDLPHLFSDVL*VDTSSG Trigger: TCCACTGGAAGTGTCAACTCACAGCACATCAGAAAA...CAAATGAGGCAAATCGTTGCATATTTCAACATAAAGCATGTAACCGGTATACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215618.2 |
||
| CDS-3UTR CCA 90 bp | ACCGGTTACATGCTTTATGTTGAAATATGCAACGATTTGCCTCATTTGATTGGAGGCTTCTCACCTGAATaGGTTCTTTCATGTGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: TGYMLYVEICNDLPHLIGGFSPE*VLSCAL Trigger: CAATGCACATGAAAGAACCCATTCAGGTGAGAAGCC...TCCAATCAAATGAGGCAAATCGTTGCATATTTCAACATAAAGCATGTAACCGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215618.2 |
||
| CDS-3UTR GCA 90 bp | CTTTATGTTGAAATATGCAACGATTTGCCTCATTTGATTGGATACATATGCAGGTGGTTCTCTGTGACTTaGGGCACAAAGATTTTACGG | + |
|
Preference number: 4 (lower is better) Translates to: LYVEICNDLPHLIGYICRWFSVT*GTKILR Trigger: CCGTAAAATCTTTGTGCCGCAAGTCACAGAGAACCA...CCTGCATATGTATCCAATCAAATGAGGCAAATCGTTGCATATTTCAACATAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215618.2 |
||
| CDS-3UTR CCA 90 bp | ATGATGATCCACATAAAGGCAGAGAACACACTGGGGATAGTTCCAGTCTTTGAAAATCGTGTCTTCACTTaGTGTCTTTTGGTTAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MMIHIKAENTLGIVPVFENRVFT*CLLVSF Trigger: AAAACTAACCAAAAGACACCAAGTGAAGACACGATT...TTCAAAGACTGGAACTATCCCCAGTGTGTTCTCTGCCTTTATGTGGATCATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
||
| CDS-3UTR TCA 90 bp | GAAATATGCAACGATTTGCCTCATTTGATTGGATACATATGCAGGAGTGTTGTTATTCCCATCATTGTATaGTGTCTGATTCTTGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EICNDLPHLIGYICRSVVIPIIV*CLILGS Trigger: AGAACCAAGAATCAGACATCATACAATGATGGGAAT...AACAACACTCCTGCATATGTATCCAATCAAATGAGGCAAATCGTTGCATATTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215618.2 |
||
| CDS-3UTR CCA 90 bp | CTTTATGTTGAAATATGCAACGATTTGCCTCATTTGATTGGATACATATGCAGGTCACTTGGTGTCTTTTaGTTAGTTTTTCTGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LYVEICNDLPHLIGYICRSLGVF*LVFLSC Trigger: GCAACTCAGAAAAACTAACCAAAAGACACCAAGTGA...CCTGCATATGTATCCAATCAAATGAGGCAAATCGTTGCATATTTCAACATAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215618.2 |
||
| CDS-3UTR CCA 90 bp | ACCGGTTACATGCTTTATGTTGAAATATGCAACGATTTGCCTCATTTGATTGGAAATCGTGTCTTCACTTaGTGTCTTTTGGTTAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TGYMLYVEICNDLPHLIGNRVFT*CLLVSF Trigger: AAAACTAACCAAAAGACACCAAGTGAAGACACGATT...TCCAATCAAATGAGGCAAATCGTTGCATATTTCAACATAAAGCATGTAACCGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215618.2 |
||
| CDS-3UTR CAA 90 bp | TCATTCAATGATGATGATCCACATAAAGGCAGAGAACACACTGGGGATAGTTCCCTGGGAGGCTCCTGCTaGAAGCTTCTGCTAGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: SFNDDDPHKGREHTGDSSLGGSC*KLLLGS Trigger: GGAGCCTAGCAGAAGCTTCAAGCAGGAGCCTCCCAG...GGAACTATCCCCAGTGTGTTCTCTGCCTTTATGTGGATCATCATCATTGAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
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| CDS-3UTR CAA 90 bp | AGCATGGTAGCAGCAACAGGTTCATTCAATGATGATGATCCACATAAAGGCAGACGGGATGTTGTCCCTTaGGAGACTTCCTGTCGAGCC | + |
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Preference number: 5 (lower is better) Translates to: SMVAATGSFNDDDPHKGRRDVVP*ETSCRA Trigger: GGCTCGACAGGAAGTCTCCAAAGGGACAACATCCCG...TCTGCCTTTATGTGGATCATCATCATTGAATGAACCTGTTGCTGCTACCATGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
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| CDS CCA 90 bp | CCACGCCTTCACAAAGTCCATAATGCCATATGCCCAAGTCCATGTTaGTCTATGAGGACCATTCTCACTCAAATTGCCAGTCCAGTCAGA | + |
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Preference number: 5 (lower is better) Translates to: PRLHKVHNAICPSPC*SMRTILTQIASPVR Trigger: TCTGACTGGACTGGCAATTTGAGTGAGAATGGTCCTCATAGACCAACATGGACTTGGGCATATGGCATTATGGACTTTGTGAAGGCGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
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| CDS-3UTR CAA 90 bp | TGGTATACCGGTTACATGCTTTATGTTGAAATATGCAACGATTTGCCTCATTTGCTGGGAGGCTCCTGCTaGAAGCTTCTGCTAGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: WYTGYMLYVEICNDLPHLLGGSC*KLLLGS Trigger: GGAGCCTAGCAGAAGCTTCAAGCAGGAGCCTCCCAG...CAAATGAGGCAAATCGTTGCATATTTCAACATAAAGCATGTAACCGGTATACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215618.2 |
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| CDS-3UTR CAA 90 bp | TCATTCAATGATGATGATCCACATAAAGGCAGAGAACACACTGGGGATAGTTCCTTCTATGACGGGATGTaGTCCCTTTGGAGACTTCCT | + |
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Preference number: 5 (lower is better) Translates to: SFNDDDPHKGREHTGDSSFYDGM*SLWRLP Trigger: AGGAAGTCTCCAAAGGGACAACATCCCGTCATAGAA...GGAACTATCCCCAGTGTGTTCTCTGCCTTTATGTGGATCATCATCATTGAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
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| CDS TCA 90 bp | TATGAGGACCATTCTCACTCAAATTGCCAGTCCAGTCAGATACTGTaGTCTGTTGGAAAACTACCTCTTGAAAGTACGTTACCCCTGTGT | + |
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Preference number: 5 (lower is better) Translates to: YEDHSHSNCQSSQIL*SVGKLPLESTLPLC Trigger: ACACAGGGGTAACGTACTTTCAAGAGGTAGTTTTCCAACAGATCACAGTATCTGACTGGACTGGCAATTTGAGTGAGAATGGTCCTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
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| CDS-3UTR CAA 90 bp | AAATGGAGTGTTTATTTAGCCTTACGGTTCAGAGGGTTAGAGTCCAGGACGGCATTCACTTGGTGTCTTTaGGTTAGTTTTTCTGAGTTG | + |
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Preference number: 5 (lower is better) Translates to: KWSVYLALRFRGLESRTAFTWCL*VSFSEL Trigger: CAACTCAGAAAAACTAACCAAAAGACACCAAGTGAA...TGCCGTCCTGGACTCTAACCCTCTGAACCGTAAGGCTAAATAAACACTCCATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
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| CDS-3UTR CAA 90 bp | AAATGGAGTGTTTATTTAGCCTTACGGTTCAGAGGGTTAGAGTCCAGGACGGCAAGATACTGTGATCTGTaGGAAAACTACCTCTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: KWSVYLALRFRGLESRTARYCDL*ENYLLK Trigger: TTTCAAGAGGTAGTTTTCCAACAGATCACAGTATCT...TGCCGTCCTGGACTCTAACCCTCTGAACCGTAAGGCTAAATAAACACTCCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
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| CDS-3UTR CAA 90 bp | TGGTATACCGGTTACATGCTTTATGTTGAAATATGCAACGATTTGCCTCATTTGTTCTATGACGGGATGTaGTCCCTTTGGAGACTTCCT | + |
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Preference number: 5 (lower is better) Translates to: WYTGYMLYVEICNDLPHLFYDGM*SLWRLP Trigger: AGGAAGTCTCCAAAGGGACAACATCCCGTCATAGAA...CAAATGAGGCAAATCGTTGCATATTTCAACATAAAGCATGTAACCGGTATACCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215618.2 |
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| CDS-3UTR CAA 90 bp | TGCAACGATTTGCCTCATTTGATTGGATACATATGCAGGAGTGTTGTTAGTTTTTTCACTTGGTGTCTTTaGGTTAGTTTTTCTGAGTTG | + |
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Preference number: 5 (lower is better) Translates to: CNDLPHLIGYICRSVVSFFTWCL*VSFSEL Trigger: CAACTCAGAAAAACTAACCAAAAGACACCAAGTGAA...AAAACTAACAACACTCCTGCATATGTATCCAATCAAATGAGGCAAATCGTTGCA 37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000215618.2 |
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| CDS CAA 72 bp | TCTGCTAGGCTCCATGGCCCAAATCCACGCTCCAAATaGAAGATCAACTTAGGTTTGGCAATGCAGGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SARLHGPNPRSK*KINLGLAMQGS Trigger: GGACCCCTGCATTGCCAAACCTAAGTTGATCTTCAATTTGGAGCGTGGATTTGGGCCATGGAGCCTAGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072465.9 ENSMUST00000215618.2 |
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| CDS TCA 72 bp | TCCATAATGCCATATGCCCAAGTCCATGTTGGTCTATaGGGACCATTCTCACTCAAATTGCCAGTCCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: SIMPYAQVHVGL*GPFSLKLPVQS Trigger: TGACTGGACTGGCAATTTGAGTGAGAATGGTCCTCATAGACCAACATGGACTTGGGCATATGGCATTATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
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| CDS CCA 72 bp | CACAAAGTCCATAATGCCATATGCCCAAGTCCATGTTaGTCTATGAGGACCATTCTCACTCAAATTGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: HKVHNAICPSPC*SMRTILTQIAS Trigger: ACTGGCAATTTGAGTGAGAATGGTCCTCATAGACCAACATGGACTTGGGCATATGGCATTATGGACTTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
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| CDS TCA 72 bp | CATTCTCACTCAAATTGCCAGTCCAGTCAGATACTGTaGTCTGTTGGAAAACTACCTCTTGAAAGTACGTTA | + |
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Preference number: 6 (lower is better) Translates to: HSHSNCQSSQIL*SVGKLPLESTL Trigger: TAACGTACTTTCAAGAGGTAGTTTTCCAACAGATCACAGTATCTGACTGGACTGGCAATTTGAGTGAGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072465.9 |
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