Pregenerated sensors for ZFP800 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039841Ensembl transcript IDs: ENSMUST00000035930.11, ENSMUST00000115320.8, ENSMUST00000115321.9, ENSMUST00000123098.8, ENSMUST00000155494.2
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTaGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTTT | + |
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Preference number: 1 (lower is better) Translates to: RSMETIYDITATRKC*NGHCLRNWLDGYCF Trigger: AAAACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
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| 3UTR-3UTR TCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTCCTCATAGTACCATGTaGAGACGTTTAGTGGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCPHSTM*RRLVVL Trigger: TAGAACCACTAAACGTCTTCACATGGTACTATGAGG...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
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| 3UTR-3UTR TCA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATCCTCATAGTACCATGTaGAGACGTTTAGTGGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: SRSMETIYDITATRKCWNPHSTM*RRLVVL Trigger: TAGAACCACTAAACGTCTTCACATGGTACTATGAGG...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
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| 3UTR-3UTR TCA 90 bp | ATTCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGACCTCATAGTACCATGTaGAGACGTTTAGTGGTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: IQGLWRQYMILQRLESAGPHSTM*RRLVVL Trigger: TAGAACCACTAAACGTCTTCACATGGTACTATGAGG...TCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
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| 3UTR TCA 72 bp | GTAGGCCATATATTCAAGGTCTATGGAGACAATATATaGTATTACAGCGACTCGAAAGTGCTGGAATGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VGHIFKVYGDNI*YYSDSKVLEWA Trigger: TGCCCATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGAATATATGGCCTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
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| CDS-3UTR TCA 90 bp | TATGATATTACAGCGACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGCTCCAAGTCAGCCTGTaGTTCCTGAGGTTGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YDITATRKCWNGHCLRNWLQVSL*FLRLLL Trigger: GAGGAGCAACCTCAGGAATCACAGGCTGACTTGGAG...CCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGTCGCTGTAATATCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
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| CDS-3UTR TCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTCTCCAAGTCAGCCTGTaGTTCCTGAGGTTGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCLQVSL*FLRLLL Trigger: GAGGAGCAACCTCAGGAATCACAGGCTGACTTGGAG...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
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| CDS-3UTR TCA 90 bp | TATGATATTACAGCGACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGAGCCGAAGGGCTAGCTaGTTTAGGGCTTTCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: YDITATRKCWNGHCLRNWSRRAS*FRAFRV Trigger: GACTCTGAAAGCCCTAAATCAGCTAGCCCTTCGGCT...CCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGTCGCTGTAATATCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
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| CDS-3UTR CCA 90 bp | TATGATATTACAGCGACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGGAGGTTGCTCCTCAGTaGGAGCTGCAGCTTCATCTA | + |
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Preference number: 4 (lower is better) Translates to: YDITATRKCWNGHCLRNWEVAPQ*ELQLHL Trigger: TAGATGAAGCTGCAGCTCCCACTGAGGAGCAACCTC...CCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGTCGCTGTAATATCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
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| CDS-3UTR TCA 90 bp | TATGATATTACAGCGACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGGGTAATGGAAGGGGGTaGAGACTCTACAGAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YDITATRKCWNGHCLRNWGNGRG*RLYRIC Trigger: GCAGATTCTGTAGAGTCTTCACCCCCTTCCATTACC...CCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGTCGCTGTAATATCATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
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| CDS-3UTR TCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTAGCCGAAGGGCTAGCTaGTTTAGGGCTTTCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCSRRAS*FRAFRV Trigger: GACTCTGAAAGCCCTAAATCAGCTAGCCCTTCGGCT...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
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| CDS-3UTR GCA 90 bp | TATGATATTACAGCGACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTCCAGGAACAAAGGCTaGCCAGGCTTTGTCGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: YDITATRKCWNGHCLRNWSRNKG*PGFVAI Trigger: TATAGCGACAAAGCCTGGGCAGCCTTTGTTCCTGGA...CCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGTCGCTGTAATATCATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
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| CDS-3UTR CCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTGAGGTTGCTCCTCAGTaGGAGCTGCAGCTTCATCTA | + |
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Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCEVAPQ*ELQLHL Trigger: TAGATGAAGCTGCAGCTCCCACTGAGGAGCAACCTC...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
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| CDS-3UTR TCA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATCTCCAAGTCAGCCTGTaGTTCCTGAGGTTGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRSMETIYDITATRKCWNLQVSL*FLRLLL Trigger: GAGGAGCAACCTCAGGAATCACAGGCTGACTTGGAG...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
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| CDS-3UTR TCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTGGTAATGGAAGGGGGTaGAGACTCTACAGAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCGNGRG*RLYRIC Trigger: GCAGATTCTGTAGAGTCTTCACCCCCTTCCATTACC...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
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| CDS-3UTR TCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTTTTGCTTCCTCCCTTaGAGGGCCTCTTTTTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCFCFLP*RASFCH Trigger: GTGGCAAAAAGAGGCCCTTCAAGGGAGGAAGCAAAA...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
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| CDS-3UTR GCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTCCAGGAACAAAGGCTaGCCAGGCTTTGTCGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCSRNKG*PGFVAI Trigger: TATAGCGACAAAGCCTGGGCAGCCTTTGTTCCTGGA...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
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| CDS-3UTR GCA 90 bp | TATGATATTACAGCGACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGGACGGGTTTCGTAAGTaGAGAGAGGACACTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: YDITATRKCWNGHCLRNWDGFRK*REDTCR Trigger: TCTACAAGTGTCCTCTCTGCACTTACGAAACCCGTC...CCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGTCGCTGTAATATCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
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| CDS-3UTR TCA 90 bp | CAAAAAGGATACAGATGGACAGGGTCCATTCTAAGTACAGCTGTGAACCTATATTTTTGCTTCCTCCCTTaGAGGGCCTCTTTTTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QKGYRWTGSILSTAVNLYFCFLP*RASFCH Trigger: GTGGCAAAAAGAGGCCCTTCAAGGGAGGAAGCAAAA...ATATAGGTTCACAGCTGTACTTAGAATGGACCCTGTCCATCTGTATCCTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
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| CDS-3UTR GCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTGATGTCTGCACTGGTTaGTGTAACAAGGGAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCDVCTG*CNKGGS Trigger: AGATCCTCCCTTGTTACAGCAACCAGTGCAGACATC...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
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| CDS-3UTR GCA 90 bp | TATGATATTACAGCGACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGCCAGATTTGGATGTCTaGACTGGTTGCTGTAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: YDITATRKCWNGHCLRNWPDLDV*TGCCNK Trigger: CTTGTTACAGCAACCAGTGCAGACATCCAAATCTGG...CCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGTCGCTGTAATATCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
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| CDS-3UTR GCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTGACGGGTTTCGTAAGTaGAGAGAGGACACTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCDGFRK*REDTCR Trigger: TCTACAAGTGTCCTCTCTGCACTTACGAAACCCGTC...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
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| CDS-3UTR CCA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATGAGGTTGCTCCTCAGTaGGAGCTGCAGCTTCATCTA | + |
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Preference number: 4 (lower is better) Translates to: SRSMETIYDITATRKCWNEVAPQ*ELQLHL Trigger: TAGATGAAGCTGCAGCTCCCACTGAGGAGCAACCTC...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
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| CDS-3UTR TCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTCAACATATCAACTGGTaGCCAAGGTCAGAACTGTCA | + |
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Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCQHINW*PRSELS Trigger: TGACAGTTCTGACCTTGGTCACCAGTTGATATGTTG...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
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| CDS-3UTR TCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTGTACTTTTCGAATGTaGCGACGAACACCTCGTCTA | + |
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Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCCTFRM*RRTPRL Trigger: TAGACGAGGTGTTCGTCGTCACATTCGAAAAGTACA...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
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| CDS-3UTR TCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTCTTACTGCGTCCTTTTaGAGACTGGTTTGGAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCLTASF*RLVWSL Trigger: AAGACTCCAAACCAGTCTTCAAAAGGACGCAGTAAG...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
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| CDS-3UTR TCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTCTCCTTAGTCCTCTGTaGACTTCATCAAAATGCCTC | + |
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Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCLLSPL*TSSKCL Trigger: GAGGCATTTTGATGAAGTTCACAGAGGACTAAGGAG...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
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| CDS-3UTR TCA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATGGTAATGGAAGGGGGTaGAGACTCTACAGAATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRSMETIYDITATRKCWNGNGRG*RLYRIC Trigger: GCAGATTCTGTAGAGTCTTCACCCCCTTCCATTACC...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
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| CDS-3UTR TCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTCTCTAAACTGGCTGTaGTTTTCCCAAGGTAACGAG | + |
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Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCSLNWL*FSQGNE Trigger: CTCGTTACCTTGGGAAAATCACAGCCAGTTTAGAGA...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
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| CDS-3UTR TCA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATTTTTGCTTCCTCCCTTaGAGGGCCTCTTTTTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SRSMETIYDITATRKCWNFCFLP*RASFCH Trigger: GTGGCAAAAAGAGGCCCTTCAAGGGAGGAAGCAAAA...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
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| CDS-3UTR GCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTCCAGATTTGGATGTCTaGACTGGTTGCTGTAACAAG | + |
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Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCPDLDV*TGCCNK Trigger: CTTGTTACAGCAACCAGTGCAGACATCCAAATCTGG...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
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| CDS-3UTR GCA 90 bp | ATTCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGATCCAGGAACAAAGGCTaGCCAGGCTTTGTCGCTATA | + |
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Preference number: 4 (lower is better) Translates to: IQGLWRQYMILQRLESAGSRNKG*PGFVAI Trigger: TATAGCGACAAAGCCTGGGCAGCCTTTGTTCCTGGA...TCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
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| CDS-3UTR GCA 90 bp | CAAAAAGGATACAGATGGACAGGGTCCATTCTAAGTACAGCTGTGAACCTATATGACGGGTTTCGTAAGTaGAGAGAGGACACTTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: QKGYRWTGSILSTAVNLYDGFRK*REDTCR Trigger: TCTACAAGTGTCCTCTCTGCACTTACGAAACCCGTC...ATATAGGTTCACAGCTGTACTTAGAATGGACCCTGTCCATCTGTATCCTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
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| CDS-3UTR CCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTGCTGAATACCAGATTTaGATGTCTGCACTGGTTGCT | + |
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Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCAEYQI*MSALVA Trigger: AGCAACCAGTGCAGACATCCAAATCTGGTATTCAGC...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
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| CDS-3UTR CCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTCATTCTGTGGAGAATaGGTAATGGAAGGGGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCSFCGE*VMEGGE Trigger: TTCACCCCCTTCCATTACCCATTCTCCACAGAATGA...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
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| CDS-3UTR CCA 90 bp | TATGATATTACAGCGACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGCTTGAGTTCATTCTGTaGAGAATGGGTAATGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: YDITATRKCWNGHCLRNWLEFIL*RMGNGR Trigger: CCTTCCATTACCCATTCTCCACAGAATGAACTCAAG...CCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGTCGCTGTAATATCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
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| CDS-3UTR TCA 90 bp | TATGATATTACAGCGACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGCTTGTCTCCTGTATTTaGACTTCAGTTTGTTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: YDITATRKCWNGHCLRNWLVSCI*TSVCSG Trigger: ACCTGAACAAACTGAAGTTCAAATACAGGAGACAAG...CCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGTCGCTGTAATATCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
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| CDS-3UTR TCA 90 bp | CAAAAAGGATACAGATGGACAGGGTCCATTCTAAGTACAGCTGTGAACCTATATCAACATATCAACTGGTaGCCAAGGTCAGAACTGTCA | + |
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Preference number: 4 (lower is better) Translates to: QKGYRWTGSILSTAVNLYQHINW*PRSELS Trigger: TGACAGTTCTGACCTTGGTCACCAGTTGATATGTTG...ATATAGGTTCACAGCTGTACTTAGAATGGACCCTGTCCATCTGTATCCTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
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| CDS-3UTR TCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTAAAGTCAAAGCCAGCTaGAAGTTTTGGTTTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCKVKAS*KFWFPG Trigger: ACCAGGAAACCAAAACTTTCAGCTGGCTTTGACTTT...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
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| CDS-3UTR GCA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATGATGTCTGCACTGGTTaGTGTAACAAGGGAGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: SRSMETIYDITATRKCWNDVCTG*CNKGGS Trigger: AGATCCTCCCTTGTTACAGCAACCAGTGCAGACATC...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
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| CDS-3UTR GCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTCTAGAACACTCTTACTaGGTCCTTTTGAAGACTGGT | + |
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Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCLEHSY*VLLKTG Trigger: ACCAGTCTTCAAAAGGACGCAGTAAGAGTGTTCTAG...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
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| CDS-3UTR CCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTCTTGAGTTCATTCTGTaGAGAATGGGTAATGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCLEFIL*RMGNGR Trigger: CCTTCCATTACCCATTCTCCACAGAATGAACTCAAG...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTTGTACTTCGGCCTTTaGTTTTGTTTCCTTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCLYFGL*FCFLQV Trigger: CACCTGAAGGAAACAAAACCAAAGGCCGAAGTACAA...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR TCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTCTTGTCTCCTGTATTTaGACTTCAGTTTGTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCLVSCI*TSVCSG Trigger: ACCTGAACAAACTGAAGTTCAAATACAGGAGACAAG...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR TCA 90 bp | ATTCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGACAACATATCAACTGGTaGCCAAGGTCAGAACTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IQGLWRQYMILQRLESAGQHINW*PRSELS Trigger: TGACAGTTCTGACCTTGGTCACCAGTTGATATGTTG...TCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR TCA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATTGTACTTTTCGAATGTaGCGACGAACACCTCGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SRSMETIYDITATRKCWNCTFRM*RRTPRL Trigger: TAGACGAGGTGTTCGTCGTCACATTCGAAAAGTACA...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR TCA 90 bp | ATTCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGACTTACTGCGTCCTTTTaGAGACTGGTTTGGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IQGLWRQYMILQRLESAGLTASF*RLVWSL Trigger: AAGACTCCAAACCAGTCTTCAAAAGGACGCAGTAAG...TCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR TCA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATCTTACTGCGTCCTTTTaGAGACTGGTTTGGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRSMETIYDITATRKCWNLTASF*RLVWSL Trigger: AAGACTCCAAACCAGTCTTCAAAAGGACGCAGTAAG...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR TCA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATCTCCTTAGTCCTCTGTaGACTTCATCAAAATGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRSMETIYDITATRKCWNLLSPL*TSSKCL Trigger: GAGGCATTTTGATGAAGTTCACAGAGGACTAAGGAG...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR TCA 90 bp | ATTCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGATCTCTAAACTGGCTGTaGTTTTCCCAAGGTAACGAG | + |
|
Preference number: 4 (lower is better) Translates to: IQGLWRQYMILQRLESAGSLNWL*FSQGNE Trigger: CTCGTTACCTTGGGAAAATCACAGCCAGTTTAGAGA...TCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR TCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTAGTGCCATCCTGTTTTaGGTCATTATGTTTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCSAILF*VIMFCF Trigger: GAAGCAAAACATAATGACTCAAAACAGGATGGCACT...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR GCA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATCCAGATTTGGATGTCTaGACTGGTTGCTGTAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRSMETIYDITATRKCWNPDLDV*TGCCNK Trigger: CTTGTTACAGCAACCAGTGCAGACATCCAAATCTGG...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR GCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTGTTTAGTCAAGTTCTaGTTGGAAGTAAACTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCCLVKF*LEVNWR Trigger: ACGCCAGTTTACTTCCAAGCAGAACTTGACTAAACA...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CCA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATGCTGAATACCAGATTTaGATGTCTGCACTGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRSMETIYDITATRKCWNAEYQI*MSALVA Trigger: AGCAACCAGTGCAGACATCCAAATCTGGTATTCAGC...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CCA 90 bp | TATGATATTACAGCGACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGCTAGGAGATCACTTATaGCTTGGCTTTGTTTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: YDITATRKCWNGHCLRNWLGDHL*LGFVYH Trigger: ATGATAAACAAAGCCAAGCCATAAGTGATCTCCTAG...CCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGTCGCTGTAATATCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTACACTGCATTTTGGTTaGTTTCTATGGGTTCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCTLHFG*FLWVLA Trigger: AGCTAGAACCCATAGAAACCAACCAAAATGCAGTGT...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CCA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATTCATTCTGTGGAGAATaGGTAATGGAAGGGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SRSMETIYDITATRKCWNSFCGE*VMEGGE Trigger: TTCACCCCCTTCCATTACCCATTCTCCACAGAATGA...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAAGGATACAGATGGACAGGGTCCATTCTAAGTACAGCTGTGAACCTATATCTTGAGTTCATTCTGTaGAGAATGGGTAATGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QKGYRWTGSILSTAVNLYLEFIL*RMGNGR Trigger: CCTTCCATTACCCATTCTCCACAGAATGAACTCAAG...ATATAGGTTCACAGCTGTACTTAGAATGGACCCTGTCCATCTGTATCCTTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR TCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTAGGGTTATCAGTCCTTaGAATATATTGAAACACTGC | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCRVISP*NILKHC Trigger: GCAGTGTTTCAATATATTTCAAGGACTGATAACCCT...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR TCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTCGCTTTTGTAGCAAATaGTTTACAACAAACTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCRFCSK*FTTNWT Trigger: TGTCCAGTTTGTTGTAAATCATTTGCTACAAAAGCG...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR TCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTATTGTATTCAGCCTTTaGAGACTTTTGTTTGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCIVFSL*RLLFAS Trigger: ACTCGCAAACAAAAGTCTTCAAAGGCTGAATACAAT...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR TCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTAATGATTTGTTCCCTTaGGTTCATTCTGTGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCNDLFP*VHSVEN Trigger: ATTCTCCACAGAATGAACTCAAGGGAACAAATCATT...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR TCA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATAAAGTCAAAGCCAGCTaGAAGTTTTGGTTTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRSMETIYDITATRKCWNKVKAS*KFWFPG Trigger: ACCAGGAAACCAAAACTTTCAGCTGGCTTTGACTTT...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR TCA 90 bp | CAAAAAGGATACAGATGGACAGGGTCCATTCTAAGTACAGCTGTGAACCTATATAGTGCCATCCTGTTTTaGGTCATTATGTTTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QKGYRWTGSILSTAVNLYSAILF*VIMFCF Trigger: GAAGCAAAACATAATGACTCAAAACAGGATGGCACT...ATATAGGTTCACAGCTGTACTTAGAATGGACCCTGTCCATCTGTATCCTTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR GCA 90 bp | ATTCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGACTAGAACACTCTTACTaGGTCCTTTTGAAGACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IQGLWRQYMILQRLESAGLEHSY*VLLKTG Trigger: ACCAGTCTTCAAAAGGACGCAGTAAGAGTGTTCTAG...TCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR GCA 90 bp | CAAAAAGGATACAGATGGACAGGGTCCATTCTAAGTACAGCTGTGAACCTATATTGTTTAGTCAAGTTCTaGTTGGAAGTAAACTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QKGYRWTGSILSTAVNLYCLVKF*LEVNWR Trigger: ACGCCAGTTTACTTCCAAGCAGAACTTGACTAAACA...ATATAGGTTCACAGCTGTACTTAGAATGGACCCTGTCCATCTGTATCCTTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR GCA 90 bp | TATGATATTACAGCGACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGCCTTTCCACATTTATTaGATCTGTGAAGAGAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YDITATRKCWNGHCLRNWPFHIY*ICEEKS Trigger: ACTTTTCTCTTCACAGATGCAATAAATGTGGAAAGG...CCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGTCGCTGTAATATCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTCTAGGAGATCACTTATaGCTTGGCTTTGTTTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCLGDHL*LGFVYH Trigger: ATGATAAACAAAGCCAAGCCATAAGTGATCTCCTAG...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CCA 90 bp | CAAAAAGGATACAGATGGACAGGGTCCATTCTAAGTACAGCTGTGAACCTATATACACTGCATTTTGGTTaGTTTCTATGGGTTCTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QKGYRWTGSILSTAVNLYTLHFG*FLWVLA Trigger: AGCTAGAACCCATAGAAACCAACCAAAATGCAGTGT...ATATAGGTTCACAGCTGTACTTAGAATGGACCCTGTCCATCTGTATCCTTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTTTTACTTGGAGAATTaGAAGTGCCATCCTGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCFYLEN*KCHPVL Trigger: CAAAACAGGATGGCACTTCCAATTCTCCAAGTAAAA...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CCA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATTTGTACTTCGGCCTTTaGTTTTGTTTCCTTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRSMETIYDITATRKCWNLYFGL*FCFLQV Trigger: CACCTGAAGGAAACAAAACCAAAGGCCGAAGTACAA...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR TCA 90 bp | CAAAAAGGATACAGATGGACAGGGTCCATTCTAAGTACAGCTGTGAACCTATATAGGGTTATCAGTCCTTaGAATATATTGAAACACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QKGYRWTGSILSTAVNLYRVISP*NILKHC Trigger: GCAGTGTTTCAATATATTTCAAGGACTGATAACCCT...ATATAGGTTCACAGCTGTACTTAGAATGGACCCTGTCCATCTGTATCCTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR TCA 90 bp | ATTCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGACTTGTCTCCTGTATTTaGACTTCAGTTTGTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IQGLWRQYMILQRLESAGLVSCI*TSVCSG Trigger: ACCTGAACAAACTGAAGTTCAAATACAGGAGACAAG...TCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR TCA 90 bp | CAAAAAGGATACAGATGGACAGGGTCCATTCTAAGTACAGCTGTGAACCTATATCGCTTTTGTAGCAAATaGTTTACAACAAACTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: QKGYRWTGSILSTAVNLYRFCSK*FTTNWT Trigger: TGTCCAGTTTGTTGTAAATCATTTGCTACAAAAGCG...ATATAGGTTCACAGCTGTACTTAGAATGGACCCTGTCCATCTGTATCCTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR TCA 90 bp | CAAAAAGGATACAGATGGACAGGGTCCATTCTAAGTACAGCTGTGAACCTATATATTGTATTCAGCCTTTaGAGACTTTTGTTTGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QKGYRWTGSILSTAVNLYIVFSL*RLLFAS Trigger: ACTCGCAAACAAAAGTCTTCAAAGGCTGAATACAAT...ATATAGGTTCACAGCTGTACTTAGAATGGACCCTGTCCATCTGTATCCTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR TCA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATAGTGCCATCCTGTTTTaGGTCATTATGTTTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRSMETIYDITATRKCWNSAILF*VIMFCF Trigger: GAAGCAAAACATAATGACTCAAAACAGGATGGCACT...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR GCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTGCAAAGGAGGCATTTaGATGCAGTTAAATTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCCKGGI*MQLNCI Trigger: AATACAATTTAACTGCATGCAAATGCCTCCTTTGCA...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR GCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTTATTTCCATCTGTGTaGAACTCAATGTGTTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCLFPSV*NSMCLV Trigger: GACTAAACACATTGAGTTGCACACAGATGGAAATAA...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR GCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTCCTTTCCACATTTATTaGATCTGTGAAGAGAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCPFHIY*ICEEKS Trigger: ACTTTTCTCTTCACAGATGCAATAAATGTGGAAAGG...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CCA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATCCACTCTTGGATATATaGCTTCTAGGAGATCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: SRSMETIYDITATRKCWNPLLDI*LLGDHL Trigger: TAAGTGATCTCCTAGAAGCCATATATCCAAGAGTGG...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAAGGATACAGATGGACAGGGTCCATTCTAAGTACAGCTGTGAACCTATATTTTTACTTGGAGAATTaGAAGTGCCATCCTGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QKGYRWTGSILSTAVNLYFYLEN*KCHPVL Trigger: CAAAACAGGATGGCACTTCCAATTCTCCAAGTAAAA...ATATAGGTTCACAGCTGTACTTAGAATGGACCCTGTCCATCTGTATCCTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CCA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTTCATACTTTTTACTTaGAGAATTGGAAGTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCFILFT*RIGSAI Trigger: GATGGCACTTCCAATTCTCCAAGTAAAAAGTATGAA...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR TCA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATATTGTATTCAGCCTTTaGAGACTTTTGTTTGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRSMETIYDITATRKCWNIVFSL*RLLFAS Trigger: ACTCGCAAACAAAAGTCTTCAAAGGCTGAATACAAT...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR TCA 90 bp | ATTCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAAATGATTTGTTCCCTTaGGTTCATTCTGTGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: IQGLWRQYMILQRLESAGNDLFP*VHSVEN Trigger: ATTCTCCACAGAATGAACTCAAGGGAACAAATCATT...TCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR TCA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATAATGATTTGTTCCCTTaGGTTCATTCTGTGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SRSMETIYDITATRKCWNNDLFP*VHSVEN Trigger: ATTCTCCACAGAATGAACTCAAGGGAACAAATCATT...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATTTTTACTTGGAGAATTaGAAGTGCCATCCTGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRSMETIYDITATRKCWNFYLEN*KCHPVL Trigger: CAAAACAGGATGGCACTTCCAATTCTCCAAGTAAAA...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR GCA 90 bp | ATTCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGATGCAAAGGAGGCATTTaGATGCAGTTAAATTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: IQGLWRQYMILQRLESAGCKGGI*MQLNCI Trigger: AATACAATTTAACTGCATGCAAATGCCTCCTTTGCA...TCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR GCA 90 bp | ATTCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGATTATTTCCATCTGTGTaGAACTCAATGTGTTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: IQGLWRQYMILQRLESAGLFPSV*NSMCLV Trigger: GACTAAACACATTGAGTTGCACACAGATGGAAATAA...TCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATTTATTTCCATCTGTGTaGAACTCAATGTGTTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SRSMETIYDITATRKCWNLFPSV*NSMCLV Trigger: GACTAAACACATTGAGTTGCACACAGATGGAAATAA...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATTTCATACTTTTTACTTaGAGAATTGGAAGTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SRSMETIYDITATRKCWNFILFT*RIGSAI Trigger: GATGGCACTTCCAATTCTCCAAGTAAAAAGTATGAA...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CCA 90 bp | ATTCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGATTCATACTTTTTACTTaGAGAATTGGAAGTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: IQGLWRQYMILQRLESAGFILFT*RIGSAI Trigger: GATGGCACTTCCAATTCTCCAAGTAAAAAGTATGAA...TCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS TCA 90 bp | CTGGTGACCAAGGTCAGAACTGTCAGACGTCTCCAAGTCAGCCTGTaGTTCCTGAGGTTGCTCCTCAGTGGGAGCTGCAGCTTCATCTAC | + |
|
Preference number: 5 (lower is better) Translates to: LVTKVRTVRRLQVSL*FLRLLLSGSCSFIY Trigger: GTAGATGAAGCTGCAGCTCCCACTGAGGAGCAACCTCAGGAATCACAGGCTGACTTGGAGACGTCTGACAGTTCTGACCTTGGTCACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 |
||
| CDS TCA 90 bp | CCAAGGTCAGAACTGTCAGACGTCTCCAAGTCAGCCTGTGATTCCTaGGGTTGCTCCTCAGTGGGAGCTGCAGCTTCATCTACAACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PRSELSDVSKSACDS*GCSSVGAAASSTTV Trigger: GACTGTTGTAGATGAAGCTGCAGCTCCCACTGAGGAGCAACCTCAGGAATCACAGGCTGACTTGGAGACGTCTGACAGTTCTGACCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 |
||
| CDS TCA 90 bp | GCGTCGGGGACTGCTTTCAGCTGTTCTGAGCTTGTCTCCTGTATTTaGACTTCAGTTTGTTCAGGTGTACTGCTTGACTCGGTCACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASGTAFSCSELVSCI*TSVCSGVLLDSVTS Trigger: TGAAGTGACCGAGTCAAGCAGTACACCTGAACAAACTGAAGTTCAAATACAGGAGACAAGCTCAGAACAGCTGAAAGCAGTCCCCGACGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 |
||
| CDS TCA 90 bp | CTCCTCCACCTCTGTATCTGCGTCGGGGACTGCTTTCAGCTGTTCTaGGCTTGTCTCCTGTATTTGAACTTCAGTTTGTTCAGGTGTACT | + |
|
Preference number: 5 (lower is better) Translates to: LLHLCICVGDCFQLF*ACLLYLNFSLFRCT Trigger: AGTACACCTGAACAAACTGAAGTTCAAATACAGGAGACAAGCTCAGAACAGCTGAAAGCAGTCCCCGACGCAGATACAGAGGTGGAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 |
||
| CDS-3UTR CAA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTGGTTTCCTGGTTTTTaGCTGGCCACCTGCAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCWFPGF*LATCSR Trigger: TCGGCTGCAGGTGGCCAGCAAAAAACCAGGAAACCA...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS CCA 90 bp | TGGTTCCTGATCGAAAGCACTCAATTATTTGCTGAATACCAGATTTaGATGTCTGCACTGGTTGCTGTAACAAGGGAGGATCTCCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: WFLIESTQLFAEYQI*MSALVAVTREDLQA Trigger: AGCCTGGAGATCCTCCCTTGTTACAGCAACCAGTGCAGACATCCAAATCTGGTATTCAGCAAATAATTGAGTGCTTTCGATCAGGAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 ENSMUST00000155494.2 |
||
| CDS-3UTR CAA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATTGGTTTCCTGGTTTTTaGCTGGCCACCTGCAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SRSMETIYDITATRKCWNWFPGF*LATCSR Trigger: TCGGCTGCAGGTGGCCAGCAAAAAACCAGGAAACCA...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTGTTTTGCTTCCTCCCTaGAAGGGCCTCTTTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCVLLPP*KGLFLP Trigger: TGGCAAAAAGAGGCCCTTCAAGGGAGGAAGCAAAAC...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CAA 90 bp | TATGATATTACAGCGACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGATGATGGTGGTCCGTTaGACAGTATTTGTCCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: YDITATRKCWNGHCLRNWMMVVR*TVFVPQ Trigger: TTGAGGGACAAATACTGTCAAACGGACCACCATCAT...CCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGTCGCTGTAATATCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | TATGATATTACAGCGACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGAAGATTGTCATCCATTaGGAGACTTGGTGGGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: YDITATRKCWNGHCLRNWKIVIH*ETWWAV Trigger: TACTGCCCACCAAGTCTCCAAATGGATGACAATCTT...CCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGTCGCTGTAATATCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS GCA 90 bp | CTGAGCTTGTCTCCTGTATTTGAACTTCAGTTTGTTCAGGTGTACTaGTTGACTCGGTCACTTCAGCAGGGTTATCAGTCCTTGAAATAT | + |
|
Preference number: 5 (lower is better) Translates to: LSLSPVFELQFVQVY*LTRSLQQGYQSLKY Trigger: ATATTTCAAGGACTGATAACCCTGCTGAAGTGACCGAGTCAAGCAGTACACCTGAACAAACTGAAGTTCAAATACAGGAGACAAGCTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 |
||
| CDS-3UTR CAA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTATGATGGTGGTCCGTTaGACAGTATTTGTCCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCMMVVR*TVFVPQ Trigger: TTGAGGGACAAATACTGTCAAACGGACCACCATCAT...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CAA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTCTCTCTTGTCCACTCTaGGATATATGGCTTCTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCLSCPL*DIWLLG Trigger: TCCTAGAAGCCATATATCCAAGAGTGGACAAGAGAG...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CAA 90 bp | TATGATATTACAGCGACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTCAGCTGTTCTGAGCTaGTCTCCTGTATTTGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: YDITATRKCWNGHCLRNWSAVLS*SPVFEL Trigger: AAGTTCAAATACAGGAGACAAGCTCAGAACAGCTGA...CCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGTCGCTGTAATATCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTCTTACTGCGTCCTTTaGAAGACTGGTTTGGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCSYCVL*KTGLES Trigger: AGACTCCAAACCAGTCTTCAAAAGGACGCAGTAAGA...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CAA 90 bp | ATTCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAGTTTTGCTTCCTCCCTaGAAGGGCCTCTTTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: IQGLWRQYMILQRLESAGVLLPP*KGLFLP Trigger: TGGCAAAAAGAGGCCCTTCAAGGGAGGAAGCAAAAC...TCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTTGAGTCATTATGTTTaGCTTCCTCCCTTGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCLSHYV*LPPLKG Trigger: GCCCTTCAAGGGAGGAAGCAAAACATAATGACTCAA...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CAA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTCTTGTACTTCGGCCTTaGGTTTTGTTTCCTTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCLVLRP*VLFPSG Trigger: ACCTGAAGGAAACAAAACCAAAGGCCGAAGTACAAG...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CAA 90 bp | CAAAAAGGATACAGATGGACAGGGTCCATTCTAAGTACAGCTGTGAACCTATATCTCTCTTGTCCACTCTaGGATATATGGCTTCTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QKGYRWTGSILSTAVNLYLSCPL*DIWLLG Trigger: TCCTAGAAGCCATATATCCAAGAGTGGACAAGAGAG...ATATAGGTTCACAGCTGTACTTAGAATGGACCCTGTCCATCTGTATCCTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTCAGCTGTTCTGAGCTaGTCTCCTGTATTTGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCSAVLS*SPVFEL Trigger: AAGTTCAAATACAGGAGACAAGCTCAGAACAGCTGA...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CAA 90 bp | CAAAAAGGATACAGATGGACAGGGTCCATTCTAAGTACAGCTGTGAACCTATATTCTTACTGCGTCCTTTaGAAGACTGGTTTGGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QKGYRWTGSILSTAVNLYSYCVL*KTGLES Trigger: AGACTCCAAACCAGTCTTCAAAAGGACGCAGTAAGA...ATATAGGTTCACAGCTGTACTTAGAATGGACCCTGTCCATCTGTATCCTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS GCA 90 bp | AACAAACTGGACAGCTCCTACTTAATGAAACTAGAACACTCTTACTaGGTCCTTTTGAAGACTGGTTTGGAGTCTTCCGTGTTTCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: NKLDSSYLMKLEHSY*VLLKTGLESSVFQC Trigger: ACATTGAAACACGGAAGACTCCAAACCAGTCTTCAAAAGGACGCAGTAAGAGTGTTCTAGTTTCATTAAGTAGGAGCTGTCCAGTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 |
||
| CDS-3UTR CAA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTCATCCATTTGGAGACTaGGTGGGCAGTAAAATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCHPFGD*VGSKIF Trigger: AAAAATTTTACTGCCCACCAAGTCTCCAAATGGATG...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CAA 90 bp | ATTCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAAAGATTGTCATCCATTaGGAGACTTGGTGGGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: IQGLWRQYMILQRLESAGKIVIH*ETWWAV Trigger: TACTGCCCACCAAGTCTCCAAATGGATGACAATCTT...TCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTTGAAACACTGCATTTaGGTTGGTTTCTATGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCLKHCI*VGFYGF Trigger: GAACCCATAGAAACCAACCAAAATGCAGTGTTTCAA...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CAA 90 bp | TATGATATTACAGCGACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGCAGGGTTATCAGTCCTaGAAATATATTGAAACACTG | + |
|
Preference number: 5 (lower is better) Translates to: YDITATRKCWNGHCLRNWQGYQS*KYIETL Trigger: CAGTGTTTCAATATATTTCAAGGACTGATAACCCTG...CCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGTCGCTGTAATATCATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTTTACTTCTGAACTGTaGGCAGTATTATTAGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCFTSEL*AVLLGP Trigger: AGGCCCTAATAATACTGCCAACAGTTCAGAAGTAAA...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CAA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTGAGTTTACAGTAAAGTaGCTTAAAGTCAAAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCEFTVK*LKVKAS Trigger: GCTGGCTTTGACTTTAAGCAACTTTACTGTAAACTC...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CAA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTTAGTCAAGTTCTGCTaGGAAGTAAACTGGCGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCLVKFC*EVNWRL Trigger: TAAACGCCAGTTTACTTCCAAGCAGAACTTGACTAA...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CAA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTTGAAGGGCCTCTTTTaGCCACTTTGTTTAGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCLKGLF*PLCLEQ Trigger: TTGTTCTAAACAAAGTGGCAAAAAGAGGCCCTTCAA...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CAA 90 bp | ATTCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGATTGAGTCATTATGTTTaGCTTCCTCCCTTGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: IQGLWRQYMILQRLESAGLSHYV*LPPLKG Trigger: GCCCTTCAAGGGAGGAAGCAAAACATAATGACTCAA...TCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | TATGATATTACAGCGACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTTTTACTTGGAGAATaGGAAGTGCCATCCTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: YDITATRKCWNGHCLRNWFLLGE*EVPSCF Trigger: AAAACAGGATGGCACTTCCAATTCTCCAAGTAAAAA...CCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGTCGCTGTAATATCATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATCTTGTACTTCGGCCTTaGGTTTTGTTTCCTTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SRSMETIYDITATRKCWNLVLRP*VLFPSG Trigger: ACCTGAAGGAAACAAAACCAAAGGCCGAAGTACAAG...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS TCA 90 bp | TGTTTAAGTTGTTTGGTTCCTGATCGAAAGCACTCAATTATTTGCTaGATACCAGATTTGGATGTCTGCACTGGTTGCTGTAACAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CLSCLVPDRKHSIIC*IPDLDVCTGCCNKG Trigger: TCCCTTGTTACAGCAACCAGTGCAGACATCCAAATCTGGTATTCAGCAAATAATTGAGTGCTTTCGATCAGGAACCAAACAACTTAAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 ENSMUST00000155494.2 |
||
| CDS-3UTR CAA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTGAGATCACTTATGGCTaGGCTTTGTTTATCATTTAC | + |
|
Preference number: 5 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCEITYG*ALFIIY Trigger: GTAAATGATAAACAAAGCCAAGCCATAAGTGATCTC...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CAA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTCAGGGTTATCAGTCCTaGAAATATATTGAAACACTG | + |
|
Preference number: 5 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCQGYQS*KYIETL Trigger: CAGTGTTTCAATATATTTCAAGGACTGATAACCCTG...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CAA 90 bp | ATTCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGATCAGCTGTTCTGAGCTaGTCTCCTGTATTTGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: IQGLWRQYMILQRLESAGSAVLS*SPVFEL Trigger: AAGTTCAAATACAGGAGACAAGCTCAGAACAGCTGA...TCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTTGCATGCAGTTAAATaGTATTCAGCCTTTGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCLHAVK*YSAFED Trigger: GTCTTCAAAGGCTGAATACAATTTAACTGCATGCAA...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CAA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTTGCAAAGGAGGCATTaGCATGCAGTTAAATTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCLQRRH*HAVKLY Trigger: ATACAATTTAACTGCATGCAAATGCCTCCTTTGCAA...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CAA 90 bp | CAAAAAGGATACAGATGGACAGGGTCCATTCTAAGTACAGCTGTGAACCTATATTTAGTCAAGTTCTGCTaGGAAGTAAACTGGCGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: QKGYRWTGSILSTAVNLYLVKFC*EVNWRL Trigger: TAAACGCCAGTTTACTTCCAAGCAGAACTTGACTAA...ATATAGGTTCACAGCTGTACTTAGAATGGACCCTGTCCATCTGTATCCTTTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTAAGTGCCATCCTGTTTaGAGTCATTATGTTTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCKCHPV*SHYVLL Trigger: AAGCAAAACATAATGACTCAAAACAGGATGGCACTT...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CAA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTTTTTTACTTGGAGAATaGGAAGTGCCATCCTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCFLLGE*EVPSCF Trigger: AAAACAGGATGGCACTTCCAATTCTCCAAGTAAAAA...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS-3UTR CAA 90 bp | ACTCGAAAGTGCTGGAATGGGCATTGCCTTAGAAACTGGTTAGATGGTTATTGTCTTCATACTTTTTACTaGGAGAATTGGAAGTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TRKCWNGHCLRNWLDGYCLHTFY*ENWKCH Trigger: ATGGCACTTCCAATTCTCCAAGTAAAAAGTATGAAG...ACAATAACCATCTAACCAGTTTCTAAGGCAATGCCCATTCCAGCACTTTCGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS TCA 90 bp | CTTGACTCGGTCACTTCAGCAGGGTTATCAGTCCTTGAAATATATTaGAACACTGCATTTTGGTTGGTTTCTATGGGTTCTAGCTTAATA | + |
|
Preference number: 5 (lower is better) Translates to: LDSVTSAGLSVLEIY*NTAFWLVSMGSSLI Trigger: TATTAAGCTAGAACCCATAGAAACCAACCAAAATGCAGTGTTTCAATATATTTCAAGGACTGATAACCCTGCTGAAGTGACCGAGTCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 ENSMUST00000155494.2 |
||
| CDS TCA 90 bp | TTTGTCGCTATATCAGGAGTAATTGAATCCCTCCTTAGTCCTCTGTaGACTTCATCAAAATGCCTCCTTACATTCGCTTTTGTAGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: FVAISGVIESLLSPL*TSSKCLLTFAFVAN Trigger: ATTTGCTACAAAAGCGAATGTAAGGAGGCATTTTGATGAAGTTCACAGAGGACTAAGGAGGGATTCAATTACTCCTGATATAGCGACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAAGGATACAGATGGACAGGGTCCATTCTAAGTACAGCTGTGAACCTATATCAGGGTTATCAGTCCTaGAAATATATTGAAACACTG | + |
|
Preference number: 5 (lower is better) Translates to: QKGYRWTGSILSTAVNLYQGYQS*KYIETL Trigger: CAGTGTTTCAATATATTTCAAGGACTGATAACCCTG...ATATAGGTTCACAGCTGTACTTAGAATGGACCCTGTCCATCTGTATCCTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAAGGATACAGATGGACAGGGTCCATTCTAAGTACAGCTGTGAACCTATATTTGCATGCAGTTAAATaGTATTCAGCCTTTGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QKGYRWTGSILSTAVNLYLHAVK*YSAFED Trigger: GTCTTCAAAGGCTGAATACAATTTAACTGCATGCAA...ATATAGGTTCACAGCTGTACTTAGAATGGACCCTGTCCATCTGTATCCTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAAGGATACAGATGGACAGGGTCCATTCTAAGTACAGCTGTGAACCTATATTTGCAAAGGAGGCATTaGCATGCAGTTAAATTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: QKGYRWTGSILSTAVNLYLQRRH*HAVKLY Trigger: ATACAATTTAACTGCATGCAAATGCCTCCTTTGCAA...ATATAGGTTCACAGCTGTACTTAGAATGGACCCTGTCCATCTGTATCCTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATTTTACTTCTGAACTGTaGGCAGTATTATTAGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SRSMETIYDITATRKCWNFTSEL*AVLLGP Trigger: AGGCCCTAATAATACTGCCAACAGTTCAGAAGTAAA...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | ATTCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGATTTACTTCTGAACTGTaGGCAGTATTATTAGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: IQGLWRQYMILQRLESAGFTSEL*AVLLGP Trigger: AGGCCCTAATAATACTGCCAACAGTTCAGAAGTAAA...TCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATGAGTTTACAGTAAAGTaGCTTAAAGTCAAAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRSMETIYDITATRKCWNEFTVK*LKVKAS Trigger: GCTGGCTTTGACTTTAAGCAACTTTACTGTAAACTC...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | ATTCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAGAGTTTACAGTAAAGTaGCTTAAAGTCAAAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IQGLWRQYMILQRLESAGEFTVK*LKVKAS Trigger: GCTGGCTTTGACTTTAAGCAACTTTACTGTAAACTC...TCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATTTAGTCAAGTTCTGCTaGGAAGTAAACTGGCGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SRSMETIYDITATRKCWNLVKFC*EVNWRL Trigger: TAAACGCCAGTTTACTTCCAAGCAGAACTTGACTAA...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | ATTCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGATTGAAGGGCCTCTTTTaGCCACTTTGTTTAGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: IQGLWRQYMILQRLESAGLKGLF*PLCLEQ Trigger: TTGTTCTAAACAAAGTGGCAAAAAGAGGCCCTTCAA...TCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATTTGAAGGGCCTCTTTTaGCCACTTTGTTTAGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: SRSMETIYDITATRKCWNLKGLF*PLCLEQ Trigger: TTGTTCTAAACAAAGTGGCAAAAAGAGGCCCTTCAA...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAAGGATACAGATGGACAGGGTCCATTCTAAGTACAGCTGTGAACCTATATAAGTGCCATCCTGTTTaGAGTCATTATGTTTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QKGYRWTGSILSTAVNLYKCHPV*SHYVLL Trigger: AAGCAAAACATAATGACTCAAAACAGGATGGCACTT...ATATAGGTTCACAGCTGTACTTAGAATGGACCCTGTCCATCTGTATCCTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAAGGATACAGATGGACAGGGTCCATTCTAAGTACAGCTGTGAACCTATATCTTCATACTTTTTACTaGGAGAATTGGAAGTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QKGYRWTGSILSTAVNLYLHTFY*ENWKCH Trigger: ATGGCACTTCCAATTCTCCAAGTAAAAAGTATGAAG...ATATAGGTTCACAGCTGTACTTAGAATGGACCCTGTCCATCTGTATCCTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | ATTCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAGAGATCACTTATGGCTaGGCTTTGTTTATCATTTAC | + |
|
Preference number: 5 (lower is better) Translates to: IQGLWRQYMILQRLESAGEITYG*ALFIIY Trigger: GTAAATGATAAACAAAGCCAAGCCATAAGTGATCTC...TCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | TCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGAATTTGCATGCAGTTAAATaGTATTCAGCCTTTGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SRSMETIYDITATRKCWNLHAVK*YSAFED Trigger: GTCTTCAAAGGCTGAATACAATTTAACTGCATGCAA...ATTCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | ATTCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGATTGCAAAGGAGGCATTaGCATGCAGTTAAATTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: IQGLWRQYMILQRLESAGLQRRH*HAVKLY Trigger: ATACAATTTAACTGCATGCAAATGCCTCCTTTGCAA...TCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS-3UTR CAA 90 bp | ATTCAAGGTCTATGGAGACAATATATGATATTACAGCGACTCGAAAGTGCTGGACTTCATACTTTTTACTaGGAGAATTGGAAGTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: IQGLWRQYMILQRLESAGLHTFY*ENWKCH Trigger: ATGGCACTTCCAATTCTCCAAGTAAAAAGTATGAAG...TCCAGCACTTTCGAGTCGCTGTAATATCATATATTGTCTCCATAGACCTTGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 |
||
| CDS TCA 72 bp | AAGGTCAGAACTGTCAGACGTCTCCAAGTCAGCCTGTaGTTCCTGAGGTTGCTCCTCAGTGGGAGCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KVRTVRRLQVSL*FLRLLLSGSCS Trigger: GCTGCAGCTCCCACTGAGGAGCAACCTCAGGAATCACAGGCTGACTTGGAGACGTCTGACAGTTCTGACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 |
||
| CDS TCA 72 bp | GAACTGTCAGACGTCTCCAAGTCAGCCTGTGATTCCTaGGGTTGCTCCTCAGTGGGAGCTGCAGCTTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: ELSDVSKSACDS*GCSSVGAAASS Trigger: AGATGAAGCTGCAGCTCCCACTGAGGAGCAACCTCAGGAATCACAGGCTGACTTGGAGACGTCTGACAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 |
||
| CDS CAA 90 bp | CCACCTCTGTATCTGCGTCGGGGACTGCTTTCAGCTGTTCTGAGCTaGTCTCCTGTATTTGAACTTCAGTTTGTTCAGGTGTACTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PPLYLRRGLLSAVLS*SPVFELQFVQVYCL Trigger: CAAGCAGTACACCTGAACAAACTGAAGTTCAAATACAGGAGACAAGCTCAGAACAGCTGAAAGCAGTCCCCGACGCAGATACAGAGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 |
||
| CDS TCA 72 bp | CTCTGTATCTGCGTCGGGGACTGCTTTCAGCTGTTCTaGGCTTGTCTCCTGTATTTGAACTTCAGTTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LCICVGDCFQLF*ACLLYLNFSLF Trigger: GAACAAACTGAAGTTCAAATACAGGAGACAAGCTCAGAACAGCTGAAAGCAGTCCCCGACGCAGATACAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 |
||
| CDS TCA 72 bp | ACTGCTTTCAGCTGTTCTGAGCTTGTCTCCTGTATTTaGACTTCAGTTTGTTCAGGTGTACTGCTTGACTCG | + |
|
Preference number: 6 (lower is better) Translates to: TAFSCSELVSCI*TSVCSGVLLDS Trigger: CGAGTCAAGCAGTACACCTGAACAAACTGAAGTTCAAATACAGGAGACAAGCTCAGAACAGCTGAAAGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 |
||
| CDS GCA 72 bp | GACAGCTCCTACTTAATGAAACTAGAACACTCTTACTaGGTCCTTTTGAAGACTGGTTTGGAGTCTTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: DSSYLMKLEHSY*VLLKTGLESSV Trigger: CACGGAAGACTCCAAACCAGTCTTCAAAAGGACGCAGTAAGAGTGTTCTAGTTTCATTAAGTAGGAGCTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 |
||
| CDS CAA 72 bp | AATTGGAAGTGCCATCCTGTTTTGAGTCATTATGTTTaGCTTCCTCCCTTGAAGGGCCTCTTTTTGCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: NWKCHPVLSHYV*LPPLKGLFLPL Trigger: AAGTGGCAAAAAGAGGCCCTTCAAGGGAGGAAGCAAAACATAATGACTCAAAACAGGATGGCACTTCCAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS CAA 90 bp | CAGGTGTACTGCTTGACTCGGTCACTTCAGCAGGGTTATCAGTCCTaGAAATATATTGAAACACTGCATTTTGGTTGGTTTCTATGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: QVYCLTRSLQQGYQS*KYIETLHFGWFLWV Trigger: AACCCATAGAAACCAACCAAAATGCAGTGTTTCAATATATTTCAAGGACTGATAACCCTGCTGAAGTGACCGAGTCAAGCAGTACACCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 |
||
| CDS TCA 72 bp | TGTTTGGTTCCTGATCGAAAGCACTCAATTATTTGCTaGATACCAGATTTGGATGTCTGCACTGGTTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CLVPDRKHSIIC*IPDLDVCTGCC Trigger: ACAGCAACCAGTGCAGACATCCAAATCTGGTATTCAGCAAATAATTGAGTGCTTTCGATCAGGAACCAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 ENSMUST00000155494.2 |
||
| CDS GCA 72 bp | CCATCTGTGTGCAACTCAATGTGTTTAGTCAAGTTCTaGTTGGAAGTAAACTGGCGTTTACAGAGTTTACAG | + |
|
Preference number: 6 (lower is better) Translates to: PSVCNSMCLVKF*LEVNWRLQSLQ Trigger: CTGTAAACTCTGTAAACGCCAGTTTACTTCCAAGCAGAACTTGACTAAACACATTGAGTTGCACACAGATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS CCA 72 bp | ATCGAAAGCACTCAATTATTTGCTGAATACCAGATTTaGATGTCTGCACTGGTTGCTGTAACAAGGGAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: IESTQLFAEYQI*MSALVAVTRED Trigger: ATCCTCCCTTGTTACAGCAACCAGTGCAGACATCCAAATCTGGTATTCAGCAAATAATTGAGTGCTTTCGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 ENSMUST00000155494.2 |
||
| CDS CAA 72 bp | ACTTTTTACTTGGAGAATTGGAAGTGCCATCCTGTTTaGAGTCATTATGTTTTGCTTCCTCCCTTGAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TFYLENWKCHPV*SHYVLLPPLKG Trigger: GCCCTTCAAGGGAGGAAGCAAAACATAATGACTCAAAACAGGATGGCACTTCCAATTCTCCAAGTAAAAAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS CAA 72 bp | CTTCAATACCGACGTCGGCTACTTCATACTTTTTACTaGGAGAATTGGAAGTGCCATCCTGTTTTGAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LQYRRRLLHTFY*ENWKCHPVLSH Trigger: ATGACTCAAAACAGGATGGCACTTCCAATTCTCCAAGTAAAAAGTATGAAGTAGCCGACGTCGGTATTGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS CAA 90 bp | AGCTTGTCTCCTGTATTTGAACTTCAGTTTGTTCAGGTGTACTGCTaGACTCGGTCACTTCAGCAGGGTTATCAGTCCTTGAAATATATT | + |
|
Preference number: 6 (lower is better) Translates to: SLSPVFELQFVQVYC*TRSLQQGYQSLKYI Trigger: AATATATTTCAAGGACTGATAACCCTGCTGAAGTGACCGAGTCAAGCAGTACACCTGAACAAACTGAAGTTCAAATACAGGAGACAAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 |
||
| CDS CAA 90 bp | TACTTGGAGAATTGGAAGTGCCATCCTGTTTTGAGTCATTATGTTTaGCTTCCTCCCTTGAAGGGCCTCTTTTTGCCACTTTGTTTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: YLENWKCHPVLSHYV*LPPLKGLFLPLCLE Trigger: TTCTAAACAAAGTGGCAAAAAGAGGCCCTTCAAGGGAGGAAGCAAAACATAATGACTCAAAACAGGATGGCACTTCCAATTCTCCAAGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
||
| CDS CAA 90 bp | GAAGACTCTACAGAATCTGCTAGCTCAACTTTTACTTCTGAACTGTaGGCAGTATTATTAGGGCCTTTCTCTCTTTTAGAGTTTGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: EDSTESASSTFTSEL*AVLLGPFSLLEFAP Trigger: TGGAGCAAACTCTAAAAGAGAGAAAGGCCCTAATAATACTGCCAACAGTTCAGAAGTAAAAGTTGAGCTAGCAGATTCTGTAGAGTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 |
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| CDS CAA 72 bp | CCGACGTCGGCTACTTCATACTTTTTACTTGGAGAATaGGAAGTGCCATCCTGTTTTGAGTCATTATGTTTT | + |
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Preference number: 6 (lower is better) Translates to: PTSATSYFLLGE*EVPSCFESLCF Trigger: AAAACATAATGACTCAAAACAGGATGGCACTTCCAATTCTCCAAGTAAAAAGTATGAAGTAGCCGACGTCGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 |
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| CDS TCA 72 bp | GTCACTTCAGCAGGGTTATCAGTCCTTGAAATATATTaGAACACTGCATTTTGGTTGGTTTCTATGGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: VTSAGLSVLEIY*NTAFWLVSMGS Trigger: AGAACCCATAGAAACCAACCAAAATGCAGTGTTTCAATATATTTCAAGGACTGATAACCCTGCTGAAGTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 ENSMUST00000155494.2 |
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| CDS CAA 72 bp | TACTTAATGAAACTAGAACACTCTTACTGCGTCCTTTaGAAGACTGGTTTGGAGTCTTCCGTGTTTCAATGT | + |
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Preference number: 6 (lower is better) Translates to: YLMKLEHSYCVL*KTGLESSVFQC Trigger: ACATTGAAACACGGAAGACTCCAAACCAGTCTTCAAAAGGACGCAGTAAGAGTGTTCTAGTTTCATTAAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 |
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| CDS CAA 72 bp | ACAGAATCTGCTAGCTCAACTTTTACTTCTGAACTGTaGGCAGTATTATTAGGGCCTTTCTCTCTTTTAGAG | + |
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Preference number: 6 (lower is better) Translates to: TESASSTFTSEL*AVLLGPFSLLE Trigger: CTCTAAAAGAGAGAAAGGCCCTAATAATACTGCCAACAGTTCAGAAGTAAAAGTTGAGCTAGCAGATTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 |
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| CDS CAA 90 bp | TTTTGGTTGGTTTCTATGGGTTCTAGCTTAATAATATATTCTCTCTaGTCCACTCTTGGATATATGGCTTCTAGGAGATCACTTATGGCT | + |
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Preference number: 6 (lower is better) Translates to: FWLVSMGSSLIIYSL*STLGYMASRRSLMA Trigger: AGCCATAAGTGATCTCCTAGAAGCCATATATCCAAGAGTGGACAAGAGAGAATATATTATTAAGCTAGAACCCATAGAAACCAACCAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 ENSMUST00000155494.2 |
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| CDS CAA 90 bp | GAACTGTATTTCCTCTTGCAAAGGAGGCATTTGCATGCAGTTAAATaGTATTCAGCCTTTGAAGACTTTTGTTTGCGAGTCTTAAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: ELYFLLQRRHLHAVK*YSAFEDFCLRVLKD Trigger: ATCTTTTAAGACTCGCAAACAAAAGTCTTCAAAGGCTGAATACAATTTAACTGCATGCAAATGCCTCCTTTGCAAGAGGAAATACAGTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000035930.11 ENSMUST00000115320.8 ENSMUST00000115321.9 ENSMUST00000123098.8 |
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