Pregenerated sensors for ZFP799 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000095253Ensembl transcript IDs: ENSMUST00000179695.5, ENSMUST00000201499.2, ENSMUST00000201876.4, ENSMUST00000202988.4
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAATACTGGGCGGGGGCTGGAGAGATGGCAGTAAAGAGCACTGACTaGTCTGTCAGAGGTCCTGAGTTCAGTTCCCAGCAACCACATGGT | + |
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Preference number: 1 (lower is better) Translates to: EYWAGAGEMAVKSTD*SVRGPEFSSQQPHG Trigger: ACCATGTGGTTGCTGGGAACTGAACTCAGGACCTCTGACAGAGCAGTCAGTGCTCTTTACTGCCATCTCTCCAGCCCCCGCCCAGTATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR CCA 90 bp | CCTAACTCTCCTTTAGGGAGATGGGTGTGTGTGTGTGTGCGCGCATaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGACAGGTG | + |
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Preference number: 1 (lower is better) Translates to: PNSPLGRWVCVCVRA*CVCVCVCVCVCRQV Trigger: CACCTGTCTACACACACACACACACACACACACACACACACACCATGCGCGCACACACACACACACCCATCTCCCTAAAGGAGAGTTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR CCA 90 bp | CTCTGCCTTTCAAGTGTTGGGATGAAGGGTGTGCCACACCATGTCTaGCCTAAAGTTCTCTTTACCCATGAGCAGGGCCAGGTGTTTCAC | + |
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Preference number: 1 (lower is better) Translates to: LCLSSVGMKGVPHHV*PKVLFTHEQGQVFH Trigger: GTGAAACACCTGGCCCTGCTCATGGGTAAAGAGAACTTTAGGCCAGACATGGTGTGGCACACCCTTCATCCCAACACTTGAAAGGCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR CCA 90 bp | AACTCCAGCCCCAGGGGCTCTGACACACCCTCTTCAGGAACTACATaGATGTGCACAGATCCGTACAGACACACGCATCTACACACAATT | + |
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Preference number: 1 (lower is better) Translates to: NSSPRGSDTPSSGTT*MCTDPYRHTHLHTI Trigger: AATTGTGTGTAGATGCGTGTGTCTGTACGGATCTGTGCACATCCATGTAGTTCCTGAAGAGGGTGTGTCAGAGCCCCTGGGGCTGGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR TCA 90 bp | CACAGAGAAACCATGTCTGCAGAAATCAAAGGGGTAGAGGGAGTATaGACGACTGATGCTGGATGTGGAAGCAGACAGCTTTCACCCCCA | + |
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Preference number: 1 (lower is better) Translates to: HRETMSAEIKGVEGV*TTDAGCGSRQLSPP Trigger: TGGGGGTGAAAGCTGTCTGCTTCCACATCCAGCATCAGTCGTTCATACTCCCTCTACCCCTTTGATTTCTGCAGACATGGTTTCTCTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR TCA 90 bp | GCTGGTGGGCTAGATGCCTGCAGTGTGCAGCATGGCATAAGTAAGTaGCCTTTCCTCCACAAGGTAGGACATGAGAACAGATTCCTAAAA | + |
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Preference number: 1 (lower is better) Translates to: AGGLDACSVQHGISK*PFLHKVGHENRFLK Trigger: TTTTAGGAATCTGTTCTCATGTCCTACCTTGTGGAGGAAAGGTCACTTACTTATGCCATGCTGCACACTGCAGGCATCTAGCCCACCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR TCA 90 bp | TGTATCCAGTCCTTCACATTGCTGATGTTTATGGGAATGAACAAATaGAACCCTGTGAGAGGACTGGGCCACTACTCGATACTCTTGAGT | + |
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Preference number: 1 (lower is better) Translates to: CIQSFTLLMFMGMNK*NPVRGLGHYSILLS Trigger: ACTCAAGAGTATCGAGTAGTGGCCCAGTCCTCTCACAGGGTTTCATTTGTTCATTCCCATAAACATCAGCAATGTGAAGGACTGGATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR CCA 90 bp | CTAGAGGTTGAAACAAGACGATTTATAATTGGTTCGAGGACAGTCTaGGTTACATGGCAAGACTATTTCCGACAAACAAAAACAAATCCC | + |
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Preference number: 1 (lower is better) Translates to: LEVETRRFIIGSRTV*VTWQDYFRQTKTNP Trigger: GGGATTTGTTTTTGTTTGTCGGAAATAGTCTTGCCATGTAACCCAGACTGTCCTCGAACCAATTATAAATCGTCTTGTTTCAACCTCTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR TCA 90 bp | GGTAGGTATCACGGTGCTCCGGTTGTTAGTAATATTAGGATATTCTaGTTGCAGAAGGTTAATGGGTCTGCAGTTTTGGATAAAATTTGT | + |
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Preference number: 1 (lower is better) Translates to: GRYHGAPVVSNIRIF*LQKVNGSAVLDKIC Trigger: ACAAATTTTATCCAAAACTGCAGACCCATTAACCTTCTGCAATCAGAATATCCTAATATTACTAACAACCGGAGCACCGTGATACCTACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201499.2 |
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| 3UTR GCA 90 bp | GGTATCACGGTGCTCCGGTTGTTAGTAATATTAGGATATTCTGATTaGAGAAGGTTAATGGGTCTGCAGTTTTGGATAAAATTTGTTAAA | + |
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Preference number: 1 (lower is better) Translates to: GITVLRLLVILGYSD*RRLMGLQFWIKFVK Trigger: TTTAACAAATTTTATCCAAAACTGCAGACCCATTAACCTTCTGCAATCAGAATATCCTAATATTACTAACAACCGGAGCACCGTGATACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201499.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGCTCCCTGGGGACCACATACAAATTCAGATATGGTAGCACCTAACTCTCCTCAGCCCCAGGGGCTCTaGCACACCCTCTTCAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LAPWGPHTNSDMVAPNSPQPQGL*HTLFRN Trigger: GTTCCTGAAGAGGGTGTGTCAGAGCCCCTGGGGCTG...AGGAGAGTTAGGTGCTACCATATCTGAATTTGTATGTGGTCCCCAGGGAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR GCA 90 bp | GCCATTAACTCCAGCCCCAGGGGCTCTGACACACCCTCTTCAGGAACTACATGGGAGATCCCCTGCCTCTaGCTTTCAAGTGTTGGGATG | + |
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Preference number: 2 (lower is better) Translates to: AINSSPRGSDTPSSGTTWEIPCL*LSSVGM Trigger: CATCCCAACACTTGAAAGGCAGAGGCAGGGGATCTC...CCATGTAGTTCCTGAAGAGGGTGTGTCAGAGCCCCTGGGGCTGGAGTTAATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR CCA 90 bp | GGTTCTAGCACACCTATGGGACAGCTCACAGCCATTAACTCCAGCCCCAGGGGCGGTTCGAGGACAGTCTaGGTTACATGGCAAGACTAT | + |
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Preference number: 2 (lower is better) Translates to: GSSTPMGQLTAINSSPRGGSRTV*VTWQDY Trigger: ATAGTCTTGCCATGTAACCCAGACTGTCCTCGAACC...GCCCCTGGGGCTGGAGTTAATGGCTGTGAGCTGTCCCATAGGTGTGCTAGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR CCA 90 bp | GCCATTAACTCCAGCCCCAGGGGCTCTGACACACCCTCTTCAGGAACTACATGGGGTTCGAGGACAGTCTaGGTTACATGGCAAGACTAT | + |
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Preference number: 2 (lower is better) Translates to: AINSSPRGSDTPSSGTTWGSRTV*VTWQDY Trigger: ATAGTCTTGCCATGTAACCCAGACTGTCCTCGAACC...CCATGTAGTTCCTGAAGAGGGTGTGTCAGAGCCCCTGGGGCTGGAGTTAATGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTCCCTGGGGACCACATACAAATTCAGATATGGTAGCACCTAACTCTCCTTCGGTCGCAAGCTGGTaGGCTAGATGCCTGCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: LAPWGPHTNSDMVAPNSPSVASW*ARCLQC Trigger: ACACTGCAGGCATCTAGCCCACCAGCTTGCGACCGA...AGGAGAGTTAGGTGCTACCATATCTGAATTTGTATGTGGTCCCCAGGGAGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR TCA 90 bp | GGTTCTAGCACACCTATGGGACAGCTCACAGCCATTAACTCCAGCCCCAGGGGCCTTCTAGTGTGTGTTTaGAGACAGCTGCAATGTACT | + |
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Preference number: 2 (lower is better) Translates to: GSSTPMGQLTAINSSPRGLLVCV*RQLQCT Trigger: AGTACATTGCAGCTGTCTTCAAACACACACTAGAAG...GCCCCTGGGGCTGGAGTTAATGGCTGTGAGCTGTCCCATAGGTGTGCTAGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR TCA 90 bp | CAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCAGATGCCCTCTTCAGTTCTCTTTACCCATaGGCAGGGCCAGGTGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: QQPHGGSQPSVMGSDALFSSLYP*AGPGVS Trigger: TGAAACACCTGGCCCTGCTCATGGGTAAAGAGAACT...GAAGAGGGCATCTGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR CCA 90 bp | CAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCAGATGCCCTCTTCCTGCCTTTCAAGTGTTaGGATGAAGGGTGTGCCACA | + |
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Preference number: 2 (lower is better) Translates to: QQPHGGSQPSVMGSDALFLPFKC*DEGCAT Trigger: TGTGGCACACCCTTCATCCCAACACTTGAAAGGCAG...GAAGAGGGCATCTGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR TCA 90 bp | GCCATTAACTCCAGCCCCAGGGGCTCTGACACACCCTCTTCAGGAACTACATGGTCTAAAGCAAAAATGTaGAGCATGGAGTCCAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: AINSSPRGSDTPSSGTTWSKAKM*SMESRK Trigger: CTTTCTGGACTCCATGCTTCACATTTTTGCTTTAGA...CCATGTAGTTCCTGAAGAGGGTGTGTCAGAGCCCCTGGGGCTGGAGTTAATGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR GCA 90 bp | ACTGCTTTGACCTCCACAAATATACGATGGCATACACTGATGCCCAGAGAACTGGAGATCCCCTGCCTCTaGCTTTCAAGTGTTGGGATG | + |
|
Preference number: 2 (lower is better) Translates to: TALTSTNIRWHTLMPRELEIPCL*LSSVGM Trigger: CATCCCAACACTTGAAAGGCAGAGGCAGGGGATCTC...CAGTTCTCTGGGCATCAGTGTATGCCATCGTATATTTGTGGAGGTCAAAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR TCA 90 bp | ACTGCTTTGACCTCCACAAATATACGATGGCATACACTGATGCCCAGAGAACTGCTACTTGTGAGGAAATaGGGACCATTAGGCAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: TALTSTNIRWHTLMPRELLLVRK*GPLGRG Trigger: CCCTCTGCCTAATGGTCCTCATTTCCTCACAAGTAG...CAGTTCTCTGGGCATCAGTGTATGCCATCGTATATTTGTGGAGGTCAAAGCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR TCA 90 bp | ATCCTCCATCTCAAACAGTGTCAAGATCATTTTCTAGGGGCGAGAGAAACGGCGATGGGAATGAACAAATaGAACCCTGTGAGAGGACTG | + |
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Preference number: 2 (lower is better) Translates to: ILHLKQCQDHFLGARETAMGMNK*NPVRGL Trigger: CAGTCCTCTCACAGGGTTTCATTTGTTCATTCCCAT...CGCCGTTTCTCTCGCCCCTAGAAAATGATCTTGACACTGTTTGAGATGGAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR TCA 90 bp | CTGGTGCCTAACCATAATGTCCAGGATCCAGAAAGAACACTTGGTTGTATAAAAGCCAGTCTTCGGCTATaGAGGCAGGTGTCCCAAACT | + |
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Preference number: 2 (lower is better) Translates to: LVPNHNVQDPERTLGCIKASLRL*RQVSQT Trigger: AGTTTGGGACACCTGCCTTCATAGCCGAAGACTGGC...TTTTATACAACCAAGTGTTCTTTCTGGATCCTGGACATTATGGTTAGGCACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR CAA 90 bp | AGTATATGCACATGTACCAAAGGAAGCCATCTCTTCCAGCCAAACTaGCTCTTCATACAAAACAGTCACACTATGGAGCCATCGGTGACC | + |
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Preference number: 2 (lower is better) Translates to: SICTCTKGSHLFQPN*LFIQNSHTMEPSVT Trigger: GGTCACCGATGGCTCCATAGTGTGACTGTTTTGTATGAAGAGCAAGTTTGGCTGGAAGAGATGGCTTCCTTTGGTACATGTGCATATACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR CAA 90 bp | AACCCTGTGAGAGGACTGGGCCACTACTCGATACTCTTGAGTTTCTaGTACTTTGCCAAGCAAAGATTTTACCGGGCAAGTATATGCACA | + |
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Preference number: 2 (lower is better) Translates to: NPVRGLGHYSILLSF*YFAKQRFYRASICT Trigger: TGTGCATATACTTGCCCGGTAAAATCTTTGCTTGGCAAAGTACAAGAAACTCAAGAGTATCGAGTAGTGGCCCAGTCCTCTCACAGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR TCA 90 bp | AGAAACTCTGAAAGGTTAAAAACTGGCCCAGAACACAGGTGTTCAAAGCAAAGGACAAATGAAACCCTGTaGGAGGACTGGGCCACTACT | + |
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Preference number: 2 (lower is better) Translates to: RNSERLKTGPEHRCSKQRTNETL*EDWATT Trigger: AGTAGTGGCCCAGTCCTCTCACAGGGTTTCATTTGT...CCTTTGCTTTGAACACCTGTGTTCTGGGCCAGTTTTTAACCTTTCAGAGTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTTTGACCTCCACAAATATACGATGGCATACACTGATGCCCAGAGAACTGAAAAATGCTGGGTGGTaGTGGTACACACCTTTAACC | + |
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Preference number: 2 (lower is better) Translates to: TALTSTNIRWHTLMPRELKNAGW*WYTPLT Trigger: GGTTAAAGGTGTGTACCACCACCACCCAGCATTTTT...CAGTTCTCTGGGCATCAGTGTATGCCATCGTATATTTGTGGAGGTCAAAGCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR TCA 90 bp | ACTGCTTTGACCTCCACAAATATACGATGGCATACACTGATGCCCAGAGAACTGAGAAATCACATTAAATaGAAGAAGCCAGGCTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: TALTSTNIRWHTLMPRELRNHIK*KKPGSA Trigger: GGCTGAGCCTGGCTTCTTTCATTTAATGTGATTTCT...CAGTTCTCTGGGCATCAGTGTATGCCATCGTATATTTGTGGAGGTCAAAGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR TCA 90 bp | GTGTGGAAGAAATGGAGGTGTTCCCAGATTCTTTGTGTTTATACAATTCTTTTCTGGGGGAACTGGACATaGCTTCTGGCTCACAGCACA | + |
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Preference number: 2 (lower is better) Translates to: VWKKWRCSQILCVYTILFWGNWT*LLAHST Trigger: TGTGCTGTGAGCCAGAAGTCATGTCCAGTTCCCCCA...GAAAAGAATTGTATAAACACAAAGAATCTGGGAACACCTCCATTTCTTCCACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201876.4 |
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| 3UTR-3UTR CCA 90 bp | AGAAACTCTGAAAGGTTAAAAACTGGCCCAGAACACAGGTGTTCAAAGCAAAGGGTGCCACACCATGTCTaGCCTAAAGTTCTCTTTACC | + |
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Preference number: 2 (lower is better) Translates to: RNSERLKTGPEHRCSKQRVPHHV*PKVLFT Trigger: GGTAAAGAGAACTTTAGGCCAGACATGGTGTGGCAC...CCTTTGCTTTGAACACCTGTGTTCTGGGCCAGTTTTTAACCTTTCAGAGTTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGTGCCTAACCATAATGTCCAGGATCCAGAAAGAACACTTGGTTGTATAAAACTTGATAAGCAAACCTaGCTCCCTGGGGACCACATA | + |
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Preference number: 2 (lower is better) Translates to: LVPNHNVQDPERTLGCIKLDKQT*LPGDHI Trigger: TATGTGGTCCCCAGGGAGCCAGGTTTGCTTATCAAG...TTTTATACAACCAAGTGTTCTTTCTGGATCCTGGACATTATGGTTAGGCACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR CAA 90 bp | TGGCCTAAAGTTCTCTTTACCCATGAGCAGGGCCAGGTGTTTCACTaGCTTAATTTAACCTTTACAGAAGTTTTCTTCACGCGCAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: WPKVLFTHEQGQVFH*LNLTFTEVFFTRSL Trigger: AAGACTGCGCGTGAAGAAAACTTCTGTAAAGGTTAAATTAAGCAAGTGAAACACCTGGCCCTGCTCATGGGTAAAGAGAACTTTAGGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR TCA 90 bp | TATTACACGGTGCTTAGTCTTTGGCAAGAAGCCACTAATGCCAATATATCTTTTAGTTCTCTTTACCCATaGGCAGGGCCAGGTGTTTCA | + |
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Preference number: 2 (lower is better) Translates to: YYTVLSLWQEATNANISFSSLYP*AGPGVS Trigger: TGAAACACCTGGCCCTGCTCATGGGTAAAGAGAACT...AAAAGATATATTGGCATTAGTGGCTTCTTGCCAAAGACTAAGCACCGTGTAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR TCA 90 bp | CTGGTGCCTAACCATAATGTCCAGGATCCAGAAAGAACACTTGGTTGTATAAAACATGGCATAAGTAAGTaGCCTTTCCTCCACAAGGTA | + |
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Preference number: 2 (lower is better) Translates to: LVPNHNVQDPERTLGCIKHGISK*PFLHKV Trigger: TACCTTGTGGAGGAAAGGTCACTTACTTATGCCATG...TTTTATACAACCAAGTGTTCTTTCTGGATCCTGGACATTATGGTTAGGCACCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR GCA 90 bp | ACTGCTTTGACCTCCACAAATATACGATGGCATACACTGATGCCCAGAGAACTGGAGTTTCTTGTACTTTaGCAAGCAAAGATTTTACCG | + |
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Preference number: 2 (lower is better) Translates to: TALTSTNIRWHTLMPRELEFLVL*QAKILP Trigger: CGGTAAAATCTTTGCTTGGCAAAGTACAAGAAACTC...CAGTTCTCTGGGCATCAGTGTATGCCATCGTATATTTGTGGAGGTCAAAGCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTTTGACCTCCACAAATATACGATGGCATACACTGATGCCCAGAGAACTGACCCTTTCATTGCTATaGTTACCCTTTCATTGCTAT | + |
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Preference number: 2 (lower is better) Translates to: TALTSTNIRWHTLMPRELTLSLL*LPFHCY Trigger: ATAGCAATGAAAGGGTAACCATAGCAATGAAAGGGT...CAGTTCTCTGGGCATCAGTGTATGCCATCGTATATTTGTGGAGGTCAAAGCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR CCA 90 bp | TATTACACGGTGCTTAGTCTTTGGCAAGAAGCCACTAATGCCAATATATCTTTTGTGCCACACCATGTCTaGCCTAAAGTTCTCTTTACC | + |
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Preference number: 2 (lower is better) Translates to: YYTVLSLWQEATNANISFVPHHV*PKVLFT Trigger: GGTAAAGAGAACTTTAGGCCAGACATGGTGTGGCAC...AAAAGATATATTGGCATTAGTGGCTTCTTGCCAAAGACTAAGCACCGTGTAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR CCA 90 bp | AAGGTGTGGAAGAAATGGAGGTGTTCCCAGATTCTTTGTGTTTATACAATTCTTGCTCACAGCACACTCTaGGGTCCAGTTAAAGATTTC | + |
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Preference number: 2 (lower is better) Translates to: KVWKKWRCSQILCVYTILAHSTL*GPVKDF Trigger: GAAATCTTTAACTGGACCCCAGAGTGTGCTGTGAGC...AAGAATTGTATAAACACAAAGAATCTGGGAACACCTCCATTTCTTCCACACCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201876.4 |
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| 3UTR-3UTR GCA 90 bp | CTGGTGCCTAACCATAATGTCCAGGATCCAGAAAGAACACTTGGTTGTATAAAATCTTCCAGCCAAACTTaGTCTTCATACAAAACAGTC | + |
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Preference number: 2 (lower is better) Translates to: LVPNHNVQDPERTLGCIKSSSQT*SSYKTV Trigger: GACTGTTTTGTATGAAGAGCAAGTTTGGCTGGAAGA...TTTTATACAACCAAGTGTTCTTTCTGGATCCTGGACATTATGGTTAGGCACCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR GCA 90 bp | GTTGAGTACAATTTCTTGCTATGGTTACCCTTTCATTGCTATGGCTACCCTTTCTCTTCCAGCCAAACTTaGTCTTCATACAAAACAGTC | + |
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Preference number: 2 (lower is better) Translates to: VEYNFLLWLPFHCYGYPFSSSQT*SSYKTV Trigger: GACTGTTTTGTATGAAGAGCAAGTTTGGCTGGAAGA...GAAAGGGTAGCCATAGCAATGAAAGGGTAACCATAGCAAGAAATTGTACTCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR GCA 90 bp | CTGGTGCCTAACCATAATGTCCAGGATCCAGAAAGAACACTTGGTTGTATAAAACCTGCAGAACATTTATaGAATGTTCTCACTGATGAG | + |
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Preference number: 2 (lower is better) Translates to: LVPNHNVQDPERTLGCIKPAEHL*NVLTDE Trigger: CTCATCAGTGAGAACATTGCATAAATGTTCTGCAGG...TTTTATACAACCAAGTGTTCTTTCTGGATCCTGGACATTATGGTTAGGCACCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR GCA 90 bp | GTTGAGTACAATTTCTTGCTATGGTTACCCTTTCATTGCTATGGCTACCCTTTCCCTGCAGAACATTTATaGAATGTTCTCACTGATGAG | + |
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Preference number: 2 (lower is better) Translates to: VEYNFLLWLPFHCYGYPFPAEHL*NVLTDE Trigger: CTCATCAGTGAGAACATTGCATAAATGTTCTGCAGG...GAAAGGGTAGCCATAGCAATGAAAGGGTAACCATAGCAAGAAATTGTACTCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR TCA 90 bp | ACTTGGTTGTATAAAATTTTACTACCTAAGAGCCCTGGAAGATGGTTCAATAGACATGGCATAAGTAAGTaGCCTTTCCTCCACAAGGTA | + |
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Preference number: 2 (lower is better) Translates to: TWLYKILLPKSPGRWFNRHGISK*PFLHKV Trigger: TACCTTGTGGAGGAAAGGTCACTTACTTATGCCATG...TCTATTGAACCATCTTCCAGGGCTCTTAGGTAGTAAAATTTTATACAACCAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR-3UTR GCA 90 bp | CTGGTGCCTAACCATAATGTCCAGGATCCAGAAAGAACACTTGGTTGTATAAAACTAACCACCAATACCTaGAGAACATTTATGCAATGT | + |
|
Preference number: 2 (lower is better) Translates to: LVPNHNVQDPERTLGCIKLTTNT*RTFMQC Trigger: ACATTGCATAAATGTTCTGCAGGTATTGGTGGTTAG...TTTTATACAACCAAGTGTTCTTTCTGGATCCTGGACATTATGGTTAGGCACCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR-3UTR TCA 90 bp | TATTACACGGTGCTTAGTCTTTGGCAAGAAGCCACTAATGCCAATATATCTTTTTCTAAAGCAAAAATGTaGAGCATGGAGTCCAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: YYTVLSLWQEATNANISFSKAKM*SMESRK Trigger: CTTTCTGGACTCCATGCTTCACATTTTTGCTTTAGA...AAAAGATATATTGGCATTAGTGGCTTCTTGCCAAAGACTAAGCACCGTGTAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR-3UTR CCA 90 bp | GTTGAGTACAATTTCTTGCTATGGTTACCCTTTCATTGCTATGGCTACCCTTTCGAGGAAATATTGTGTTaGTATAGAAACTCTGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: VEYNFLLWLPFHCYGYPFEEILC*YRNSER Trigger: CCTTTCAGAGTTTCTATACCAACACAATATTTCCTC...GAAAGGGTAGCCATAGCAATGAAAGGGTAACCATAGCAAGAAATTGTACTCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR-3UTR CCA 90 bp | TATTACACGGTGCTTAGTCTTTGGCAAGAAGCCACTAATGCCAATATATCTTTTGAACAGCTTGTGACATaGAAACAACTTCTAAATGTG | + |
|
Preference number: 2 (lower is better) Translates to: YYTVLSLWQEATNANISFEQLVT*KQLLNV Trigger: CACATTTAGAAGTTGTTTCCATGTCACAAGCTGTTC...AAAAGATATATTGGCATTAGTGGCTTCTTGCCAAAGACTAAGCACCGTGTAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR-3UTR TCA 90 bp | ACTTGGTTGTATAAAATTTTACTACCTAAGAGCCCTGGAAGATGGTTCAATAGAAAACGTAAAACATCCTaGGTCATGAAAGTGAGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: TWLYKILLPKSPGRWFNRKRKTS*VMKVSK Trigger: TTTGCTCACTTTCATGACTCAGGATGTTTTACGTTT...TCTATTGAACCATCTTCCAGGGCTCTTAGGTAGTAAAATTTTATACAACCAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR-3UTR CCA 90 bp | ACTTGGTTGTATAAAATTTTACTACCTAAGAGCCCTGGAAGATGGTTCAATAGAGAGGAAATATTGTGTTaGTATAGAAACTCTGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: TWLYKILLPKSPGRWFNREEILC*YRNSER Trigger: CCTTTCAGAGTTTCTATACCAACACAATATTTCCTC...TCTATTGAACCATCTTCCAGGGCTCTTAGGTAGTAAAATTTTATACAACCAAGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR GCA 72 bp | GCGGGGGCTGGAGAGATGGCAGTAAAGAGCACTGACTaGTCTGTCAGAGGTCCTGAGTTCAGTTCCCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: AGAGEMAVKSTD*SVRGPEFSSQQ Trigger: TTGCTGGGAACTGAACTCAGGACCTCTGACAGAGCAGTCAGTGCTCTTTACTGCCATCTCTCCAGCCCCCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR CCA 72 bp | CCTTTAGGGAGATGGGTGTGTGTGTGTGTGCGCGCATaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: PLGRWVCVCVRA*CVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACACACCATGCGCGCACACACACACACACCCATCTCCCTAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR TCA 72 bp | GTGACCGGAAACTCAGTGTGTAGATCAGGTTGGCCCTaGATTCTGAGATCCCCTGCCTCTGCCTTTCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: VTGNSVCRSGWP*ILRSPASAFQV Trigger: CACTTGAAAGGCAGAGGCAGGGGATCTCAGAATTCAGGGCCAACCTGATCTACACACTGAGTTTCCGGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR CCA 72 bp | TCAAGTGTTGGGATGAAGGGTGTGCCACACCATGTCTaGCCTAAAGTTCTCTTTACCCATGAGCAGGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SSVGMKGVPHHV*PKVLFTHEQGQ Trigger: CTGGCCCTGCTCATGGGTAAAGAGAACTTTAGGCCAGACATGGTGTGGCACACCCTTCATCCCAACACTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR-3UTR CAA 90 bp | GGTTCTAGCACACCTATGGGACAGCTCACAGCCATTAACTCCAGCCCCAGGGGCCTCTTCCAGCCAAACTaGCTCTTCATACAAAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: GSSTPMGQLTAINSSPRGLFQPN*LFIQNS Trigger: ACTGTTTTGTATGAAGAGCAAGTTTGGCTGGAAGAG...GCCCCTGGGGCTGGAGTTAATGGCTGTGAGCTGTCCCATAGGTGTGCTAGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR GCA 72 bp | GGCTCTGACACACCCTCTTCAGGAACTACATGGATGTaGACAGATCCGTACAGACACACGCATCTACACACA | + |
|
Preference number: 3 (lower is better) Translates to: GSDTPSSGTTWM*TDPYRHTHLHT Trigger: TGTGTGTAGATGCGTGTGTCTGTACGGATCTGTGCACATCCATGTAGTTCCTGAAGAGGGTGTGTCAGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR-3UTR CAA 90 bp | GGTTCTAGCACACCTATGGGACAGCTCACAGCCATTAACTCCAGCCCCAGGGGCATACTCTTGAGTTTCTaGTACTTTGCCAAGCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: GSSTPMGQLTAINSSPRGILLSF*YFAKQR Trigger: TCTTTGCTTGGCAAAGTACAAGAAACTCAAGAGTAT...GCCCCTGGGGCTGGAGTTAATGGCTGTGAGCTGTCCCATAGGTGTGCTAGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR GCA 72 bp | TCTAGGATGGCCCGTACGACACAGAGAAACCATGTCTaGAGAAATCAAAGGGGTAGAGGGAGTATGAACGAC | + |
|
Preference number: 3 (lower is better) Translates to: SRMARTTQRNHV*RNQRGRGSMND Trigger: GTCGTTCATACTCCCTCTACCCCTTTGATTTCTGCAGACATGGTTTCTCTGTGTCGTACGGGCCATCCTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR GCA 72 bp | AGACCAGGTTGGCCTCAAACTTACAGAGATTCAACCTaGCTCTGTCTCTACCTCCCAAGTGCTCGGATTAAG | + |
|
Preference number: 3 (lower is better) Translates to: RPGWPQTYRDST*LCLYLPSARIK Trigger: CTTAATCCGAGCACTTGGGAGGTAGAGACAGAGGCAGGTTGAATCTCTGTAAGTTTGAGGCCAACCTGGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR CCA 72 bp | TCTGGCTGGCCTGGACCTCATTTAAGTAGACCAGGTTaGCCTCAAACTTACAGAGATTCAACCTGCCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: SGWPGPHLSRPG*PQTYRDSTCLC Trigger: ACAGAGGCAGGTTGAATCTCTGTAAGTTTGAGGCCAACCTGGTCTACTTAAATGAGGTCCAGGCCAGCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR TCA 72 bp | ACCATGTCTGCAGAAATCAAAGGGGTAGAGGGAGTATaGACGACTGATGCTGGATGTGGAAGCAGACAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: TMSAEIKGVEGV*TTDAGCGSRQL Trigger: AAGCTGTCTGCTTCCACATCCAGCATCAGTCGTTCATACTCCCTCTACCCCTTTGATTTCTGCAGACATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR TCA 72 bp | CAAAAGAGAGACTCTAAGGGTCTACTTGTGAGGAAATaGGGACCATTAGGCAGAGGGAAGGGGTTGGGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: QKRDSKGLLVRK*GPLGRGKGLGD Trigger: ATCTCCCAACCCCTTCCCTCTGCCTAATGGTCCTCATTTCCTCACAAGTAGACCCTTAGAGTCTCTCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR TCA 72 bp | CTAGATGCCTGCAGTGTGCAGCATGGCATAAGTAAGTaGCCTTTCCTCCACAAGGTAGGACATGAGAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LDACSVQHGISK*PFLHKVGHENR Trigger: TCTGTTCTCATGTCCTACCTTGTGGAGGAAAGGTCACTTACTTATGCCATGCTGCACACTGCAGGCATCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR GCA 72 bp | GCTCACAGCACACTCTGGGGTCCAGTTAAAGATTTCTaGACGCTGATGACCTTCGGTATATTCACAGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: AHSTLWGPVKDF*TLMTFGIFTES Trigger: AGACTCTGTGAATATACCGAAGGTCATCAGCGTGCAGAAATCTTTAACTGGACCCCAGAGTGTGCTGTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201876.4 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCAGATGCCCTCTTCGGCCAGGTGTTTCACTaGCTTAATTTAACCTTTACA | + |
|
Preference number: 3 (lower is better) Translates to: QQPHGGSQPSVMGSDALFGQVFH*LNLTFT Trigger: TGTAAAGGTTAAATTAAGCAAGTGAAACACCTGGCC...GAAGAGGGCATCTGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR TCA 72 bp | ACACAGGTGTTCAAAGCAAAGGCCAGTCTTCGGCTATaGAGGCAGGTGTCCCAAACTAGGACAAAAGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TQVFKAKASLRL*RQVSQTRTKEK Trigger: CTTTTCTTTTGTCCTAGTTTGGGACACCTGCCTTCATAGCCGAAGACTGGCCTTTGCTTTGAACACCTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR-3UTR CAA 90 bp | ATCCTCCATCTCAAACAGTGTCAAGATCATTTTCTAGGGGCGAGAGAAACGGCGCACTACTCGATACTCTaGAGTTTCTTGTACTTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: ILHLKQCQDHFLGARETAHYSIL*SFLYFA Trigger: GGCAAAGTACAAGAAACTCAAGAGTATCGAGTAGTG...CGCCGTTTCTCTCGCCCCTAGAAAATGATCTTGACACTGTTTGAGATGGAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR-3UTR CAA 90 bp | ATCCTCCATCTCAAACAGTGTCAAGATCATTTTCTAGGGGCGAGAGAAACGGCGTCTTCTAGTGTGTGTTaGAAGACAGCTGCAATGTAC | + |
|
Preference number: 3 (lower is better) Translates to: ILHLKQCQDHFLGARETASSSVC*KTAAMY Trigger: GTACATTGCAGCTGTCTTCAAACACACACTAGAAGA...CGCCGTTTCTCTCGCCCCTAGAAAATGATCTTGACACTGTTTGAGATGGAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCTTTGACCTCCACAAATATACGATGGCATACACTGATGCCCAGAGAACTGCTCTTCCAGCCAAACTaGCTCTTCATACAAAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: TALTSTNIRWHTLMPRELLFQPN*LFIQNS Trigger: ACTGTTTTGTATGAAGAGCAAGTTTGGCTGGAAGAG...CAGTTCTCTGGGCATCAGTGTATGCCATCGTATATTTGTGGAGGTCAAAGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCTCCCTGGGGACCACATACAAATTCAGATATGGTAGCACCTAACTCTCCTGTTGAGTACAATTTCTaGCTATGGTTACCCTTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LAPWGPHTNSDMVAPNSPVEYNF*LWLPFH Trigger: ATGAAAGGGTAACCATAGCAAGAAATTGTACTCAAC...AGGAGAGTTAGGTGCTACCATATCTGAATTTGTATGTGGTCCCCAGGGAGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR TCA 72 bp | TCCTTCACATTGCTGATGTTTATGGGAATGAACAAATaGAACCCTGTGAGAGGACTGGGCCACTACTCGATA | + |
|
Preference number: 3 (lower is better) Translates to: SFTLLMFMGMNK*NPVRGLGHYSI Trigger: TATCGAGTAGTGGCCCAGTCCTCTCACAGGGTTTCATTTGTTCATTCCCATAAACATCAGCAATGTGAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR GCA 72 bp | TACTTTGCCAAGCAAAGATTTTACCGGGCAAGTATATaGACATGTACCAAAGGAAGCCATCTCTTCCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: YFAKQRFYRASI*TCTKGSHLFQP Trigger: TGGCTGGAAGAGATGGCTTCCTTTGGTACATGTGCATATACTTGCCCGGTAAAATCTTTGCTTGGCAAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR GCA 72 bp | GGGCCACTACTCGATACTCTTGAGTTTCTTGTACTTTaGCAAGCAAAGATTTTACCGGGCAAGTATATGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GPLLDTLEFLVL*QAKILPGKYMH Trigger: GTGCATATACTTGCCCGGTAAAATCTTTGCTTGGCAAAGTACAAGAAACTCAAGAGTATCGAGTAGTGGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR CCA 72 bp | TACCCTTTCATTGCTATGGCTACCCTTTCATTGCTATaGTTACCCTTTCATTGCTATGGCTACCCCTTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: YPFIAMATLSLL*LPFHCYGYPLH Trigger: ATGCAAGGGGTAGCCATAGCAATGAAAGGGTAACCATAGCAATGAAAGGGTAGCCATAGCAATGAAAGGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR CCA 72 bp | ATTCCTAAAACTGCTTTGACCTCCACAAATATACGATaGCATACACTGATGCCCAGAGAACTGAAGGGAACT | + |
|
Preference number: 3 (lower is better) Translates to: IPKTALTSTNIR*HTLMPRELKGT Trigger: AGTTCCCTTCAGTTCTCTGGGCATCAGTGTATGCCATCGTATATTTGTGGAGGTCAAAGCAGTTTTAGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR-3UTR CAA 90 bp | AGAAACTCTGAAAGGTTAAAAACTGGCCCAGAACACAGGTGTTCAAAGCAAAGGTCTTCTAGTGTGTGTTaGAAGACAGCTGCAATGTAC | + |
|
Preference number: 3 (lower is better) Translates to: RNSERLKTGPEHRCSKQRSSSVC*KTAAMY Trigger: GTACATTGCAGCTGTCTTCAAACACACACTAGAAGA...CCTTTGCTTTGAACACCTGTGTTCTGGGCCAGTTTTTAACCTTTCAGAGTTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR TCA 72 bp | AAGTTGTCCGTAAATCCAACAAAACGTAAAACATCCTaGGTCATGAAAGTGAGCAAAGTACCCTCTCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: KLSVNPTKRKTS*VMKVSKVPSPH Trigger: GTGAGGAGAGGGTACTTTGCTCACTTTCATGACTCAGGATGTTTTACGTTTTGTTGGATTTACGGACAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR TCA 72 bp | CCCTTTCATTGCTATGGCTACCCCTTGCATTGGTTATaGGAACATAACCAATGGGTAATTAGGAACATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: PFHCYGYPLHWL*EHNQWVIRNIC Trigger: GCAAATGTTCCTAATTACCCATTGGTTATGTTCTCATAACCAATGCAAGGGGTAGCCATAGCAATGAAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR TCA 72 bp | CACGGTGCTCCGGTTGTTAGTAATATTAGGATATTCTaGTTGCAGAAGGTTAATGGGTCTGCAGTTTTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: HGAPVVSNIRIF*LQKVNGSAVLD Trigger: ATCCAAAACTGCAGACCCATTAACCTTCTGCAATCAGAATATCCTAATATTACTAACAACCGGAGCACCGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201499.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTGCCTAACCATAATGTCCAGGATCCAGAAAGAACACTTGGTTGTATAAAACACTACTCGATACTCTaGAGTTTCTTGTACTTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LVPNHNVQDPERTLGCIKHYSIL*SFLYFA Trigger: GGCAAAGTACAAGAAACTCAAGAGTATCGAGTAGTG...TTTTATACAACCAAGTGTTCTTTCTGGATCCTGGACATTATGGTTAGGCACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR CCA 72 bp | GTACAATTTCTTGCTATGGTTACCCTTTCATTGCTATaGCTACCCTTTCATTGCTATGGTTACCCTTTCATT | + |
|
Preference number: 3 (lower is better) Translates to: VQFLAMVTLSLL*LPFHCYGYPFI Trigger: AATGAAAGGGTAACCATAGCAATGAAAGGGTAGCCATAGCAATGAAAGGGTAACCATAGCAAGAAATTGTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR TCA 72 bp | GACCTGGAAATGCCTAAAGTTTCATGTTCAATAGGTTaGGTACAATTTCTTGCTATGGTTACCCTTTCATTG | + |
|
Preference number: 3 (lower is better) Translates to: DLEMPKVSCSIG*VQFLAMVTLSL Trigger: CAATGAAAGGGTAACCATAGCAAGAAATTGTACTCAACCTATTGAACATGAAACTTTAGGCATTTCCAGGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR-3UTR CAA 90 bp | TATTACACGGTGCTTAGTCTTTGGCAAGAAGCCACTAATGCCAATATATCTTTTATACTCTTGAGTTTCTaGTACTTTGCCAAGCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: YYTVLSLWQEATNANISFILLSF*YFAKQR Trigger: TCTTTGCTTGGCAAAGTACAAGAAACTCAAGAGTAT...AAAAGATATATTGGCATTAGTGGCTTCTTGCCAAAGACTAAGCACCGTGTAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR CCA 72 bp | AGACTAGCAACCAATATATTGGAGGAAATATTGTGTTaGTATAGAAACTCTGAAAGGTTAAAAACTGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RLATNILEEILC*YRNSERLKTGP Trigger: TGGGCCAGTTTTTAACCTTTCAGAGTTTCTATACCAACACAATATTTCCTCCAATATATTGGTTGCTAGTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| 3UTR CCA 72 bp | AGATTGACTATGATTTATTACACGGTGCTTAGTCTTTaGCAAGAAGCCACTAATGCCAATATATCTTTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: RLTMIYYTVLSL*QEATNANISFS Trigger: ACTAAAAGATATATTGGCATTAGTGGCTTCTTGCCAAAGACTAAGCACCGTGTAATAAATCATAGTCAATCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| CDS-3UTR CCA 90 bp | GGTTCTAGCACACCTATGGGACAGCTCACAGCCATTAACTCCAGCCCCAGGGGCGCTCACAGCACACTCTaGGGTCCAGTTAAAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSSTPMGQLTAINSSPRGAHSTL*GPVKDF Trigger: GAAATCTTTAACTGGACCCCAGAGTGTGCTGTGAGC...GCCCCTGGGGCTGGAGTTAATGGCTGTGAGCTGTCCCATAGGTGTGCTAGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| CDS-3UTR TCA 90 bp | ATCCTCCATCTCAAACAGTGTCAAGATCATTTTCTAGGGGCGAGAGAAACGGCGTGGGGGAACTGGACATaGCTTCTGGCTCACAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: ILHLKQCQDHFLGARETAWGNWT*LLAHST Trigger: TGTGCTGTGAGCCAGAAGTCATGTCCAGTTCCCCCA...CGCCGTTTCTCTCGCCCCTAGAAAATGATCTTGACACTGTTTGAGATGGAGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| CDS-3UTR TCA 90 bp | GGTTCTAGCACACCTATGGGACAGCTCACAGCCATTAACTCCAGCCCCAGGGGCTTCTTTCATGTGACTTaGCATATCGGAAAGAACGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSSTPMGQLTAINSSPRGFFHVT*HIGKNG Trigger: TCCGTTCTTTCCGATATGTCAAGTCACATGAAAGAA...GCCCCTGGGGCTGGAGTTAATGGCTGTGAGCTGTCCCATAGGTGTGCTAGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| CDS-3UTR CCA 90 bp | GCCATTAACTCCAGCCCCAGGGGCTCTGACACACCCTCTTCAGGAACTACATGGATTCTTTCATGTATTTaGAGGGAGCTAGGAAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AINSSPRGSDTPSSGTTWILSCI*RELGKG Trigger: CCCCTTTCCTAGCTCCCTCCAAATACATGAAAGAAT...CCATGTAGTTCCTGAAGAGGGTGTGTCAGAGCCCCTGGGGCTGGAGTTAATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| CDS-3UTR TCA 90 bp | GCCATTAACTCCAGCCCCAGGGGCTCTGACACACCCTCTTCAGGAACTACATGGAAGAGCTATAATAACTaGAGGCTTTCCCACATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AINSSPRGSDTPSSGTTWKSYNN*RLSHIL Trigger: CAGAATGTGGGAAAGCCTTCAGTTATTATAGCTCTT...CCATGTAGTTCCTGAAGAGGGTGTGTCAGAGCCCCTGGGGCTGGAGTTAATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
||
| CDS-3UTR CCA 90 bp | CAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCAGATGCCCTCTTCGCTCACAGCACACTCTaGGGTCCAGTTAAAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: QQPHGGSQPSVMGSDALFAHSTL*GPVKDF Trigger: GAAATCTTTAACTGGACCCCAGAGTGTGCTGTGAGC...GAAGAGGGCATCTGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR CCA 90 bp | CAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCAGATGCCCTCTTCATCGTTCTGACTGGATaGGAGACACCTGGAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QQPHGGSQPSVMGSDALFIVLTG*ETPGIF Trigger: GAAGATTCCAGGTGTCTCCCATCCAGTCAGAACGAT...GAAGAGGGCATCTGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR TCA 90 bp | CAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCAGATGCCCTCTTCGGGTTCGAGCCACTGTaGATTACTTCATGTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QQPHGGSQPSVMGSDALFGFEPL*ITSCLL Trigger: AAGAAGACATGAAGTAATTCACAGTGGCTCGAACCC...GAAGAGGGCATCTGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR TCA 90 bp | GTTCTCTTTACCCATGAGCAGGGCCAGGTGTTTCACTTGCTTAATTTAACCTTTTGGGGGAACTGGACATaGCTTCTGGCTCACAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VLFTHEQGQVFHLLNLTFWGNWT*LLAHST Trigger: TGTGCTGTGAGCCAGAAGTCATGTCCAGTTCCCCCA...AAAGGTTAAATTAAGCAAGTGAAACACCTGGCCCTGCTCATGGGTAAAGAGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR TCA 90 bp | CTGGCTCCCTGGGGACCACATACAAATTCAGATATGGTAGCACCTAACTCTCCTTACTTAACGGAGCTGTaGCTAGTGAAGGCTTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: LAPWGPHTNSDMVAPNSPYLTEL*LVKALP Trigger: TGGTAAAGCCTTCACTAGTCACAGCTCCGTTAAGTA...AGGAGAGTTAGGTGCTACCATATCTGAATTTGTATGTGGTCCCCAGGGAGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR TCA 90 bp | ACTGCTTTGACCTCCACAAATATACGATGGCATACACTGATGCCCAGAGAACTGCTTGACGAGAAGACCTaGAGGCTTTCCCACATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TALTSTNIRWHTLMPRELLDEKT*RLSHIV Trigger: AACAATGTGGGAAAGCCTTCAGGTCTTCTCGTCAAG...CAGTTCTCTGGGCATCAGTGTATGCCATCGTATATTTGTGGAGGTCAAAGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR TCA 90 bp | ATCCTCCATCTCAAACAGTGTCAAGATCATTTTCTAGGGGCGAGAGAAACGGCGGTGGCTTCTTTCATGTaGCTTGACATATCGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILHLKQCQDHFLGARETAVASFM*LDISER Trigger: TCTTTCCGATATGTCAAGTCACATGAAAGAAGCCAC...CGCCGTTTCTCTCGCCCCTAGAAAATGATCTTGACACTGTTTGAGATGGAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR GCA 90 bp | CTGGCTCCCTGGGGACCACATACAAATTCAGATATGGTAGCACCTAACTCTCCTAAAACCTTCTCACATTaGAAACACACGAAGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LAPWGPHTNSDMVAPNSPKTFSH*KHTKSC Trigger: GCAACTCTTCGTGTGTTTGCAATGTGAGAAGGTTTT...AGGAGAGTTAGGTGCTACCATATCTGAATTTGTATGTGGTCCCCAGGGAGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR CCA 90 bp | ATCCTCCATCTCAAACAGTGTCAAGATCATTTTCTAGGGGCGAGAGAAACGGCGAAGGTGTGGAAGAAATaGAGGTGTTCCCAGATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILHLKQCQDHFLGARETAKVWKK*RCSQIL Trigger: AAGAATCTGGGAACACCTCCATTTCTTCCACACCTT...CGCCGTTTCTCTCGCCCCTAGAAAATGATCTTGACACTGTTTGAGATGGAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR CCA 90 bp | GTTCTCTTTACCCATGAGCAGGGCCAGGTGTTTCACTTGCTTAATTTAACCTTTAGTGCGGTTCTCCACTaGAGCTCTTTCCATCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLFTHEQGQVFHLLNLTFSAVLH*SSFHRS Trigger: AGAACGATGGAAAGAGCTCCAGTGGAGAACCGCACT...AAAGGTTAAATTAAGCAAGTGAAACACCTGGCCCTGCTCATGGGTAAAGAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR CCA 90 bp | CAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCAGATGCCCTCTTCAATCTGAACTTGTTTTaGAGACCTAAAGGTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QQPHGGSQPSVMGSDALFNLNLF*RPKGFP Trigger: GGGAAAACCTTTAGGTCTCCAAAACAAGTTCAGATT...GAAGAGGGCATCTGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR CAA 72 bp | AGAGGACTGGGCCACTACTCGATACTCTTGAGTTTCTaGTACTTTGCCAAGCAAAGATTTTACCGGGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGLGHYSILLSF*YFAKQRFYRAS Trigger: ACTTGCCCGGTAAAATCTTTGCTTGGCAAAGTACAAGAAACTCAAGAGTATCGAGTAGTGGCCCAGTCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR TCA 90 bp | ACTGCTTTGACCTCCACAAATATACGATGGCATACACTGATGCCCAGAGAACTGGAATCTTCCTTACAGTaGCTAGTTTCAGGTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TALTSTNIRWHTLMPRELESSLQ*LVSGFS Trigger: GGAGAAACCTGAAACTAGTCACTGTAAGGAAGATTC...CAGTTCTCTGGGCATCAGTGTATGCCATCGTATATTTGTGGAGGTCAAAGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR TCA 90 bp | GTTCTCTTTACCCATGAGCAGGGCCAGGTGTTTCACTTGCTTAATTTAACCTTTCTTGACGAGAAGACCTaGAGGCTTTCCCACATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VLFTHEQGQVFHLLNLTFLDEKT*RLSHIV Trigger: AACAATGTGGGAAAGCCTTCAGGTCTTCTCGTCAAG...AAAGGTTAAATTAAGCAAGTGAAACACCTGGCCCTGCTCATGGGTAAAGAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR TCA 90 bp | ATCCTCCATCTCAAACAGTGTCAAGATCATTTTCTAGGGGCGAGAGAAACGGCGTTCTTTCATGTGACTTaGCATATCGGAAAGAACGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILHLKQCQDHFLGARETAFFHVT*HIGKNG Trigger: TCCGTTCTTTCCGATATGTCAAGTCACATGAAAGAA...CGCCGTTTCTCTCGCCCCTAGAAAATGATCTTGACACTGTTTGAGATGGAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR CCA 90 bp | GTTCTCTTTACCCATGAGCAGGGCCAGGTGTTTCACTTGCTTAATTTAACCTTTTGGATGGGAGACACCTaGAATCTTCCTTACAGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLFTHEQGQVFHLLNLTFWMGDT*NLPYSD Trigger: GTCACTGTAAGGAAGATTCCAGGTGTCTCCCATCCA...AAAGGTTAAATTAAGCAAGTGAAACACCTGGCCCTGCTCATGGGTAAAGAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR CCA 90 bp | CTGGTGCCTAACCATAATGTCCAGGATCCAGAAAGAACACTTGGTTGTATAAAAAGTGCGGTTCTCCACTaGAGCTCTTTCCATCGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVPNHNVQDPERTLGCIKSAVLH*SSFHRS Trigger: AGAACGATGGAAAGAGCTCCAGTGGAGAACCGCACT...TTTTATACAACCAAGTGTTCTTTCTGGATCCTGGACATTATGGTTAGGCACCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR CAA 72 bp | AACCCTGTGAGAGGACTGGGCCACTACTCGATACTCTaGAGTTTCTTGTACTTTGCCAAGCAAAGATTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: NPVRGLGHYSIL*SFLYFAKQRFY Trigger: GTAAAATCTTTGCTTGGCAAAGTACAAGAAACTCAAGAGTATCGAGTAGTGGCCCAGTCCTCTCACAGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR TCA 90 bp | GTTCTCTTTACCCATGAGCAGGGCCAGGTGTTTCACTTGCTTAATTTAACCTTTGGGTTCGAGCCACTGTaGATTACTTCATGTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLFTHEQGQVFHLLNLTFGFEPL*ITSCLL Trigger: AAGAAGACATGAAGTAATTCACAGTGGCTCGAACCC...AAAGGTTAAATTAAGCAAGTGAAACACCTGGCCCTGCTCATGGGTAAAGAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR CCA 90 bp | CTGGTGCCTAACCATAATGTCCAGGATCCAGAAAGAACACTTGGTTGTATAAAAATCGTTCTGACTGGATaGGAGACACCTGGAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LVPNHNVQDPERTLGCIKIVLTG*ETPGIF Trigger: GAAGATTCCAGGTGTCTCCCATCCAGTCAGAACGAT...TTTTATACAACCAAGTGTTCTTTCTGGATCCTGGACATTATGGTTAGGCACCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR TCA 90 bp | ACTGCTTTGACCTCCACAAATATACGATGGCATACACTGATGCCCAGAGAACTGTCTTTTCCATATTCCTaGATGGCATACAGTTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TALTSTNIRWHTLMPRELSFPYS*MAYSLC Trigger: ACACAAACTGTATGCCATTCAGGAATATGGAAAAGA...CAGTTCTCTGGGCATCAGTGTATGCCATCGTATATTTGTGGAGGTCAAAGCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| 3UTR CAA 72 bp | GTTCTCTTTACCCATGAGCAGGGCCAGGTGTTTCACTaGCTTAATTTAACCTTTACAGAAGTTTTCTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: VLFTHEQGQVFH*LNLTFTEVFFT Trigger: CGTGAAGAAAACTTCTGTAAAGGTTAAATTAAGCAAGTGAAACACCTGGCCCTGCTCATGGGTAAAGAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR TCA 90 bp | CTGGTGCCTAACCATAATGTCCAGGATCCAGAAAGAACACTTGGTTGTATAAAAGTGGCTTCTTTCATGTaGCTTGACATATCGGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVPNHNVQDPERTLGCIKVASFM*LDISER Trigger: TCTTTCCGATATGTCAAGTCACATGAAAGAAGCCAC...TTTTATACAACCAAGTGTTCTTTCTGGATCCTGGACATTATGGTTAGGCACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR GCA 90 bp | CTGGTGCCTAACCATAATGTCCAGGATCCAGAAAGAACACTTGGTTGTATAAAAAAAACCTTCTCACATTaGAAACACACGAAGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVPNHNVQDPERTLGCIKKTFSH*KHTKSC Trigger: GCAACTCTTCGTGTGTTTGCAATGTGAGAAGGTTTT...TTTTATACAACCAAGTGTTCTTTCTGGATCCTGGACATTATGGTTAGGCACCAG 40% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR CCA 90 bp | AGAAACTCTGAAAGGTTAAAAACTGGCCCAGAACACAGGTGTTCAAAGCAAAGGAATCTGAACTTGTTTTaGAGACCTAAAGGTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RNSERLKTGPEHRCSKQRNLNLF*RPKGFP Trigger: GGGAAAACCTTTAGGTCTCCAAAACAAGTTCAGATT...CCTTTGCTTTGAACACCTGTGTTCTGGGCCAGTTTTTAACCTTTCAGAGTTTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR CCA 90 bp | TATTACACGGTGCTTAGTCTTTGGCAAGAAGCCACTAATGCCAATATATCTTTTAAGGTGTGGAAGAAATaGAGGTGTTCCCAGATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YYTVLSLWQEATNANISFKVWKK*RCSQIL Trigger: AAGAATCTGGGAACACCTCCATTTCTTCCACACCTT...AAAAGATATATTGGCATTAGTGGCTTCTTGCCAAAGACTAAGCACCGTGTAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR CCA 90 bp | ACTTGGTTGTATAAAATTTTACTACCTAAGAGCCCTGGAAGATGGTTCAATAGAATTCTTTCATGTATTTaGAGGGAGCTAGGAAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TWLYKILLPKSPGRWFNRILSCI*RELGKG Trigger: CCCCTTTCCTAGCTCCCTCCAAATACATGAAAGAAT...TCTATTGAACCATCTTCCAGGGCTCTTAGGTAGTAAAATTTTATACAACCAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR TCA 90 bp | ACTTGGTTGTATAAAATTTTACTACCTAAGAGCCCTGGAAGATGGTTCAATAGATCTTTTCCATATTCCTaGATGGCATACAGTTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TWLYKILLPKSPGRWFNRSFPYS*MAYSLC Trigger: ACACAAACTGTATGCCATTCAGGAATATGGAAAAGA...TCTATTGAACCATCTTCCAGGGCTCTTAGGTAGTAAAATTTTATACAACCAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR CAA 90 bp | GCCATTAACTCCAGCCCCAGGGGCTCTGACACACCCTCTTCAGGAACTACATGGCAAACACACGAAGAGTaGCTCTCCTGTGTGAGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: AINSSPRGSDTPSSGTTWQTHEE*LSCVSS Trigger: CGAACTCACACAGGAGAGCAACTCTTCGTGTGTTTG...CCATGTAGTTCCTGAAGAGGGTGTGTCAGAGCCCCTGGGGCTGGAGTTAATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR CAA 90 bp | CAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCAGATGCCCTCTTCGATTCTTTCATGTATTaGGAGGGAGCTAGGAAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QQPHGGSQPSVMGSDALFDSFMY*EGARKG Trigger: CCCTTTCCTAGCTCCCTCCAAATACATGAAAGAATC...GAAGAGGGCATCTGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR CAA 90 bp | ACTGCTTTGACCTCCACAAATATACGATGGCATACACTGATGCCCAGAGAACTGCAAACACACGAAGAGTaGCTCTCCTGTGTGAGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: TALTSTNIRWHTLMPRELQTHEE*LSCVSS Trigger: CGAACTCACACAGGAGAGCAACTCTTCGTGTGTTTG...CAGTTCTCTGGGCATCAGTGTATGCCATCGTATATTTGTGGAGGTCAAAGCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR CAA 90 bp | TATTACACGGTGCTTAGTCTTTGGCAAGAAGCCACTAATGCCAATATATCTTTTAGTGCGAATTGTTTTTaGCTTCTGAAAAGGTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: YYTVLSLWQEATNANISFSANCF*LLKRCG Trigger: TCCACACCTTTTCAGAAGCAAAAAACAATTCGCACT...AAAAGATATATTGGCATTAGTGGCTTCTTGCCAAAGACTAAGCACCGTGTAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS-3UTR CAA 90 bp | TATTACACGGTGCTTAGTCTTTGGCAAGAAGCCACTAATGCCAATATATCTTTTAAAAACCTTCTCACATaGCAAACACACGAAGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: YYTVLSLWQEATNANISFKNLLT*QTHEEL Trigger: CAACTCTTCGTGTGTTTGCAATGTGAGAAGGTTTTT...AAAAGATATATTGGCATTAGTGGCTTCTTGCCAAAGACTAAGCACCGTGTAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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| CDS CCA 72 bp | GCGGTTCTCCACTGGAGCTCTTTCCATCGTTCTGACTaGATGGGAGACACCTGGAATCTTCCTTACAGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: AVLHWSSFHRSD*MGDTWNLPYSD Trigger: GTCACTGTAAGGAAGATTCCAGGTGTCTCCCATCCAGTCAGAACGATGGAAAGAGCTCCAGTGGAGAACCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000179695.5 ENSMUST00000202988.4 |
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