Pregenerated sensors for ZFP791 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074194Ensembl transcript IDs: ENSMUST00000098550.4, ENSMUST00000211109.2
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATTGGACTCAGGATCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTaGACCCTATGCCCAGCTCTTACAAGAACAGAGATGAGAGGCTAC | + |
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Preference number: 1 (lower is better) Translates to: IGLRISGRAVSALNH*TLCPALTRTEMRGY Trigger: GTAGCCTCTCATCTCTGTTCTTGTAAGAGCTGGGCATAGGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGATCCTGAGTCCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| 3UTR TCA 90 bp | GCAAGATTGAGTCAGTCAGCTTGGAGAGTTTTGAGCCAGAACAGTTaGGTTGACCAGGCAGCCAGAGTTCAGGAAAAACAAGAAAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: ARLSQSAWRVLSQNS*VDQAARVQEKQERV Trigger: CACCCTTTCTTGTTTTTCCTGAACTCTGGCTGCCTGGTCAACTCAACTGTTCTGGCTCAAAACTCTCCAAGCTGACTGACTCAATCTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| 3UTR TCA 90 bp | GTTGAGTTGACCAGGCAGCCAGAGTTCAGGAAAAACAAGAAAGGGTaGGTTATTCATCAGCCTATCAGTCTTAGAGGCTGGAAACATTCT | + |
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Preference number: 1 (lower is better) Translates to: VELTRQPEFRKNKKG*VIHQPISLRGWKHS Trigger: AGAATGTTTCCAGCCTCTAAGACTGATAGGCTGATGAATAACTCACCCTTTCTTGTTTTTCCTGAACTCTGGCTGCCTGGTCAACTCAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| 3UTR TCA 90 bp | AGAGGTTTACTAGAAGAGTTTTACAGAGACAGGTTGAAGACAGAATaGGCCAGAAGATTAGAAAAGACTGCTAGAGTTAGTTTGAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: RGLLEEFYRDRLKTE*ARRLEKTARVSLRP Trigger: TGGCCTCAAACTAACTCTAGCAGTCTTTTCTAATCTTCTGGCTCATTCTGTCTTCAACCTGTCTCTGTAAAACTCTTCTAGTAAACCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| 3UTR-3UTR TCA 90 bp | ATGCCCAGCTCTTACAAGAACAGAGATGAGAGGCTACTCAAGACAAAACAGTGGCCAGAACAGTTGAGTTaGCCAGGCAGCCAGAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: MPSSYKNRDERLLKTKQWPEQLS*PGSQSS Trigger: TGAACTCTGGCTGCCTGGTCAACTCAACTGTTCTGG...CCACTGTTTTGTCTTGAGTAGCCTCTCATCTCTGTTCTTGTAAGAGCTGGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| 3UTR-3UTR TCA 90 bp | CATGTGGTTACTGAGAATTGGACTCAGGATCTCTGGAAGAGCAGTCAGTGCTCTACACACACACATCTCTaGGTTGGAGGTCAGTTTAGT | + |
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Preference number: 2 (lower is better) Translates to: HVVTENWTQDLWKSSQCSTHTHL*VGGQFS Trigger: ACTAAACTGACCTCCAACTCAGAGATGTGTGTGTGT...AGAGCACTGACTGCTCTTCCAGAGATCCTGAGTCCAATTCTCAGTAACCACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| 3UTR CAA 90 bp | AAAATAATCTTTCTTCTAAAACACACACACACACACATCTCTGAGTaGGAGGTCAGTTTAGTCTACATAGTGAACTTCAGGCCAGTCAGG | + |
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Preference number: 2 (lower is better) Translates to: KIIFLLKHTHTHISE*EVSLVYIVNFRPVR Trigger: CCTGACTGGCCTGAAGTTCACTATGTAGACTAAACTGACCTCCAACTCAGAGATGTGTGTGTGTGTGTGTTTTAGAAGAAAGATTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| 3UTR-3UTR CAA 90 bp | CATGTGGTTACTGAGAATTGGACTCAGGATCTCTGGAAGAGCAGTCAGTGCTCTGCCAGAACAGTTGAGTaGACCAGGCAGCCAGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: HVVTENWTQDLWKSSQCSARTVE*TRQPEF Trigger: GAACTCTGGCTGCCTGGTCAACTCAACTGTTCTGGC...AGAGCACTGACTGCTCTTCCAGAGATCCTGAGTCCAATTCTCAGTAACCACATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| 3UTR CCA 72 bp | CAGATGGCTGTGAGCCACCATGTGGTTACTGAGAATTaGACTCAGGATCTCTGGAAGAGCAGTCAGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: QMAVSHHVVTEN*TQDLWKSSQCS Trigger: AGAGCACTGACTGCTCTTCCAGAGATCCTGAGTCCAATTCTCAGTAACCACATGGTGGCTCACAGCCATCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| 3UTR TCA 72 bp | AGGATCTCTGGAAGAGCAGTCAGTGCTCTTAACCACTaGACCCTATGCCCAGCTCTTACAAGAACAGAGATG | + |
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Preference number: 3 (lower is better) Translates to: RISGRAVSALNH*TLCPALTRTEM Trigger: CATCTCTGTTCTTGTAAGAGCTGGGCATAGGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAGAGATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| 3UTR TCA 72 bp | CCAATTTCAGATGGCTGTGAGCCACCATGTGGTTACTaGGAATTGGACTCAGGATCTCTGGAAGAGCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: PISDGCEPPCGY*ELDSGSLEEQS Trigger: TGACTGCTCTTCCAGAGATCCTGAGTCCAATTCTCAGTAACCACATGGTGGCTCACAGCCATCTGAAATTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| 3UTR TCA 72 bp | ACCAGGCAGCCAGAGTTCAGGAAAAACAAGAAAGGGTaGGTTATTCATCAGCCTATCAGTCTTAGAGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: TRQPEFRKNKKG*VIHQPISLRGW Trigger: CCAGCCTCTAAGACTGATAGGCTGATGAATAACTCACCCTTTCTTGTTTTTCCTGAACTCTGGCTGCCTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| 3UTR TCA 72 bp | GTCAGCTTGGAGAGTTTTGAGCCAGAACAGTTGAGTTaGCCAGGCAGCCAGAGTTCAGGAAAAACAAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: VSLESFEPEQLS*PGSQSSGKTRK Trigger: CTTTCTTGTTTTTCCTGAACTCTGGCTGCCTGGTCAACTCAACTGTTCTGGCTCAAAACTCTCCAAGCTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| 3UTR TCA 72 bp | AGTCAGTCAGCTTGGAGAGTTTTGAGCCAGAACAGTTaGGTTGACCAGGCAGCCAGAGTTCAGGAAAAACAA | + |
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Preference number: 3 (lower is better) Translates to: SQSAWRVLSQNS*VDQAARVQEKQ Trigger: TTGTTTTTCCTGAACTCTGGCTGCCTGGTCAACTCAACTGTTCTGGCTCAAAACTCTCCAAGCTGACTGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| 3UTR TCA 72 bp | ACTGAACCCTATGCCCAGCTCTTACAAGAACAGAGATaGGAGGCTACTCAAGACAAAACAGTGGAGAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: TEPYAQLLQEQR*EATQDKTVERE Trigger: CTCTCTCTCCACTGTTTTGTCTTGAGTAGCCTCTCATCTCTGTTCTTGTAAGAGCTGGGCATAGGGTTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| 3UTR-3UTR CAA 90 bp | ATGCCCAGCTCTTACAAGAACAGAGATGAGAGGCTACTCAAGACAAAACAGTGGTTGAGAGAAGCAAGATaGAGTCAGTCAGCTTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: MPSSYKNRDERLLKTKQWLREAR*SQSAWR Trigger: TCTCCAAGCTGACTGACTCAATCTTGCTTCTCTCAA...CCACTGTTTTGTCTTGAGTAGCCTCTCATCTCTGTTCTTGTAAGAGCTGGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGAAGAGCAGTCAGTGCTCTTAACCACTGAACCCTATGCCCAGCTCTTACAATGTTTCCTCAACATTTaGAATTTTATGGCCCACTTG | + |
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Preference number: 3 (lower is better) Translates to: LEEQSVLLTTEPYAQLLQCFLNI*NFMAHL Trigger: CAAGTGGGCCATAAAATTCAAAATGTTGAGGAAACA...TTGTAAGAGCTGGGCATAGGGTTCAGTGGTTAAGAGCACTGACTGCTCTTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| 3UTR-3UTR CAA 90 bp | AAGTTGAGAGAAGCAAGATTGAGTCAGTCAGCTTGGAGAGTTTTGAGCCAGAACACACACATCTCTGAGTaGGAGGTCAGTTTAGTCTAC | + |
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Preference number: 3 (lower is better) Translates to: KLREARLSQSAWRVLSQNTHISE*EVSLVY Trigger: GTAGACTAAACTGACCTCCAACTCAGAGATGTGTGT...GTTCTGGCTCAAAACTCTCCAAGCTGACTGACTCAATCTTGCTTCTCTCAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| 3UTR-3UTR CAA 90 bp | CATGTGGTTACTGAGAATTGGACTCAGGATCTCTGGAAGAGCAGTCAGTGCTCTAATTTTATGGCCCACTaGATGTCAGTTTCCTATTAC | + |
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Preference number: 3 (lower is better) Translates to: HVVTENWTQDLWKSSQCSNFMAH*MSVSYY Trigger: GTAATAGGAAACTGACATCAAGTGGGCCATAAAATT...AGAGCACTGACTGCTCTTCCAGAGATCCTGAGTCCAATTCTCAGTAACCACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGCTCTTACAAGAACAGAGATGAGAGGCTACTCAAGACAAAACAGTGGAGAGGCATTTTCATGTTTATaGAAGGATGTGGACAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: PALTRTEMRGYSRQNSGEAFSCL*KDVDKA Trigger: TGCTTTGTCCACATCCTTCAATAAACATGAAAATGC...CTCTCCACTGTTTTGTCTTGAGTAGCCTCTCATCTCTGTTCTTGTAAGAGCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| 3UTR TCA 72 bp | AATCTTTCTTCTAAAACACACACACACACACATCTCTaGGTTGGAGGTCAGTTTAGTCTACATAGTGAACTT | + |
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Preference number: 3 (lower is better) Translates to: NLSSKTHTHTHL*VGGQFSLHSEL Trigger: AAGTTCACTATGTAGACTAAACTGACCTCCAACTCAGAGATGTGTGTGTGTGTGTGTTTTAGAAGAAAGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| CDS-3UTR GCA 90 bp | ATGCCCAGCTCTTACAAGAACAGAGATGAGAGGCTACTCAAGACAAAACAGTGGGGCTTCTCTCCAGTGTaGACCCGCCTGTGGACTCGA | + |
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Preference number: 4 (lower is better) Translates to: MPSSYKNRDERLLKTKQWGFSPV*TRLWTR Trigger: TCGAGTCCACAGGCGGGTGCACACTGGAGAGAAGCC...CCACTGTTTTGTCTTGAGTAGCCTCTCATCTCTGTTCTTGTAAGAGCTGGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| CDS-3UTR TCA 90 bp | GCCAGAACAGTTGAGTTGACCAGGCAGCCAGAGTTCAGGAAAAACAAGAAAGGGGGGATGAACAAAGCATaGAGCCTTTTCCACACACGC | + |
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Preference number: 4 (lower is better) Translates to: ARTVELTRQPEFRKNKKGGMNKA*SLFHTR Trigger: GCGTGTGTGGAAAAGGCTTCATGCTTTGTTCATCCC...CCCTTTCTTGTTTTTCCTGAACTCTGGCTGCCTGGTCAACTCAACTGTTCTGGC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| CDS-3UTR TCA 90 bp | GCCAGAACAGTTGAGTTGACCAGGCAGCCAGAGTTCAGGAAAAACAAGAAAGGGCAATGCTCGCATTTATaGGGCTTGTTTGCATCGCCG | + |
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Preference number: 4 (lower is better) Translates to: ARTVELTRQPEFRKNKKGQCSHL*GLFASP Trigger: CGGCGATGCAAACAAGCCTCATAAATGCGAGCATTG...CCCTTTCTTGTTTTTCCTGAACTCTGGCTGCCTGGTCAACTCAACTGTTCTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| CDS-3UTR TCA 90 bp | ATCTCTGAGTTGGAGGTCAGTTTAGTCTACATAGTGAACTTCAGGCCAGTCAGGCCCACTCTTCCTGAGTaGAAGTCACACACACGTCCT | + |
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Preference number: 4 (lower is better) Translates to: ISELEVSLVYIVNFRPVRPTLPE*KSHTRP Trigger: AGGACGTGTGTGTGACTTTCACTCAGGAAGAGTGGG...CCTGACTGGCCTGAAGTTCACTATGTAGACTAAACTGACCTCCAACTCAGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| CDS-3UTR TCA 90 bp | ATCTCTGAGTTGGAGGTCAGTTTAGTCTACATAGTGAACTTCAGGCCAGTCAGGGCGCTTGAAGGGCGCTaGGGAAAACGAAAGCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: ISELEVSLVYIVNFRPVRALEGR*GKRKLF Trigger: GAAAAGCTTTCGTTTTCCTCAGCGCCCTTCAAGCGC...CCTGACTGGCCTGAAGTTCACTATGTAGACTAAACTGACCTCCAACTCAGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| CDS-3UTR TCA 90 bp | AAGTTGAGAGAAGCAAGATTGAGTCAGTCAGCTTGGAGAGTTTTGAGCCAGAACAGATCCCACTCTTCCTaGGTGAAAGTCACACACACG | + |
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Preference number: 4 (lower is better) Translates to: KLREARLSQSAWRVLSQNRSHSS*VKVTHT Trigger: CGTGTGTGTGACTTTCACTCAGGAAGAGTGGGATCT...GTTCTGGCTCAAAACTCTCCAAGCTGACTGACTCAATCTTGCTTCTCTCAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| CDS-3UTR TCA 90 bp | TGTTTATTGAAGGATGTGGACAAAGCAAAAAGTTCTCCCATGCATGCGTACACTAGTTCATGGCCAGGGTaGGCTCTGACATGCCTAGTG | + |
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Preference number: 4 (lower is better) Translates to: CLLKDVDKAKSSPMHAYTSSWPG*ALTCLV Trigger: CACTAGGCATGTCAGAGCTCACCCTGGCCATGAACT...AGTGTACGCATGCATGGGAGAACTTTTTGCTTTGTCCACATCCTTCAATAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| CDS-3UTR TCA 90 bp | GAAGTTGAGAGAAGCAAGATTGAGTCAGTCAGCTTGGAGAGTTTTGAGCCAGAACACTTGTGCGGGATATaGAGGCTTTCCCGCATTCTT | + |
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Preference number: 4 (lower is better) Translates to: EVERSKIESVSLESFEPEHLCGI*RLSRIL Trigger: AAGAATGCGGGAAAGCCTTCATATCCCGCACAAGTG...TTCTGGCTCAAAACTCTCCAAGCTGACTGACTCAATCTTGCTTCTCTCAACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| CDS-3UTR CCA 90 bp | CATGTGGTTACTGAGAATTGGACTCAGGATCTCTGGAAGAGCAGTCAGTGCTCTGTTCTTTCGTGGATTTaGATGGAACTGGGACAACTG | + |
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Preference number: 4 (lower is better) Translates to: HVVTENWTQDLWKSSQCSVLSWI*MELGQL Trigger: CAGTTGTCCCAGTTCCATCCAAATCCACGAAAGAAC...AGAGCACTGACTGCTCTTCCAGAGATCCTGAGTCCAATTCTCAGTAACCACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| CDS-3UTR CCA 90 bp | AGGCCAGTCAGGGCTACAGCAACAAACCAAAGCATGCAGATATATCAGAAACAACCAGTGTTTGGAATCTaGCTGAAGCTTTCTCCATGC | + |
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Preference number: 4 (lower is better) Translates to: RPVRATATNQSMQIYQKQPVFGI*LKLSPC Trigger: GCATGGAGAAAGCTTCAGCCAGATTCCAAACACTGG...TTGTTTCTGATATATCTGCATGCTTTGGTTTGTTGCTGTAGCCCTGACTGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| CDS-3UTR GCA 90 bp | ATCTCTGAGTTGGAGGTCAGTTTAGTCTACATAGTGAACTTCAGGCCAGTCAGGGTCCTTTTATGGATCTaGATCGAAGTGGAACATCTG | + |
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Preference number: 4 (lower is better) Translates to: ISELEVSLVYIVNFRPVRVLLWI*IEVEHL Trigger: CAGATGTTCCACTTCGATGCAGATCCATAAAAGGAC...CCTGACTGGCCTGAAGTTCACTATGTAGACTAAACTGACCTCCAACTCAGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| 3UTR CAA 72 bp | AAGCAGAGCAATTCAGAGAAGTTGAGAGAAGCAAGATaGAGTCAGTCAGCTTGGAGAGTTTTGAGCCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: KQSNSEKLREAR*SQSAWRVLSQN Trigger: GTTCTGGCTCAAAACTCTCCAAGCTGACTGACTCAATCTTGCTTCTCTCAACTTCTCTGAATTGCTCTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| CDS-3UTR TCA 90 bp | TGTTTATTGAAGGATGTGGACAAAGCAAAAAGTTCTCCCATGCATGCGTACACTGGTGTATCTTCAGCGTaGGTTTTGACATGTCGTCGA | + |
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Preference number: 4 (lower is better) Translates to: CLLKDVDKAKSSPMHAYTGVSSA*VLTCRR Trigger: TCGACGACATGTCAAAACTCACGCTGAAGATACACC...AGTGTACGCATGCATGGGAGAACTTTTTGCTTTGTCCACATCCTTCAATAAACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| CDS-3UTR CCA 90 bp | AAGAAAGAGAAGAGGTTTACTAGAAGAGTTTTACAGAGACAGGTTGAAGACAGAGTGTGGGTTCTTTCGTaGATTTGGATGGAACTGGGA | + |
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Preference number: 4 (lower is better) Translates to: KKEKRFTRRVLQRQVEDRVWVLS*IWMELG Trigger: TCCCAGTTCCATCCAAATCCACGAAAGAACCCACAC...TCTGTCTTCAACCTGTCTCTGTAAAACTCTTCTAGTAAACCTCTTCTCTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| CDS-3UTR TCA 90 bp | ATGTTTATTGAAGGATGTGGACAAAGCAAAAAGTTCTCCCATGCATGCGTACACGATTCTGTACTGATTTaGAACATCCTGGTCTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: MFIEGCGQSKKFSHACVHDSVLI*NILVFQ Trigger: TTGGAAGACCAGGATGTTTCAAATCAGTACAGAATC...GTGTACGCATGCATGGGAGAACTTTTTGCTTTGTCCACATCCTTCAATAAACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| CDS-3UTR TCA 90 bp | TGTTTATTGAAGGATGTGGACAAAGCAAAAAGTTCTCCCATGCATGCGTACACTTCTTGGATTCTGTACTaGTTTGAAACATCCTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: CLLKDVDKAKSSPMHAYTSWILY*FETSWS Trigger: AGACCAGGATGTTTCAAATCAGTACAGAATCCAAGA...AGTGTACGCATGCATGGGAGAACTTTTTGCTTTGTCCACATCCTTCAATAAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| CDS-3UTR GCA 90 bp | AAGTTGAGAGAAGCAAGATTGAGTCAGTCAGCTTGGAGAGTTTTGAGCCAGAACCTGAAGCTTTCTCCATaGTCAATAACTTCTTTACTT | + |
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Preference number: 4 (lower is better) Translates to: KLREARLSQSAWRVLSQNLKLSP*SITSLL Trigger: AAGTAAAGAAGTTATTGAGCATGGAGAAAGCTTCAG...GTTCTGGCTCAAAACTCTCCAAGCTGACTGACTCAATCTTGCTTCTCTCAACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| CDS-3UTR CCA 90 bp | CTCAACATTTTGAATTTTATGGCCCACTTGATGTCAGTTTCCTATTACACCGCAAATTCGAAGAGAACCTaGAGAACTAAGCCCTTTACC | + |
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Preference number: 4 (lower is better) Translates to: LNILNFMAHLMSVSYYTANSKRT*RTKPFT Trigger: GGTAAAGGGCTTAGTTCTCCAGGTTCTCTTCGAATT...TGCGGTGTAATAGGAAACTGACATCAAGTGGGCCATAAAATTCAAAATGTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| CDS-3UTR TCA 90 bp | CTCAACATTTTGAATTTTATGGCCCACTTGATGTCAGTTTCCTATTACACCGCATACCTGAACATAGCTTaGACATCTAAAGGTTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: LNILNFMAHLMSVSYYTAYLNIA*TSKGFA Trigger: GGCAAAACCTTTAGATGTTCAAGCTATGTTCAGGTA...TGCGGTGTAATAGGAAACTGACATCAAGTGGGCCATAAAATTCAAAATGTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| CDS-3UTR CAA 90 bp | CCAGCTCTTACAAGAACAGAGATGAGAGGCTACTCAAGACAAAACAGTGGAGAGATTTATGAGGCTTGTTaGCATCGCCGCTGTGTGTCA | + |
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Preference number: 5 (lower is better) Translates to: PALTRTEMRGYSRQNSGEIYEAC*HRRCVS Trigger: TGACACACAGCGGCGATGCAAACAAGCCTCATAAAT...CTCTCCACTGTTTTGTCTTGAGTAGCCTCTCATCTCTGTTCTTGTAAGAGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| CDS-3UTR CAA 90 bp | CATGTGGTTACTGAGAATTGGACTCAGGATCTCTGGAAGAGCAGTCAGTGCTCTTGTCCGTTCATGTGTTaGAAAGGGCTGGAAATAGAT | + |
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Preference number: 5 (lower is better) Translates to: HVVTENWTQDLWKSSQCSCPFMC*KGLEID Trigger: ATCTATTTCCAGCCCTTTCAAACACATGAACGGACA...AGAGCACTGACTGCTCTTCCAGAGATCCTGAGTCCAATTCTCAGTAACCACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| CDS-3UTR CAA 90 bp | CCAGCTCTTACAAGAACAGAGATGAGAGGCTACTCAAGACAAAACAGTGGAGAGGGATTCTGTACTGATTaGAAACATCCTGGTCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: PALTRTEMRGYSRQNSGEGFCTD*KHPGLP Trigger: TGGAAGACCAGGATGTTTCAAATCAGTACAGAATCC...CTCTCCACTGTTTTGTCTTGAGTAGCCTCTCATCTCTGTTCTTGTAAGAGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211109.2 |
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| CDS GCA 72 bp | CGCCTTCCCGCAATGCTCGCATTTATGAGGCTTGTTTaGATCGCCGCTGTGTGTCACCATGTGCGTTTTGAC | + |
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Preference number: 6 (lower is better) Translates to: RLPAMLAFMRLV*IAAVCHHVRFD Trigger: GTCAAAACGCACATGGTGACACACAGCGGCGATGCAAACAAGCCTCATAAATGCGAGCATTGCGGGAAGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098550.4 ENSMUST00000211109.2 |
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| CDS TCA 72 bp | ATGGCCAGGGTGAGCTCTGACATGCCTAGTGAGGGATaGACAAAGCATGAAGCCTTTTCCACACACGCTACA | + |
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Preference number: 6 (lower is better) Translates to: MARVSSDMPSEG*TKHEAFSTHAT Trigger: TGTAGCGTGTGTGGAAAAGGCTTCATGCTTTGTTCATCCCTCACTAGGCATGTCAGAGCTCACCCTGGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098550.4 ENSMUST00000211109.2 |
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| CDS TCA 72 bp | TCTCCACACTTAAACCCAGCAAGTTCATGGCCAGGGTaGGCTCTGACATGCCTAGTGAGGGATGAACAAAGC | + |
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Preference number: 6 (lower is better) Translates to: SPHLNPASSWPG*ALTCLVRDEQS Trigger: GCTTTGTTCATCCCTCACTAGGCATGTCAGAGCTCACCCTGGCCATGAACTTGCTGGGTTTAAGTGTGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098550.4 ENSMUST00000211109.2 |
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| CDS CCA 72 bp | CCAGAAGTTATCTTGGCCGCACCAGTGTTTGGAATCTaGCTGAAGCTTTCTCCATGCTCAATAACTTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: PEVILAAPVFGI*LKLSPCSITSL Trigger: TAAAGAAGTTATTGAGCATGGAGAAAGCTTCAGCCAGATTCCAAACACTGGTGCGGCCAAGATAACTTCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098550.4 ENSMUST00000211109.2 |
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| CDS CAA 90 bp | GTATCACATAACTTCTTACATTTTCCTCTTGGATTCTGTACTGATTaGAAACATCCTGGTCTTCCAATTCACTCGCCACAGAGGCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: VSHNFLHFPLGFCTD*KHPGLPIHSPQRPG Trigger: ACCTGGCCTCTGTGGCGAGTGAATTGGAAGACCAGGATGTTTCAAATCAGTACAGAATCCAAGAGGAAAATGTAAGAAGTTATGTGATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098550.4 ENSMUST00000211109.2 |
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