Pregenerated sensors for ZFP790 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000011427Ensembl transcript IDs: ENSMUST00000032796.14, ENSMUST00000178162.3
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATAGCCAGGTTGCTTGCCAAGCCCTGTTCCCCACAGCTGCAAACCTaGAGGGCATTTCCACATTCTCTCAGGTCCCTTTTGAGAATTTAC | + |
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Preference number: 1 (lower is better) Translates to: IARLLAKPCSPQLQT*RAFPHSLRSLLRIY Trigger: GTAAATTCTCAAAAGGGACCTGAGAGAATGTGGAAATGCCCTTCAGGTTTGCAGCTGTGGGGAACAGGGCTTGGCAAGCAACCTGGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| 3UTR TCA 90 bp | TTTATCTTCATGGGCTTCCTCAAACGTGAGGGCTGGGGATGCAGCTaGGAAACAAGACAGTGTGTTCAGCACACACAGCTCAGGGTTTCA | + |
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Preference number: 1 (lower is better) Translates to: FIFMGFLKREGWGCS*ETRQCVQHTQLRVS Trigger: TGAAACCCTGAGCTGTGTGTGCTGAACACACTGTCTTGTTTCTCAGCTGCATCCCCAGCCCTCACGTTTGAGGAAGCCCATGAAGATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| 3UTR TCA 90 bp | AAGCCTCCACATTGTTTACACTGTAGGATTCTCTACCCCACGGACTaGCATGGACAGAGACTTGAGTTACAACTAAAGGCTTCCCCAGAT | + |
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Preference number: 1 (lower is better) Translates to: KPPHCLHCRILYPTD*HGQRLELQLKASPD Trigger: ATCTGGGGAAGCCTTTAGTTGTAACTCAAGTCTCTGTCCATGTCAGTCCGTGGGGTAGAGAATCCTACAGTGTAAACAATGTGGAGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| 3UTR GCA 90 bp | GCTGCCATGGTAACTAAAATCACTTCATACATTTGTGGGGCTCGGTaGCAGCATGAACTTCTTGTCATGAGAGGAAAGTCCAAGATGAAA | + |
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Preference number: 1 (lower is better) Translates to: AAMVTKITSYICGAR*QHELLVMRGKSKMK Trigger: TTTCATCTTGGACTTTCCTCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCCACAAATGTATGAAGTGATTTTAGTTACCATGGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| 3UTR-3UTR TCA 90 bp | CTGGGGATGCAGCTGAGAAACAAGACAGTGTGTTCAGCACACACAGCTCAGGGTACATGGACAGAGACTTaGGTTACAACTAAAGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: LGMQLRNKTVCSAHTAQGTWTET*VTTKGF Trigger: GAAGCCTTTAGTTGTAACTCAAGTCTCTGTCCATGT...ACCCTGAGCTGTGTGTGCTGAACACACTGTCTTGTTTCTCAGCTGCATCCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| 3UTR-3UTR TCA 90 bp | GGGGCTCGGTGCCAGCATGAACTTCTTGTCATGAGAGGAAAGTCCAAGATGAAAGTGCTGGGTAAGATTTaGGACCCAGAAATAGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: GARCQHELLVMRGKSKMKVLGKI*DPEIGF Trigger: AAAGCCTATTTCTGGGTCTCAAATCTTACCCAGCAC...TTTCATCTTGGACTTTCCTCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| 3UTR-3UTR TCA 90 bp | GGGGCTCGGTGCCAGCATGAACTTCTTGTCATGAGAGGAAAGTCCAAGATGAAAACATGGACAGAGACTTaGGTTACAACTAAAGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: GARCQHELLVMRGKSKMKTWTET*VTTKGF Trigger: GAAGCCTTTAGTTGTAACTCAAGTCTCTGTCCATGT...TTTCATCTTGGACTTTCCTCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| 3UTR-3UTR TCA 90 bp | GGCATTTCCACATTCTCTCAGGTCCCTTTTGAGAATTTACTATCAGTTAAGTGCCTCTACCCCACGGACTaGCATGGACAGAGACTTGAG | + |
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Preference number: 2 (lower is better) Translates to: GISTFSQVPFENLLSVKCLYPTD*HGQRLE Trigger: CTCAAGTCTCTGTCCATGTCAGTCCGTGGGGTAGAG...GCACTTAACTGATAGTAAATTCTCAAAAGGGACCTGAGAGAATGTGGAAATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| 3UTR-3UTR TCA 90 bp | GGCATTTCCACATTCTCTCAGGTCCCTTTTGAGAATTTACTATCAGTTAAGTGCCCTTTGAGCAAGATGTaGACCCATGAAAGCCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: GISTFSQVPFENLLSVKCPLSKM*THESLH Trigger: GTGGAGGCTTTCATGGGTTCACATCTTGCTCAAAGG...GCACTTAACTGATAGTAAATTCTCAAAAGGGACCTGAGAGAATGTGGAAATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| 3UTR-3UTR TCA 90 bp | AGGGCATTTCCACATTCTCTCAGGTCCCTTTTGAGAATTTACTATCAGTTAAGTCCTTTGAGCAAGATGTaGACCCATGAAAGCCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: RAFPHSLRSLLRIYYQLSPLSKM*THESLH Trigger: GTGGAGGCTTTCATGGGTTCACATCTTGCTCAAAGG...ACTTAACTGATAGTAAATTCTCAAAAGGGACCTGAGAGAATGTGGAAATGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| 3UTR-3UTR TCA 90 bp | CAGCATGAACTTCTTGTCATGAGAGGAAAGTCCAAGATGAAAACTTTTCCATCTGTGCTGGGTAAGATTTaGGACCCAGAAATAGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: QHELLVMRGKSKMKTFPSVLGKI*DPEIGF Trigger: AAAGCCTATTTCTGGGTCTCAAATCTTACCCAGCAC...AGATGGAAAAGTTTTCATCTTGGACTTTCCTCTCATGACAAGAAGTTCATGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| 3UTR CAA 90 bp | AGCTCAGGGTTTCATACCACAGGAAAAAGTATATATATCCAGGTGTaGACCCAAGCTGCCATGGTAACTAAAATCACTTCATACATTTGT | + |
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Preference number: 2 (lower is better) Translates to: SSGFHTTGKSIYIQV*TQAAMVTKITSYIC Trigger: ACAAATGTATGAAGTGATTTTAGTTACCATGGCAGCTTGGGTCAACACCTGGATATATATACTTTTTCCTGTGGTATGAAACCCTGAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| 3UTR TCA 72 bp | CCCACCAATGTGGACACTCTAGTGCTGGGTAAGATTTaGGACCCAGAAATAGGCTTTTCCAAGCCCTCCACC | + |
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Preference number: 3 (lower is better) Translates to: PTNVDTLVLGKI*DPEIGFSKPST Trigger: GGTGGAGGGCTTGGAAAAGCCTATTTCTGGGTCTCAAATCTTACCCAGCACTAGAGTGTCCACATTGGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| 3UTR CCA 72 bp | AGAGGAAAGTCCAAGATGAAAACTTTTCCATCTCTCTaGGATAGCCAGGTTGCTTGCCAAGCCCTGTTCCCC | + |
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Preference number: 3 (lower is better) Translates to: RGKSKMKTFPSL*DSQVACQALFP Trigger: GGGGAACAGGGCTTGGCAAGCAACCTGGCTATCCCAGAGAGATGGAAAAGTTTTCATCTTGGACTTTCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| 3UTR TCA 72 bp | GATTCTCTACCCCACGGACTGACATGGACAGAGACTTaGGTTACAACTAAAGGCTTCCCCAGATCTGCTGTA | + |
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Preference number: 3 (lower is better) Translates to: DSLPHGLTWTET*VTTKGFPRSAV Trigger: TACAGCAGATCTGGGGAAGCCTTTAGTTGTAACTCAAGTCTCTGTCCATGTCAGTCCGTGGGGTAGAGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| 3UTR TCA 72 bp | TTTCAACATATTTATCTTCATGGGCTTCCTCAAACGTaGGGGCTGGGGATGCAGCTGAGAAACAAGACAGTG | + |
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Preference number: 3 (lower is better) Translates to: FQHIYLHGLPQT*GLGMQLRNKTV Trigger: CACTGTCTTGTTTCTCAGCTGCATCCCCAGCCCTCACGTTTGAGGAAGCCCATGAAGATAAATATGTTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| 3UTR TCA 72 bp | AATCACTTCATACATTTGTGGGGCTCGGTGCCAGCATaGACTTCTTGTCATGAGAGGAAAGTCCAAGATGAA | + |
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Preference number: 3 (lower is better) Translates to: NHFIHLWGSVPA*TSCHERKVQDE Trigger: TTCATCTTGGACTTTCCTCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCCACAAATGTATGAAGTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| 3UTR GCA 72 bp | GTAACTAAAATCACTTCATACATTTGTGGGGCTCGGTaGCAGCATGAACTTCTTGTCATGAGAGGAAAGTCC | + |
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Preference number: 3 (lower is better) Translates to: VTKITSYICGAR*QHELLVMRGKS Trigger: GGACTTTCCTCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCCACAAATGTATGAAGTGATTTTAGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| 3UTR-3UTR CAA 90 bp | CAGCATGAACTTCTTGTCATGAGAGGAAAGTCCAAGATGAAAACTTTTCCATCTTCTCTCAGGTCCCTTTaGAGAATTTACTATCAGTTA | + |
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Preference number: 3 (lower is better) Translates to: QHELLVMRGKSKMKTFPSSLRSL*RIYYQL Trigger: TAACTGATAGTAAATTCTCAAAAGGGACCTGAGAGA...AGATGGAAAAGTTTTCATCTTGGACTTTCCTCTCATGACAAGAAGTTCATGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR TCA 90 bp | GGGGCTCGGTGCCAGCATGAACTTCTTGTCATGAGAGGAAAGTCCAAGATGAAAGTGCCGGGCCAGGTCTaGCGCAGAAGCAAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GARCQHELLVMRGKSKMKVPGQV*RRSKGL Trigger: AAGGCCTTTGCTTCTGCGTCAGACCTGGCCCGGCAC...TTTCATCTTGGACTTTCCTCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR TCA 90 bp | ACCCAAGCTGCCATGGTAACTAAAATCACTTCATACATTTGTGGGGCTCGGTGCCCCGTGTGGATCCGGTaGTGTCGAGTCAGGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: TQAAMVTKITSYICGARCPVWIR*CRVRSE Trigger: CTCAGACCTGACTCGACATCACCGGATCCACACGGG...GCACCGAGCCCCACAAATGTATGAAGTGATTTTAGTTACCATGGCAGCTTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR TCA 90 bp | TACATTTGTGGGGCTCGGTGCCAGCATGAACTTCTTGTCATGAGAGGAAAGTCCATGTCGAGAGAGGTCTaGGGGGCAACGGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: YICGARCQHELLVMRGKSMSREV*GATEGL Trigger: AAGGCCTTCCGTTGCCCCTCAGACCTCTCTCGACAT...GGACTTTCCTCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCCACAAATGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR TCA 90 bp | ACCCAAGCTGCCATGGTAACTAAAATCACTTCATACATTTGTGGGGCTCGGTGCATGTCGAGAGAGGTCTaGGGGGCAACGGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: TQAAMVTKITSYICGARCMSREV*GATEGL Trigger: AAGGCCTTCCGTTGCCCCTCAGACCTCTCTCGACAT...GCACCGAGCCCCACAAATGTATGAAGTGATTTTAGTTACCATGGCAGCTTGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR CCA 90 bp | GGGGCTCGGTGCCAGCATGAACTTCTTGTCATGAGAGGAAAGTCCAAGATGAAACGGAAACTCTGCGCCTaGAAAGAAGGTCTCCCCGTT | + |
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Preference number: 4 (lower is better) Translates to: GARCQHELLVMRGKSKMKRKLCA*KEGLPV Trigger: AACGGGGAGACCTTCTTTCCAGGCGCAGAGTTTCCG...TTTCATCTTGGACTTTCCTCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR CCA 90 bp | TACATTTGTGGGGCTCGGTGCCAGCATGAACTTCTTGTCATGAGAGGAAAGTCCCGGAAACTCTGCGCCTaGAAAGAAGGTCTCCCCGTT | + |
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Preference number: 4 (lower is better) Translates to: YICGARCQHELLVMRGKSRKLCA*KEGLPV Trigger: AACGGGGAGACCTTCTTTCCAGGCGCAGAGTTTCCG...GGACTTTCCTCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCCACAAATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR TCA 90 bp | TACATTTGTGGGGCTCGGTGCCAGCATGAACTTCTTGTCATGAGAGGAAAGTCCTCTCACCTGTGTGAATaGGCTGAAGTTGAGCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: YICGARCQHELLVMRGKSSHLCE*AEVERA Trigger: AGCCCGCTCAACTTCAGCTCATTCACACAGGTGAGA...GGACTTTCCTCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCCACAAATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR TCA 90 bp | GGGGCTCGGTGCCAGCATGAACTTCTTGTCATGAGAGGAAAGTCCAAGATGAAACCAGTATGGAGTCTCTaGTGTCGGGTCAGTTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: GARCQHELLVMRGKSKMKPVWSL*CRVSSE Trigger: CTCAGAACTGACCCGACATCAGAGACTCCATACTGG...TTTCATCTTGGACTTTCCTCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR GCA 90 bp | AAGTCCAAGATGAAAACTTTTCCATCTCTCTGGGATAGCCAGGTTGCTTGCCAAGTGGCTCCTGACCTTTaGCTTCCCAGTCGGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: KSKMKTFPSLWDSQVACQVAPDL*LPSRLQ Trigger: CTGCAGCCGACTGGGAAGGCAAAGGTCAGGAGCCAC...TTGGCAAGCAACCTGGCTATCCCAGAGAGATGGAAAAGTTTTCATCTTGGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR TCA 90 bp | ACCCAAGCTGCCATGGTAACTAAAATCACTTCATACATTTGTGGGGCTCGGTGCCTACGGCCACATCTCTaGATGTCATTACGTGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TQAAMVTKITSYICGARCLRPHL*MSLRGP Trigger: TGGCCCACGTAATGACATTCAGAGATGTGGCCGTAG...GCACCGAGCCCCACAAATGTATGAAGTGATTTTAGTTACCATGGCAGCTTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR TCA 90 bp | ACCCAAGCTGCCATGGTAACTAAAATCACTTCATACATTTGTGGGGCTCGGTGCGACACTGAAGAGCTGTaGGCAGATTCAGAAGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: TQAAMVTKITSYICGARCDTEEL*ADSEGA Trigger: TGCCCCTTCTGAATCTGCTCACAGCTCTTCAGTGTC...GCACCGAGCCCCACAAATGTATGAAGTGATTTTAGTTACCATGGCAGCTTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR TCA 90 bp | ACCCAAGCTGCCATGGTAACTAAAATCACTTCATACATTTGTGGGGCTCGGTGCCCAGTATGGAGTCTCTaGTGTCGGGTCAGTTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: TQAAMVTKITSYICGARCPVWSL*CRVSSE Trigger: CTCAGAACTGACCCGACATCAGAGACTCCATACTGG...GCACCGAGCCCCACAAATGTATGAAGTGATTTTAGTTACCATGGCAGCTTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR TCA 90 bp | ATCCAGGTGTTGACCCAAGCTGCCATGGTAACTAAAATCACTTCATACATTTGTGTGCCGGGCCAGGTCTaGCGCAGAAGCAAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: IQVLTQAAMVTKITSYICVPGQV*RRSKGL Trigger: AAGGCCTTTGCTTCTGCGTCAGACCTGGCCCGGCAC...ACAAATGTATGAAGTGATTTTAGTTACCATGGCAGCTTGGGTCAACACCTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR GCA 90 bp | TACATTTGTGGGGCTCGGTGCCAGCATGAACTTCTTGTCATGAGAGGAAAGTCCATGCTGAGTCAGGTGTaGCCCTCGAGTGAAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: YICGARCQHELLVMRGKSMLSQV*PSSESF Trigger: AAAGCTTTCACTCGAGGGGCACACCTGACTCAGCAT...GGACTTTCCTCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCCACAAATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR GCA 90 bp | CTGGGGATGCAGCTGAGAAACAAGACAGTGTGTTCAGCACACACAGCTCAGGGTGTAGGGATCAAGGAGTaGGGAGTGTTTTCTAAACCA | + |
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Preference number: 4 (lower is better) Translates to: LGMQLRNKTVCSAHTAQGVGIKE*GVFSKP Trigger: TGGTTTAGAAAACACTCCGCACTCCTTGATCCCTAC...ACCCTGAGCTGTGTGTGCTGAACACACTGTCTTGTTTCTCAGCTGCATCCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR TCA 90 bp | ATCACTTCATACATTTGTGGGGCTCGGTGCCAGCATGAACTTCTTGTCATGAGAGACACTGAAGAGCTGTaGGCAGATTCAGAAGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: ITSYICGARCQHELLVMRDTEEL*ADSEGA Trigger: TGCCCCTTCTGAATCTGCTCACAGCTCTTCAGTGTC...TCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCCACAAATGTATGAAGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR TCA 90 bp | TACATTTGTGGGGCTCGGTGCCAGCATGAACTTCTTGTCATGAGAGGAAAGTCCTTCAGTCTTGGACACTaGAGAGCTGTGAGCAGATTC | + |
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Preference number: 4 (lower is better) Translates to: YICGARCQHELLVMRGKSFSLGH*RAVSRF Trigger: GAATCTGCTCACAGCTCTTCAGTGTCCAAGACTGAA...GGACTTTCCTCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCCACAAATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR GCA 90 bp | ATCCAGGTGTTGACCCAAGCTGCCATGGTAACTAAAATCACTTCATACATTTGTGTGGCTCCTGACCTTTaGCTTCCCAGTCGGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: IQVLTQAAMVTKITSYICVAPDL*LPSRLQ Trigger: CTGCAGCCGACTGGGAAGGCAAAGGTCAGGAGCCAC...ACAAATGTATGAAGTGATTTTAGTTACCATGGCAGCTTGGGTCAACACCTGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR CCA 90 bp | ATCACTTCATACATTTGTGGGGCTCGGTGCCAGCATGAACTTCTTGTCATGAGAATCTTGCTCTTTCTCTaGCACAGGGAACCCATGCGG | + |
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Preference number: 4 (lower is better) Translates to: ITSYICGARCQHELLVMRILLFL*HREPMR Trigger: CCGCATGGGTTCCCTGTGCCAGAGAAAGAGCAAGAT...TCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCCACAAATGTATGAAGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR TCA 90 bp | ATCACTTCATACATTTGTGGGGCTCGGTGCCAGCATGAACTTCTTGTCATGAGAAATGCAAAGCCCCACTaGGACAAGGTGGCTGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: ITSYICGARCQHELLVMRNAKPH*DKVAVV Trigger: AACTACAGCCACCTTGTCTCAGTGGGGCTTTGCATT...TCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCCACAAATGTATGAAGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR TCA 90 bp | CAGCATGAACTTCTTGTCATGAGAGGAAAGTCCAAGATGAAAACTTTTCCATCTCCCGTGTGGATCCGGTaGTGTCGAGTCAGGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: QHELLVMRGKSKMKTFPSPVWIR*CRVRSE Trigger: CTCAGACCTGACTCGACATCACCGGATCCACACGGG...AGATGGAAAAGTTTTCATCTTGGACTTTCCTCTCATGACAAGAAGTTCATGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR GCA 90 bp | TACATTTGTGGGGCTCGGTGCCAGCATGAACTTCTTGTCATGAGAGGAAAGTCCCATGCGGTTGATAAATaGAAAGCCCCACTGAGACAA | + |
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Preference number: 4 (lower is better) Translates to: YICGARCQHELLVMRGKSHAVDK*KAPLRQ Trigger: TTGTCTCAGTGGGGCTTTGCATTTATCAACCGCATG...GGACTTTCCTCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCCACAAATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR GCA 90 bp | AAGTCCAAGATGAAAACTTTTCCATCTCTCTGGGATAGCCAGGTTGCTTGCCAATCCATGCAGGCATCTTaGTCTTTCTCTGGCACAGGG | + |
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Preference number: 4 (lower is better) Translates to: KSKMKTFPSLWDSQVACQSMQAS*SFSGTG Trigger: CCCTGTGCCAGAGAAAGAGCAAGATGCCTGCATGGA...TTGGCAAGCAACCTGGCTATCCCAGAGAGATGGAAAAGTTTTCATCTTGGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR GCA 90 bp | ACCCAAGCTGCCATGGTAACTAAAATCACTTCATACATTTGTGGGGCTCGGTGCCTCCCGAATATGAACTaGCTTGAGGTCTGTATCATG | + |
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Preference number: 4 (lower is better) Translates to: TQAAMVTKITSYICGARCLPNMN*LEVCIM Trigger: CATGATACAGACCTCAAGGCAGTTCATATTCGGGAG...GCACCGAGCCCCACAAATGTATGAAGTGATTTTAGTTACCATGGCAGCTTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR GCA 90 bp | ACCCAAGCTGCCATGGTAACTAAAATCACTTCATACATTTGTGGGGCTCGGTGCCCTTTGGGCATTCCTTaGATTGAAAACGTTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: TQAAMVTKITSYICGARCPLGIP*IENVSP Trigger: GGGAGAAACGTTTTCAATGCAAGGAATGCCCAAAGG...GCACCGAGCCCCACAAATGTATGAAGTGATTTTAGTTACCATGGCAGCTTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR CCA 90 bp | AAGTCCAAGATGAAAACTTTTCCATCTCTCTGGGATAGCCAGGTTGCTTGCCAAACACTGAGCAGTGAGTaGAATCTGAAGGCCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KSKMKTFPSLWDSQVACQTLSSE*NLKAFP Trigger: TGGGAAGGCCTTCAGATTCCACTCACTGCTCAGTGT...TTGGCAAGCAACCTGGCTATCCCAGAGAGATGGAAAAGTTTTCATCTTGGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR TCA 90 bp | ATCCAGGTGTTGACCCAAGCTGCCATGGTAACTAAAATCACTTCATACATTTGTCTACGGCCACATCTCTaGATGTCATTACGTGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IQVLTQAAMVTKITSYICLRPHL*MSLRGP Trigger: TGGCCCACGTAATGACATTCAGAGATGTGGCCGTAG...ACAAATGTATGAAGTGATTTTAGTTACCATGGCAGCTTGGGTCAACACCTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR GCA 90 bp | ACCCAAGCTGCCATGGTAACTAAAATCACTTCATACATTTGTGGGGCTCGGTGCTTGAGCGGGCTCTGGTaGAAAACTAAAGGATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQAAMVTKITSYICGARCLSGLW*KTKGFF Trigger: GAAAAATCCTTTAGTTTTGCACCAGAGCCCGCTCAA...GCACCGAGCCCCACAAATGTATGAAGTGATTTTAGTTACCATGGCAGCTTGGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR GCA 90 bp | AAGTCCAAGATGAAAACTTTTCCATCTCTCTGGGATAGCCAGGTTGCTTGCCAAACTGAAATGCCTTCTTaGCATCCTGAACTGCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSKMKTFPSLWDSQVACQTEMPS*HPELLG Trigger: ACCGAGCAGTTCAGGATGGCAAGAAGGCATTTCAGT...TTGGCAAGCAACCTGGCTATCCCAGAGAGATGGAAAAGTTTTCATCTTGGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR CCA 90 bp | ATCCAGGTGTTGACCCAAGCTGCCATGGTAACTAAAATCACTTCATACATTTGTATCTTGCTCTTTCTCTaGCACAGGGAACCCATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: IQVLTQAAMVTKITSYICILLFL*HREPMR Trigger: CCGCATGGGTTCCCTGTGCCAGAGAAAGAGCAAGAT...ACAAATGTATGAAGTGATTTTAGTTACCATGGCAGCTTGGGTCAACACCTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR TCA 90 bp | ATCCAGGTGTTGACCCAAGCTGCCATGGTAACTAAAATCACTTCATACATTTGTTGGAGCGTTTCCTCTTaGTTCTCACTTTGTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IQVLTQAAMVTKITSYICWSVSS*FSLCGG Trigger: GCCACCACAAAGTGAGAATCAAGAGGAAACGCTCCA...ACAAATGTATGAAGTGATTTTAGTTACCATGGCAGCTTGGGTCAACACCTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR TCA 90 bp | CAGCATGAACTTCTTGTCATGAGAGGAAAGTCCAAGATGAAAACTTTTCCATCTTCTCACCTGTGTGAATaGGCTGAAGTTGAGCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QHELLVMRGKSKMKTFPSSHLCE*AEVERA Trigger: AGCCCGCTCAACTTCAGCTCATTCACACAGGTGAGA...AGATGGAAAAGTTTTCATCTTGGACTTTCCTCTCATGACAAGAAGTTCATGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR TCA 90 bp | AGGGCATTTCCACATTCTCTCAGGTCCCTTTTGAGAATTTACTATCAGTTAAGTCCACACTCGTCACACTaGAATGCCTTCTTGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RAFPHSLRSLLRIYYQLSPHSSH*NAFLPS Trigger: GGATGGCAAGAAGGCATTTCAGTGTGACGAGTGTGG...ACTTAACTGATAGTAAATTCTCAAAAGGGACCTGAGAGAATGTGGAAATGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR GCA 90 bp | AAGTCCAAGATGAAAACTTTTCCATCTCTCTGGGATAGCCAGGTTGCTTGCCAACATGCGGTTGATAAATaGAAAGCCCCACTGAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: KSKMKTFPSLWDSQVACQHAVDK*KAPLRQ Trigger: TTGTCTCAGTGGGGCTTTGCATTTATCAACCGCATG...TTGGCAAGCAACCTGGCTATCCCAGAGAGATGGAAAAGTTTTCATCTTGGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR GCA 90 bp | CAGCATGAACTTCTTGTCATGAGAGGAAAGTCCAAGATGAAAACTTTTCCATCTTCCATGCAGGCATCTTaGTCTTTCTCTGGCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QHELLVMRGKSKMKTFPSSMQAS*SFSGTG Trigger: CCCTGTGCCAGAGAAAGAGCAAGATGCCTGCATGGA...AGATGGAAAAGTTTTCATCTTGGACTTTCCTCTCATGACAAGAAGTTCATGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR CCA 90 bp | ATCCAGGTGTTGACCCAAGCTGCCATGGTAACTAAAATCACTTCATACATTTGTCGGTATAAACTCTTCTaGTCCAGGCTCAGACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: IQVLTQAAMVTKITSYICRYKLF*SRLRHS Trigger: GGAGTGTCTGAGCCTGGACCAGAAGAGTTTATACCG...ACAAATGTATGAAGTGATTTTAGTTACCATGGCAGCTTGGGTCAACACCTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR TCA 90 bp | CCAAATTCCTTGAATTCAGTTCTCTTAGTCAGCATGATTTTCCAGGTGTCTATTCCACACTCGTCACACTaGAATGCCTTCTTGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PNSLNSVLLVSMIFQVSIPHSSH*NAFLPS Trigger: GGATGGCAAGAAGGCATTTCAGTGTGACGAGTGTGG...AATAGACACCTGGAAAATCATGCTGACTAAGAGAACTGAATTCAAGGAATTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR TCA 90 bp | ATCACTTCATACATTTGTGGGGCTCGGTGCCAGCATGAACTTCTTGTCATGAGAATGTTTAATGAGATGTaGCTGCTGGATAAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ITSYICGARCQHELLVMRMFNEM*LLDKGL Trigger: AAGGCCTTTATCCAGCAGTCACATCTCATTAAACAT...TCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCCACAAATGTATGAAGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR TCA 90 bp | ATCACTTCATACATTTGTGGGGCTCGGTGCCAGCATGAACTTCTTGTCATGAGACCTTCTCTCCTTCATTaGATTCGTGTGATTTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ITSYICGARCQHELLVMRPSLLH*IRVISY Trigger: GTAAGAAATCACACGAATTCAATGAAGGAGAGAAGG...TCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCCACAAATGTATGAAGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR GCA 90 bp | GGCATTTCCACATTCTCTCAGGTCCCTTTTGAGAATTTACTATCAGTTAAGTGCACTGAAATGCCTTCTTaGCATCCTGAACTGCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GISTFSQVPFENLLSVKCTEMPS*HPELLG Trigger: ACCGAGCAGTTCAGGATGGCAAGAAGGCATTTCAGT...GCACTTAACTGATAGTAAATTCTCAAAAGGGACCTGAGAGAATGTGGAAATGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR CCA 90 bp | CAGCATGAACTTCTTGTCATGAGAGGAAAGTCCAAGATGAAAACTTTTCCATCTCGGTATAAACTCTTCTaGTCCAGGCTCAGACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: QHELLVMRGKSKMKTFPSRYKLF*SRLRHS Trigger: GGAGTGTCTGAGCCTGGACCAGAAGAGTTTATACCG...AGATGGAAAAGTTTTCATCTTGGACTTTCCTCTCATGACAAGAAGTTCATGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR CCA 90 bp | AGGGCATTTCCACATTCTCTCAGGTCCCTTTTGAGAATTTACTATCAGTTAAGTACACTGAGCAGTGAGTaGAATCTGAAGGCCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RAFPHSLRSLLRIYYQLSTLSSE*NLKAFP Trigger: TGGGAAGGCCTTCAGATTCCACTCACTGCTCAGTGT...ACTTAACTGATAGTAAATTCTCAAAAGGGACCTGAGAGAATGTGGAAATGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR TCA 90 bp | TTCCATATTCCTTATATCCAGTTTCCTCTCATGAATTTTCTCCCTTTGAGCAAGAATGCAAAGCCCCACTaGGACAAGGTGGCTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FHIPYIQFPLMNFLPLSKNAKPH*DKVAVV Trigger: AACTACAGCCACCTTGTCTCAGTGGGGCTTTGCATT...CTTGCTCAAAGGGAGAAAATTCATGAGAGGAAACTGGATATAAGGAATATGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR TCA 90 bp | ATCCAGGTGTTGACCCAAGCTGCCATGGTAACTAAAATCACTTCATACATTTGTGAGGTCTGTATCATGTaGATGCCAGCTAAAGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IQVLTQAAMVTKITSYICEVCIM*MPAKVL Trigger: AAGGACTTTAGCTGGCATTCACATGATACAGACCTC...ACAAATGTATGAAGTGATTTTAGTTACCATGGCAGCTTGGGTCAACACCTGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR GCA 90 bp | GGCATTTCCACATTCTCTCAGGTCCCTTTTGAGAATTTACTATCAGTTAAGTGCCATTGCCCAAATCCATaGAGGCATCTTGCTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GISTFSQVPFENLLSVKCHCPNP*RHLALS Trigger: AGAAAGAGCAAGATGCCTGCATGGATTTGGGCAATG...GCACTTAACTGATAGTAAATTCTCAAAAGGGACCTGAGAGAATGTGGAAATGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR GCA 90 bp | CCAAATTCCTTGAATTCAGTTCTCTTAGTCAGCATGATTTTCCAGGTGTCTATTATGCTGAGTCAGGTGTaGCCCTCGAGTGAAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PNSLNSVLLVSMIFQVSIMLSQV*PSSESF Trigger: AAAGCTTTCACTCGAGGGGCACACCTGACTCAGCAT...AATAGACACCTGGAAAATCATGCTGACTAAGAGAACTGAATTCAAGGAATTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR GCA 90 bp | GGCATTTCCACATTCTCTCAGGTCCCTTTTGAGAATTTACTATCAGTTAAGTGCTTGAGCGGGCTCTGGTaGAAAACTAAAGGATTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GISTFSQVPFENLLSVKCLSGLW*KTKGFF Trigger: GAAAAATCCTTTAGTTTTGCACCAGAGCCCGCTCAA...GCACTTAACTGATAGTAAATTCTCAAAAGGGACCTGAGAGAATGTGGAAATGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR CCA 90 bp | CCAAATTCCTTGAATTCAGTTCTCTTAGTCAGCATGATTTTCCAGGTGTCTATTATTCTCACTTTGTGGTaGCTCCTGACCTTTGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PNSLNSVLLVSMIFQVSIILTLW*LLTFAF Trigger: GAAGGCAAAGGTCAGGAGCCACCACAAAGTGAGAAT...AATAGACACCTGGAAAATCATGCTGACTAAGAGAACTGAATTCAAGGAATTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR CCA 90 bp | ATCCAGGTGTTGACCCAAGCTGCCATGGTAACTAAAATCACTTCATACATTTGTAAGTTGAGCGGGCTCTaGTGCAAAACTAAAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: IQVLTQAAMVTKITSYICKLSGL*CKTKGF Trigger: AAATCCTTTAGTTTTGCACCAGAGCCCGCTCAACTT...ACAAATGTATGAAGTGATTTTAGTTACCATGGCAGCTTGGGTCAACACCTGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR TCA 90 bp | ATCCAGGTGTTGACCCAAGCTGCCATGGTAACTAAAATCACTTCATACATTTGTCCTTCTCTCCTTCATTaGATTCGTGTGATTTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: IQVLTQAAMVTKITSYICPSLLH*IRVISY Trigger: GTAAGAAATCACACGAATTCAATGAAGGAGAGAAGG...ACAAATGTATGAAGTGATTTTAGTTACCATGGCAGCTTGGGTCAACACCTGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR TCA 90 bp | TTCCATATTCCTTATATCCAGTTTCCTCTCATGAATTTTCTCCCTTTGAGCAAGGAGGTCTGTATCATGTaGATGCCAGCTAAAGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FHIPYIQFPLMNFLPLSKEVCIM*MPAKVL Trigger: AAGGACTTTAGCTGGCATTCACATGATACAGACCTC...CTTGCTCAAAGGGAGAAAATTCATGAGAGGAAACTGGATATAAGGAATATGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR GCA 90 bp | TTCCATATTCCTTATATCCAGTTTCCTCTCATGAATTTTCTCCCTTTGAGCAAGGTAGGGATCAAGGAGTaGGGAGTGTTTTCTAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: FHIPYIQFPLMNFLPLSKVGIKE*GVFSKP Trigger: TGGTTTAGAAAACACTCCGCACTCCTTGATCCCTAC...CTTGCTCAAAGGGAGAAAATTCATGAGAGGAAACTGGATATAAGGAATATGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR GCA 90 bp | TTCCATATTCCTTATATCCAGTTTCCTCTCATGAATTTTCTCCCTTTGAGCAAGCTCCCGAATATGAACTaGCTTGAGGTCTGTATCATG | + |
|
Preference number: 4 (lower is better) Translates to: FHIPYIQFPLMNFLPLSKLPNMN*LEVCIM Trigger: CATGATACAGACCTCAAGGCAGTTCATATTCGGGAG...CTTGCTCAAAGGGAGAAAATTCATGAGAGGAAACTGGATATAAGGAATATGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR GCA 90 bp | TTCCATATTCCTTATATCCAGTTTCCTCTCATGAATTTTCTCCCTTTGAGCAAGCCTTTGGGCATTCCTTaGATTGAAAACGTTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FHIPYIQFPLMNFLPLSKPLGIP*IENVSP Trigger: GGGAGAAACGTTTTCAATGCAAGGAATGCCCAAAGG...CTTGCTCAAAGGGAGAAAATTCATGAGAGGAAACTGGATATAAGGAATATGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR TCA 90 bp | CAGCATGAACTTCTTGTCATGAGAGGAAAGTCCAAGATGAAAACTTTTCCATCTATGTTTAATGAGATGTaGCTGCTGGATAAAGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QHELLVMRGKSKMKTFPSMFNEM*LLDKGL Trigger: AAGGCCTTTATCCAGCAGTCACATCTCATTAAACAT...AGATGGAAAAGTTTTCATCTTGGACTTTCCTCTCATGACAAGAAGTTCATGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR CCA 90 bp | TTCCATATTCCTTATATCCAGTTTCCTCTCATGAATTTTCTCCCTTTGAGCAAGAAGTTGAGCGGGCTCTaGTGCAAAACTAAAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: FHIPYIQFPLMNFLPLSKKLSGL*CKTKGF Trigger: AAATCCTTTAGTTTTGCACCAGAGCCCGCTCAACTT...CTTGCTCAAAGGGAGAAAATTCATGAGAGGAAACTGGATATAAGGAATATGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS GCA 90 bp | GCTCCATTCCCATTCCCTCCCAGTGGGACAACCGAGTTGCGCACGTaGTGTTTGTCCGTAGGGCTTTCTTCATCTGCCACCGGGAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: APFPFPPSGTTELRT*CLSVGLSSSATGNL Trigger: CAGATTCCCGGTGGCAGATGAAGAAAGCCCTACGGACAAACAGCACGTGCGCAACTCGGTTGTCCCACTGGGAGGGAATGGGAATGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR CAA 90 bp | CTGGGGATGCAGCTGAGAAACAAGACAGTGTGTTCAGCACACACAGCTCAGGGTTGCCAGCTAAAGTCCTaGCCCTTCTCCTTACAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LGMQLRNKTVCSAHTAQGCQLKS*PFSLQS Trigger: TGACTGTAAGGAGAAGGGCAAGGACTTTAGCTGGCA...ACCCTGAGCTGTGTGTGCTGAACACACTGTCTTGTTTCTCAGCTGCATCCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS CCA 90 bp | CTTCTTACCGGTGTGAACTGTCTCACACTGCGGAAACTCTGCGCCTaGAAAGAAGGTCTCCCCGTTCTCCTTATCTTCAAAGAACTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLTGVNCLTLRKLCA*KEGLPVLLIFKELL Trigger: GAGAAGTTCTTTGAAGATAAGGAGAACGGGGAGACCTTCTTTCCAGGCGCAGAGTTTCCGCAGTGTGAGACAGTTCACACCGGTAAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR CAA 90 bp | ATCACTTCATACATTTGTGGGGCTCGGTGCCAGCATGAACTTCTTGTCATGAGAAATCTGCTAGGCTCATaGCCCAAATCCATGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ITSYICGARCQHELLVMRNLLGS*PKSMQA Trigger: TGCCTGCATGGATTTGGGCAATGAGCCTAGCAGATT...TCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCCACAAATGTATGAAGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR CAA 90 bp | ATCACTTCATACATTTGTGGGGCTCGGTGCCAGCATGAACTTCTTGTCATGAGACTGGAGCGTTTCCTCTaGATTCTCACTTTGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ITSYICGARCQHELLVMRLERFL*ILTLWW Trigger: CCACCACAAAGTGAGAATCAAGAGGAAACGCTCCAG...TCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCCACAAATGTATGAAGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR CAA 90 bp | CTGGGGATGCAGCTGAGAAACAAGACAGTGTGTTCAGCACACACAGCTCAGGGTGCCTTCTCTCCTTCATaGAATTCGTGTGATTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LGMQLRNKTVCSAHTAQGAFSPS*NSCDFL Trigger: TAAGAAATCACACGAATTCAATGAAGGAGAGAAGGC...ACCCTGAGCTGTGTGTGCTGAACACACTGTCTTGTTTCTCAGCTGCATCCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR CAA 90 bp | ATCACTTCATACATTTGTGGGGCTCGGTGCCAGCATGAACTTCTTGTCATGAGATGCCAGCTAAAGTCCTaGCCCTTCTCCTTACAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ITSYICGARCQHELLVMRCQLKS*PFSLQS Trigger: TGACTGTAAGGAGAAGGGCAAGGACTTTAGCTGGCA...TCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCCACAAATGTATGAAGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS TCA 90 bp | CCTTTGTTTTCTCTGCTAGCTTCAGTCTTGGACACTGAAGAGCTGTaGGCAGATTCAGAAGGGGCAGTTTGTCACAAGCGAGTGTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: PLFSLLASVLDTEEL*ADSEGAVCHKRVSF Trigger: AAATGACACTCGCTTGTGACAAACTGCCCCTTCTGAATCTGCTCACAGCTCTTCAGTGTCCAAGACTGAAGCTAGCAGAGAAAACAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR CAA 90 bp | GGCATTTCCACATTCTCTCAGGTCCCTTTTGAGAATTTACTATCAGTTAAGTGCAGGGAACCCATGCGGTaGATAAATGCAAAGCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GISTFSQVPFENLLSVKCREPMR*INAKPH Trigger: GTGGGGCTTTGCATTTATCAACCGCATGGGTTCCCT...GCACTTAACTGATAGTAAATTCTCAAAAGGGACCTGAGAGAATGTGGAAATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR CAA 90 bp | AAGTCCAAGATGAAAACTTTTCCATCTCTCTGGGATAGCCAGGTTGCTTGCCAACTCTTGATTCTCACTTaGTGGTGGCTCCTGACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KSKMKTFPSLWDSQVACQLLILT*WWLLTF Trigger: AAAGGTCAGGAGCCACCACAAAGTGAGAATCAAGAG...TTGGCAAGCAACCTGGCTATCCCAGAGAGATGGAAAAGTTTTCATCTTGGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR CAA 90 bp | ATCACTTCATACATTTGTGGGGCTCGGTGCCAGCATGAACTTCTTGTCATGAGATGGGCATTCCTTGCATaGAAAACGTTTCTCCCGAAT | + |
|
Preference number: 5 (lower is better) Translates to: ITSYICGARCQHELLVMRWAFLA*KTFLPN Trigger: ATTCGGGAGAAACGTTTTCAATGCAAGGAATGCCCA...TCTCATGACAAGAAGTTCATGCTGGCACCGAGCCCCACAAATGTATGAAGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS TCA 90 bp | AAAACGTTTCTCCCGAATATGAACTGCCTTGAGGTCTGTATCATGTaGATGCCAGCTAAAGTCCTTGCCCTTCTCCTTACAGTCATACGT | + |
|
Preference number: 5 (lower is better) Translates to: KTFLPNMNCLEVCIM*MPAKVLALLLTVIR Trigger: ACGTATGACTGTAAGGAGAAGGGCAAGGACTTTAGCTGGCATTCACATGATACAGACCTCAAGGCAGTTCATATTCGGGAGAAACGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
||
| CDS-3UTR CAA 90 bp | CAGCATGAACTTCTTGTCATGAGAGGAAAGTCCAAGATGAAAACTTTTCCATCTAGGGAACCCATGCGGTaGATAAATGCAAAGCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QHELLVMRGKSKMKTFPSREPMR*INAKPH Trigger: GTGGGGCTTTGCATTTATCAACCGCATGGGTTCCCT...AGATGGAAAAGTTTTCATCTTGGACTTTCCTCTCATGACAAGAAGTTCATGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR CAA 90 bp | AGGGCATTTCCACATTCTCTCAGGTCCCTTTTGAGAATTTACTATCAGTTAAGTAATCTGCTAGGCTCATaGCCCAAATCCATGCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: RAFPHSLRSLLRIYYQLSNLLGS*PKSMQA Trigger: TGCCTGCATGGATTTGGGCAATGAGCCTAGCAGATT...ACTTAACTGATAGTAAATTCTCAAAAGGGACCTGAGAGAATGTGGAAATGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR CAA 90 bp | TTCCATATTCCTTATATCCAGTTTCCTCTCATGAATTTTCTCCCTTTGAGCAAGCTGGAGCGTTTCCTCTaGATTCTCACTTTGTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: FHIPYIQFPLMNFLPLSKLERFL*ILTLWW Trigger: CCACCACAAAGTGAGAATCAAGAGGAAACGCTCCAG...CTTGCTCAAAGGGAGAAAATTCATGAGAGGAAACTGGATATAAGGAATATGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR CAA 90 bp | ATCCAGGTGTTGACCCAAGCTGCCATGGTAACTAAAATCACTTCATACATTTGTTGGGCATTCCTTGCATaGAAAACGTTTCTCCCGAAT | + |
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Preference number: 5 (lower is better) Translates to: IQVLTQAAMVTKITSYICWAFLA*KTFLPN Trigger: ATTCGGGAGAAACGTTTTCAATGCAAGGAATGCCCA...ACAAATGTATGAAGTGATTTTAGTTACCATGGCAGCTTGGGTCAACACCTGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS-3UTR CAA 90 bp | GGCATTTCCACATTCTCTCAGGTCCCTTTTGAGAATTTACTATCAGTTAAGTGCGCCTTCTCTCCTTCATaGAATTCGTGTGATTTCTTA | + |
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Preference number: 5 (lower is better) Translates to: GISTFSQVPFENLLSVKCAFSPS*NSCDFL Trigger: TAAGAAATCACACGAATTCAATGAAGGAGAGAAGGC...GCACTTAACTGATAGTAAATTCTCAAAAGGGACCTGAGAGAATGTGGAAATGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS GCA 72 bp | TTGTGGTGGCTCCTGACCTTTGCCTTCCCAGTCGGCTaGAGGACACGAGGCTGCAAGCCCGTGCTTTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LWWLLTFAFPVG*RTRGCKPVLWL Trigger: GAGCCAAAGCACGGGCTTGCAGCCTCGTGTCCTGCAGCCGACTGGGAAGGCAAAGGTCAGGAGCCACCACAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS CAA 72 bp | AGTCGGCTGCAGGACACGAGGCTGCAAGCCCGTGCTTaGGCTCCATTCCCATTCCCTCCCAGTGGGACAACC | + |
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Preference number: 6 (lower is better) Translates to: SRLQDTRLQARA*APFPFPPSGTT Trigger: GGTTGTCCCACTGGGAGGGAATGGGAATGGAGCCAAAGCACGGGCTTGCAGCCTCGTGTCCTGCAGCCGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS GCA 72 bp | ACCTTTGCCTTCCCAGTCGGCTGCAGGACACGAGGCTaGAAGCCCGTGCTTTGGCTCCATTCCCATTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: TFAFPVGCRTRG*KPVLWLHSHSL Trigger: GAGGGAATGGGAATGGAGCCAAAGCACGGGCTTGCAGCCTCGTGTCCTGCAGCCGACTGGGAAGGCAAAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS CCA 72 bp | AGCCCGTGCTTTGGCTCCATTCCCATTCCCTCCCAGTaGGACAACCGAGTTGCGCACGTGCTGTTTGTCCGT | + |
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Preference number: 6 (lower is better) Translates to: SPCFGSIPIPSQ*DNRVAHVLFVR Trigger: ACGGACAAACAGCACGTGCGCAACTCGGTTGTCCCACTGGGAGGGAATGGGAATGGAGCCAAAGCACGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS GCA 72 bp | CCATTCCCTCCCAGTGGGACAACCGAGTTGCGCACGTaGTGTTTGTCCGTAGGGCTTTCTTCATCTGCCACC | + |
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Preference number: 6 (lower is better) Translates to: PFPPSGTTELRT*CLSVGLSSSAT Trigger: GGTGGCAGATGAAGAAAGCCCTACGGACAAACAGCACGTGCGCAACTCGGTTGTCCCACTGGGAGGGAATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS CCA 72 bp | CATTTGCTGGAGCGTTTCCTCTTGATTCTCACTTTGTaGTGGCTCCTGACCTTTGCCTTCCCAGTCGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: HLLERFLLILTL*WLLTFAFPVGC Trigger: GCAGCCGACTGGGAAGGCAAAGGTCAGGAGCCACCACAAAGTGAGAATCAAGAGGAAACGCTCCAGCAAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS CAA 72 bp | TCTGCTAGGCTCATTGCCCAAATCCATGCAGGCATCTaGCTCTTTCTCTGGCACAGGGAACCCATGCGGTTG | + |
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Preference number: 6 (lower is better) Translates to: SARLIAQIHAGI*LFLWHREPMRL Trigger: CAACCGCATGGGTTCCCTGTGCCAGAGAAAGAGCAAGATGCCTGCATGGATTTGGGCAATGAGCCTAGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS CAA 72 bp | TGTCATTTGCTGGAGCGTTTCCTCTTGATTCTCACTTaGTGGTGGCTCCTGACCTTTGCCTTCCCAGTCGGC | + |
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Preference number: 6 (lower is better) Translates to: CHLLERFLLILT*WWLLTFAFPVG Trigger: GCCGACTGGGAAGGCAAAGGTCAGGAGCCACCACAAAGTGAGAATCAAGAGGAAACGCTCCAGCAAATGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS CAA 90 bp | GGGCAGTTTGTCACAAGCGAGTGTCATTTGCTGGAGCGTTTCCTCTaGATTCTCACTTTGTGGTGGCTCCTGACCTTTGCCTTCCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: GQFVTSECHLLERFL*ILTLWWLLTFAFPV Trigger: GACTGGGAAGGCAAAGGTCAGGAGCCACCACAAAGTGAGAATCAAGAGGAAACGCTCCAGCAAATGACACTCGCTTGTGACAAACTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS CAA 72 bp | GTCACAAGCGAGTGTCATTTGCTGGAGCGTTTCCTCTaGATTCTCACTTTGTGGTGGCTCCTGACCTTTGCC | + |
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Preference number: 6 (lower is better) Translates to: VTSECHLLERFL*ILTLWWLLTFA Trigger: GGCAAAGGTCAGGAGCCACCACAAAGTGAGAATCAAGAGGAAACGCTCCAGCAAATGACACTCGCTTGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS CAA 72 bp | CGGGAATCTGTATCTGGGCAAAATCTGCTAGGCTCATaGCCCAAATCCATGCAGGCATCTTGCTCTTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: RESVSGQNLLGS*PKSMQASCSFS Trigger: AGAGAAAGAGCAAGATGCCTGCATGGATTTGGGCAATGAGCCTAGCAGATTTTGCCCAGATACAGATTCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS TCA 72 bp | TCCTTTGTTTTCTCTGCTAGCTTCAGTCTTGGACACTaGAGAGCTGTGAGCAGATTCAGAAGGGGCAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: SFVFSASFSLGH*RAVSRFRRGSL Trigger: CAAACTGCCCCTTCTGAATCTGCTCACAGCTCTTCAGTGTCCAAGACTGAAGCTAGCAGAGAAAACAAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS CCA 72 bp | CTCACCTGTGTGAATGAGCTGAAGTTGAGCGGGCTCTaGTGCAAAACTAAAGGATTTTTCCGATTTGACTTC | + |
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Preference number: 6 (lower is better) Translates to: LTCVNELKLSGL*CKTKGFFRFDF Trigger: GAAGTCAAATCGGAAAAATCCTTTAGTTTTGCACCAGAGCCCGCTCAACTTCAGCTCATTCACACAGGTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS GCA 72 bp | ACCTGTGTGAATGAGCTGAAGTTGAGCGGGCTCTGGTaGAAAACTAAAGGATTTTTCCGATTTGACTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: TCVNELKLSGLW*KTKGFFRFDFL Trigger: AAGGAAGTCAAATCGGAAAAATCCTTTAGTTTTGCACCAGAGCCCGCTCAACTTCAGCTCATTCACACAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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| CDS CAA 72 bp | TTGAGGTCTGTATCATGTGAATGCCAGCTAAAGTCCTaGCCCTTCTCCTTACAGTCATACGTTGTCTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: LRSVSCECQLKS*PFSLQSYVVLA Trigger: TGCTAAGACAACGTATGACTGTAAGGAGAAGGGCAAGGACTTTAGCTGGCATTCACATGATACAGACCTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032796.14 ENSMUST00000178162.3 |
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