Pregenerated sensors for ZFP788 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074165Ensembl transcript IDs: ENSMUST00000045720.14, ENSMUST00000098508.9, ENSMUST00000100275.10, ENSMUST00000140964.8, ENSMUST00000170770.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGGTCCTGGGGGCAAGTTTGATCATTGCTGTCAGGATCTCTAACTaGTTTTGGTTTCTTTGCACAGACTACATAACAAATGGTGACCAA | + |
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Preference number: 1 (lower is better) Translates to: EVLGASLIIAVRISN*FWFLCTDYITNGDQ Trigger: TTGGTCACCATTTGTTATGTAGTCTGTGCAAAGAAACCAAAAGCAGTTAGAGATCCTGACAGCAATGATCAAACTTGCCCCCAGGACCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| 3UTR GCA 90 bp | AGTTTGATCATTGCTGTCAGGATCTCTAACTGCTTTTGGTTTCTTTaGACAGACTACATAACAAATGGTGACCAAGAGCAACCAGCAACC | + |
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Preference number: 1 (lower is better) Translates to: SLIIAVRISNCFWFL*TDYITNGDQEQPAT Trigger: GGTTGCTGGTTGCTCTTGGTCACCATTTGTTATGTAGTCTGTGCAAAGAAACCAAAAGCAGTTAGAGATCCTGACAGCAATGATCAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| 3UTR-3UTR CCA 90 bp | GAAAAACCAGAAAATCTTCTCTGGGAGCAGAGCAAGAGACATCCCAGTGGAAGCTGCTTATTAGGGGTGTaGAGGTCCTGGGGGCAAGTT | + |
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Preference number: 2 (lower is better) Translates to: EKPENLLWEQSKRHPSGSCLLGV*RSWGQV Trigger: AACTTGCCCCCAGGACCTCCACACCCCTAATAAGCA...GCTTCCACTGGGATGTCTCTTGCTCTGCTCCCAGAGAAGATTTTCTGGTTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| 3UTR-3UTR CCA 90 bp | TATTGTTTTCCGAGTTCCTCCATTTCCAGCTGCAGTGTTTCCATCTATTCTCCCCCAGAAAATCTTCTCTaGGAGCAGAGCAAGAGACAT | + |
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Preference number: 2 (lower is better) Translates to: YCFPSSSISSCSVSIYSPPENLL*EQSKRH Trigger: ATGTCTCTTGCTCTGCTCCCAGAGAAGATTTTCTGG...GGGAGAATAGATGGAAACACTGCAGCTGGAAATGGAGGAACTCGGAAAACAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| 3UTR-3UTR GCA 90 bp | GTTTTCCGAGTTCCTCCATTTCCAGCTGCAGTGTTTCCATCTATTCTCCCAAACGTCAGGATCTCTAACTaGTTTTGGTTTCTTTGCACA | + |
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Preference number: 2 (lower is better) Translates to: VFRVPPFPAAVFPSILPNVRISN*FWFLCT Trigger: TGTGCAAAGAAACCAAAAGCAGTTAGAGATCCTGAC...GTTTGGGAGAATAGATGGAAACACTGCAGCTGGAAATGGAGGAACTCGGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| 3UTR-3UTR CCA 90 bp | GAAAAACCAGAAAATCTTCTCTGGGAGCAGAGCAAGAGACATCCCAGTGGAAGCATCTCTAACTGCTTTTaGTTTCTTTGCACAGACTAC | + |
|
Preference number: 2 (lower is better) Translates to: EKPENLLWEQSKRHPSGSISNCF*FLCTDY Trigger: GTAGTCTGTGCAAAGAAACCAAAAGCAGTTAGAGAT...GCTTCCACTGGGATGTCTCTTGCTCTGCTCCCAGAGAAGATTTTCTGGTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| 3UTR-3UTR CCA 90 bp | AAGAAAAACCAGAAAATCTTCTCTGGGAGCAGAGCAAGAGACATCCCAGTGGAACCCATACTCCATATCTaGGAGAAAAATGAAAACATA | + |
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Preference number: 2 (lower is better) Translates to: KKNQKIFSGSRARDIPVEPILHI*EKNENI Trigger: TATGTTTTCATTTTTCTCCCAGATATGGAGTATGGG...TTCCACTGGGATGTCTCTTGCTCTGCTCCCAGAGAAGATTTTCTGGTTTTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| 3UTR-3UTR CAA 90 bp | GTTTTCCGAGTTCCTCCATTTCCAGCTGCAGTGTTTCCATCTATTCTCCCAAACCAACAGCCTCGTGTCTaGGGGCCCCAGCATTTATAT | + |
|
Preference number: 3 (lower is better) Translates to: VFRVPPFPAAVFPSILPNQQPRV*GPQHLY Trigger: ATATAAATGCTGGGGCCCCAAGACACGAGGCTGTTG...GTTTGGGAGAATAGATGGAAACACTGCAGCTGGAAATGGAGGAACTCGGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| 3UTR CCA 72 bp | AAATCTTCTCTGGGAGCAGAGCAAGAGACATCCCAGTaGAAGCAGCTGCAATACATTTTGTGCTGGTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: KSSLGAEQETSQ*KQLQYILCWCL Trigger: GAGACACCAGCACAAAATGTATTGCAGCTGCTTCCACTGGGATGTCTCTTGCTCTGCTCCCAGAGAAGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| 3UTR GCA 72 bp | GGGGCAAGTTTGATCATTGCTGTCAGGATCTCTAACTaGTTTTGGTTTCTTTGCACAGACTACATAACAAAT | + |
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Preference number: 3 (lower is better) Translates to: GASLIIAVRISN*FWFLCTDYITN Trigger: ATTTGTTATGTAGTCTGTGCAAAGAAACCAAAAGCAGTTAGAGATCCTGACAGCAATGATCAAACTTGCCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| 3UTR CCA 72 bp | AGTTTGATCATTGCTGTCAGGATCTCTAACTGCTTTTaGTTTCTTTGCACAGACTACATAACAAATGGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: SLIIAVRISNCF*FLCTDYITNGD Trigger: GTCACCATTTGTTATGTAGTCTGTGCAAAGAAACCAAAAGCAGTTAGAGATCCTGACAGCAATGATCAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| CDS-3UTR TCA 90 bp | GGGAGCAGAGCAAGAGACATCCCAGTGGAAGCAGCTGCAATACATTTTGTGCTGGGGAATTGTGATATCTaGAGGAGTTACCACACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSRARDIPVEAAAIHFVLGNCDI*RSYHTV Trigger: AACAGTGTGGTAACTCCTTCAGATATCACAATTCCC...CAGCACAAAATGTATTGCAGCTGCTTCCACTGGGATGTCTCTTGCTCTGCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| CDS-3UTR CCA 90 bp | GGGAGCAGAGCAAGAGACATCCCAGTGGAAGCAGCTGCAATACATTTTGTGCTGATCTTCCAAATGAGCTaGGAAAACCAAAGGATGTGG | + |
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Preference number: 4 (lower is better) Translates to: GSRARDIPVEAAAIHFVLIFQMS*ENQRMW Trigger: CCACATCCTTTGGTTTTCCCAGCTCATTTGGAAGAT...CAGCACAAAATGTATTGCAGCTGCTTCCACTGGGATGTCTCTTGCTCTGCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| CDS-3UTR TCA 90 bp | CCCATGTCAGCCATTTATTGTTTTCCGAGTTCCTCCATTTCCAGCTGCAGTGTTGTTCTATTATGTAACTaGAGGGACCTCTGGCATATG | + |
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Preference number: 4 (lower is better) Translates to: PMSAIYCFPSSSISSCSVVLLCN*RDLWHM Trigger: CATATGCCAGAGGTCCCTTCAGTTACATAATAGAAC...AACACTGCAGCTGGAAATGGAGGAACTCGGAAAACAATAAATGGCTGACATGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| CDS-3UTR TCA 90 bp | GAAAAACCAGAAAATCTTCTCTGGGAGCAGAGCAAGAGACATCCCAGTGGAAGCGTAAGGAGGGAAAAATaGAGGCTTTATCACATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EKPENLLWEQSKRHPSGSVRREK*RLYHIV Trigger: AACAATGTGATAAAGCCTTCATTTTTCCCTCCTTAC...GCTTCCACTGGGATGTCTCTTGCTCTGCTCCCAGAGAAGATTTTCTGGTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| CDS-3UTR CCA 90 bp | CCCATGTCAGCCATTTATTGTTTTCCGAGTTCCTCCATTTCCAGCTGCAGTGTTGATGTTTGTCAGAGTTaGTGTCTTGGTGAAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: PMSAIYCFPSSSISSCSVDVCQS*CLGEDF Trigger: GAAATCTTCACCAAGACACCAACTCTGACAAACATC...AACACTGCAGCTGGAAATGGAGGAACTCGGAAAACAATAAATGGCTGACATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| CDS-3UTR TCA 90 bp | GTTTTCCGAGTTCCTCCATTTCCAGCTGCAGTGTTTCCATCTATTCTCCCAAACGTAAGGATGGATAAATaGAGCACTTACCACATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VFRVPPFPAAVFPSILPNVRMDK*STYHIV Trigger: AACAATGTGGTAAGTGCTTCATTTATCCATCCTTAC...GTTTGGGAGAATAGATGGAAACACTGCAGCTGGAAATGGAGGAACTCGGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| CDS-3UTR GCA 90 bp | GTTTTCCGAGTTCCTCCATTTCCAGCTGCAGTGTTTCCATCTATTCTCCCAAACAAACGAAGGCTTTGCTaGAAATCTTACACTTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: VFRVPPFPAAVFPSILPNKRRLC*KSYTYR Trigger: CCTATAAGTGTAAGATTTGCAGCAAAGCCTTCGTTT...GTTTGGGAGAATAGATGGAAACACTGCAGCTGGAAATGGAGGAACTCGGAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| CDS-3UTR CCA 90 bp | TTTATTGTTTTCCGAGTTCCTCCATTTCCAGCTGCAGTGTTTCCATCTATTCTCGGCTTTTTCCCAGTATaGTTTCTTTCGTGGACTCGA | + |
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Preference number: 4 (lower is better) Translates to: FIVFRVPPFPAAVFPSILGFFPV*FLSWTR Trigger: TCGAGTCCACGAAAGAAACCATACTGGGAAAAAGCC...GAGAATAGATGGAAACACTGCAGCTGGAAATGGAGGAACTCGGAAAACAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| CDS-3UTR TCA 90 bp | AAGAAAAACCAGAAAATCTTCTCTGGGAGCAGAGCAAGAGACATCCCAGTGGAAGTAAATATGGATAAATaGAGGACCTGTCACACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KKNQKIFSGSRARDIPVEVNMDK*RTCHTV Trigger: AACAGTGTGACAGGTCCTTCATTTATCCATATTTAC...TTCCACTGGGATGTCTCTTGCTCTGCTCCCAGAGAAGATTTTCTGGTTTTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| CDS-3UTR TCA 90 bp | GCTGTCAGGATCTCTAACTGCTTTTGGTTTCTTTGCACAGACTACATAACAAATGAGTTGGTGTCTTGGTaGAGATTTCTCCAGATTGAT | + |
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Preference number: 4 (lower is better) Translates to: AVRISNCFWFLCTDYITNELVSW*RFLQID Trigger: ATCAATCTGGAGAAATCTTCACCAAGACACCAACTC...ATTTGTTATGTAGTCTGTGCAAAGAAACCAAAAGCAGTTAGAGATCCTGACAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| CDS-3UTR TCA 90 bp | AGGATCTCTAACTGCTTTTGGTTTCTTTGCACAGACTACATAACAAATGGTGACAAGATTTCTCCAGATTaGTCACCTTCAGTACTCTCA | + |
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Preference number: 4 (lower is better) Translates to: RISNCFWFLCTDYITNGDKISPD*SPSVLS Trigger: TGAGAGTACTGAAGGTGATCAATCTGGAGAAATCTT...GTCACCATTTGTTATGTAGTCTGTGCAAAGAAACCAAAAGCAGTTAGAGATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| CDS-3UTR TCA 90 bp | ATTTATATACCCTCTGAAAAGTCCCCAGAATTCCAAATGTCACGTAATCACAGACCAACAGGAGTTTCTTaGTATCTTCCAAATGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: IYIPSEKSPEFQMSRNHRPTGVS*YLPNEL Trigger: CAGCTCATTTGGAAGATATCAAGAAACTCCTGTTGG...TCTGTGATTACGTGACATTTGGAATTCTGGGGACTTTTCAGAGGGTATATAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| CDS-3UTR CCA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTGGCTTTTTCCCAGTATaGTTTCTTTCGTGGACTCGA | + |
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Preference number: 4 (lower is better) Translates to: HLKRMITSEGYPTLYSYCGFFPV*FLSWTR Trigger: TCGAGTCCACGAAAGAAACCATACTGGGAAAAAGCC...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS-3UTR TCA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTGAGTTGGTGTCTTGGTaGAGATTTCTCCAGATTGAT | + |
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Preference number: 4 (lower is better) Translates to: HLKRMITSEGYPTLYSYCELVSW*RFLQID Trigger: ATCAATCTGGAGAAATCTTCACCAAGACACCAACTC...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS-3UTR TCA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTCCAACAGGAGTTTCTTaGTATCTTCCAAATGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: HLKRMITSEGYPTLYSYCPTGVS*YLPNEL Trigger: CAGCTCATTTGGAAGATATCAAGAAACTCCTGTTGG...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS-3UTR TCA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTGTTCTATTATGTAACTaGAGGGACCTCTGGCATATG | + |
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Preference number: 4 (lower is better) Translates to: HLKRMITSEGYPTLYSYCVLLCN*RDLWHM Trigger: CATATGCCAGAGGTCCCTTCAGTTACATAATAGAAC...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS-3UTR TCA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTGGGAATTGTGATATCTaGAGGAGTTACCACACTGTT | + |
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Preference number: 4 (lower is better) Translates to: HLKRMITSEGYPTLYSYCGNCDI*RSYHTV Trigger: AACAGTGTGGTAACTCCTTCAGATATCACAATTCCC...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS-3UTR GCA 90 bp | AGGATCTCTAACTGCTTTTGGTTTCTTTGCACAGACTACATAACAAATGGTGACTGTTCACATTTATATTaGATCCCGCCACTTTCATCA | + |
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Preference number: 4 (lower is better) Translates to: RISNCFWFLCTDYITNGDCSHLY*IPPLSS Trigger: TGATGAAAGTGGCGGGATGCAATATAAATGTGAACA...GTCACCATTTGTTATGTAGTCTGTGCAAAGAAACCAAAAGCAGTTAGAGATCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| CDS-3UTR CCA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTATCTTCCAAATGAGCTaGGAAAACCAAAGGATGTGG | + |
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Preference number: 4 (lower is better) Translates to: HLKRMITSEGYPTLYSYCIFQMS*ENQRMW Trigger: CCACATCCTTTGGTTTTCCCAGCTCATTTGGAAGAT...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS-3UTR TCA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTAAGATTTCTCCAGATTaGTCACCTTCAGTACTCTCA | + |
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Preference number: 4 (lower is better) Translates to: HLKRMITSEGYPTLYSYCKISPD*SPSVLS Trigger: TGAGAGTACTGAAGGTGATCAATCTGGAGAAATCTT...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS-3UTR TCA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTTTGATATCTTCCAAATaGGCTGGGAAAACCAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: HLKRMITSEGYPTLYSYCLISSK*AGKTKG Trigger: TCCTTTGGTTTTCCCAGCTCATTTGGAAGATATCAA...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS-3UTR CCA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTGATGTTTGTCAGAGTTaGTGTCTTGGTGAAGATTTC | + |
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Preference number: 4 (lower is better) Translates to: HLKRMITSEGYPTLYSYCDVCQS*CLGEDF Trigger: GAAATCTTCACCAAGACACCAACTCTGACAAACATC...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS-3UTR CCA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTCGGAGCTCTACCAAATaGTTTGTGTTCATTATCGAT | + |
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Preference number: 4 (lower is better) Translates to: HLKRMITSEGYPTLYSYCRSSTK*FVFIID Trigger: ATCGATAATGAACACAAACCATTTGGTAGAGCTCCG...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS-3UTR TCA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTGTAAGGAGGGAAAAATaGAGGCTTTATCACATTGTT | + |
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Preference number: 4 (lower is better) Translates to: HLKRMITSEGYPTLYSYCVRREK*RLYHIV Trigger: AACAATGTGATAAAGCCTTCATTTTTCCCTCCTTAC...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS-3UTR TCA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTGTAAATATGGATAAATaGAGGACCTGTCACACTGTT | + |
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Preference number: 4 (lower is better) Translates to: HLKRMITSEGYPTLYSYCVNMDK*RTCHTV Trigger: AACAGTGTGACAGGTCCTTCATTTATCCATATTTAC...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS-3UTR TCA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTGTAAGGATGGATAAATaGAGCACTTACCACATTGTT | + |
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Preference number: 4 (lower is better) Translates to: HLKRMITSEGYPTLYSYCVRMDK*STYHIV Trigger: AACAATGTGGTAAGTGCTTCATTTATCCATCCTTAC...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS-3UTR GCA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTTGTTCACATTTATATTaGATCCCGCCACTTTCATCA | + |
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Preference number: 4 (lower is better) Translates to: HLKRMITSEGYPTLYSYCCSHLY*IPPLSS Trigger: TGATGAAAGTGGCGGGATGCAATATAAATGTGAACA...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS-3UTR GCA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTAAACGAAGGCTTTGCTaGAAATCTTACACTTATAGG | + |
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Preference number: 4 (lower is better) Translates to: HLKRMITSEGYPTLYSYCKRRLC*KSYTYR Trigger: CCTATAAGTGTAAGATTTGCAGCAAAGCCTTCGTTT...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS-3UTR GCA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTGATAAACGAAGGCTTTaGTGCAAATCTTACACTTAT | + |
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Preference number: 4 (lower is better) Translates to: HLKRMITSEGYPTLYSYCDKRRL*CKSYTY Trigger: ATAAGTGTAAGATTTGCAGCAAAGCCTTCGTTTATC...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS-3UTR CAA 90 bp | CCAGCATTTATATACCCTCTGAAAAGTCCCCAGAATTCCAAATGTCACGTAATCCTTTGGTCTTCCCATTaGTTTCCGACACAAGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: PAFIYPLKSPQNSKCHVILWSSH*FPTQAR Trigger: CCTTGCTTGTGTCGGAAACAAATGGGAAGACCAAAG...GATTACGTGACATTTGGAATTCTGGGGACTTTTCAGAGGGTATATAAATGCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| CDS-3UTR CAA 90 bp | AGGATCTCTAACTGCTTTTGGTTTCTTTGCACAGACTACATAACAAATGGTGACGACCAGGGAAGATGTTaGTCAGAGTTGGTGTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: RISNCFWFLCTDYITNGDDQGRC*SELVSW Trigger: CCAAGACACCAACTCTGACAAACATCTTCCCTGGTC...GTCACCATTTGTTATGTAGTCTGTGCAAAGAAACCAAAAGCAGTTAGAGATCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| CDS GCA 90 bp | GTAACAGAATTCAGGTCTGTTTTCCAAGTCTGTTCACATTTATATTaGATCCCGCCACTTTCATCAAGCTCAGATTTTAGACCAGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: VTEFRSVFQVCSHLY*IPPLSSSSDFRPGK Trigger: CTTCCCTGGTCTAAAATCTGAGCTTGATGAAAGTGGCGGGATGCAATATAAATGTGAACAGACTTGGAAAACAGACCTGAATTCTGTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 ENSMUST00000140964.8 ENSMUST00000170770.2 |
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| CDS-3UTR CAA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTGACCAGGGAAGATGTTaGTCAGAGTTGGTGTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: HLKRMITSEGYPTLYSYCDQGRC*SELVSW Trigger: CCAAGACACCAACTCTGACAAACATCTTCCCTGGTC...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS-3UTR CAA 90 bp | CCAGCATTTATATACCCTCTGAAAAGTCCCCAGAATTCCAAATGTCACGTAATCCTGTTCACATTTATATaGCATCCCGCCACTTTCATC | + |
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Preference number: 5 (lower is better) Translates to: PAFIYPLKSPQNSKCHVILFTFI*HPATFI Trigger: GATGAAAGTGGCGGGATGCAATATAAATGTGAACAG...GATTACGTGACATTTGGAATTCTGGGGACTTTTCAGAGGGTATATAAATGCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| CDS-3UTR CAA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTCTTTGGTCTTCCCATTaGTTTCCGACACAAGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: HLKRMITSEGYPTLYSYCLWSSH*FPTQAR Trigger: CCTTGCTTGTGTCGGAAACAAATGGGAAGACCAAAG...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS-3UTR CAA 90 bp | ATTTATATACCCTCTGAAAAGTCCCCAGAATTCCAAATGTCACGTAATCACAGACTCATCTTCCATGCTTaGGTCTTCCCATTTGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: IYIPSEKSPEFQMSRNHRLIFHA*VFPFVS Trigger: GGAAACAAATGGGAAGACCAAAGCATGGAAGATGAG...TCTGTGATTACGTGACATTTGGAATTCTGGGGACTTTTCAGAGGGTATATAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| CDS-3UTR CAA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTCTCATCTTCCATGCTTaGGTCTTCCCATTTGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: HLKRMITSEGYPTLYSYCLIFHA*VFPFVS Trigger: GGAAACAAATGGGAAGACCAAAGCATGGAAGATGAG...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS-3UTR CAA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTGTCAGAGTTGGTGTCTaGGTGAAGATTTCTCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: HLKRMITSEGYPTLYSYCVRVGV*VKISPD Trigger: ATCTGGAGAAATCTTCACCAAGACACCAACTCTGAC...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS-3UTR CAA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTCTGTTCACATTTATATaGCATCCCGCCACTTTCATC | + |
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Preference number: 5 (lower is better) Translates to: HLKRMITSEGYPTLYSYCLFTFI*HPATFI Trigger: GATGAAAGTGGCGGGATGCAATATAAATGTGAACAG...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS-3UTR CAA 90 bp | GCTGTCAGGATCTCTAACTGCTTTTGGTTTCTTTGCACAGACTACATAACAAATGATTTTACCACACTGTaGACACTGATAGGATTTTTC | + |
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Preference number: 5 (lower is better) Translates to: AVRISNCFWFLCTDYITNDFTTL*TLIGFF Trigger: GAAAAATCCTATCAGTGTCAACAGTGTGGTAAAATC...ATTTGTTATGTAGTCTGTGCAAAGAAACCAAAAGCAGTTAGAGATCCTGACAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| CDS-3UTR CAA 90 bp | ATTTATATACCCTCTGAAAAGTCCCCAGAATTCCAAATGTCACGTAATCACAGATTATCGATGTCTGCATaGTCATTCATTTCATGGATG | + |
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Preference number: 5 (lower is better) Translates to: IYIPSEKSPEFQMSRNHRLSMSA*SFISWM Trigger: CATCCATGAAATGAATGACAATGCAGACATCGATAA...TCTGTGATTACGTGACATTTGGAATTCTGGGGACTTTTCAGAGGGTATATAAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098508.9 |
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| CDS-3UTR CAA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTTTATCGATGTCTGCATaGTCATTCATTTCATGGATG | + |
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Preference number: 5 (lower is better) Translates to: HLKRMITSEGYPTLYSYCLSMSA*SFISWM Trigger: CATCCATGAAATGAATGACAATGCAGACATCGATAA...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS-3UTR CAA 90 bp | CATTTGAAAAGGATGATTACTTCAGAAGGCTATCCCACTTTATACTCATACTGTGATTTTACCACACTGTaGACACTGATAGGATTTTTC | + |
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Preference number: 5 (lower is better) Translates to: HLKRMITSEGYPTLYSYCDFTTL*TLIGFF Trigger: GAAAAATCCTATCAGTGTCAACAGTGTGGTAAAATC...ACAGTATGAGTATAAAGTGGGATAGCCTTCTGAAGTAATCATCCTTTTCAAATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 |
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| CDS CCA 72 bp | CTCCAACAGGAGTTTCTTGATATCTTCCAAATGAGCTaGGAAAACCAAAGGATGTGGCACAAACGTTATAAG | + |
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Preference number: 6 (lower is better) Translates to: LQQEFLDIFQMS*ENQRMWHKRYK Trigger: CTTATAACGTTTGTGCCACATCCTTTGGTTTTCCCAGCTCATTTGGAAGATATCAAGAAACTCCTGTTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 ENSMUST00000140964.8 ENSMUST00000170770.2 |
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| CDS GCA 72 bp | TTCAGGTCTGTTTTCCAAGTCTGTTCACATTTATATTaGATCCCGCCACTTTCATCAAGCTCAGATTTTAGA | + |
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Preference number: 6 (lower is better) Translates to: FRSVFQVCSHLY*IPPLSSSSDFR Trigger: TCTAAAATCTGAGCTTGATGAAAGTGGCGGGATGCAATATAAATGTGAACAGACTTGGAAAACAGACCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000045720.14 ENSMUST00000098508.9 ENSMUST00000100275.10 ENSMUST00000140964.8 ENSMUST00000170770.2 |
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