Pregenerated sensors for ZFP784 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043290Ensembl transcript IDs: ENSMUST00000062428.5
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGACCAGAACCAGGTTCCCTTTTTCATCTAACTCCAACTGCTCATaGTTTCTCCTTGGCCTCTGCCTCTATTTGCCCACCCACCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: ETRTRFPFSSNSNCS*FLLGLCLYLPTHLS Trigger: GGAGAGGTGGGTGGGCAAATAGAGGCAGAGGCCAAGGAGAAATCATGAGCAGTTGGAGTTAGATGAAAAAGGGAACCTGGTTCTGGTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR TCA 90 bp | CTTCTGCACTGGAGGGTAGGCATCCCAGGACCAGTGCAATCCAGTTaGAGTAGGCAAAACATTTCATTGGACCAGAGGTGGTGGTACAGA | + |
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Preference number: 1 (lower is better) Translates to: LLHWRVGIPGPVQSS*SRQNISLDQRWWYR Trigger: TCTGTACCACCACCTCTGGTCCAATGAAATGTTTTGCCTACTTCAACTGGATTGCACTGGTCCTGGGATGCCTACCCTCCAGTGCAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR GCA 90 bp | CTAACTCCAACTGCTCATGATTTCTCCTTGGCCTCTGCCTCTATTTaGCCACCCACCTCTCCTACGATATGTCCTAGCTTCCAGCCTACT | + |
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Preference number: 1 (lower is better) Translates to: LTPTAHDFSLASASI*PPTSPTICPSFQPT Trigger: AGTAGGCTGGAAGCTAGGACATATCGTAGGAGAGGTGGGTGGGCAAATAGAGGCAGAGGCCAAGGAGAAATCATGAGCAGTTGGAGTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR GCA 90 bp | AGGCAAAACATTTCATTGGACCAGAGGTGGTGGTACAGAAAGTCTTaGTTTCCAGCCTGGTCTGGTCTGGACCTCATGATCCTCCTGCCT | + |
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Preference number: 1 (lower is better) Translates to: RQNISLDQRWWYRKS*FPAWSGLDLMILLP Trigger: AGGCAGGAGGATCATGAGGTCCAGACCAGACCAGGCTGGAAAGCAAGACTTTCTGTACCACCACCTCTGGTCCAATGAAATGTTTTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR CCA 90 bp | ACCCCAAGTACCTCTTTCCTGAGTCTCAAGTGTAGCATGGGTTTCTaGGAGACCAGAACCAGGTTCCCTTTTTCATCTAACTCCAACTGC | + |
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Preference number: 1 (lower is better) Translates to: TPSTSFLSLKCSMGF*ETRTRFPFSSNSNC Trigger: GCAGTTGGAGTTAGATGAAAAAGGGAACCTGGTTCTGGTCTCCCAGAAACCCATGCTACACTTGAGACTCAGGAAAGAGGTACTTGGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR TCA 90 bp | AGAGCCCACTATGGGGTAGGATGGAGAAGTGAGCAGGGCTTAGAGTaGATCTTTATGAGCAGGTTCACATCTGAGAGATGTGGTTTAGGT | + |
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Preference number: 1 (lower is better) Translates to: RAHYGVGWRSEQGLE*IFMSRFTSERCGLG Trigger: ACCTAAACCACATCTCTCAGATGTGAACCTGCTCATAAAGATTCACTCTAAGCCCTGCTCACTTCTCCATCCTACCCCATAGTGGGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR GCA 90 bp | CTCCTGCCTCAGCCTCTAGTGTACTGGGATTACAGGCCTTTACCATaGCCAGCTGTCTATGTATTTTTAGATATATCTGGGTACCCACAG | + |
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Preference number: 1 (lower is better) Translates to: LLPQPLVYWDYRPLP*PAVYVFLDISGYPQ Trigger: CTGTGGGTACCCAGATATATCTAAAAATACATAGACAGCTGGGCATGGTAAAGGCCTGTAATCCCAGTACACTAGAGGCTGAGGCAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR GCA 90 bp | TATAGACAGGTTCTGAGCCTAAGGCTTAAAGGGATACCAAGTGATTaGCTGCTTATAGTGTGTGCTCTCAGTTGCTTGCAACTAAGTTTA | + |
|
Preference number: 1 (lower is better) Translates to: YRQVLSLRLKGIPSD*LLIVCALSCLQLSL Trigger: TAAACTTAGTTGCAAGCAACTGAGAGCACACACTATAAGCAGGCAATCACTTGGTATCCCTTTAAGCCTTAGGCTCAGAACCTGTCTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR-3UTR CCA 90 bp | GGGTTAAAGAGAGCCCACTATGGGGTAGGATGGAGAAGTGAGCAGGGCTTAGAGTGTAGCATGGGTTTCTaGGAGACCAGAACCAGGTTC | + |
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Preference number: 2 (lower is better) Translates to: GLKRAHYGVGWRSEQGLECSMGF*ETRTRF Trigger: GAACCTGGTTCTGGTCTCCCAGAAACCCATGCTACA...CTCTAAGCCCTGCTCACTTCTCCATCCTACCCCATAGTGGGCTCTCTTTAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR-3UTR TCA 90 bp | GTTTTGAGGGGAAGGTATCCCAGCATCCCTTTAGAGATGACTTGGTGGGCATCTAACTCCAACTGCTCATaGTTTCTCCTTGGCCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: VLRGRYPSIPLEMTWWASNSNCS*FLLGLC Trigger: GCAGAGGCCAAGGAGAAATCATGAGCAGTTGGAGTT...AGATGCCCACCAAGTCATCTCTAAAGGGATGCTGGGATACCTTCCCCTCAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCAGTTGCTTGCAACTAAGTTTAGTGGGTTAAAGAGAGCCCACTATGGGGTAGCCTCTGCCTCTATTTaGCCACCCACCTCTCCTACG | + |
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Preference number: 2 (lower is better) Translates to: SQLLATKFSGLKRAHYGVASASI*PPTSPT Trigger: CGTAGGAGAGGTGGGTGGGCAAATAGAGGCAGAGGC...TACCCCATAGTGGGCTCTCTTTAACCCACTAAACTTAGTTGCAAGCAACTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR-3UTR CCA 90 bp | ACTCTCGGTTTTGAGGGGAAGGTATCCCAGCATCCCTTTAGAGATGACTTGGTGTCATTGGACCAGAGGTaGTGGTACAGAAAGTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: TLGFEGKVSQHPFRDDLVSLDQR*WYRKSC Trigger: GCAAGACTTTCTGTACCACCACCTCTGGTCCAATGA...CACCAAGTCATCTCTAAAGGGATGCTGGGATACCTTCCCCTCAAAACCGAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR-3UTR GCA 90 bp | AGTCTTTTAATAGGAACAGACTGGAAGTCCCCACTCTTACCCTGTACGCTAACTTTTCTCCTTGGCCTCTaGCTCTATTTGCCCACCCAC | + |
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Preference number: 2 (lower is better) Translates to: SLLIGTDWKSPLLPCTLTFLLGL*LYLPTH Trigger: GTGGGTGGGCAAATAGAGGCAGAGGCCAAGGAGAAA...AGTTAGCGTACAGGGTAAGAGTGGGGACTTCCAGTCTGTTCCTATTAAAAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR-3UTR CCA 90 bp | CTCTTTGGAGGAGCTGGTGAGTTTTTATTATGCATCATCCGAGGATCGTCTCTTCTCATGATTTCTCCTTaGCCTCTGCCTCTATTTGCC | + |
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Preference number: 2 (lower is better) Translates to: LFGGAGEFLLCIIRGSSLLMISP*PLPLFA Trigger: GGCAAATAGAGGCAGAGGCCAAGGAGAAATCATGAG...AAGAGACGATCCTCGGATGATGCATAATAAAAACTCACCAGCTCCTCCAAAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGACTGAACTAGCAACACATCTCCATGAGAAAATTAGGGACCCTTCTGAGCCTTTAGAGATGACTTaGTGGGCATCTTCTGCACTG | + |
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Preference number: 2 (lower is better) Translates to: TRTELATHLHEKIRDPSEPLEMT*WASSAL Trigger: CAGTGCAGAAGATGCCCACCAAGTCATCTCTAAAGG...CTCAGAAGGGTCCCTAATTTTCTCATGGAGATGTGTTGCTAGTTCAGTCCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR-3UTR TCA 90 bp | TACAGAAAGTCTTTTAATAGGAACAGACTGGAAGTCCCCACTCTTACCCTGTACCAAGTACCTCTTTCCTaGGTCTCAAGTGTAGCATGG | + |
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Preference number: 2 (lower is better) Translates to: YRKSFNRNRLEVPTLTLYQVPLS*VSSVAW Trigger: CCATGCTACACTTGAGACTCAGGAAAGAGGTACTTG...GTACAGGGTAAGAGTGGGGACTTCCAGTCTGTTCCTATTAAAAGACTTTCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR-3UTR TCA 90 bp | CAAGTCCTTTTAGCCCCTTACCACAGTGTCATTTCTTTCTTTACACCCTGTACTGAGCAGGTTCACATCTaGGAGATGTGGTTTAGGTAC | + |
|
Preference number: 2 (lower is better) Translates to: QVLLAPYHSVISFFTPCTEQVHI*EMWFRY Trigger: GTACCTAAACCACATCTCTCAGATGTGAACCTGCTC...AGTACAGGGTGTAAAGAAAGAAATGACACTGTGGTAAGGGGCTAAAAGGACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR-3UTR GCA 90 bp | TACAGAAAGTCTTTTAATAGGAACAGACTGGAAGTCCCCACTCTTACCCTGTACGGCTATGCAGGAAGATaGCTACTTCAGAGTGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: YRKSFNRNRLEVPTLTLYGYAGR*LLQSAE Trigger: TTCTGCACTCTGAAGTAGGCATCTTCCTGCATAGCC...GTACAGGGTAAGAGTGGGGACTTCCAGTCTGTTCCTATTAAAAGACTTTCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR-3UTR CCA 90 bp | AACTTCTTACAACACAACCAAATAGACATCTCCAAACAGCCCAAGCCTGGTCACTTGGACCAGAGGTGGTaGTACAGAAAGTCTTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: NFLQHNQIDISKQPKPGHLDQRW*YRKSCF Trigger: AAAGCAAGACTTTCTGTACCACCACCTCTGGTCCAA...GTGACCAGGCTTGGGCTGTTTGGAGATGTCTATTTGGTTGTGTTGTAAGAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR-3UTR GCA 90 bp | TGCTGGATGACAAGGACTGAACTAGCAACACATCTCCATGAGAAAATTAGGGACATGCCTACTTCAGAGTaGAGAATAGAGAGATGGGAA | + |
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Preference number: 2 (lower is better) Translates to: CWMTRTELATHLHEKIRDMPTSE*RIERWE Trigger: TTCCCATCTCTCTATTCTGCACTCTGAAGTAGGCAT...GTCCCTAATTTTCTCATGGAGATGTGTTGCTAGTTCAGTCCTTGTCATCCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGACTGAACTAGCAACACATCTCCATGAGAAAATTAGGGACCCTTCTGAGAACTACCCAGAGAATTaGAATACAAGACTGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: TRTELATHLHEKIRDPSENYPEN*NTRLTE Trigger: CTCTGTCAGTCTTGTATTCCAATTCTCTGGGTAGTT...CTCAGAAGGGTCCCTAATTTTCTCATGGAGATGTGTTGCTAGTTCAGTCCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR-3UTR TCA 90 bp | TGCTGGATGACAAGGACTGAACTAGCAACACATCTCCATGAGAAAATTAGGGACATTGGAATACAAGACTaGCAGAGAAGACTTACAGAA | + |
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Preference number: 2 (lower is better) Translates to: CWMTRTELATHLHEKIRDIGIQD*QRRLTE Trigger: TTCTGTAAGTCTTCTCTGTCAGTCTTGTATTCCAAT...GTCCCTAATTTTCTCATGGAGATGTGTTGCTAGTTCAGTCCTTGTCATCCAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR CCA 72 bp | CAGAGGTGGTGGTACAGAAAGTCTTGCTTTCCAGCCTaGTCTGGTCTGGACCTCATGATCCTCCTGCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: QRWWYRKSCFPA*SGLDLMILLPQ Trigger: CTGAGGCAGGAGGATCATGAGGTCCAGACCAGACCAGGCTGGAAAGCAAGACTTTCTGTACCACCACCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR CCA 72 bp | GGAAGGTATCCCAGCATCCCTTTAGAGATGACTTGGTaGGCATCTTCTGCACTGGAGGGTAGGCATCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: GRYPSIPLEMTW*ASSALEGRHPR Trigger: CCTGGGATGCCTACCCTCCAGTGCAGAAGATGCCCACCAAGTCATCTCTAAAGGGATGCTGGGATACCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR TCA 72 bp | TATCTGGGTACCCACAGACCCCAAGTACCTCTTTCCTaGGTCTCAAGTGTAGCATGGGTTTCTGGGAGACCA | + |
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Preference number: 3 (lower is better) Translates to: YLGTHRPQVPLS*VSSVAWVSGRP Trigger: TGGTCTCCCAGAAACCCATGCTACACTTGAGACTCAGGAAAGAGGTACTTGGGGTCTGTGGGTACCCAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR GCA 72 bp | ACTGCTCATGATTTCTCCTTGGCCTCTGCCTCTATTTaGCCACCCACCTCTCCTACGATATGTCCTAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: TAHDFSLASASI*PPTSPTICPSF Trigger: GAAGCTAGGACATATCGTAGGAGAGGTGGGTGGGCAAATAGAGGCAGAGGCCAAGGAGAAATCATGAGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR-3UTR CAA 90 bp | TGTATTTTTAGATATATCTGGGTACCCACAGACCCCAAGTACCTCTTTCCTGAGGGCCTCTGCCTCTATTaGCCCACCCACCTCTCCTAC | + |
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Preference number: 3 (lower is better) Translates to: CIFRYIWVPTDPKYLFPEGLCLY*PTHLSY Trigger: GTAGGAGAGGTGGGTGGGCAAATAGAGGCAGAGGCC...CTCAGGAAAGAGGTACTTGGGGTCTGTGGGTACCCAGATATATCTAAAAATACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR GCA 72 bp | ATTTCATTGGACCAGAGGTGGTGGTACAGAAAGTCTTaGTTTCCAGCCTGGTCTGGTCTGGACCTCATGATC | + |
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Preference number: 3 (lower is better) Translates to: ISLDQRWWYRKS*FPAWSGLDLMI Trigger: GATCATGAGGTCCAGACCAGACCAGGCTGGAAAGCAAGACTTTCTGTACCACCACCTCTGGTCCAATGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR GCA 72 bp | AGCAGGCTCTTTGGAGGAGCTGGTGAGTTTTTATTATaGATCATCCGAGGATCGTCTCTTGGGGATGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: SRLFGGAGEFLL*IIRGSSLGDAG Trigger: TCCAGCATCCCCAAGAGACGATCCTCGGATGATGCATAATAAAAACTCACCAGCTCCTCCAAAGAGCCTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR TCA 72 bp | ACCAGGTTCCCTTTTTCATCTAACTCCAACTGCTCATaGTTTCTCCTTGGCCTCTGCCTCTATTTGCCCACC | + |
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Preference number: 3 (lower is better) Translates to: TRFPFSSNSNCS*FLLGLCLYLPT Trigger: GGTGGGCAAATAGAGGCAGAGGCCAAGGAGAAATCATGAGCAGTTGGAGTTAGATGAAAAAGGGAACCTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR TCA 72 bp | GTTAAAGAGAGCCCACTATGGGGTAGGATGGAGAAGTaGGCAGGGCTTAGAGTGAATCTTTATGAGCAGGTT | + |
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Preference number: 3 (lower is better) Translates to: VKESPLWGRMEK*AGLRVNLYEQV Trigger: AACCTGCTCATAAAGATTCACTCTAAGCCCTGCTCACTTCTCCATCCTACCCCATAGTGGGCTCTCTTTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR CCA 72 bp | ACCTCTTTCCTGAGTCTCAAGTGTAGCATGGGTTTCTaGGAGACCAGAACCAGGTTCCCTTTTTCATCTAAC | + |
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Preference number: 3 (lower is better) Translates to: TSFLSLKCSMGF*ETRTRFPFSSN Trigger: GTTAGATGAAAAAGGGAACCTGGTTCTGGTCTCCCAGAAACCCATGCTACACTTGAGACTCAGGAAAGAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR-3UTR CAA 90 bp | ACAAGGACTGAACTAGCAACACATCTCCATGAGAAAATTAGGGACCCTTCTGAGAGGCAAAACATTTCATaGGACCAGAGGTGGTGGTAC | + |
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Preference number: 3 (lower is better) Translates to: TRTELATHLHEKIRDPSERQNIS*DQRWWY Trigger: GTACCACCACCTCTGGTCCAATGAAATGTTTTGCCT...CTCAGAAGGGTCCCTAATTTTCTCATGGAGATGTGTTGCTAGTTCAGTCCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR-3UTR CAA 90 bp | AATAGACATCTCCAAACAGCCCAAGCCTGGTCACTCACCATTCCAGATAATGGATGTGCTCTCAGTTGCTaGCAACTAAGTTTAGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: NRHLQTAQAWSLTIPDNGCALSC*QLSLVG Trigger: ACCCACTAAACTTAGTTGCAAGCAACTGAGAGCACA...TCCATTATCTGGAATGGTGAGTGACCAGGCTTGGGCTGTTTGGAGATGTCTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR TCA 72 bp | TATGGGGTAGGATGGAGAAGTGAGCAGGGCTTAGAGTaGATCTTTATGAGCAGGTTCACATCTGAGAGATGT | + |
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Preference number: 3 (lower is better) Translates to: YGVGWRSEQGLE*IFMSRFTSERC Trigger: ACATCTCTCAGATGTGAACCTGCTCATAAAGATTCACTCTAAGCCCTGCTCACTTCTCCATCCTACCCCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR GCA 72 bp | GTTCTGAGCCTAAGGCTTAAAGGGATACCAAGTGATTaGCTGCTTATAGTGTGTGCTCTCAGTTGCTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: VLSLRLKGIPSD*LLIVCALSCLQ Trigger: TTGCAAGCAACTGAGAGCACACACTATAAGCAGGCAATCACTTGGTATCCCTTTAAGCCTTAGGCTCAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR GCA 72 bp | CAGCCTCTAGTGTACTGGGATTACAGGCCTTTACCATaGCCAGCTGTCTATGTATTTTTAGATATATCTGGG | + |
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Preference number: 3 (lower is better) Translates to: QPLVYWDYRPLP*PAVYVFLDISG Trigger: CCCAGATATATCTAAAAATACATAGACAGCTGGGCATGGTAAAGGCCTGTAATCCCAGTACACTAGAGGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| 3UTR CCA 72 bp | CAGTGCAATCCAGTTGAAGTAGGCAAAACATTTCATTaGACCAGAGGTGGTGGTACAGAAAGTCTTGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: QCNPVEVGKTFH*TRGGGTESLAF Trigger: GAAAGCAAGACTTTCTGTACCACCACCTCTGGTCCAATGAAATGTTTTGCCTACTTCAACTGGATTGCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS-3UTR GCA 90 bp | CCCAGGGCTATGCAGGAAGATGCCTACTTCAGAGTGCAGAATAGAGAGATGGGAGGCCGCTCCCCTGTATaGACCCGCTCGTGGTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: PRAMQEDAYFRVQNREMGGRSPV*TRSWSR Trigger: GCGAGACCACGAGCGGGTGCATACAGGGGAGCGGCC...TCCCATCTCTCTATTCTGCACTCTGAAGTAGGCATCTTCCTGCATAGCCCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS-3UTR CCA 90 bp | GATTTCTCCTTGGCCTCTGCCTCTATTTGCCCACCCACCTCTCCTACGATATGTCAGGCTAGCAGGACCTaGACAGCTGTGGCCACACAC | + |
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Preference number: 4 (lower is better) Translates to: DFSLASASICPPTSPTICQASRT*TAVATH Trigger: GTGTGTGGCCACAGCTGTCCAGGTCCTGCTAGCCTG...ACATATCGTAGGAGAGGTGGGTGGGCAAATAGAGGCAGAGGCCAAGGAGAAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS-3UTR GCA 90 bp | AGCTTCCAGCCTACTGGTCAACCTCCACATTCACTTTCACAGTCTCTCTACACCGTGCCGGAGCAGAGGTaGCAAGGCCTTAAAAGCCCG | + |
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Preference number: 4 (lower is better) Translates to: SFQPTGQPPHSLSQSLYTVPEQR*QGLKSP Trigger: CGGGCTTTTAAGGCCTTGGCACCTCTGCTCCGGCAC...GGTGTAGAGAGACTGTGAAAGTGAATGTGGAGGTTGACCAGTAGGCTGGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS-3UTR CCA 90 bp | GATTTCTCCTTGGCCTCTGCCTCTATTTGCCCACCCACCTCTCCTACGATATGTTGGAAGTGGGTGCGCTaGTGTTTGCGGAAGTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: DFSLASASICPPTSPTICWKWVR*CLRKLE Trigger: CTCCAACTTCCGCAAACACCAGCGCACCCACTTCCA...ACATATCGTAGGAGAGGTGGGTGGGCAAATAGAGGCAGAGGCCAAGGAGAAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS-3UTR TCA 90 bp | GAAGCAGGCTCTTTGGAGGAGCTGGTGAGTTTTTATTATGCATCATCCGAGGATGTGTGGATGCGGGCATaGCCACTCAGCACAGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: EAGSLEELVSFYYASSEDVWMRA*PLSTED Trigger: GTCCTCTGTGCTGAGTGGTCATGCCCGCATCCACAC...ATCCTCGGATGATGCATAATAAAAACTCACCAGCTCCTCCAAAGAGCCTGCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS-3UTR GCA 90 bp | TGCCCAGCTGTCTATGTATTTTTAGATATATCTGGGTACCCACAGACCCCAAGTCACAGCACCCGCAGCTaGTGCAGCCATCACCACCTC | + |
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Preference number: 4 (lower is better) Translates to: CPAVYVFLDISGYPQTPSHSTRS*CSHHHL Trigger: GAGGTGGTGATGGCTGCAGCAGCTGCGGGTGCTGTG...ACTTGGGGTCTGTGGGTACCCAGATATATCTAAAAATACATAGACAGCTGGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS-3UTR GCA 90 bp | CCCAGGGCTATGCAGGAAGATGCCTACTTCAGAGTGCAGAATAGAGAGATGGGAGGGTGCGCTGGTGTTTaGGGAAGTTGGAGGAGTTAT | + |
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Preference number: 4 (lower is better) Translates to: PRAMQEDAYFRVQNREMGGCAGV*GSWRSY Trigger: ATAACTCCTCCAACTTCCGCAAACACCAGCGCACCC...TCCCATCTCTCTATTCTGCACTCTGAAGTAGGCATCTTCCTGCATAGCCCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS-3UTR CCA 90 bp | TGCCCAGCTGTCTATGTATTTTTAGATATATCTGGGTACCCACAGACCCCAAGTCTCGATGAGGTCACCTaGGGGTGTGACAGGGCGACC | + |
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Preference number: 4 (lower is better) Translates to: CPAVYVFLDISGYPQTPSLDEVT*GCDRAT Trigger: GGTCGCCCTGTCACACCCCCAGGTGACCTCATCGAG...ACTTGGGGTCTGTGGGTACCCAGATATATCTAAAAATACATAGACAGCTGGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS-3UTR CCA 90 bp | GAAGCAGGCTCTTTGGAGGAGCTGGTGAGTTTTTATTATGCATCATCCGAGGATTCCCACTCCAGACCCTaGTCCATGGAAGTGGGTGCG | + |
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Preference number: 4 (lower is better) Translates to: EAGSLEELVSFYYASSEDSHSRP*SMEVGA Trigger: CGCACCCACTTCCATGGACCAGGGTCTGGAGTGGGA...ATCCTCGGATGATGCATAATAAAAACTCACCAGCTCCTCCAAAGAGCCTGCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS-3UTR TCA 90 bp | GTTTTGAGGGGAAGGTATCCCAGCATCCCTTTAGAGATGACTTGGTGGGCATCTAGGTGGCCATGCTCATaGAACAGCAGCTCTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: VLRGRYPSIPLEMTWWASRWPCS*NSSSET Trigger: AGTCTCAGAGCTGCTGTTTCATGAGCATGGCCACCT...AGATGCCCACCAAGTCATCTCTAAAGGGATGCTGGGATACCTTCCCCTCAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR CCA 90 bp | TGTCCTAGCTTCCAGCCTACTGGTCAACCTCCACATTCACTTTCACAGTCTCTCACAATGAAAAGATCCTaGCTCTGGGGGCTCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CPSFQPTGQPPHSLSQSLTMKRS*LWGLRD Trigger: GTCCCTGAGCCCCCAGAGCCAGGATCTTTTCATTGT...GAGAGACTGTGAAAGTGAATGTGGAGGTTGACCAGTAGGCTGGAAGCTAGGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR CCA 90 bp | TCTCAGTTGCTTGCAACTAAGTTTAGTGGGTTAAAGAGAGCCCACTATGGGGTACCTGGTCCATGGAAGTaGGTGCGCTGGTGTTTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SQLLATKFSGLKRAHYGVPGPWK*VRWCLR Trigger: CCGCAAACACCAGCGCACCCACTTCCATGGACCAGG...TACCCCATAGTGGGCTCTCTTTAACCCACTAAACTTAGTTGCAAGCAACTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR CCA 90 bp | AGTCTTTTAATAGGAACAGACTGGAAGTCCCCACTCTTACCCTGTACGCTAACTCCAGACCCTGGTCCATaGAAGTGGGTGCGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLIGTDWKSPLLPCTLTPDPGP*KWVRWC Trigger: ACACCAGCGCACCCACTTCCATGGACCAGGGTCTGG...AGTTAGCGTACAGGGTAAGAGTGGGGACTTCCAGTCTGTTCCTATTAAAAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR GCA 90 bp | AGTCTTTTAATAGGAACAGACTGGAAGTCCCCACTCTTACCCTGTACGCTAACTCTAGGATCCCCATCCTaGCCAAGCCCCTCCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLLIGTDWKSPLLPCTLTLGSPS*PSPSML Trigger: AAGCATGGAGGGGCTTGGGCAGGATGGGGATCCTAG...AGTTAGCGTACAGGGTAAGAGTGGGGACTTCCAGTCTGTTCCTATTAAAAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR GCA 90 bp | CTGGGATTACAGGCCTTTACCATGCCCAGCTGTCTATGTATTTTTAGATATATCAGCACCCGCAGCTGCTaGAGCCATCACCACCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LGLQAFTMPSCLCIFRYISTRSC*SHHHLR Trigger: TCGGAGGTGGTGATGGCTGCAGCAGCTGCGGGTGCT...GATATATCTAAAAATACATAGACAGCTGGGCATGGTAAAGGCCTGTAATCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR GCA 90 bp | TCTTGGGGATGCTGGATGACAAGGACTGAACTAGCAACACATCTCCATGAGAAAGTCCATGGAAGTGGGTaGGCTGGTGTTTGCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SWGCWMTRTELATHLHEKVHGSG*AGVCGS Trigger: ACTTCCGCAAACACCAGCGCACCCACTTCCATGGAC...TTTCTCATGGAGATGTGTTGCTAGTTCAGTCCTTGTCATCCAGCATCCCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| 3UTR CAA 72 bp | CATTTCATTGGACCAGAGGTGGTGGTACAGAAAGTCTaGCTTTCCAGCCTGGTCTGGTCTGGACCTCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: HFIGPEVVVQKV*LSSLVWSGPHD Trigger: ATCATGAGGTCCAGACCAGACCAGGCTGGAAAGCAAGACTTTCTGTACCACCACCTCTGGTCCAATGAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR TCA 90 bp | TACAGAAAGTCTTTTAATAGGAACAGACTGGAAGTCCCCACTCTTACCCTGTACCTGTGGCCACACACATaGCAACGGCTAGGATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YRKSFNRNRLEVPTLTLYLWPHT*QRLGSP Trigger: TGGGGATCCTAGCCGTTGTCATGTGTGTGGCCACAG...GTACAGGGTAAGAGTGGGGACTTCCAGTCTGTTCCTATTAAAAGACTTTCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR TCA 90 bp | TGTATTTTTAGATATATCTGGGTACCCACAGACCCCAAGTACCTCTTTCCTGAGGTGGTCTCGCATATCTaGGGAGCGTCGGAAGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CIFRYIWVPTDPKYLFPEVVSHI*GASEGL Trigger: AAGCCCTTCCGACGCTCCTCAGATATGCGAGACCAC...CTCAGGAAAGAGGTACTTGGGGTCTGTGGGTACCCAGATATATCTAAAAATACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR CCA 90 bp | AACTTCTTACAACACAACCAAATAGACATCTCCAAACAGCCCAAGCCTGGTCACAAAAGATCCTGGCTCTaGGGGCTCAGGGACCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: NFLQHNQIDISKQPKPGHKRSWL*GLRDRC Trigger: ACATCGGTCCCTGAGCCCCCAGAGCCAGGATCTTTT...GTGACCAGGCTTGGGCTGTTTGGAGATGTCTATTTGGTTGTGTTGTAAGAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| 3UTR CAA 72 bp | CTTTTTCATCTAACTCCAACTGCTCATGATTTCTCCTaGGCCTCTGCCTCTATTTGCCCACCCACCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFHLTPTAHDFS*ASASICPPTSP Trigger: AGGAGAGGTGGGTGGGCAAATAGAGGCAGAGGCCAAGGAGAAATCATGAGCAGTTGGAGTTAGATGAAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR TCA 90 bp | AACTTCTTACAACACAACCAAATAGACATCTCCAAACAGCCCAAGCCTGGTCACAGTTGGAGGAGTTATTaGAAGTGCGGTCACAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NFLQHNQIDISKQPKPGHSWRSY*KCGHRA Trigger: TGCTCTGTGACCGCACTTTCAATAACTCCTCCAACT...GTGACCAGGCTTGGGCTGTTTGGAGATGTCTATTTGGTTGTGTTGTAAGAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR CCA 90 bp | ACAAGGACTGAACTAGCAACACATCTCCATGAGAAAATTAGGGACCCTTCTGAGGAAGATGATCTCAGTTaGCCTCTAGACTCTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: TRTELATHLHEKIRDPSEEDDLS*PLDSPT Trigger: AGTGGGAGAGTCTAGAGGCCAACTGAGATCATCTTC...CTCAGAAGGGTCCCTAATTTTCTCATGGAGATGTGTTGCTAGTTCAGTCCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR CCA 90 bp | TGTATTTTTAGATATATCTGGGTACCCACAGACCCCAAGTACCTCTTTCCTGAGGTGACTTTTACCACCTaGATCTCGATGAGGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: CIFRYIWVPTDPKYLFPEVTFTT*ISMRSP Trigger: AGGTGACCTCATCGAGATCCAGGTGGTAAAAGTCAC...CTCAGGAAAGAGGTACTTGGGGTCTGTGGGTACCCAGATATATCTAAAAATACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS TCA 90 bp | TGGGCACGCAGGCTAGCAGGACCTGGACAGCTGTGGCCACACACATaGCAACGGCTAGGATCCCCATCCTGCCCAAGCCCCTCCATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: WARRLAGPGQLWPHT*QRLGSPSCPSPSML Trigger: AAGCATGGAGGGGCTTGGGCAGGATGGGGATCCTAGCCGTTGTCATGTGTGTGGCCACAGCTGTCCAGGTCCTGCTAGCCTGCGTGCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS CCA 90 bp | GCACCCGCTCGTGGTCTCGCATATCTGAGGAGCGTCGGAAGGGCTTaGCACAAAACCTGCAGGCGAAAGGCTTGCCTACCACAGCACCCG | + |
|
Preference number: 5 (lower is better) Translates to: APARGLAYLRSVGRA*HKTCRRKACLPQHP Trigger: CGGGTGCTGTGGTAGGCAAGCCTTTCGCCTGCAGGTTTTGTGCCAAGCCCTTCCGACGCTCCTCAGATATGCGAGACCACGAGCGGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS GCA 90 bp | GGTCTCGCATATCTGAGGAGCGTCGGAAGGGCTTGGCACAAAACCTaGAGGCGAAAGGCTTGCCTACCACAGCACCCGCAGCTGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLAYLRSVGRAWHKT*RRKACLPQHPQLLQ Trigger: CTGCAGCAGCTGCGGGTGCTGTGGTAGGCAAGCCTTTCGCCTGCAGGTTTTGTGCCAAGCCCTTCCGACGCTCCTCAGATATGCGAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS CCA 90 bp | TCGGTGTTGGTGCCGGAGCAGAGGTGCCAAGGCCTTAAAAGCCCGTaGGCAGAGGGAACAGCGGTAAGGCCGTTCTCCTGTGTGCAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SVLVPEQRCQGLKSP*AEGTAVRPFSCVQA Trigger: AGCTTGCACACAGGAGAACGGCCTTACCGCTGTTCCCTCTGCCCACGGGCTTTTAAGGCCTTGGCACCTCTGCTCCGGCACCAACACCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS TCA 90 bp | CCATCCTGCCCAAGCCCCTCCATGCTTGCCAGGTGGCCATGCTCATaGAACAGCAGCTCTGAGACTAGACGGAAGGCAGCAGGACACAGG | + |
|
Preference number: 5 (lower is better) Translates to: PSCPSPSMLARWPCS*NSSSETRRKAAGHR Trigger: CCTGTGTCCTGCTGCCTTCCGTCTAGTCTCAGAGCTGCTGTTTCATGAGCATGGCCACCTGGCAAGCATGGAGGGGCTTGGGCAGGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS CCA 90 bp | TGTGGTATCTGTGACTTTTACCACCTGGATCTCGATGAGGTCACCTaGGGGTGTGACAGGGCGACCATCAGGCACCAGGACCAGGTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CGICDFYHLDLDEVT*GCDRATIRHQDQVR Trigger: CCGGACCTGGTCCTGGTGCCTGATGGTCGCCCTGTCACACCCCCAGGTGACCTCATCGAGATCCAGGTGGTAAAAGTCACAGATACCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS CCA 90 bp | TTCTCCTGTGTGCAAGCTGTAATGGGCACGCAGGCTAGCAGGACCTaGACAGCTGTGGCCACACACATGACAACGGCTAGGATCCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: FSCVQAVMGTQASRT*TAVATHMTTARIPI Trigger: GATGGGGATCCTAGCCGTTGTCATGTGTGTGGCCACAGCTGTCCAGGTCCTGCTAGCCTGCGTGCCCATTACAGCTTGCACACAGGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS TCA 90 bp | AGCAGCTCTGAGACTAGACGGAAGGCAGCAGGACACAGGGCACAATaGAAAGATCCTGGCTCTGGGGGCTCAGGGACCGATGTGGTATCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSETRRKAAGHRAQ*KDPGSGGSGTDVVS Trigger: AGATACCACATCGGTCCCTGAGCCCCCAGAGCCAGGATCTTTTCATTGTGCCCTGTGTCCTGCTGCCTTCCGTCTAGTCTCAGAGCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR CAA 90 bp | CCCAGGGCTATGCAGGAAGATGCCTACTTCAGAGTGCAGAATAGAGAGATGGGACTGCAGGCGAAAGGCTaGCCTACCACAGCACCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PRAMQEDAYFRVQNREMGLQAKG*PTTAPA Trigger: TGCGGGTGCTGTGGTAGGCAAGCCTTTCGCCTGCAG...TCCCATCTCTCTATTCTGCACTCTGAAGTAGGCATCTTCCTGCATAGCCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS CCA 90 bp | CTAGACTCTCCCACTCCAGACCCTGGTCCATGGAAGTGGGTGCGCTaGTGTTTGCGGAAGTTGGAGGAGTTATTGAAAGTGCGGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: LDSPTPDPGPWKWVR*CLRKLEELLKVRSQ Trigger: CTGTGACCGCACTTTCAATAACTCCTCCAACTTCCGCAAACACCAGCGCACCCACTTCCATGGACCAGGGTCTGGAGTGGGAGAGTCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS CCA 90 bp | GATCTCAGTTGGCCTCTAGACTCTCCCACTCCAGACCCTGGTCCATaGAAGTGGGTGCGCTGGTGTTTGCGGAAGTTGGAGGAGTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: DLSWPLDSPTPDPGP*KWVRWCLRKLEELL Trigger: CAATAACTCCTCCAACTTCCGCAAACACCAGCGCACCCACTTCCATGGACCAGGGTCTGGAGTGGGAGAGTCTAGAGGCCAACTGAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR CAA 90 bp | CCCAGGGCTATGCAGGAAGATGCCTACTTCAGAGTGCAGAATAGAGAGATGGGACAAGCCCCTCCATGCTaGCCAGGTGGCCATGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PRAMQEDAYFRVQNREMGQAPPC*PGGHAH Trigger: ATGAGCATGGCCACCTGGCAAGCATGGAGGGGCTTG...TCCCATCTCTCTATTCTGCACTCTGAAGTAGGCATCTTCCTGCATAGCCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS CCA 90 bp | AGTTGGCCTCTAGACTCTCCCACTCCAGACCCTGGTCCATGGAAGTaGGTGCGCTGGTGTTTGCGGAAGTTGGAGGAGTTATTGAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SWPLDSPTPDPGPWK*VRWCLRKLEELLKV Trigger: CACTTTCAATAACTCCTCCAACTTCCGCAAACACCAGCGCACCCACTTCCATGGACCAGGGTCTGGAGTGGGAGAGTCTAGAGGCCAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR CAA 90 bp | GATTTCTCCTTGGCCTCTGCCTCTATTTGCCCACCCACCTCTCCTACGATATGTGGGCCACCCTTGAGTTaGGCTGTCCGGTTGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DFSLASASICPPTSPTICGPPLS*AVRLLL Trigger: CAACAACAACCGGACAGCCAAACTCAAGGGTGGCCC...ACATATCGTAGGAGAGGTGGGTGGGCAAATAGAGGCAGAGGCCAAGGAGAAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR CAA 90 bp | GAAGCAGGCTCTTTGGAGGAGCTGGTGAGTTTTTATTATGCATCATCCGAGGATTACCCCATGTCGGTGTaGGTGCCGGAGCAGAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: EAGSLEELVSFYYASSEDYPMSV*VPEQRC Trigger: GCACCTCTGCTCCGGCACCAACACCGACATGGGGTA...ATCCTCGGATGATGCATAATAAAAACTCACCAGCTCCTCCAAAGAGCCTGCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR CAA 90 bp | GACCAGTGCAATCCAGTTGAAGTAGGCAAAACATTTCATTGGACCAGAGGTGGTTCTCCTGGGCCACCCTaGAGTTTGGCTGTCCGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DQCNPVEVGKTFHWTRGGSPGPP*SLAVRL Trigger: CAACCGGACAGCCAAACTCAAGGGTGGCCCAGGAGA...ACCACCTCTGGTCCAATGAAATGTTTTGCCTACTTCAACTGGATTGCACTGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR CAA 90 bp | TCTTGGGGATGCTGGATGACAAGGACTGAACTAGCAACACATCTCCATGAGAAATGGGTGCGCTGGTGTTaGCGGAAGTTGGAGGAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SWGCWMTRTELATHLHEKWVRWC*RKLEEL Trigger: TAACTCCTCCAACTTCCGCAAACACCAGCGCACCCA...TTTCTCATGGAGATGTGTTGCTAGTTCAGTCCTTGTCATCCAGCATCCCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR CAA 90 bp | TCTTGGGGATGCTGGATGACAAGGACTGAACTAGCAACACATCTCCATGAGAAAGACTGCGTGAAGCCTTaGCCACAGATACTACAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SWGCWMTRTELATHLHEKDCVKP*PQILQW Trigger: CCACTGTAGTATCTGTGGCAAAGGCTTCACGCAGTC...TTTCTCATGGAGATGTGTTGCTAGTTCAGTCCTTGTCATCCAGCATCCCCAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR CAA 90 bp | ACCTCCACATTCACTTTCACAGTCTCTCTACACCCTTCTTCCATAGTGTTCTCTAGTTTGGCTGTCCGGTaGTTGTTGTGGGTAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TSTFTFTVSLHPSSIVFSSLAVR*LLWVEA Trigger: GGCTTCTACCCACAACAACAACCGGACAGCCAAACT...AGAGAACACTATGGAAGAAGGGTGTAGAGAGACTGTGAAAGTGAATGTGGAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR CAA 90 bp | GTTTTGAGGGGAAGGTATCCCAGCATCCCTTTAGAGATGACTTGGTGGGCATCTTGGTGTTTGCGGAAGTaGGAGGAGTTATTGAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VLRGRYPSIPLEMTWWASWCLRK*EELLKV Trigger: CACTTTCAATAACTCCTCCAACTTCCGCAAACACCA...AGATGCCCACCAAGTCATCTCTAAAGGGATGCTGGGATACCTTCCCCTCAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR CAA 90 bp | GACCAGTGCAATCCAGTTGAAGTAGGCAAAACATTTCATTGGACCAGAGGTGGTAAGTTGGAGGAGTTATaGAAAGTGCGGTCACAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: DQCNPVEVGKTFHWTRGGKLEEL*KVRSQS Trigger: GCTCTGTGACCGCACTTTCAATAACTCCTCCAACTT...ACCACCTCTGGTCCAATGAAATGTTTTGCCTACTTCAACTGGATTGCACTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS-3UTR CAA 90 bp | CTGGGATTACAGGCCTTTACCATGCCCAGCTGTCTATGTATTTTTAGATATATCTTGGCTGTCCGGTTGTaGTTGTGGGTAGAAGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LGLQAFTMPSCLCIFRYILAVRL*LWVEAF Trigger: AAAGGCTTCTACCCACAACAACAACCGGACAGCCAA...GATATATCTAAAAATACATAGACAGCTGGGCATGGTAAAGGCCTGTAATCCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS GCA 72 bp | GGCGAAAGGCTTGCCTACCACAGCACCCGCAGCTGCTaGAGCCATCACCACCTCCGACCTCTCCTGGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GERLAYHSTRSC*SHHHLRPLLGH Trigger: GTGGCCCAGGAGAGGTCGGAGGTGGTGATGGCTGCAGCAGCTGCGGGTGCTGTGGTAGGCAAGCCTTTCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS GCA 72 bp | GCAGGCGAAAGGCTTGCCTACCACAGCACCCGCAGCTaGTGCAGCCATCACCACCTCCGACCTCTCCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AGERLAYHSTRS*CSHHHLRPLLG Trigger: GCCCAGGAGAGGTCGGAGGTGGTGATGGCTGCAGCAGCTGCGGGTGCTGTGGTAGGCAAGCCTTTCGCCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS TCA 72 bp | AGGCTAGCAGGACCTGGACAGCTGTGGCCACACACATaGCAACGGCTAGGATCCCCATCCTGCCCAAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RLAGPGQLWPHT*QRLGSPSCPSP Trigger: GGGGCTTGGGCAGGATGGGGATCCTAGCCGTTGTCATGTGTGTGGCCACAGCTGTCCAGGTCCTGCTAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS CCA 72 bp | GTGCCGGAGCAGAGGTGCCAAGGCCTTAAAAGCCCGTaGGCAGAGGGAACAGCGGTAAGGCCGTTCTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VPEQRCQGLKSP*AEGTAVRPFSC Trigger: ACAGGAGAACGGCCTTACCGCTGTTCCCTCTGCCCACGGGCTTTTAAGGCCTTGGCACCTCTGCTCCGGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS CAA 90 bp | TGCACCCGCTCGTGGTCTCGCATATCTGAGGAGCGTCGGAAGGGCTaGGCACAAAACCTGCAGGCGAAAGGCTTGCCTACCACAGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: CTRSWSRISEERRKG*AQNLQAKGLPTTAP Trigger: GGGTGCTGTGGTAGGCAAGCCTTTCGCCTGCAGGTTTTGTGCCAAGCCCTTCCGACGCTCCTCAGATATGCGAGACCACGAGCGGGTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS CCA 72 bp | GCAGCTGCTGCAGCCATCACCACCTCCGACCTCTCCTaGGCCACCCTTGAGTTTGGCTGTCCGGTTGTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: AAAAAITTSDLS*ATLEFGCPVVV Trigger: AACAACAACCGGACAGCCAAACTCAAGGGTGGCCCAGGAGAGGTCGGAGGTGGTGATGGCTGCAGCAGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS GCA 72 bp | TATCTGAGGAGCGTCGGAAGGGCTTGGCACAAAACCTaGAGGCGAAAGGCTTGCCTACCACAGCACCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: YLRSVGRAWHKT*RRKACLPQHPQ Trigger: CTGCGGGTGCTGTGGTAGGCAAGCCTTTCGCCTGCAGGTTTTGTGCCAAGCCCTTCCGACGCTCCTCAGATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS CCA 72 bp | GTGCAAGCTGTAATGGGCACGCAGGCTAGCAGGACCTaGACAGCTGTGGCCACACACATGACAACGGCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: VQAVMGTQASRT*TAVATHMTTAR Trigger: CCTAGCCGTTGTCATGTGTGTGGCCACAGCTGTCCAGGTCCTGCTAGCCTGCGTGCCCATTACAGCTTGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS CCA 72 bp | TGGCCTCTAGACTCTCCCACTCCAGACCCTGGTCCATaGAAGTGGGTGCGCTGGTGTTTGCGGAAGTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: WPLDSPTPDPGP*KWVRWCLRKLE Trigger: CTCCAACTTCCGCAAACACCAGCGCACCCACTTCCATGGACCAGGGTCTGGAGTGGGAGAGTCTAGAGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS CAA 90 bp | CTGCAGCCATCACCACCTCCGACCTCTCCTGGGCCACCCTTGAGTTaGGCTGTCCGGTTGTTGTTGTGGGTAGAAGCCTTTCAGAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LQPSPPPTSPGPPLS*AVRLLLWVEAFQRC Trigger: GCACCTCTGAAAGGCTTCTACCCACAACAACAACCGGACAGCCAAACTCAAGGGTGGCCCAGGAGAGGTCGGAGGTGGTGATGGCTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
||
| CDS TCA 72 bp | GAGACTAGACGGAAGGCAGCAGGACACAGGGCACAATaGAAAGATCCTGGCTCTGGGGGCTCAGGGACCGAT | + |
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Preference number: 6 (lower is better) Translates to: ETRRKAAGHRAQ*KDPGSGGSGTD Trigger: ATCGGTCCCTGAGCCCCCAGAGCCAGGATCTTTTCATTGTGCCCTGTGTCCTGCTGCCTTCCGTCTAGTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS TCA 72 bp | CCAAGCCCCTCCATGCTTGCCAGGTGGCCATGCTCATaGAACAGCAGCTCTGAGACTAGACGGAAGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PSPSMLARWPCS*NSSSETRRKAA Trigger: TGCTGCCTTCCGTCTAGTCTCAGAGCTGCTGTTTCATGAGCATGGCCACCTGGCAAGCATGGAGGGGCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS TCA 72 bp | GGATGCGGGCATGACCACTCAGCACAGAGGACTGCGTaGAGCCTTTGCCACAGATACTACAGTGGTAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: GCGHDHSAQRTA*SLCHRYYSGRA Trigger: GGCCCTACCACTGTAGTATCTGTGGCAAAGGCTTCACGCAGTCCTCTGTGCTGAGTGGTCATGCCCGCATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS CCA 72 bp | TGTGACTTTTACCACCTGGATCTCGATGAGGTCACCTaGGGGTGTGACAGGGCGACCATCAGGCACCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: CDFYHLDLDEVT*GCDRATIRHQD Trigger: GTCCTGGTGCCTGATGGTCGCCCTGTCACACCCCCAGGTGACCTCATCGAGATCCAGGTGGTAAAAGTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS CCA 72 bp | CGTGGTCTCGCATATCTGAGGAGCGTCGGAAGGGCTTaGCACAAAACCTGCAGGCGAAAGGCTTGCCTACCA | + |
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Preference number: 6 (lower is better) Translates to: RGLAYLRSVGRA*HKTCRRKACLP Trigger: TGGTAGGCAAGCCTTTCGCCTGCAGGTTTTGTGCCAAGCCCTTCCGACGCTCCTCAGATATGCGAGACCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS CAA 72 bp | ACCTCTCCTGGGCCACCCTTGAGTTTGGCTGTCCGGTaGTTGTTGTGGGTAGAAGCCTTTCAGAGGTGCCGG | + |
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Preference number: 6 (lower is better) Translates to: TSPGPPLSLAVR*LLWVEAFQRCR Trigger: CCGGCACCTCTGAAAGGCTTCTACCCACAACAACAACCGGACAGCCAAACTCAAGGGTGGCCCAGGAGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS CAA 72 bp | CAGCCATCACCACCTCCGACCTCTCCTGGGCCACCCTaGAGTTTGGCTGTCCGGTTGTTGTTGTGGGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: QPSPPPTSPGPP*SLAVRLLLWVE Trigger: TTCTACCCACAACAACAACCGGACAGCCAAACTCAAGGGTGGCCCAGGAGAGGTCGGAGGTGGTGATGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS CAA 72 bp | TCGTGGTCTCGCATATCTGAGGAGCGTCGGAAGGGCTaGGCACAAAACCTGCAGGCGAAAGGCTTGCCTACC | + |
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Preference number: 6 (lower is better) Translates to: SWSRISEERRKG*AQNLQAKGLPT Trigger: GGTAGGCAAGCCTTTCGCCTGCAGGTTTTGTGCCAAGCCCTTCCGACGCTCCTCAGATATGCGAGACCACGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS CCA 72 bp | GAAGGCAGCAGGACACAGGGCACAATGAAAAGATCCTaGCTCTGGGGGCTCAGGGACCGATGTGGTATCTGT | + |
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Preference number: 6 (lower is better) Translates to: EGSRTQGTMKRS*LWGLRDRCGIC Trigger: ACAGATACCACATCGGTCCCTGAGCCCCCAGAGCCAGGATCTTTTCATTGTGCCCTGTGTCCTGCTGCCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS CAA 72 bp | TCACCACCTCCGACCTCTCCTGGGCCACCCTTGAGTTaGGCTGTCCGGTTGTTGTTGTGGGTAGAAGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: SPPPTSPGPPLS*AVRLLLWVEAF Trigger: AAAGGCTTCTACCCACAACAACAACCGGACAGCCAAACTCAAGGGTGGCCCAGGAGAGGTCGGAGGTGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS CAA 90 bp | CCAGACCCTGGTCCATGGAAGTGGGTGCGCTGGTGTTTGCGGAAGTaGGAGGAGTTATTGAAAGTGCGGTCACAGAGCATGCATCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: PDPGPWKWVRWCLRK*EELLKVRSQSMHRK Trigger: CTTCCGATGCATGCTCTGTGACCGCACTTTCAATAACTCCTCCAACTTCCGCAAACACCAGCGCACCCACTTCCATGGACCAGGGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS CAA 90 bp | TCTCCCACTCCAGACCCTGGTCCATGGAAGTGGGTGCGCTGGTGTTaGCGGAAGTTGGAGGAGTTATTGAAAGTGCGGTCACAGAGCATG | + |
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Preference number: 6 (lower is better) Translates to: SPTPDPGPWKWVRWC*RKLEELLKVRSQSM Trigger: CATGCTCTGTGACCGCACTTTCAATAACTCCTCCAACTTCCGCAAACACCAGCGCACCCACTTCCATGGACCAGGGTCTGGAGTGGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS CCA 72 bp | TCAGGGACCGATGTGGTATCTGTGACTTTTACCACCTaGATCTCGATGAGGTCACCTGGGGGTGTGACAGGG | + |
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Preference number: 6 (lower is better) Translates to: SGTDVVSVTFTT*ISMRSPGGVTG Trigger: CCCTGTCACACCCCCAGGTGACCTCATCGAGATCCAGGTGGTAAAAGTCACAGATACCACATCGGTCCCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS CCA 72 bp | CCCACTCCAGACCCTGGTCCATGGAAGTGGGTGCGCTaGTGTTTGCGGAAGTTGGAGGAGTTATTGAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: PTPDPGPWKWVR*CLRKLEELLKV Trigger: CACTTTCAATAACTCCTCCAACTTCCGCAAACACCAGCGCACCCACTTCCATGGACCAGGGTCTGGAGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS CAA 72 bp | TGGGTGCGCTGGTGTTTGCGGAAGTTGGAGGAGTTATaGAAAGTGCGGTCACAGAGCATGCATCGGAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: WVRWCLRKLEEL*KVRSQSMHRKG Trigger: CCCCTTCCGATGCATGCTCTGTGACCGCACTTTCAATAACTCCTCCAACTTCCGCAAACACCAGCGCACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS CAA 72 bp | CCAGACCCTGGTCCATGGAAGTGGGTGCGCTGGTGTTaGCGGAAGTTGGAGGAGTTATTGAAAGTGCGGTCA | + |
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Preference number: 6 (lower is better) Translates to: PDPGPWKWVRWC*RKLEELLKVRS Trigger: TGACCGCACTTTCAATAACTCCTCCAACTTCCGCAAACACCAGCGCACCCACTTCCATGGACCAGGGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS CCA 72 bp | AGCAGGACACAGGGCACAATGAAAAGATCCTGGCTCTaGGGGCTCAGGGACCGATGTGGTATCTGTGACTTT | + |
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Preference number: 6 (lower is better) Translates to: SRTQGTMKRSWL*GLRDRCGICDF Trigger: AAAGTCACAGATACCACATCGGTCCCTGAGCCCCCAGAGCCAGGATCTTTTCATTGTGCCCTGTGTCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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| CDS CAA 72 bp | GGTCCATGGAAGTGGGTGCGCTGGTGTTTGCGGAAGTaGGAGGAGTTATTGAAAGTGCGGTCACAGAGCATG | + |
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Preference number: 6 (lower is better) Translates to: GPWKWVRWCLRK*EELLKVRSQSM Trigger: CATGCTCTGTGACCGCACTTTCAATAACTCCTCCAACTTCCGCAAACACCAGCGCACCCACTTCCATGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062428.5 |
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