Pregenerated sensors for ZFP781 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096718Ensembl transcript IDs: ENSMUST00000076281.6, ENSMUST00000219144.2
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACCCACATAGTCAAGTTTTGCAGCAAGAATCTTCAACTGGTGAGTaGACTCACTGGTGCTTAAATTTCAGAACTATTTATGTATGTGTT | + |
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Preference number: 1 (lower is better) Translates to: DPHSQVLQQESSTGE*THWCLNFRTIYVCV Trigger: AACACATACATAAATAGTTCTGAAATTTAAGCACCAGTGAGTTCACTCACCAGTTGAAGATTCTTGCTGCAAAACTTGACTATGTGGGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR CCA 90 bp | GAGAAGACTATGACATGCAGAGGCACTATGACATTGACTTTTCTCTaGGATGTGTTTCAACATTATACTGATGATCAAACTTTTATTACA | + |
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Preference number: 1 (lower is better) Translates to: EKTMTCRGTMTLTFL*DVFQHYTDDQTFIT Trigger: TGTAATAAAAGTTTGATCATCAGTATAATGTTGAAACACATCCCAGAGAAAAGTCAATGTCATAGTGCCTCTGCATGTCATAGTCTTCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCAACCTCCTTTACCCACAGTGATAATTCTCGGCCGTTCATTTGTGTTTCTTAAGACTAGTGTGATATaGAAAGGCTTTACCACAGTG | + |
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Preference number: 2 (lower is better) Translates to: QQPPLPTVIILGRSFVFLKTSVI*KGFTTV Trigger: CACTGTGGTAAAGCCTTTGCATATCACACTAGTCTT...AAGAAACACAAATGAACGGCCGAGAATTATCACTGTGGGTAAAGGAGGTTGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR GCA 90 bp | CACATAGTCAAGTTTTGCAGCAAGAATCTTCAACTGGTGAGTGAACTCACTGGTGTTGCTGTGTGGATATaGATATGTCATAGCACGTGT | + |
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Preference number: 2 (lower is better) Translates to: HIVKFCSKNLQLVSELTGVAVWI*ICHSTC Trigger: ACACGTGCTATGACATATGCATATCCACACAGCAAC...ACCAGTGAGTTCACTCACCAGTTGAAGATTCTTGCTGCAAAACTTGACTATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR CCA 90 bp | AATCTTTGCATACCAGATGTCCAAGGAAGCCAGAAGAATGTATCTGAACTTCTGCAGAAGATGGCTCAGTaGGAAATATGTGCTTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: NLCIPDVQGSQKNVSELLQKMAQ*EICAWC Trigger: ACACCAAGCACATATTTCCCACTGAGCCATCTTCTG...CAGAAGTTCAGATACATTCTTCTGGCTTCCTTGGACATCTGGTATGCAAAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCAACATTCCAGACCACAAATATGCAACTATAATGCAGAAAATGAAGAGGCCAGAATCTTCAACTGGTaGGTGAACTCACTGGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: CQHSRPQICNYNAENEEARIFNW*VNSLVL Trigger: AAGCACCAGTGAGTTCACTCACCAGTTGAAGATTCT...GGCCTCTTCATTTTCTGCATTATAGTTGCATATTTGTGGTCTGGAATGTTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR TCA 90 bp | AATCTTTGCATACCAGATGTCCAAGGAAGCCAGAAGAATGTATCTGAACTTCTGACCTTTCCATCTAACTaGGGTGTTTTTACAATGGCC | + |
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Preference number: 2 (lower is better) Translates to: NLCIPDVQGSQKNVSELLTFPSN*GVFTMA Trigger: GGCCATTGTAAAAACACCTCAGTTAGATGGAAAGGT...CAGAAGTTCAGATACATTCTTCTGGCTTCCTTGGACATCTGGTATGCAAAGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCAACATTCCAGACCACAAATATGCAACTATAATGCAGAAAATGAAGAGGCCAAGACTAGCATGGCTTaGAAAGGCTTTGCTGCATTG | + |
|
Preference number: 2 (lower is better) Translates to: CQHSRPQICNYNAENEEAKTSMA*KGFAAL Trigger: CAATGCAGCAAAGCCTTTGCAAGCCATGCTAGTCTT...GGCCTCTTCATTTTCTGCATTATAGTTGCATATTTGTGGTCTGGAATGTTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR GCA 90 bp | CACATAGTCAAGTTTTGCAGCAAGAATCTTCAACTGGTGAGTGAACTCACTGGTAATATGTGCTTGGTGTaGAAGGCTTTAGTGCATCTA | + |
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Preference number: 2 (lower is better) Translates to: HIVKFCSKNLQLVSELTGNMCLV*KALVHL Trigger: TAGATGCACTAAAGCCTTGCACACCAAGCACATATT...ACCAGTGAGTTCACTCACCAGTTGAAGATTCTTGCTGCAAAACTTGACTATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR CCA 90 bp | CACATAGTCAAGTTTTGCAGCAAGAATCTTCAACTGGTGAGTGAACTCACTGGTGTATGTGTTGCTGTGTaGATATGCATATGTCATAGC | + |
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Preference number: 2 (lower is better) Translates to: HIVKFCSKNLQLVSELTGVCVAV*ICICHS Trigger: GCTATGACATATGCATATCCACACAGCAACACATAC...ACCAGTGAGTTCACTCACCAGTTGAAGATTCTTGCTGCAAAACTTGACTATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR CCA 90 bp | AATCTTTGCATACCAGATGTCCAAGGAAGCCAGAAGAATGTATCTGAACTTCTGGCCCCATTATTCCCTTaGTCTTCTATCACTTATAGG | + |
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Preference number: 2 (lower is better) Translates to: NLCIPDVQGSQKNVSELLAPLFP*SSITYR Trigger: CCTATAAGTGATAGAAGACCAAGGGAATAATGGGGC...CAGAAGTTCAGATACATTCTTCTGGCTTCCTTGGACATCTGGTATGCAAAGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCAACATTCCAGACCACAAATATGCAACTATAATGCAGAAAATGAAGAGGCCTCTTCAACTGGTGAGTaGACTCACTGGTGCTTAAAT | + |
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Preference number: 2 (lower is better) Translates to: CQHSRPQICNYNAENEEASSTGE*THWCLN Trigger: ATTTAAGCACCAGTGAGTTCACTCACCAGTTGAAGA...GGCCTCTTCATTTTCTGCATTATAGTTGCATATTTGTGGTCTGGAATGTTGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR GCA 90 bp | AATCTTTGCATACCAGATGTCCAAGGAAGCCAGAAGAATGTATCTGAACTTCTGAAGATAACTTTGACTTaGAAAGGCTTTACCACGCTG | + |
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Preference number: 2 (lower is better) Translates to: NLCIPDVQGSQKNVSELLKITLT*KGFTTL Trigger: CAGCGTGGTAAAGCCTTTGCAAGTCAAAGTTATCTT...CAGAAGTTCAGATACATTCTTCTGGCTTCCTTGGACATCTGGTATGCAAAGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGTAACTGCTAGGAAGAGAAGTACTACTATGTCAACATTCCAGACCACAAATATAAGCACCAGAAGATaGCTCAGTGGGAAATATGTG | + |
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Preference number: 2 (lower is better) Translates to: VVTARKRSTTMSTFQTTNISTRR*LSGKYV Trigger: CACATATTTCCCACTGAGCCATCTTCTGGTGCTTAT...ATTTGTGGTCTGGAATGTTGACATAGTAGTACTTCTCTTCCTAGCAGTTACAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR GCA 90 bp | AATCTTTGCATACCAGATGTCCAAGGAAGCCAGAAGAATGTATCTGAACTTCTGAAGACTACTGCTATATaGAAAGGCTTTACCACATTG | + |
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Preference number: 2 (lower is better) Translates to: NLCIPDVQGSQKNVSELLKTTAI*KGFTTL Trigger: CAATGTGGTAAAGCCTTTGCATATAGCAGTAGTCTT...CAGAAGTTCAGATACATTCTTCTGGCTTCCTTGGACATCTGGTATGCAAAGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR GCA 90 bp | GTTGTAACTGCTAGGAAGAGAAGTACTACTATGTCAACATTCCAGACCACAAATGTATTTGAAGATTACTaGGACGTGCAAAGACCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: VVTARKRSTTMSTFQTTNVFEDY*DVQRPY Trigger: GTAAGGTCTTTGCACGTCGCAGTAATCTTCAAATAC...ATTTGTGGTCTGGAATGTTGACATAGTAGTACTTCTCTTCCTAGCAGTTACAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR CCA 90 bp | TCCAGACCACAAATATGCAACTATAATGCAGAAAATGAAGAGGCCCCATTATTCTTGTTCTTGATGTCTTaGGATTTTTGTTGGTGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: SRPQICNYNAENEEAPLFLFLMS*DFCWWW Trigger: CCACCACCAACAAAAATCCCAAGACATCAAGAACAA...GAATAATGGGGCCTCTTCATTTTCTGCATTATAGTTGCATATTTGTGGTCTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAGACCACAAATATGCAACTATAATGCAGAAAATGAAGAGGCCCCATTATTCCTTCTCTCATGTATTTaGAGACTACTGCTATATGCA | + |
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Preference number: 2 (lower is better) Translates to: SRPQICNYNAENEEAPLFLLSCI*RLLLYA Trigger: TGCATATAGCAGTAGTCTTCAAATACATGAGAGAAG...GAATAATGGGGCCTCTTCATTTTCTGCATTATAGTTGCATATTTGTGGTCTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCAACATTCCAGACCACAAATATGCAACTATAATGCAGAAAATGAAGAGGCCATTCTTTCATGTATTTaGAGATTACTGCGACGTGCA | + |
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Preference number: 2 (lower is better) Translates to: CQHSRPQICNYNAENEEAILSCI*RLLRRA Trigger: TGCACGTCGCAGTAATCTTCAAATACATGAAAGAAT...GGCCTCTTCATTTTCTGCATTATAGTTGCATATTTGTGGTCTGGAATGTTGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCAACATTCCAGACCACAAATATGCAACTATAATGCAGAAAATGAAGAGGCCTTACAAAGACTAGTGTaGTATGCAAAGGCTTTACCA | + |
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Preference number: 2 (lower is better) Translates to: CQHSRPQICNYNAENEEALQRLV*YAKALP Trigger: TGGTAAAGCCTTTGCATATCACACTAGTCTTTGTAA...GGCCTCTTCATTTTCTGCATTATAGTTGCATATTTGTGGTCTGGAATGTTGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCAACATTCCAGACCACAAATATGCAACTATAATGCAGAAAATGAAGAGGCCGTGAGTACATTCTTATaGTTCCACTCTAGTATGAAC | + |
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Preference number: 2 (lower is better) Translates to: CQHSRPQICNYNAENEEAVSTFL*FHSSMN Trigger: GTTCATACTAGAGTGGAACCATAAGAATGTACTCAC...GGCCTCTTCATTTTCTGCATTATAGTTGCATATTTGTGGTCTGGAATGTTGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR CAA 90 bp | TTCATGATTTTGGAGAAGACTATGACATGCAGAGGCACTATGACATaGACTTTTCTCTGGGATGTGTTTCAACATTATACTGATGATCAA | + |
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Preference number: 2 (lower is better) Translates to: FMILEKTMTCRGTMT*TFLWDVFQHYTDDQ Trigger: TTGATCATCAGTATAATGTTGAAACACATCCCAGAGAAAAGTCAATGTCATAGTGCCTCTGCATGTCATAGTCTTCTCCAAAATCATGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCAACATTCCAGACCACAAATATGCAACTATAATGCAGAAAATGAAGAGGCCAAGATAACTTTGAAGTaGAAAGGCTTTACCACATTG | + |
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Preference number: 2 (lower is better) Translates to: CQHSRPQICNYNAENEEAKITLK*KGFTTL Trigger: CAATGTGGTAAAGCCTTTGCACTTCAAAGTTATCTT...GGCCTCTTCATTTTCTGCATTATAGTTGCATATTTGTGGTCTGGAATGTTGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR GCA 90 bp | TGTCAACATTCCAGACCACAAATATGCAACTATAATGCAGAAAATGAAGAGGCCGTATTTGAAGACTACTaGTATATGCAAAGGCTTTAC | + |
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Preference number: 2 (lower is better) Translates to: CQHSRPQICNYNAENEEAVFEDY*YMQRLY Trigger: GTAAAGCCTTTGCATATAGCAGTAGTCTTCAAATAC...GGCCTCTTCATTTTCTGCATTATAGTTGCATATTTGTGGTCTGGAATGTTGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCAACATTCCAGACCACAAATATGCAACTATAATGCAGAAAATGAAGAGGCCCTATCCTATTATGAATaGACTCTGCTATTGCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: CQHSRPQICNYNAENEEALSYYE*TLLLLF Trigger: GAAAAGCAATAGCAGAGTCCATTCATAATAGGATAG...GGCCTCTTCATTTTCTGCATTATAGTTGCATATTTGTGGTCTGGAATGTTGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR CAA 90 bp | CACATAGTCAAGTTTTGCAGCAAGAATCTTCAACTGGTGAGTGAACTCACTGGTGTGGGAAATATGTGCTaGGTGTGCAAGGCTTTAGTG | + |
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Preference number: 3 (lower is better) Translates to: HIVKFCSKNLQLVSELTGVGNMC*VCKALV Trigger: CACTAAAGCCTTGCACACCAAGCACATATTTCCCAC...ACCAGTGAGTTCACTCACCAGTTGAAGATTCTTGCTGCAAAACTTGACTATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR CAA 90 bp | GTTGTAACTGCTAGGAAGAGAAGTACTACTATGTCAACATTCCAGACCACAAATGGAGATAACTTCGACTaGCAAAGGCTTTACCACACT | + |
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Preference number: 3 (lower is better) Translates to: VVTARKRSTTMSTFQTTNGDNFD*QRLYHT Trigger: AGTGTGGTAAAGCCTTTGCAAGTCGAAGTTATCTCC...ATTTGTGGTCTGGAATGTTGACATAGTAGTACTTCTCTTCCTAGCAGTTACAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR CAA 90 bp | AATCTTTGCATACCAGATGTCCAAGGAAGCCAGAAGAATGTATCTGAACTTCTGGAAGATAACTTTGACTaGCAAAGGCTTTACCACGCT | + |
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Preference number: 3 (lower is better) Translates to: NLCIPDVQGSQKNVSELLEDNFD*QRLYHA Trigger: AGCGTGGTAAAGCCTTTGCAAGTCAAAGTTATCTTC...CAGAAGTTCAGATACATTCTTCTGGCTTCCTTGGACATCTGGTATGCAAAGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR CAA 90 bp | TGTCAACATTCCAGACCACAAATATGCAACTATAATGCAGAAAATGAAGAGGCCAGAGGCACTATGACATaGACTTTTCTCTGGGATGTG | + |
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Preference number: 3 (lower is better) Translates to: CQHSRPQICNYNAENEEARGTMT*TFLWDV Trigger: CACATCCCAGAGAAAAGTCAATGTCATAGTGCCTCT...GGCCTCTTCATTTTCTGCATTATAGTTGCATATTTGTGGTCTGGAATGTTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR CAA 90 bp | CAGCAACCTCCTTTACCCACAGTGATAATTCTCGGCCGTTCATTTGTGTTTCTTAATGCTTTCATGATTTaGGAGAAGACTATGACATGC | + |
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Preference number: 3 (lower is better) Translates to: QQPPLPTVIILGRSFVFLNAFMI*EKTMTC Trigger: GCATGTCATAGTCTTCTCCAAAATCATGAAAGCATT...AAGAAACACAAATGAACGGCCGAGAATTATCACTGTGGGTAAAGGAGGTTGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR CAA 90 bp | TGCATATGTCATAGCACGTGTGTAGTGATCAGAGAAAACCCTGCATGTTTGTCTTTCTCGGCCGTTCATTaGTGTTTCTTAGAAAGTGTT | + |
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Preference number: 3 (lower is better) Translates to: CICHSTCVVIRENPACLSFSAVH*CFLESV Trigger: AACACTTTCTAAGAAACACAAATGAACGGCCGAGAA...AGACAAACATGCAGGGTTTTCTCTGATCACTACACACGTGCTATGACATATGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR CAA 90 bp | AATCTTTGCATACCAGATGTCCAAGGAAGCCAGAAGAATGTATCTGAACTTCTGTTTGTTCTTGATGTCTaGGGATTTTTGTTGGTGGTG | + |
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Preference number: 3 (lower is better) Translates to: NLCIPDVQGSQKNVSELLFVLDV*GFLLVV Trigger: CACCACCAACAAAAATCCCAAGACATCAAGAACAAA...CAGAAGTTCAGATACATTCTTCTGGCTTCCTTGGACATCTGGTATGCAAAGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR CAA 90 bp | TGTCAACATTCCAGACCACAAATATGCAACTATAATGCAGAAAATGAAGAGGCCCCACATAGTCAAGTTTaGCAGCAAGAATCTTCAACT | + |
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Preference number: 3 (lower is better) Translates to: CQHSRPQICNYNAENEEAPHSQV*QQESST Trigger: AGTTGAAGATTCTTGCTGCAAAACTTGACTATGTGG...GGCCTCTTCATTTTCTGCATTATAGTTGCATATTTGTGGTCTGGAATGTTGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR-3UTR CAA 90 bp | TCCAGACCACAAATATGCAACTATAATGCAGAAAATGAAGAGGCCCCATTATTCACTTCTCTCATGTATTaGAAGACTACTGCTATATGC | + |
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Preference number: 3 (lower is better) Translates to: SRPQICNYNAENEEAPLFTSLMY*KTTAIC Trigger: GCATATAGCAGTAGTCTTCAAATACATGAGAGAAGT...GAATAATGGGGCCTCTTCATTTTCTGCATTATAGTTGCATATTTGTGGTCTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR GCA 72 bp | GAAGTACTACTATGTCAACATTCCAGACCACAAATATaGAACTATAATGCAGAAAATGAAGAGGCCCCATTA | + |
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Preference number: 3 (lower is better) Translates to: EVLLCQHSRPQI*NYNAENEEAPL Trigger: TAATGGGGCCTCTTCATTTTCTGCATTATAGTTGCATATTTGTGGTCTGGAATGTTGACATAGTAGTACTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| CDS-3UTR TCA 90 bp | CACATAGTCAAGTTTTGCAGCAAGAATCTTCAACTGGTGAGTGAACTCACTGGTTTCTTTCCATATCCCTaGTACTCACAAGGCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: HIVKFCSKNLQLVSELTGFFPYP*YSQGWG Trigger: ACCCCAGCCTTGTGAGTATCAGGGATATGGAAAGAA...ACCAGTGAGTTCACTCACCAGTTGAAGATTCTTGCTGCAAAACTTGACTATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| CDS-3UTR TCA 90 bp | TGCATATGTCATAGCACGTGTGTAGTGATCAGAGAAAACCCTGCATGTTTGTCTTCCACTCTTCTTTGGTaGAGTTCACATGCACATCCT | + |
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Preference number: 4 (lower is better) Translates to: CICHSTCVVIRENPACLSSTLLW*SSHAHP Trigger: AGGATGTGCATGTGAACTTCACCAAAGAAGAGTGGA...AGACAAACATGCAGGGTTTTCTCTGATCACTACACACGTGCTATGACATATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| CDS-3UTR TCA 90 bp | CACATAGTCAAGTTTTGCAGCAAGAATCTTCAACTGGTGAGTGAACTCACTGGTAAGATGACTGCGAGTTaGAAAGGCTTTCCCACATTC | + |
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Preference number: 4 (lower is better) Translates to: HIVKFCSKNLQLVSELTGKMTAS*KGFPTF Trigger: GAATGTGGGAAAGCCTTTTCAACTCGCAGTCATCTT...ACCAGTGAGTTCACTCACCAGTTGAAGATTCTTGCTGCAAAACTTGACTATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| CDS-3UTR TCA 90 bp | GTTGTAACTGCTAGGAAGAGAAGTACTACTATGTCAACATTCCAGACCACAAATGTTCTTTCATGTACTTaGAGAGAACTTCGACTTGGA | + |
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Preference number: 4 (lower is better) Translates to: VVTARKRSTTMSTFQTTNVLSCT*RELRLG Trigger: TCCAAGTCGAAGTTCTCTTCAAGTACATGAAAGAAC...ATTTGTGGTCTGGAATGTTGACATAGTAGTACTTCTCTTCCTAGCAGTTACAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| 3UTR CAA 72 bp | TTGGAGAAGACTATGACATGCAGAGGCACTATGACATaGACTTTTCTCTGGGATGTGTTTCAACATTATACT | + |
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Preference number: 4 (lower is better) Translates to: LEKTMTCRGTMT*TFLWDVFQHYT Trigger: AGTATAATGTTGAAACACATCCCAGAGAAAAGTCAATGTCATAGTGCCTCTGCATGTCATAGTCTTCTCCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| CDS-3UTR TCA 90 bp | GTACCTTTCCATCTAACTGAGGTGTTTTTACAATGGCCTATCTTTGAATCAGAGAGTTTTCTTCTACTATaGCTTCTTTCATGCTGTCGA | + |
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Preference number: 4 (lower is better) Translates to: VPFHLTEVFLQWPIFESESFLLL*LLSCCR Trigger: TCGACAGCATGAAAGAAGTCATAGTAGAAGAAAACT...CTCTGATTCAAAGATAGGCCATTGTAAAAACACCTCAGTTAGATGGAAAGGTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| CDS-3UTR GCA 90 bp | GTTGTAACTGCTAGGAAGAGAAGTACTACTATGTCAACATTCCAGACCACAAATTCTGCTGTATGCAAATaGTCTACCACATTCATTACA | + |
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Preference number: 4 (lower is better) Translates to: VVTARKRSTTMSTFQTTNSAVCK*STTFIT Trigger: TGTAATGAATGTGGTAGAGCATTTGCATACAGCAGA...ATTTGTGGTCTGGAATGTTGACATAGTAGTACTTCTCTTCCTAGCAGTTACAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| CDS-3UTR CCA 90 bp | TGTCAACATTCCAGACCACAAATATGCAACTATAATGCAGAAAATGAAGAGGCCAAGAGAACTTCGACTTaGAAAAGCTTTACCACAGTA | + |
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Preference number: 4 (lower is better) Translates to: CQHSRPQICNYNAENEEAKRTST*KSFTTV Trigger: TACTGTGGTAAAGCTTTTCCAAGTCGAAGTTCTCTT...GGCCTCTTCATTTTCTGCATTATAGTTGCATATTTGTGGTCTGGAATGTTGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| CDS-3UTR GCA 90 bp | TCCAGACCACAAATATGCAACTATAATGCAGAAAATGAAGAGGCCCCATTATTCAAGACTATTAGAATTTaGAATGGGTTTACTGCACTG | + |
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Preference number: 4 (lower is better) Translates to: SRPQICNYNAENEEAPLFKTIRI*NGFTAL Trigger: CAGTGCAGTAAACCCATTGCAAATTCTAATAGTCTT...GAATAATGGGGCCTCTTCATTTTCTGCATTATAGTTGCATATTTGTGGTCTGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| CDS-3UTR CAA 90 bp | TGTCAACATTCCAGACCACAAATATGCAACTATAATGCAGAAAATGAAGAGGCCTCCTGTGTGAGTTCTTaGGTGCGTTTGAAGATTACC | + |
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Preference number: 5 (lower is better) Translates to: CQHSRPQICNYNAENEEASCVSS*VRLKIT Trigger: GGTAATCTTCAAACGCACCAAAGAACTCACACAGGA...GGCCTCTTCATTTTCTGCATTATAGTTGCATATTTGTGGTCTGGAATGTTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| CDS-3UTR CAA 90 bp | GTACCTTTCCATCTAACTGAGGTGTTTTTACAATGGCCTATCTTTGAATCAGAGGAAGATTACCTTTACTaGCAAAGGCTTTCCCACACT | + |
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Preference number: 5 (lower is better) Translates to: VPFHLTEVFLQWPIFESEEDYLY*QRLSHT Trigger: AGTGTGGGAAAGCCTTTGCAAGTAAAGGTAATCTTC...CTCTGATTCAAAGATAGGCCATTGTAAAAACACCTCAGTTAGATGGAAAGGTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| CDS-3UTR CAA 90 bp | GTACCTTTCCATCTAACTGAGGTGTTTTTACAATGGCCTATCTTTGAATCAGAGACTTGTAACAGTACATaGCTTCTTTCCATATCCCTG | + |
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Preference number: 5 (lower is better) Translates to: VPFHLTEVFLQWPIFESETCNST*LLSISL Trigger: CAGGGATATGGAAAGAAGCAATGTACTGTTACAAGT...CTCTGATTCAAAGATAGGCCATTGTAAAAACACCTCAGTTAGATGGAAAGGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| CDS-3UTR CAA 90 bp | TCCAGACCACAAATATGCAACTATAATGCAGAAAATGAAGAGGCCCCATTATTCGACTCTTCCGTAAGTTaGAAGAACACTGTTACTTGT | + |
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Preference number: 5 (lower is better) Translates to: SRPQICNYNAENEEAPLFDSSVS*KNTVTC Trigger: ACAAGTAACAGTGTTCTTCAAACTTACGGAAGAGTC...GAATAATGGGGCCTCTTCATTTTCTGCATTATAGTTGCATATTTGTGGTCTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219144.2 |
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| CDS GCA 90 bp | TCTTCTACTATGACTTCTTTCATGCTGTCGAAGACTATTAGAATTTaGAATGGGTTTACTGCACTGATTACGTTTACAGGATTTCTCGTC | + |
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Preference number: 5 (lower is better) Translates to: SSTMTSFMLSKTIRI*NGFTALITFTGFLV Trigger: GACGAGAAATCCTGTAAACGTAATCAGTGCAGTAAACCCATTGCAAATTCTAATAGTCTTCGACAGCATGAAAGAAGTCATAGTAGAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076281.6 ENSMUST00000219144.2 |
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| CDS TCA 72 bp | CGAAGACTATTAGAATTTGCAATGGGTTTACTGCACTaGTTACGTTTACAGGATTTCTCGTCAGTATGGACT | + |
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Preference number: 6 (lower is better) Translates to: RRLLEFAMGLLH*LRLQDFSSVWT Trigger: AGTCCATACTGACGAGAAATCCTGTAAACGTAATCAGTGCAGTAAACCCATTGCAAATTCTAATAGTCTTCG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076281.6 ENSMUST00000219144.2 |
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| CDS CAA 72 bp | ACAGGATTTCTCGTCAGTATGGACTCTTCCGTAAGTTaGAAGAACACTGTTACTTGTAACAGTACATTGCTT | + |
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Preference number: 6 (lower is better) Translates to: TGFLVSMDSSVS*KNTVTCNSTLL Trigger: AAGCAATGTACTGTTACAAGTAACAGTGTTCTTCAAACTTACGGAAGAGTCCATACTGACGAGAAATCCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076281.6 ENSMUST00000219144.2 |
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| CDS GCA 72 bp | ATGACTTCTTTCATGCTGTCGAAGACTATTAGAATTTaGAATGGGTTTACTGCACTGATTACGTTTACAGGA | + |
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Preference number: 6 (lower is better) Translates to: MTSFMLSKTIRI*NGFTALITFTG Trigger: TCCTGTAAACGTAATCAGTGCAGTAAACCCATTGCAAATTCTAATAGTCTTCGACAGCATGAAAGAAGTCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076281.6 ENSMUST00000219144.2 |
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| CDS CAA 90 bp | ATTACGTTTACAGGATTTCTCGTCAGTATGGACTCTTCCGTAAGTTaGAAGAACACTGTTACTTGTAACAGTACATTGCTTCTTTCCATA | + |
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Preference number: 6 (lower is better) Translates to: ITFTGFLVSMDSSVS*KNTVTCNSTLLLSI Trigger: TATGGAAAGAAGCAATGTACTGTTACAAGTAACAGTGTTCTTCAAACTTACGGAAGAGTCCATACTGACGAGAAATCCTGTAAACGTAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076281.6 ENSMUST00000219144.2 |
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