RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP777 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000071477

Ensembl transcript IDs: ENSMUST00000095944.10, ENSMUST00000114583.8, ENSMUST00000125385.2, ENSMUST00000147281.2, ENSMUST00000148362.2

Found 282 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GAAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCCACTGAGCTCAGTCTaGGGGCAGCCGAGGTACCTG +
Preference number: 2 (lower is better)
Translates to: EGTGGKEGSQQKGLGRPAPLSSV*GQPRYL
Trigger: CAGGTACCTCGGCTGCCCCCAGACTGAGCTCAGTGG...AGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
3UTR-3UTR GCA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCGGGGCCTTAGACCCTTaGACCTGGCTGCACATCTGG +
Preference number: 2 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLGALDP*TWLHIW
Trigger: CCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCC...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
3UTR-3UTR CCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGCCACTGAGCTCAGTCTaGGGGCAGCCGAGGTACCTG +
Preference number: 2 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQPLSSV*GQPRYL
Trigger: CAGGTACCTCGGCTGCCCCCAGACTGAGCTCAGTGG...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
3UTR-3UTR CCA 90 bp CGAGTGGCTGGCAGCCAAATCACTGCCCCCGTGCAGATTGTTTTCATCCATTTTCACAGCAGAAGGGCTTaGGGCGCCCCGCTCCCGCCC +
Preference number: 2 (lower is better)
Translates to: RVAGSQITAPVQIVFIHFHSRRA*GAPLPP
Trigger: GGGCGGGAGCGGGGCGCCCCAAGCCCTTCTGCTGTG...AAAATGGATGAAAACAATCTGCACGGGGGCAGTGATTTGGCTGCCAGCCACTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
3UTR-3UTR GCA 90 bp CGAGTGGCTGGCAGCCAAATCACTGCCCCCGTGCAGATTGTTTTCATCCATTTTGGGGCCTTAGACCCTTaGACCTGGCTGCACATCTGG +
Preference number: 2 (lower is better)
Translates to: RVAGSQITAPVQIVFIHFGALDP*TWLHIW
Trigger: CCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCC...AAAATGGATGAAAACAATCTGCACGGGGGCAGTGATTTGGCTGCCAGCCACTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
3UTR-3UTR CCA 90 bp CGAGTGGCTGGCAGCCAAATCACTGCCCCCGTGCAGATTGTTTTCATCCATTTTTTAGACCCTTGCACCTaGCTGCACATCTGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: RVAGSQITAPVQIVFIHFLDPCT*LHIWPG
Trigger: CCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAA...AAAATGGATGAAAACAATCTGCACGGGGGCAGTGATTTGGCTGCCAGCCACTCG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
3UTR-3UTR CCA 90 bp AACCACAGTATCCAAAAGGTAATTAGAAAGTTCTATCCCCGACTAAATGGCCCTCACAGCAGAAGGGCTTaGGGCGCCCCGCTCCCGCCC +
Preference number: 2 (lower is better)
Translates to: NHSIQKVIRKFYPRLNGPHSRRA*GAPLPP
Trigger: GGGCGGGAGCGGGGCGCCCCAAGCCCTTCTGCTGTG...AGGGCCATTTAGTCGGGGATAGAACTTTCTAATTACCTTTTGGATACTGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
3UTR-3UTR GCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGAAATCACTGCCCCCGTaGAGATTGTTTTCATCCATT +
Preference number: 2 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQKSLPP*RLFSSI
Trigger: AATGGATGAAAACAATCTGCACGGGGGCAGTGATTT...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
3UTR-3UTR CAA 90 bp AACCACAGTATCCAAAAGGTAATTAGAAAGTTCTATCCCCGACTAAATGGCCCTAGGGGCCTTAGACCCTaGCACCTGGCTGCACATCTG +
Preference number: 3 (lower is better)
Translates to: NHSIQKVIRKFYPRLNGPRGLRP*HLAAHL
Trigger: CAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCT...AGGGCCATTTAGTCGGGGATAGAACTTTCTAATTACCTTTTGGATACTGTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp GAAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTTCCATGTCCAGCTGCTaGACCGAGACCCCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: EGTGGKEGSQQKGLGRPASMSSC*TETPGR
Trigger: CCGGCCTGGGGTCTCGGTCCAGCAGCTGGACATGGA...AGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGTGCGCTGGTGCAGCGTaGGTTGCTGCTTGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGCAGAA*VAACGG
Trigger: TCCGCCACAAGCAGCAACTCACGCTGCACCAGCGCA...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCGATGCGACGGGCGGCTaGAACTCTTGCCGCACAGAC +
Preference number: 4 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLDATGG*NSCRTD
Trigger: GTCTGTGCGGCAAGAGTTTCAGCCGCCCGTCGCATC...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp TCTGGGGGCAGCCGAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGGCCGTTCACCAGTATaGGTCCGCTGGTGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SGGSRGTCPRGLRPLHLAGRSPV*VRWWRS
Trigger: GCTGCGCCACCAGCGGACTCATACTGGTGAACGGCC...AGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTCGGCTGCCCCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGGGTGGTGCTTCTGCGTaGAGCGCTTGCCACACTCGG +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGGGASA*SACHTR
Trigger: CCGAGTGTGGCAAGCGCTTCACGCAGAAGCACCACC...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCGGTGGTGCTTCTGCGTaGAGCGCTTGCCACACTCGG +
Preference number: 4 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLGGASA*SACHTR
Trigger: CCGAGTGTGGCAAGCGCTTCACGCAGAAGCACCACC...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp TCTGGGGGCAGCCGAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTCCTGTGTGCGCACGCTaGTGCTCCAGCAGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SGGSRGTCPRGLRPLHLAPVCAR*CSSRWC
Trigger: GCACCACCTGCTGGAGCATCAGCGTGCGCACACAGG...AGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTCGGCTGCCCCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp GAAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCGGTTCTCACCCAGGTaGCGTTCACTGTGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: EGTGGKEGSQQKGLGRPARFSPR*RSLCPC
Trigger: GCACGGGCACAGTGAACGGCACCTGGGTGAGAACCG...AGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCCGCTGGAGCCTTCCGTaGACTCCTCGAGCGCGTTCT +
Preference number: 4 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLRWSLP*TPRARS
Trigger: AGAACGCGCTCGAGGAGTCCACGGAAGGCTCCAGCG...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCACCCGGTGGATGCGCTaGTGCAGCGTGAGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLTRWMR*CSVSCC
Trigger: GCAGCAACTCACGCTGCACCAGCGCATCCACCGGGT...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp GAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGCCGCTGCGTACCCGGTaGATGCGCTGGTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: EVPVPGALDPCTWLHIWPPLRTR*MRWCSV
Trigger: CACGCTGCACCAGCGCATCCACCGGGTACGCAGCGG...CGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGCCATGCGTATGCCCATaGATGCTGGGTGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGPCVCP*MLGASL
Trigger: GAGGCTGGCACCCAGCATTCATGGGCATACGCATGG...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp GAAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCGTAGGGCCCCTCCTTaGTGTGGTTACGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: EGTGGKEGSQQKGLGRPARRAPP*CGYAGG
Trigger: TCCACCAGCGTAACCACATCAAGGAGGGGCCCTACG...AGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCTGGGAACTTCTCCATTaGTGCCTGGGGGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLWELLH*CLGAAA
Trigger: TGCGGCTGCCCCCAGGCAGCAATGGAGAAGTTCCCA...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp GAAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTATGTCCAGGTCTGGCTaGTCTCCACAGGGGTCACCC +
Preference number: 4 (lower is better)
Translates to: EGTGGKEGSQQKGLGRPAMSRSG*SPQGSP
Trigger: GGGTGACCCCTGTGGAGAGCAGCCAGACCTGGACAT...AGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGCGGTGGATGCGCTGGTaGAGCGTGAGTTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGRWMRW*SVSCCL
Trigger: CAAGCAGCAACTCACGCTGCACCAGCGCATCCACCG...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCCTCTGCAGTGGGCAGTaGCTGTTCTTTCTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLLCSGQ*LFFLGG
Trigger: GCCGCCCAGAAAGAACAGCCACTGCCCACTGCAGAG...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCCAGCCTCTTCACTGCTaGGTTGCCCAACTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLQPLHC*VAQLQG
Trigger: CCCCTGCAGTTGGGCAACCCAGCAGTGAAGAGGCTG...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGCGCCACTGCCTGAGCTaGGCGATTTGGGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGRHCLS*AIWDVV
Trigger: AACCACGTCCCAAATCGCCCAGCTCAGGCAGTGGCG...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCCGCCACTGCCTGAGCTaGGCGATTTGGGACGTGGTT +
Preference number: 4 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLRHCLS*AIWDVV
Trigger: AACCACGTCCCAAATCGCCCAGCTCAGGCAGTGGCG...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGTGTAGCGGAAGCACTTaGCGCAGTGCGTGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGCSGST*RSACRG
Trigger: ACCCCTGCACGCACTGCGCCAAGTGCTTCCGCTACA...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp GAAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTTGTAGCGGAAGCACTTaGCGCAGTGCGTGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: EGTGGKEGSQQKGLGRPACSGST*RSACRG
Trigger: ACCCCTGCACGCACTGCGCCAAGTGCTTCCGCTACA...AGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp TCTGGGGGCAGCCGAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTCCTGCTCCTCTGTCTTaGTCACGATCCCCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: SGGSRGTCPRGLRPLHLAPAPLS*SRSPPC
Trigger: GCACGGAGGGGATCGTGATCAAGACAGAGGAGCAGG...AGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTCGGCTGCCCCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp TCTGGGGGCAGCCGAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTCGTAGGGCCCCTCCTTaGTGTGGTTACGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: SGGSRGTCPRGLRPLHLARRAPP*CGYAGG
Trigger: TCCACCAGCGTAACCACATCAAGGAGGGGCCCTACG...AGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTCGGCTGCCCCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCCCAAGGGATTGCAAGTaGTGTGGCAGCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLPRDCK*CGSSSS
Trigger: GGAGGACGAGCTGCCACAGCACTTGCAATCCCTTGG...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGTGCCAGCCTCTTCACTaGTGGGTTGCCCAACTGCAG +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGCQPLH*WVAQLQ
Trigger: CTGCAGTTGGGCAACCCAGCAGTGAAGAGGCTGGCA...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp TCTGGGGGCAGCCGAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTCGGTGGATGCGCTGGTaGAGCGTGAGTTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SGGSRGTCPRGLRPLHLARWMRW*SVSCCL
Trigger: CAAGCAGCAACTCACGCTGCACCAGCGCATCCACCG...AGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTCGGCTGCCCCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGCGGTCTCGGGAACTGTaGGTGAGAGAGTCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGRSREL*VRESAS
Trigger: ACTCGCTGACTCTCTCACCCACAGTTCCCGAGACCG...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGTTCCTCTCCACTGCTTaGACAGCAGCCCACACAGCC +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGFLSTA*TAAHTA
Trigger: GGCTGTGTGGGCTGCTGTCCAAGCAGTGGAGAGGAA...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp GAAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTAGTAGTCGCATGGCCTaGGCCTCCAGTTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: EGTGGKEGSQQKGLGRPASSRMA*ASSFLS
Trigger: GGAGAGGAAACTGGAGGCCCAGGCCATGCGACTACT...AGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCAGTAGTCGCATGGCCTaGGCCTCCAGTTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLSSRMA*ASSFLS
Trigger: GGAGAGGAAACTGGAGGCCCAGGCCATGCGACTACT...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCCGATTCCGCTGCTGCTaGCTAGAGTTCCCACGGTTC +
Preference number: 4 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLRFRCC*LEFPRF
Trigger: GAACCGTGGGAACTCTAGCCAGCAGCAGCGGAATCG...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp GAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGACCCGGTGGATGCGCTaGTGCAGCGTGAGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: EVPVPGALDPCTWLHIWPTRWMR*CSVSCC
Trigger: GCAGCAACTCACGCTGCACCAGCGCATCCACCGGGT...CGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGTCCACGCTCCATCTGTaGCATGAGGTCCGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGSTLHL*HEVRFG
Trigger: TCCAAACCGGACCTCATGTCACAGATGGAGCGTGGA...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGTGTCTCCAGACCTTCTaGGCCCTCATCGTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGCLQTF*ALIVGL
Trigger: CAGACCAACGATGAGGGCTCAGAAGGTCTGGAGACA...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp TCTGGGGGCAGCCGAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGGGGTCACCCAGCTCTaGGTCCTGAAAGCCATGTTC +
Preference number: 4 (lower is better)
Translates to: SGGSRGTCPRGLRPLHLAGVTQL*VLKAMF
Trigger: GAACATGGCTTTCAGGACTCAGAGCTGGGTGACCCC...AGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTCGGCTGCCCCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp GAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGCCATGCGTATGCCCATaGATGCTGGGTGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: EVPVPGALDPCTWLHIWPPCVCP*MLGASL
Trigger: GAGGCTGGCACCCAGCATTCATGGGCATACGCATGG...CGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp GAAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCAGTTTCCTCTCCACTaGTTGGACAGCAGCCCACAC +
Preference number: 4 (lower is better)
Translates to: EGTGGKEGSQQKGLGRPAQFPLH*LDSSPH
Trigger: GTGTGGGCTGCTGTCCAAGCAGTGGAGAGGAAACTG...AGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGCAGTTTCCTCTCCACTaGTTGGACAGCAGCCCACAC +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGQFPLH*LDSSPH
Trigger: GTGTGGGCTGCTGTCCAAGCAGTGGAGAGGAAACTG...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCTACCTCCCAGACAGCTaGCCAAGGGATTGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLYLPDS*PRDCKC
Trigger: GCACTTGCAATCCCTTGGGCAGCTGTCTGGGAGGTA...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCGCGTATGCCCATGAATaGTGGGTGCCAGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLAYAHE*WVPASS
Trigger: TGAAGAGGCTGGCACCCAGCATTCATGGGCATACGC...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp TCTGGGGGCAGCCGAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTTGGTGCAGCGTGAGTTaGTGCTTGTGGCGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SGGSRGTCPRGLRPLHLAWCSVS*CLWRKL
Trigger: CAGCTTCCGCCACAAGCAGCAACTCACGCTGCACCA...AGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTCGGCTGCCCCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGTGCAAAGTGGGACTCTaGAGCAAGGGGTCCATGTCG +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGCKVGL*SKGSMS
Trigger: CGACATGGACCCCTTGCTCCAGAGTCCCACTTTGCA...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCTGCAAAGTGGGACTCTaGAGCAAGGGGTCCATGTCG +
Preference number: 4 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLCKVGL*SKGSMS
Trigger: CGACATGGACCCCTTGCTCCAGAGTCCCACTTTGCA...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGCCTCTTGTTCTTGCATaGCTGGCCTCTCTCCACGCT +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGPLVLA*LASLHA
Trigger: AGCGTGGAGAGAGGCCAGCCATGCAAGAACAAGAGG...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCGGGTCTGGTACATACTaGCCTCGTACCTCCCAGACA +
Preference number: 4 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLGSGTY*PRTSQT
Trigger: TGTCTGGGAGGTACGAGGCCAGTATGTACCAGACCC...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGGCCCAACTGCAGGGGTaGGGGGCTTTCCTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQAQLQG*GAFLAL
Trigger: GAGGGCGAGGAAAGCCCCCCACCCCTGCAGTTGGGC...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp TCTGGGGGCAGCCGAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTCGATTCCGCTGCTGCTaGCTAGAGTTCCCACGGTTC +
Preference number: 4 (lower is better)
Translates to: SGGSRGTCPRGLRPLHLARFRCC*LEFPRF
Trigger: GAACCGTGGGAACTCTAGCCAGCAGCAGCGGAATCG...AGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTCGGCTGCCCCCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGGTGTGGGTCCGCAGGTaGTACTTGAGCGACTGTTTG +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGVWVRR*YLSDCL
Trigger: CAAACAGTCGCTCAAGTACCACCTGCGGACCCACAC...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp TCTGGGGGCAGCCGAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTTCCACGCTCCATCTGTaGCATGAGGTCCGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: SGGSRGTCPRGLRPLHLASTLHL*HEVRFG
Trigger: TCCAAACCGGACCTCATGTCACAGATGGAGCGTGGA...AGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTCGGCTGCCCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCGTGCTTGGTCAAGCTTaGCTTGTGGCTGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLVLGQA*LVAEAA
Trigger: AGCAGCTTCAGCCACAAGTCAAGCTTGACCAAGCAC...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGCGCACAGACTGCAAATaGAGGAGACTTCGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGRTDCK*RRLRAC
Trigger: GCAAGCACGAAGTCTCCTTCATTTGCAGTCTGTGCG...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGCATTTGTCCCTGTCCTaGCCTCCAGAGTCAGTAGTC +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGHLSLS*PPESVV
Trigger: GACTACTGACTCTGGAGGGCAGGACAGGGACAAATG...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp TCTGGGGGCAGCCGAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCGTTCTCTTGTTCCTaGATGTCCAGGTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SGGSRGTCPRGLRPLHLAAFSCS*MSRSGC
Trigger: GCAGCCAGACCTGGACATGCAGGAACAAGAGAACGC...AGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTCGGCTGCCCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp GAAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTTGCTGCACCAGCATCTaGTTGAGCTCACTGAACTCG +
Preference number: 4 (lower is better)
Translates to: EGTGGKEGSQQKGLGRPACCTSI*LSSLNS
Trigger: CGAGTTCAGTGAGCTCAAGCAGATGCTGGTGCAGCA...AGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp GAAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTGTGCAGTTTCTCTGCTaGACCAGCATCTGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: EGTGGKEGSQQKGLGRPAVQFLC*TSICLS
Trigger: GCTCAAGCAGATGCTGGTGCAGCAGAGAAACTGCAC...AGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp GAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGAGCTGCCCAAGGGATTaGAAGTGCTGTGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: EVPVPGALDPCTWLHIWPSCPRD*KCCGSS
Trigger: CGAGCTGCCACAGCACTTGCAATCCCTTGGGCAGCT...CGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp TCTGGGGGCAGCCGAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTTGCAGCGTGAGTTGCTaGTTGTGGCGGAAGCTGATC +
Preference number: 4 (lower is better)
Translates to: SGGSRGTCPRGLRPLHLACSVSC*LWRKLI
Trigger: GATCAGCTTCCGCCACAAGCAGCAACTCACGCTGCA...AGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTCGGCTGCCCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGAGCGGAAGCTCTTCTTaGATTCTGGGCACGTGTAGG +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGSGSSS*ILGTCR
Trigger: CCTACACGTGCCCAGAATGCAAGAAGAGCTTCCGCT...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCGCGGCAGAAGAGGTATaGAAGGGAGTGTCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLAAEEV*KGVSFC
Trigger: GCAAAAGGACACTCCCTTCCATACCTCTTCTGCCGC...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGGCGGCAGAAGAGGTATaGAAGGGAGTGTCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGAAEEV*KGVSFC
Trigger: GCAAAAGGACACTCCCTTCCATACCTCTTCTGCCGC...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCTTGTTCTTGCATGGCTaGCCTCTCTCCACGCTCCAT +
Preference number: 4 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLLFLHG*PLSTLH
Trigger: ATGGAGCGTGGAGAGAGGCCAGCCATGCAAGAACAA...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp TCTGGGGGCAGCCGAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGGGTCTGGTACATACTaGCCTCGTACCTCCCAGACA +
Preference number: 4 (lower is better)
Translates to: SGGSRGTCPRGLRPLHLAGSGTY*PRTSQT
Trigger: TGTCTGGGAGGTACGAGGCCAGTATGTACCAGACCC...AGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTCGGCTGCCCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGTATGCCCATGAATGCTaGGTGCCAGCCTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGYAHEC*VPASSL
Trigger: CAGTGAAGAGGCTGGCACCCAGCATTCATGGGCATA...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp GAAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCCCGTGTGTGTGATCTaGTGCTTGGTCAAGCTTGAC +
Preference number: 4 (lower is better)
Translates to: EGTGGKEGSQQKGLGRPAPVCVI*CLVKLD
Trigger: GTCAAGCTTGACCAAGCACCAGATCACACACACGGG...AGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp GAAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTGAGTGCACGCGGCAGTaGTTGGTGAGCTTAGATTTC +
Preference number: 4 (lower is better)
Translates to: EGTGGKEGSQQKGLGRPAECTRQ*LVSLDF
Trigger: GAAATCTAAGCTCACCAACCACTGCCGCGTGCACTC...AGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp TCTGGGGGCAGCCGAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGTGTGGGTCCGCAGGTaGTACTTGAGCGACTGTTTG +
Preference number: 4 (lower is better)
Translates to: SGGSRGTCPRGLRPLHLAVWVRR*YLSDCL
Trigger: CAAACAGTCGCTCAAGTACCACCTGCGGACCCACAC...AGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTCGGCTGCCCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGTGGGGCAAGACACCTTaGCGGGAGGCAGTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQWGKTP*REAVGD
Trigger: GTCTCCCACTGCCTCCCGGCAAGGTGTCTTGCCCCA...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGAGATTTCCCCATTCCTaGTCAGAGAAATGGACGGCG +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGRFPHS*SEKWTA
Trigger: CGCCGTCCATTTCTCTGAGCAGGAATGGGGAAATCT...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp GAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGCGTATGCCCATGAATaGTGGGTGCCAGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: EVPVPGALDPCTWLHIWPAYAHE*WVPASS
Trigger: TGAAGAGGCTGGCACCCAGCATTCATGGGCATACGC...CGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp GAAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTTGTCCTTTTGCAAAGTaGGACTCTGGAGCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: EGTGGKEGSQQKGLGRPACPFAK*DSGARG
Trigger: ACCCCTTGCTCCAGAGTCCCACTTTGCAAAAGGACA...AGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGCGCTGGAGCCTTCCGTaGACTCCTCGAGCGCGTTCT +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQRWSLP*TPRARS
Trigger: AGAACGCGCTCGAGGAGTCCACGGAAGGCTCCAGCG...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGGTCAAGCTTGACTTGTaGCTGAAGCTGCTGTCACAC +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGVKLDL*LKLLSH
Trigger: GTGTGACAGCAGCTTCAGCCACAAGTCAAGCTTGAC...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp TCTGGGGGCAGCCGAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTCCTGCATGCACACGCTaGTGGATCACCAGACTGATA +
Preference number: 4 (lower is better)
Translates to: SGGSRGTCPRGLRPLHLAPACTR*WITRLI
Trigger: TATCAGTCTGGTGATCCACCAGCGTGTGCATGCAGG...AGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTCGGCTGCCCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp TCTGGGGGCAGCCGAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGAGTGCACGCGGCAGTaGTTGGTGAGCTTAGATTTC +
Preference number: 4 (lower is better)
Translates to: SGGSRGTCPRGLRPLHLAECTRQ*LVSLDF
Trigger: GAAATCTAAGCTCACCAACCACTGCCGCGTGCACTC...AGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTCGGCTGCCCCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGCCTGCTCCTCTGTCTTaGTCACGATCCCCTCCGTGC +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQPAPLS*SRSPPC
Trigger: GCACGGAGGGGATCGTGATCAAGACAGAGGAGCAGG...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp GAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGAGCTTGACTTGTGGCTaGAGCTGCTGTCACACTCAG +
Preference number: 4 (lower is better)
Translates to: EVPVPGALDPCTWLHIWPSLTCG*SCCHTQ
Trigger: CTGAGTGTGACAGCAGCTTCAGCCACAAGTCAAGCT...CGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp GAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGTGGATCACCAGACTaGTATGCAAGCGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: EVPVPGALDPCTWLHIWPGGSPD*YASGSS
Trigger: AGAGCTTCCGCTTGCATATCAGTCTGGTGATCCACC...CGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp GAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGCGCACAGACTGCAAATaGAGGAGACTTCGTGCTTGC +
Preference number: 4 (lower is better)
Translates to: EVPVPGALDPCTWLHIWPRTDCK*RRLRAC
Trigger: GCAAGCACGAAGTCTCCTTCATTTGCAGTCTGTGCG...CGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp TCTGGGGGCAGCCGAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTAAGGGAGTGTCCTTTTaGAAAGTGGGACTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SGGSRGTCPRGLRPLHLAKGVSF*KVGLWS
Trigger: GCTCCAGAGTCCCACTTTGCAAAAGGACACTCCCTT...AGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTCGGCTGCCCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGGAACTTCTCCATTGCTaGCTGGGGGCAGCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQELLHC*LGAAAG
Trigger: TCCTGCGGCTGCCCCCAGGCAGCAATGGAGAAGTTC...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGTGGGAACTTCTCCATTaGTGCCTGGGGGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQWELLH*CLGAAA
Trigger: TGCGGCTGCCCCCAGGCAGCAATGGAGAAGTTCCCA...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp GAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGAGCGGAAGCTCTTCTTaGATTCTGGGCACGTGTAGG +
Preference number: 4 (lower is better)
Translates to: EVPVPGALDPCTWLHIWPSGSSS*ILGTCR
Trigger: CCTACACGTGCCCAGAATGCAAGAAGAGCTTCCGCT...CGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGCTCAGGAGAGTGGAGTaGAGCTTCCTGACGGTGGGC +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQLRRVE*SFLTVG
Trigger: GCCCACCGTCAGGAAGCTCCACTCCACTCTCCTGAG...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGCTCTGCAGTGGGCAGTaGCTGTTCTTTCTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQLCSGQ*LFFLGG
Trigger: GCCGCCCAGAAAGAACAGCCACTGCCCACTGCAGAG...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGCAGCCTCTTCACTGCTaGGTTGCCCAACTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQQPLHC*VAQLQG
Trigger: CCCCTGCAGTTGGGCAACCCAGCAGTGAAGAGGCTG...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp TCTGGGGGCAGCCGAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGTCAAGCTTGACTTGTaGCTGAAGCTGCTGTCACAC +
Preference number: 4 (lower is better)
Translates to: SGGSRGTCPRGLRPLHLAVKLDL*LKLLSH
Trigger: GTGTGACAGCAGCTTCAGCCACAAGTCAAGCTTGAC...AGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTCGGCTGCCCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCTTTCTGAAGAACATGTaGCATCTGGCTGGATGTCTC +
Preference number: 4 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLFLKNM*HLAGCL
Trigger: GAGACATCCAGCCAGATGTCACATGTTCTTCAGAAA...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCAGTGAAGGTCCTTTCTaGAGAACATGTGACATCTGG +
Preference number: 4 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLSEGPF*RTCDIW
Trigger: CCAGATGTCACATGTTCTTCAGAAAGGACCTTCACT...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp TCTGGGGGCAGCCGAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTCGACATCATCGAATGTaGCAGGAACCTTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: SGGSRGTCPRGLRPLHLARHHRM*QEPWEL
Trigger: AAGTTCCCAAGGTTCCTGTCACATTCGATGATGTCG...AGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTCGGCTGCCCCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp GAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGAAGGGAGTGTCCTTTTaGAAAGTGGGACTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: EVPVPGALDPCTWLHIWPKGVSF*KVGLWS
Trigger: GCTCCAGAGTCCCACTTTGCAAAAGGACACTCCCTT...CGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp GAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGCTCTCCAGATGATTTaGGAACTCCACAGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: EVPVPGALDPCTWLHIWPALQMI*ELHSRS
Trigger: AGAACGGCTGTGGAGTTCGCAAATCATCTGGAGAGC...CGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCGAACTTCTCCATTGCTaGCTGGGGGCAGCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVELLHC*LGAAAG
Trigger: TCCTGCGGCTGCCCCCAGGCAGCAATGGAGAAGTTC...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR GCA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCTGGGAACTTCTCCATTaGTGCCTGGGGGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVWELLH*CLGAAA
Trigger: TGCGGCTGCCCCCAGGCAGCAATGGAGAAGTTCCCA...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR GCA 90 bp GAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGCCCTCATCGTTGGTCTaGACCTCGATCTTAATCACG +
Preference number: 4 (lower is better)
Translates to: EVPVPGALDPCTWLHIWPPSSLV*TSILIT
Trigger: CGTGATTAAGATCGAGGTGCAGACCAACGATGAGGG...CGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGCCAAGGGATTGCAAGTaGTGTGGCAGCTCGTCCTCC +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQPRDCK*CGSSSS
Trigger: GGAGGACGAGCTGCCACAGCACTTGCAATCCCTTGG...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGAGCTGCCCAAGGGATTaGAAGTGCTGTGGCAGCTCG +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQSCPRD*KCCGSS
Trigger: CGAGCTGCCACAGCACTTGCAATCCCTTGGGCAGCT...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGTGGTGCAGCGTGAGTTaGTGCTTGTGGCGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQWCSVS*CLWRKL
Trigger: CAGCTTCCGCCACAAGCAGCAACTCACGCTGCACCA...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp GAAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTATCACCAGACTGATATaGAAGCGGAAGCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: EGTGGKEGSQQKGLGRPAITRLI*KRKLFL
Trigger: CAAGAAGAGCTTCCGCTTGCATATCAGTCTGGTGAT...AGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCCTCTGCAGTGGGCAGTaGCTGTTCTTTCTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVLCSGQ*LFFLGG
Trigger: GCCGCCCAGAAAGAACAGCCACTGCCCACTGCAGAG...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR CCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGTTCCTCTCCACTGCTTaGACAGCAGCCCACACAGCC +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQFLSTA*TAAHTA
Trigger: GGCTGTGTGGGCTGCTGTCCAAGCAGTGGAGAGGAA...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGGAGTCAGTAGTCGCATaGCCTGGGCCTCCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQESVVA*PGPPVS
Trigger: GGAAACTGGAGGCCCAGGCCATGCGACTACTGACTC...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp CGAGTGGCTGGCAGCCAAATCACTGCCCCCGTGCAGATTGTTTTCATCCATTTTGCCCAACTGCAGGGGTaGGGGGCTTTCCTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: RVAGSQITAPVQIVFIHFAQLQG*GAFLAL
Trigger: GAGGGCGAGGAAAGCCCCCCACCCCTGCAGTTGGGC...AAAATGGATGAAAACAATCTGCACGGGGGCAGTGATTTGGCTGCCAGCCACTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp CGAGTGGCTGGCAGCCAAATCACTGCCCCCGTGCAGATTGTTTTCATCCATTTTCCGCTGCGTACCCGGTaGATGCGCTGGTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: RVAGSQITAPVQIVFIHFPLRTR*MRWCSV
Trigger: CACGCTGCACCAGCGCATCCACCGGGTACGCAGCGG...AAAATGGATGAAAACAATCTGCACGGGGGCAGTGATTTGGCTGCCAGCCACTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp CGAGTGGCTGGCAGCCAAATCACTGCCCCCGTGCAGATTGTTTTCATCCATTTTGGCCGTTCACCAGTATaGGTCCGCTGGTGGCGCAGC +
Preference number: 4 (lower is better)
Translates to: RVAGSQITAPVQIVFIHFGRSPV*VRWWRS
Trigger: GCTGCGCCACCAGCGGACTCATACTGGTGAACGGCC...AAAATGGATGAAAACAATCTGCACGGGGGCAGTGATTTGGCTGCCAGCCACTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGCCAGAGACTCATAGTTaGCCCTCATTACATTCTTGT +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGPETHS*PSLHSC
Trigger: ACAAGAATGTAATGAGGGGCAACTATGAGTCTCTGG...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGTGCAGCGTGAGTTGCTaGTTGTGGCGGAAGCTGATC +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQCSVSC*LWRKLI
Trigger: GATCAGCTTCCGCCACAAGCAGCAACTCACGCTGCA...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGAGGAGGAACTTCTTTTaGAGGAAGAATGCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGRRNFF*RKNARR
Trigger: CCTTCTTGCATTCTTCCTCCAAAAGAAGTTCCTCCT...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCTTCCTCTCCACTGCTTaGACAGCAGCCCACACAGCC +
Preference number: 4 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVFLSTA*TAAHTA
Trigger: GGCTGTGTGGGCTGCTGTCCAAGCAGTGGAGAGGAA...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR CCA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCAGTAGTCGCATGGCCTaGGCCTCCAGTTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVSSRMA*ASSFLS
Trigger: GGAGAGGAAACTGGAGGCCCAGGCCATGCGACTACT...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR CCA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCGAGTCAGTAGTCGCATaGCCTGGGCCTCCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVESVVA*PGPPVS
Trigger: GGAAACTGGAGGCCCAGGCCATGCGACTACTGACTC...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR CCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGCCTCTTGTTCTTGCATaGCTGGCCTCTCTCCACGCT +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQPLVLA*LASLHA
Trigger: AGCGTGGAGAGAGGCCAGCCATGCAAGAACAAGAGG...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGATGTGGTTACGCTGGTaGATGATGAGGTTAATCTTC +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGMWLRW*MMRLIF
Trigger: GAAGATTAACCTCATCATCCACCAGCGTAACCACAT...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGTTGATGTGGTTACGCTaGTGGATGATGAGGTTAATC +
Preference number: 4 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGLMWLR*WMMRLI
Trigger: GATTAACCTCATCATCCACCAGCGTAACCACATCAA...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCTCCACGCTCCATCTGTaGCATGAGGTCCGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVSTLHL*HEVRFG
Trigger: TCCAAACCGGACCTCATGTCACAGATGGAGCGTGGA...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR TCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGGTGCTTGGTCAAGCTTaGCTTGTGGCTGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQVLGQA*LVAEAA
Trigger: AGCAGCTTCAGCCACAAGTCAAGCTTGACCAAGCAC...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp CGAGTGGCTGGCAGCCAAATCACTGCCCCCGTGCAGATTGTTTTCATCCATTTTGATGCGACGGGCGGCTaGAACTCTTGCCGCACAGAC +
Preference number: 4 (lower is better)
Translates to: RVAGSQITAPVQIVFIHFDATGG*NSCRTD
Trigger: GTCTGTGCGGCAAGAGTTTCAGCCGCCCGTCGCATC...AAAATGGATGAAAACAATCTGCACGGGGGCAGTGATTTGGCTGCCAGCCACTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCCAGTTTCCTCTCCACTaGTTGGACAGCAGCCCACAC +
Preference number: 4 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVQFPLH*LDSSPH
Trigger: GTGTGGGCTGCTGTCCAAGCAGTGGAGAGGAAACTG...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR GCA 90 bp TCTGGGGGCAGCCGAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTCCAGAGACTCATAGTTaGCCCTCATTACATTCTTGT +
Preference number: 4 (lower is better)
Translates to: SGGSRGTCPRGLRPLHLAPETHS*PSLHSC
Trigger: ACAAGAATGTAATGAGGGGCAACTATGAGTCTCTGG...AGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTCGGCTGCCCCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGTCCGTGCAGTTTCTCTaGTGCACCAGCATCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQSVQFL*CTSICL
Trigger: CAAGCAGATGCTGGTGCAGCAGAGAAACTGCACGGA...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp CGAGTGGCTGGCAGCCAAATCACTGCCCCCGTGCAGATTGTTTTCATCCATTTTCGGTTCTCACCCAGGTaGCGTTCACTGTGCCCGTGC +
Preference number: 4 (lower is better)
Translates to: RVAGSQITAPVQIVFIHFRFSPR*RSLCPC
Trigger: GCACGGGCACAGTGAACGGCACCTGGGTGAGAACCG...AAAATGGATGAAAACAATCTGCACGGGGGCAGTGATTTGGCTGCCAGCCACTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCTGCAAAGTGGGACTCTaGAGCAAGGGGTCCATGTCG +
Preference number: 4 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVCKVGL*SKGSMS
Trigger: CGACATGGACCCCTTGCTCCAGAGTCCCACTTTGCA...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR CCA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCCCTCTTGTTCTTGCATaGCTGGCCTCTCTCCACGCT +
Preference number: 4 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVPLVLA*LASLHA
Trigger: AGCGTGGAGAGAGGCCAGCCATGCAAGAACAAGAGG...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR CCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGTATGCCCATGAATGCTaGGTGCCAGCCTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQYAHEC*VPASSL
Trigger: CAGTGAAGAGGCTGGCACCCAGCATTCATGGGCATA...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGGCTCCATCTGTGACATaGGGTCCGGTTTGGATATTG +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQAPSVT*GPVWIL
Trigger: CAATATCCAAACCGGACCTCATGTCACAGATGGAGC...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCCATTTGTCCCTGTCCTaGCCTCCAGAGTCAGTAGTC +
Preference number: 4 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVHLSLS*PPESVV
Trigger: GACTACTGACTCTGGAGGGCAGGACAGGGACAAATG...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR GCA 90 bp CGAGTGGCTGGCAGCCAAATCACTGCCCCCGTGCAGATTGTTTTCATCCATTTTGAACTTCTCCATTGCTaGCTGGGGGCAGCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: RVAGSQITAPVQIVFIHFELLHC*LGAAAG
Trigger: TCCTGCGGCTGCCCCCAGGCAGCAATGGAGAAGTTC...AAAATGGATGAAAACAATCTGCACGGGGGCAGTGATTTGGCTGCCAGCCACTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGAGATTTCCCCATTCCTaGTCAGAGAAATGGACGGCG +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQRFPHS*SEKWTA
Trigger: CGCCGTCCATTTCTCTGAGCAGGAATGGGGAAATCT...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGCCCTCATCGTTGGTCTaGACCTCGATCTTAATCACG +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQPSSLV*TSILIT
Trigger: CGTGATTAAGATCGAGGTGCAGACCAACGATGAGGG...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp CGAGTGGCTGGCAGCCAAATCACTGCCCCCGTGCAGATTGTTTTCATCCATTTTCTCAGGAGAGTGGAGTaGAGCTTCCTGACGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RVAGSQITAPVQIVFIHFLRRVE*SFLTVG
Trigger: GCCCACCGTCAGGAAGCTCCACTCCACTCTCCTGAG...AAAATGGATGAAAACAATCTGCACGGGGGCAGTGATTTGGCTGCCAGCCACTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCGCGGCAGAAGAGGTATaGAAGGGAGTGTCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVAAEEV*KGVSFC
Trigger: GCAAAAGGACACTCCCTTCCATACCTCTTCTGCCGC...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR CCA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCTTGTTCTTGCATGGCTaGCCTCTCTCCACGCTCCAT +
Preference number: 4 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVLFLHG*PLSTLH
Trigger: ATGGAGCGTGGAGAGAGGCCAGCCATGCAAGAACAA...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR TCA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCGCTCCATCTGTGACATaGGGTCCGGTTTGGATATTG +
Preference number: 4 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVAPSVT*GPVWIL
Trigger: CAATATCCAAACCGGACCTCATGTCACAGATGGAGC...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR GCA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCAAGGGAGTGTCCTTTTaGAAAGTGGGACTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVKGVSF*KVGLWS
Trigger: GCTCCAGAGTCCCACTTTGCAAAAGGACACTCCCTT...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR GCA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCGCTCTCCAGATGATTTaGGAACTCCACAGCCGTTCT +
Preference number: 4 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVALQMI*ELHSRS
Trigger: AGAACGGCTGTGGAGTTCGCAAATCATCTGGAGAGC...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR GCA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCAGATTTCCCCATTCCTaGTCAGAGAAATGGACGGCG +
Preference number: 4 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVRFPHS*SEKWTA
Trigger: CGCCGTCCATTTCTCTGAGCAGGAATGGGGAAATCT...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR CCA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCTGTCCTTTTGCAAAGTaGGACTCTGGAGCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVCPFAK*DSGARG
Trigger: ACCCCTTGCTCCAGAGTCCCACTTTGCAAAAGGACA...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR CCA 90 bp CGAGTGGCTGGCAGCCAAATCACTGCCCCCGTGCAGATTGTTTTCATCCATTTTGAGTCAGTAGTCGCATaGCCTGGGCCTCCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: RVAGSQITAPVQIVFIHFESVVA*PGPPVS
Trigger: GGAAACTGGAGGCCCAGGCCATGCGACTACTGACTC...AAAATGGATGAAAACAATCTGCACGGGGGCAGTGATTTGGCTGCCAGCCACTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCCCAGTACAACCCACTTaGTCTCCAGATGATTTGCGA +
Preference number: 4 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVPVQPT*SPDDLR
Trigger: TCGCAAATCATCTGGAGAGCAAGTGGGTTGTACTGG...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR GCA 90 bp CGAGTGGCTGGCAGCCAAATCACTGCCCCCGTGCAGATTGTTTTCATCCATTTTTACCTCCCAGACAGCTaGCCAAGGGATTGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: RVAGSQITAPVQIVFIHFYLPDS*PRDCKC
Trigger: GCACTTGCAATCCCTTGGGCAGCTGTCTGGGAGGTA...AAAATGGATGAAAACAATCTGCACGGGGGCAGTGATTTGGCTGCCAGCCACTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGATGTGGTTACGCTGGTaGATGATGAGGTTAATCTTC +
Preference number: 4 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQMWLRW*MMRLIF
Trigger: GAAGATTAACCTCATCATCCACCAGCGTAACCACAT...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp CGAGTGGCTGGCAGCCAAATCACTGCCCCCGTGCAGATTGTTTTCATCCATTTTCCTGCATGCACACGCTaGTGGATCACCAGACTGATA +
Preference number: 4 (lower is better)
Translates to: RVAGSQITAPVQIVFIHFPACTR*WITRLI
Trigger: TATCAGTCTGGTGATCCACCAGCGTGTGCATGCAGG...AAAATGGATGAAAACAATCTGCACGGGGGCAGTGATTTGGCTGCCAGCCACTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp CGAGTGGCTGGCAGCCAAATCACTGCCCCCGTGCAGATTGTTTTCATCCATTTTGCTCCATCTGTGACATaGGGTCCGGTTTGGATATTG +
Preference number: 4 (lower is better)
Translates to: RVAGSQITAPVQIVFIHFAPSVT*GPVWIL
Trigger: CAATATCCAAACCGGACCTCATGTCACAGATGGAGC...AAAATGGATGAAAACAATCTGCACGGGGGCAGTGATTTGGCTGCCAGCCACTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp AACCACAGTATCCAAAAGGTAATTAGAAAGTTCTATCCCCGACTAAATGGCCCTCCTGTGTGCGCACGCTaGTGCTCCAGCAGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: NHSIQKVIRKFYPRLNGPPVCAR*CSSRWC
Trigger: GCACCACCTGCTGGAGCATCAGCGTGCGCACACAGG...AGGGCCATTTAGTCGGGGATAGAACTTTCTAATTACCTTTTGGATACTGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCCCAGAGACTCATAGTTaGCCCTCATTACATTCTTGT +
Preference number: 4 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVPETHS*PSLHSC
Trigger: ACAAGAATGTAATGAGGGGCAACTATGAGTCTCTGG...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR GCA 90 bp AACCACAGTATCCAAAAGGTAATTAGAAAGTTCTATCCCCGACTAAATGGCCCTACTTGGCGCAGTGCGTaGAGGGGTATGGCCGCTCGC +
Preference number: 4 (lower is better)
Translates to: NHSIQKVIRKFYPRLNGPTWRSA*RGMAAR
Trigger: GCGAGCGGCCATACCCCTGCACGCACTGCGCCAAGT...AGGGCCATTTAGTCGGGGATAGAACTTTCTAATTACCTTTTGGATACTGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp AACCACAGTATCCAAAAGGTAATTAGAAAGTTCTATCCCCGACTAAATGGCCCTTGCGCTGGTGCAGCGTaGGTTGCTGCTTGTGGCGGA +
Preference number: 4 (lower is better)
Translates to: NHSIQKVIRKFYPRLNGPCAGAA*VAACGG
Trigger: TCCGCCACAAGCAGCAACTCACGCTGCACCAGCGCA...AGGGCCATTTAGTCGGGGATAGAACTTTCTAATTACCTTTTGGATACTGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp AACCACAGTATCCAAAAGGTAATTAGAAAGTTCTATCCCCGACTAAATGGCCCTTGGGGCAAGACACCTTaGCGGGAGGCAGTGGGAGAC +
Preference number: 4 (lower is better)
Translates to: NHSIQKVIRKFYPRLNGPWGKTP*REAVGD
Trigger: GTCTCCCACTGCCTCCCGGCAAGGTGTCTTGCCCCA...AGGGCCATTTAGTCGGGGATAGAACTTTCTAATTACCTTTTGGATACTGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp CGAGTGGCTGGCAGCCAAATCACTGCCCCCGTGCAGATTGTTTTCATCCATTTTTTTCTGAAGAACATGTaGCATCTGGCTGGATGTCTC +
Preference number: 4 (lower is better)
Translates to: RVAGSQITAPVQIVFIHFFLKNM*HLAGCL
Trigger: GAGACATCCAGCCAGATGTCACATGTTCTTCAGAAA...AAAATGGATGAAAACAATCTGCACGGGGGCAGTGATTTGGCTGCCAGCCACTCG
49% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp CGAGTGGCTGGCAGCCAAATCACTGCCCCCGTGCAGATTGTTTTCATCCATTTTAGTGAAGGTCCTTTCTaGAGAACATGTGACATCTGG +
Preference number: 4 (lower is better)
Translates to: RVAGSQITAPVQIVFIHFSEGPF*RTCDIW
Trigger: CCAGATGTCACATGTTCTTCAGAAAGGACCTTCACT...AAAATGGATGAAAACAATCTGCACGGGGGCAGTGATTTGGCTGCCAGCCACTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp AACCACAGTATCCAAAAGGTAATTAGAAAGTTCTATCCCCGACTAAATGGCCCTATGTCCAGGTCTGGCTaGTCTCCACAGGGGTCACCC +
Preference number: 4 (lower is better)
Translates to: NHSIQKVIRKFYPRLNGPMSRSG*SPQGSP
Trigger: GGGTGACCCCTGTGGAGAGCAGCCAGACCTGGACAT...AGGGCCATTTAGTCGGGGATAGAACTTTCTAATTACCTTTTGGATACTGTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp AACCACAGTATCCAAAAGGTAATTAGAAAGTTCTATCCCCGACTAAATGGCCCTGGGGTCACCCAGCTCTaGGTCCTGAAAGCCATGTTC +
Preference number: 4 (lower is better)
Translates to: NHSIQKVIRKFYPRLNGPGVTQL*VLKAMF
Trigger: GAACATGGCTTTCAGGACTCAGAGCTGGGTGACCCC...AGGGCCATTTAGTCGGGGATAGAACTTTCTAATTACCTTTTGGATACTGTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp CGAGTGGCTGGCAGCCAAATCACTGCCCCCGTGCAGATTGTTTTCATCCATTTTAGGAGGAACTTCTTTTaGAGGAAGAATGCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: RVAGSQITAPVQIVFIHFRRNFF*RKNARR
Trigger: CCTTCTTGCATTCTTCCTCCAAAAGAAGTTCCTCCT...AAAATGGATGAAAACAATCTGCACGGGGGCAGTGATTTGGCTGCCAGCCACTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp AACCACAGTATCCAAAAGGTAATTAGAAAGTTCTATCCCCGACTAAATGGCCCTGCGTTCTCTTGTTCCTaGATGTCCAGGTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: NHSIQKVIRKFYPRLNGPAFSCS*MSRSGC
Trigger: GCAGCCAGACCTGGACATGCAGGAACAAGAGAACGC...AGGGCCATTTAGTCGGGGATAGAACTTTCTAATTACCTTTTGGATACTGTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR TCA 90 bp AACCACAGTATCCAAAAGGTAATTAGAAAGTTCTATCCCCGACTAAATGGCCCTGGTGGATCACCAGACTaGTATGCAAGCGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: NHSIQKVIRKFYPRLNGPGGSPD*YASGSS
Trigger: AGAGCTTCCGCTTGCATATCAGTCTGGTGATCCACC...AGGGCCATTTAGTCGGGGATAGAACTTTCTAATTACCTTTTGGATACTGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp AACCACAGTATCCAAAAGGTAATTAGAAAGTTCTATCCCCGACTAAATGGCCCTCATTTGTCCCTGTCCTaGCCTCCAGAGTCAGTAGTC +
Preference number: 4 (lower is better)
Translates to: NHSIQKVIRKFYPRLNGPHLSLS*PPESVV
Trigger: GACTACTGACTCTGGAGGGCAGGACAGGGACAAATG...AGGGCCATTTAGTCGGGGATAGAACTTTCTAATTACCTTTTGGATACTGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp AACCACAGTATCCAAAAGGTAATTAGAAAGTTCTATCCCCGACTAAATGGCCCTTCCGTGCAGTTTCTCTaGTGCACCAGCATCTGCTTG +
Preference number: 4 (lower is better)
Translates to: NHSIQKVIRKFYPRLNGPSVQFL*CTSICL
Trigger: CAAGCAGATGCTGGTGCAGCAGAGAAACTGCACGGA...AGGGCCATTTAGTCGGGGATAGAACTTTCTAATTACCTTTTGGATACTGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp AACCACAGTATCCAAAAGGTAATTAGAAAGTTCTATCCCCGACTAAATGGCCCTTTGTTCTTGCATGGCTaGCCTCTCTCCACGCTCCAT +
Preference number: 4 (lower is better)
Translates to: NHSIQKVIRKFYPRLNGPLFLHG*PLSTLH
Trigger: ATGGAGCGTGGAGAGAGGCCAGCCATGCAAGAACAA...AGGGCCATTTAGTCGGGGATAGAACTTTCTAATTACCTTTTGGATACTGTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR GCA 90 bp AACCACAGTATCCAAAAGGTAATTAGAAAGTTCTATCCCCGACTAAATGGCCCTCCAGTACAACCCACTTaGTCTCCAGATGATTTGCGA +
Preference number: 4 (lower is better)
Translates to: NHSIQKVIRKFYPRLNGPPVQPT*SPDDLR
Trigger: TCGCAAATCATCTGGAGAGCAAGTGGGTTGTACTGG...AGGGCCATTTAGTCGGGGATAGAACTTTCTAATTACCTTTTGGATACTGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CCA 90 bp AACCACAGTATCCAAAAGGTAATTAGAAAGTTCTATCCCCGACTAAATGGCCCTTTGATGTGGTTACGCTaGTGGATGATGAGGTTAATC +
Preference number: 4 (lower is better)
Translates to: NHSIQKVIRKFYPRLNGPLMWLR*WMMRLI
Trigger: GATTAACCTCATCATCCACCAGCGTAACCACATCAA...AGGGCCATTTAGTCGGGGATAGAACTTTCTAATTACCTTTTGGATACTGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCCTGGGGCAAGACACCTaGCCGGGAGGCAGTGGGAGA +
Preference number: 5 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLLGQDT*PGGSGR
Trigger: TCTCCCACTGCCTCCCGGCAAGGTGTCTTGCCCCAG...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp GAAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCTGGGGCAAGACACCTaGCCGGGAGGCAGTGGGAGA +
Preference number: 5 (lower is better)
Translates to: EGTGGKEGSQQKGLGRPALGQDT*PGGSGR
Trigger: TCTCCCACTGCCTCCCGGCAAGGTGTCTTGCCCCAG...AGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS GCA 90 bp CCCGTGCCCGTGCCCATGCCCATGCGTATGCCCATGAATGCTGGGTaGCAGCCTCTTCACTGCTGGGTTGCCCAACTGCAGGGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: PVPVPMPMRMPMNAG*QPLHCWVAQLQGWG
Trigger: CCCCCACCCCTGCAGTTGGGCAACCCAGCAGTGAAGAGGCTGGCACCCAGCATTCATGGGCATACGCATGGGCATGGGCACGGGCACGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGCTCTTCACTGCTGGGTaGCCCAACTGCAGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGLFTAG*PNCRGG
Trigger: CCCACCCCTGCAGTTGGGCAACCCAGCAGTGAAGAG...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCCTCTTCACTGCTGGGTaGCCCAACTGCAGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLLFTAG*PNCRGG
Trigger: CCCACCCCTGCAGTTGGGCAACCCAGCAGTGAAGAG...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp TCTGGGGGCAGCCGAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTTTGGGAACTTCTCCATaGCTGCCTGGGGGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: SGGSRGTCPRGLRPLHLALGTSP*LPGGSR
Trigger: GCGGCTGCCCCCAGGCAGCAATGGAGAAGTTCCCAA...AGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTCGGCTGCCCCCAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS GCA 90 bp CACTGTGCCCGTGCCCGTGCCCATGCCCATGCGTATGCCCATGAATaGTGGGTGCCAGCCTCTTCACTGCTGGGTTGCCCAACTGCAGGG +
Preference number: 5 (lower is better)
Translates to: HCARARAHAHAYAHE*WVPASSLLGCPTAG
Trigger: CCCTGCAGTTGGGCAACCCAGCAGTGAAGAGGCTGGCACCCAGCATTCATGGGCATACGCATGGGCATGGGCACGGGCACGGGCACAGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS GCA 90 bp CGATTCCGCTGCTGCTGGCTAGAGTTCCCACGGTTCTCACCCAGGTaGCGTTCACTGTGCCCGTGCCCGTGCCCATGCCCATGCGTATGC +
Preference number: 5 (lower is better)
Translates to: RFRCCWLEFPRFSPR*RSLCPCPCPCPCVC
Trigger: GCATACGCATGGGCATGGGCACGGGCACGGGCACAGTGAACGGCACCTGGGTGAGAACCGTGGGAACTCTAGCCAGCAGCAGCGGAATCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS CCA 90 bp TGTGCCCGTGCCCGTGCCCATGCCCATGCGTATGCCCATGAATGCTaGGTGCCAGCCTCTTCACTGCTGGGTTGCCCAACTGCAGGGGTG +
Preference number: 5 (lower is better)
Translates to: CARARAHAHAYAHEC*VPASSLLGCPTAGV
Trigger: CACCCCTGCAGTTGGGCAACCCAGCAGTGAAGAGGCTGGCACCCAGCATTCATGGGCATACGCATGGGCATGGGCACGGGCACGGGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCTTTCCTCTCCACTGCTaGGACAGCAGCCCACACAGC +
Preference number: 5 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLFPLHC*DSSPHS
Trigger: GCTGTGTGGGCTGCTGTCCAAGCAGTGGAGAGGAAA...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp GAAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCTCGAGCGCGTTCTCTaGTTCCTGCATGTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: EGTGGKEGSQQKGLGRPALERVL*FLHVQV
Trigger: GACCTGGACATGCAGGAACAAGAGAACGCGCTCGAG...AGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp TGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGGGGCAGGGGGGCGGCTGAAACTCTaGCCGCACAGACTGCAAATG +
Preference number: 5 (lower is better)
Translates to: CPRGLRPLHLAAHLAGAGGRLKL*PHRLQM
Trigger: CATTTGCAGTCTGTGCGGCAAGAGTTTCAGCCGCCC...CCCTGCCCCGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp GAAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTGGGCGGCTGAAACTCTaGCCGCACAGACTGCAAATG +
Preference number: 5 (lower is better)
Translates to: EGTGGKEGSQQKGLGRPAGRLKL*PHRLQM
Trigger: CATTTGCAGTCTGTGCGGCAAGAGTTTCAGCCGCCC...AGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS TCA 90 bp CGTTCACTGTGCCCGTGCCCGTGCCCATGCCCATGCGTATGCCCATaGATGCTGGGTGCCAGCCTCTTCACTGCTGGGTTGCCCAACTGC +
Preference number: 5 (lower is better)
Translates to: RSLCPCPCPCPCVCP*MLGASLFTAGLPNC
Trigger: GCAGTTGGGCAACCCAGCAGTGAAGAGGCTGGCACCCAGCATTCATGGGCATACGCATGGGCATGGGCACGGGCACGGGCACAGTGAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp GAAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTTGCACCAGCATCTGCTaGAGCTCACTGAACTCGCTG +
Preference number: 5 (lower is better)
Translates to: EGTGGKEGSQQKGLGRPACTSIC*SSLNSL
Trigger: CAGCGAGTTCAGTGAGCTCAAGCAGATGCTGGTGCA...AGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCAGCGTGAGTTGCTGCTaGTGGCGGAAGCTGATCTCA +
Preference number: 5 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLSVSCC*WRKLIS
Trigger: TGAGATCAGCTTCCGCCACAAGCAGCAACTCACGCT...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp GAAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTAGCGTGAGTTGCTGCTaGTGGCGGAAGCTGATCTCA +
Preference number: 5 (lower is better)
Translates to: EGTGGKEGSQQKGLGRPASVSCC*WRKLIS
Trigger: TGAGATCAGCTTCCGCCACAAGCAGCAACTCACGCT...AGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp GAAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCTGGTGAGGTGTGTCTaGCTCAGAAGTGGCAGGATA +
Preference number: 5 (lower is better)
Translates to: EGTGGKEGSQQKGLGRPALVRCV*LRSGRI
Trigger: TATCCTGCCACTTCTGAGCAAGACACACCTCACCAG...AGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCAGAATCCTCTTGTTCTaGCATGGCTGGCCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLRILLF*HGWPLS
Trigger: GGAGAGAGGCCAGCCATGCAAGAACAAGAGGATTCT...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp AAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTCTCTGAGCCCTCATCGTaGGTCTGCACCTCGATCTTA +
Preference number: 5 (lower is better)
Translates to: KGREGRRVHSRRAWGAPLSEPSS*VCTSIL
Trigger: TAAGATCGAGGTGCAGACCAACGATGAGGGCTCAGA...GAGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp GAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGCTCGAGCGCGTTCTCTaGTTCCTGCATGTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: EVPVPGALDPCTWLHIWPLERVL*FLHVQV
Trigger: GACCTGGACATGCAGGAACAAGAGAACGCGCTCGAG...CGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp TCTGGGGGCAGCCGAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTTGCACCAGCATCTGCTaGAGCTCACTGAACTCGCTG +
Preference number: 5 (lower is better)
Translates to: SGGSRGTCPRGLRPLHLACTSIC*SSLNSL
Trigger: CAGCGAGTTCAGTGAGCTCAAGCAGATGCTGGTGCA...AGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTCGGCTGCCCCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp GAAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTTGCACGCGGCAGTGGTaGGTGAGCTTAGATTTCTCA +
Preference number: 5 (lower is better)
Translates to: EGTGGKEGSQQKGLGRPACTRQW*VSLDFS
Trigger: TGAGAAATCTAAGCTCACCAACCACTGCCGCGTGCA...AGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS GCA 90 bp CACTCCATGCAAGTGAAGGGCCTCTCACCACGCCGATTCCGCTGCTaGTGGCTAGAGTTCCCACGGTTCTCACCCAGGTGCCGTTCACTG +
Preference number: 5 (lower is better)
Translates to: HSMQVKGLSPRRFRC*WLEFPRFSPRCRSL
Trigger: CAGTGAACGGCACCTGGGTGAGAACCGTGGGAACTCTAGCCAGCAGCAGCGGAATCGGCGTGGTGAGAGGCCCTTCACTTGCATGGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS GCA 90 bp CCACACTCCATGCAAGTGAAGGGCCTCTCACCACGCCGATTCCGCTaGTGCTGGCTAGAGTTCCCACGGTTCTCACCCAGGTGCCGTTCA +
Preference number: 5 (lower is better)
Translates to: PHSMQVKGLSPRRFR*CWLEFPRFSPRCRS
Trigger: TGAACGGCACCTGGGTGAGAACCGTGGGAACTCTAGCCAGCAGCAGCGGAATCGGCGTGGTGAGAGGCCCTTCACTTGCATGGAGTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS CCA 90 bp TCCATGCAAGTGAAGGGCCTCTCACCACGCCGATTCCGCTGCTGCTaGCTAGAGTTCCCACGGTTCTCACCCAGGTGCCGTTCACTGTGC +
Preference number: 5 (lower is better)
Translates to: SMQVKGLSPRRFRCC*LEFPRFSPRCRSLC
Trigger: GCACAGTGAACGGCACCTGGGTGAGAACCGTGGGAACTCTAGCCAGCAGCAGCGGAATCGGCGTGGTGAGAGGCCCTTCACTTGCATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS CCA 90 bp GGAGTCGAGCAGGGGCCTGACGCACAGACTCTTCGTGTGGGACACTaGAGAATGACAGTGGTGACGAGCGATCGTCCTCCATGTCCAGCT +
Preference number: 5 (lower is better)
Translates to: GVEQGPDAQTLRVGH*RMTVVTSDRPPCPA
Trigger: AGCTGGACATGGAGGACGATCGCTCGTCACCACTGTCATTCTCCAGTGTCCCACACGAAGAGTCTGTGCGTCAGGCCCCTGCTCGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCTTGGGAACTTCTCCATaGCTGCCTGGGGGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVLGTSP*LPGGSR
Trigger: GCGGCTGCCCCCAGGCAGCAATGGAGAAGTTCCCAA...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR CAA 90 bp GAAGGGACGGGAGGGAAGGAGGGTTCACAGCAGAAGGGCTTGGGGCGCCCCGCTAATGTGACAGGAACCTaGGGAACTTCTCCATTGCTG +
Preference number: 5 (lower is better)
Translates to: EGTGGKEGSQQKGLGRPANVTGT*GTSPLL
Trigger: CAGCAATGGAGAAGTTCCCAAGGTTCCTGTCACATT...AGCGGGGCGCCCCAAGCCCTTCTGCTGTGAACCCTCCTTCCCTCCCGTCCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGCTGGTGCAGCGTGAGTaGCTGCTTGTGGCGGAAGCT +
Preference number: 5 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQLVQRE*LLVAEA
Trigger: AGCTTCCGCCACAAGCAGCAACTCACGCTGCACCAG...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS TCA 90 bp GGGACTCTGGAGCAAGGGGTCCATGTCGGTCTCGGGAACTGTGGGTaGGAGAGTCAGCGAGTCTTTCTCAGGAACCTCAGGAGAGTGGAG +
Preference number: 5 (lower is better)
Translates to: GTLEQGVHVGLGNCG*ESQRVFLRNLRRVE
Trigger: CTCCACTCTCCTGAGGTTCCTGAGAAAGACTCGCTGACTCTCTCACCCACAGTTCCCGAGACCGACATGGACCCCTTGCTCCAGAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000147281.2
CDS GCA 90 bp TGCTGTGGCAGCTCGTCCTCCTCTTCCTCTTCCTCCTCCTCCTCCTaGTCCTCTGTCTTGATCACGATCCCCTCCGTGCAGTTTCTCTGC +
Preference number: 5 (lower is better)
Translates to: CCGSSSSSSSSSSSS*SSVLITIPSVQFLC
Trigger: GCAGAGAAACTGCACGGAGGGGATCGTGATCAAGACAGAGGAGCAGGAGGAGGAGGAGGAAGAGGAAGAGGAGGACGAGCTGCCACAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGTTTCCTCTCCACTGCTaGGACAGCAGCCCACACAGC +
Preference number: 5 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQFPLHC*DSSPHS
Trigger: GCTGTGTGGGCTGCTGTCCAAGCAGTGGAGAGGAAA...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp GAGGTACCTGTCCCAGGGGCCTTAGACCCTTGCACCTGGCTGCACATCTGGCCGTGTGTGATCTGGTGCTaGGTCAAGCTTGACTTGTGG +
Preference number: 5 (lower is better)
Translates to: EVPVPGALDPCTWLHIWPCVIWC*VKLDLW
Trigger: CCACAAGTCAAGCTTGACCAAGCACCAGATCACACA...CGGCCAGATGTGCAGCCAGGTGCAAGGGTCTAAGGCCCCTGGGACAGGTACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGAAGGAGACTTCGTGCTaGCCTGCATGCACACGCTGG +
Preference number: 5 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQKETSC*PACTRW
Trigger: CCAGCGTGTGCATGCAGGCAAGCACGAAGTCTCCTT...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS TCA 90 bp CGTCCTCCTCTTCCTCTTCCTCCTCCTCCTCCTGCTCCTCTGTCTTaGTCACGATCCCCTCCGTGCAGTTTCTCTGCTGCACCAGCATCT +
Preference number: 5 (lower is better)
Translates to: RPPLPLPPPPPAPLS*SRSPPCSFSAAPAS
Trigger: AGATGCTGGTGCAGCAGAGAAACTGCACGGAGGGGATCGTGATCAAGACAGAGGAGCAGGAGGAGGAGGAGGAAGAGGAAGAGGAGGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS GCA 90 bp CTCCACTGCTTGGACAGCAGCCCACACAGCCAATCGAGTGATCTCTaGAGTGGGCAGTGGCTGTTCTTTCTGGGCGGCAGAAGAGGTATG +
Preference number: 5 (lower is better)
Translates to: LHCLDSSPHSQSSDL*SGQWLFFLGGRRGM
Trigger: CATACCTCTTCTGCCGCCCAGAAAGAACAGCCACTGCCCACTGCAGAGATCACTCGATTGGCTGTGTGGGCTGCTGTCCAAGCAGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000148362.2
CDS GCA 90 bp CTGGGATCTGTGGGCGTCTCACCCTCCTCAGAATCCTCTTGTTCTTaGATGGCTGGCCTCTCTCCACGCTCCATCTGTGACATGAGGTCC +
Preference number: 5 (lower is better)
Translates to: LGSVGVSPSSESSCS*MAGLSPRSICDMRS
Trigger: GGACCTCATGTCACAGATGGAGCGTGGAGAGAGGCCAGCCATGCAAGAACAAGAGGATTCTGAGGAGGGTGAGACGCCCACAGATCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000148362.2
CDS GCA 90 bp TTGATCACGATCCCCTCCGTGCAGTTTCTCTGCTGCACCAGCATCTaGTTGAGCTCACTGAACTCGCTGGAGCCTTCCGTGGACTCCTCG +
Preference number: 5 (lower is better)
Translates to: LITIPSVQFLCCTSI*LSSLNSLEPSVDSS
Trigger: CGAGGAGTCCACGGAAGGCTCCAGCGAGTTCAGTGAGCTCAAGCAGATGCTGGTGCAGCAGAGAAACTGCACGGAGGGGATCGTGATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS CCA 90 bp TCTGGGCGGCAGAAGAGGTATGGAAGGGAGTGTCCTTTTGCAAAGTaGGACTCTGGAGCAAGGGGTCCATGTCGGTCTCGGGAACTGTGG +
Preference number: 5 (lower is better)
Translates to: SGRQKRYGRECPFAK*DSGARGPCRSRELW
Trigger: CCACAGTTCCCGAGACCGACATGGACCCCTTGCTCCAGAGTCCCACTTTGCAAAAGGACACTCCCTTCCATACCTCTTCTGCCGCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000147281.2
CDS CCA 90 bp GACAGCAGCCCACACAGCCAATCGAGTGATCTCTGCAGTGGGCAGTaGCTGTTCTTTCTGGGCGGCAGAAGAGGTATGGAAGGGAGTGTC +
Preference number: 5 (lower is better)
Translates to: DSSPHSQSSDLCSGQ*LFFLGGRRGMEGSV
Trigger: GACACTCCCTTCCATACCTCTTCTGCCGCCCAGAAAGAACAGCCACTGCCCACTGCAGAGATCACTCGATTGGCTGTGTGGGCTGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000148362.2
CDS-3UTR CAA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCTTTCCTCTCCACTGCTaGGACAGCAGCCCACACAGC +
Preference number: 5 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVFPLHC*DSSPHS
Trigger: GCTGTGTGGGCTGCTGTCCAAGCAGTGGAGAGGAAA...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS GCA 90 bp TGCTCCTCTGTCTTGATCACGATCCCCTCCGTGCAGTTTCTCTGCTaGACCAGCATCTGCTTGAGCTCACTGAACTCGCTGGAGCCTTCC +
Preference number: 5 (lower is better)
Translates to: CSSVLITIPSVQFLC*TSICLSSLNSLEPS
Trigger: GGAAGGCTCCAGCGAGTTCAGTGAGCTCAAGCAGATGCTGGTGCAGCAGAGAAACTGCACGGAGGGGATCGTGATCAAGACAGAGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS GCA 90 bp TCCTGCTCCTCTGTCTTGATCACGATCCCCTCCGTGCAGTTTCTCTaGTGCACCAGCATCTGCTTGAGCTCACTGAACTCGCTGGAGCCT +
Preference number: 5 (lower is better)
Translates to: SCSSVLITIPSVQFL*CTSICLSSLNSLEP
Trigger: AGGCTCCAGCGAGTTCAGTGAGCTCAAGCAGATGCTGGTGCAGCAGAGAAACTGCACGGAGGGGATCGTGATCAAGACAGAGGAGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS CCA 90 bp TCTGCAGTGGGCAGTGGCTGTTCTTTCTGGGCGGCAGAAGAGGTATaGAAGGGAGTGTCCTTTTGCAAAGTGGGACTCTGGAGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: SAVGSGCSFWAAEEV*KGVSFCKVGLWSKG
Trigger: CCCCTTGCTCCAGAGTCCCACTTTGCAAAAGGACACTCCCTTCCATACCTCTTCTGCCGCCCAGAAAGAACAGCCACTGCCCACTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000148362.2
CDS-3UTR CAA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGCTGGTGAGGTGTGTCTaGCTCAGAAGTGGCAGGATA +
Preference number: 5 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQLVRCV*LRSGRI
Trigger: TATCCTGCCACTTCTGAGCAAGACACACCTCACCAG...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGGAAGGGAGTGTCCTTTaGCAAAGTGGGACTCTGGAG +
Preference number: 5 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQEGSVL*QSGTLE
Trigger: CTCCAGAGTCCCACTTTGCAAAAGGACACTCCCTTC...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp CGAGTGGCTGGCAGCCAAATCACTGCCCCCGTGCAGATTGTTTTCATCCATTTTTTGGGAACTTCTCCATaGCTGCCTGGGGGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: RVAGSQITAPVQIVFIHFLGTSP*LPGGSR
Trigger: GCGGCTGCCCCCAGGCAGCAATGGAGAAGTTCCCAA...AAAATGGATGAAAACAATCTGCACGGGGGCAGTGATTTGGCTGCCAGCCACTCG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGCTCCTCAGAATCCTCTaGTTCTTGCATGGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQLLRIL*FLHGWP
Trigger: AGGCCAGCCATGCAAGAACAAGAGGATTCTGAGGAG...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp AAAGTTCTATCCCCGACTAAATGGCCCTGCATCGCGCCTGCGAGTGGCTGGCAGTGCACGCGGCAGTGGTaGGTGAGCTTAGATTTCTCA +
Preference number: 5 (lower is better)
Translates to: KVLSPTKWPCIAPASGWQCTRQW*VSLDFS
Trigger: TGAGAAATCTAAGCTCACCAACCACTGCCGCGTGCA...CTGCCAGCCACTCGCAGGCGCGATGCAGGGCCATTTAGTCGGGGATAGAACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS CCA 90 bp GCAGAAGAGGTATGGAAGGGAGTGTCCTTTTGCAAAGTGGGACTCTaGAGCAAGGGGTCCATGTCGGTCTCGGGAACTGTGGGTGAGAGA +
Preference number: 5 (lower is better)
Translates to: AEEVWKGVSFCKVGL*SKGSMSVSGTVGER
Trigger: TCTCTCACCCACAGTTCCCGAGACCGACATGGACCCCTTGCTCCAGAGTCCCACTTTGCAAAAGGACACTCCCTTCCATACCTCTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000147281.2
CDS-3UTR CAA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCAGAATCCTCTTGTTCTaGCATGGCTGGCCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVRILLF*HGWPLS
Trigger: GGAGAGAGGCCAGCCATGCAAGAACAAGAGGATTCT...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR CAA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCCTCCTCAGAATCCTCTaGTTCTTGCATGGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVLLRIL*FLHGWP
Trigger: AGGCCAGCCATGCAAGAACAAGAGGATTCTGAGGAG...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS-3UTR CAA 90 bp CGAGTGGCTGGCAGCCAAATCACTGCCCCCGTGCAGATTGTTTTCATCCATTTTCTGGTGCAGCGTGAGTaGCTGCTTGTGGCGGAAGCT +
Preference number: 5 (lower is better)
Translates to: RVAGSQITAPVQIVFIHFLVQRE*LLVAEA
Trigger: AGCTTCCGCCACAAGCAGCAACTCACGCTGCACCAG...AAAATGGATGAAAACAATCTGCACGGGGGCAGTGATTTGGCTGCCAGCCACTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS TCA 90 bp ATGCAAGAAGGGAACACAGTTTCTCTAGGGAGTCGAGCAGGGGCCTaGCGCACAGACTCTTCGTGTGGGACACTGGAGAATGACAGTGGT +
Preference number: 5 (lower is better)
Translates to: MQEGNTVSLGSRAGA*RTDSSCGTLENDSG
Trigger: ACCACTGTCATTCTCCAGTGTCCCACACGAAGAGTCTGTGCGTCAGGCCCCTGCTCGACTCCCTAGAGAAACTGTGTTCCCTTCTTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000125385.2
ENSMUST00000147281.2
CDS TCA 90 bp AGACTTCGTGCTTGCCTGCATGCACACGCTGGTGGATCACCAGACTaGTATGCAAGCGGAAGCTCTTCTTGCATTCTGGGCACGTGTAGG +
Preference number: 5 (lower is better)
Translates to: RLRACLHAHAGGSPD*YASGSSSCILGTCR
Trigger: CCTACACGTGCCCAGAATGCAAGAAGAGCTTCCGCTTGCATATCAGTCTGGTGATCCACCAGCGTGTGCATGCAGGCAAGCACGAAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS GCA 90 bp AGTGGCTCTGGTGTCTCCAGACCTTCTGAGCCCTCATCGTTGGTCTaGACCTCGATCTTAATCACGATGCCATCATGTGCAGCACTGGGA +
Preference number: 5 (lower is better)
Translates to: SGSGVSRPSEPSSLV*TSILITMPSCAALG
Trigger: TCCCAGTGCTGCACATGATGGCATCGTGATTAAGATCGAGGTGCAGACCAACGATGAGGGCTCAGAAGGTCTGGAGACACCAGAGCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS GCA 90 bp TTGCCGCACAGACTGCAAATGAAGGAGACTTCGTGCTTGCCTGCATaGACACGCTGGTGGATCACCAGACTGATATGCAAGCGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: LPHRLQMKETSCLPA*TRWWITRLICKRKL
Trigger: GAGCTTCCGCTTGCATATCAGTCTGGTGATCCACCAGCGTGTGCATGCAGGCAAGCACGAAGTCTCCTTCATTTGCAGTCTGTGCGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS GCA 90 bp CGGCTGAAACTCTTGCCGCACAGACTGCAAATGAAGGAGACTTCGTaGTTGCCTGCATGCACACGCTGGTGGATCACCAGACTGATATGC +
Preference number: 5 (lower is better)
Translates to: RLKLLPHRLQMKETS*LPACTRWWITRLIC
Trigger: GCATATCAGTCTGGTGATCCACCAGCGTGTGCATGCAGGCAAGCACGAAGTCTCCTTCATTTGCAGTCTGTGCGGCAAGAGTTTCAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS CCA 90 bp TGTGACATCTGGCTGGATGTCTCTTGCTTAGTAGTACTGTCAGTCTaGGGCAAGACACCTTGCCGGGAGGCAGTGGGAGACAAAGGAGGA +
Preference number: 5 (lower is better)
Translates to: CDIWLDVSCLVVLSV*GKTPCREAVGDKGG
Trigger: TCCTCCTTTGTCTCCCACTGCCTCCCGGCAAGGTGTCTTGCCCCAGACTGACAGTACTACTAAGCAAGAGACATCCAGCCAGATGTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000125385.2
ENSMUST00000147281.2
CDS-3UTR CAA 90 bp CGAGTGGCTGGCAGCCAAATCACTGCCCCCGTGCAGATTGTTTTCATCCATTTTAAGGAGACTTCGTGCTaGCCTGCATGCACACGCTGG +
Preference number: 5 (lower is better)
Translates to: RVAGSQITAPVQIVFIHFKETSC*PACTRW
Trigger: CCAGCGTGTGCATGCAGGCAAGCACGAAGTCTCCTT...AAAATGGATGAAAACAATCTGCACGGGGGCAGTGATTTGGCTGCCAGCCACTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS TCA 90 bp GAAGGAGAGCACTGGGTTTCTTCCTGGGAAGCAAGGGATACCTGGTaGGGTGTGTCTTGCTCAGAAGTGGCAGGATACAGGAGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: EGEHWVSSWEARDTW*GVSCSEVAGYRSEG
Trigger: ACCTTCACTCCTGTATCCTGCCACTTCTGAGCAAGACACACCTCACCAGGTATCCCTTGCTTCCCAGGAAGAAACCCAGTGCTCTCCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000147281.2
CDS GCA 90 bp ACTCTTGCCGCACAGACTGCAAATGAAGGAGACTTCGTGCTTGCCTaGATGCACACGCTGGTGGATCACCAGACTGATATGCAAGCGGAA +
Preference number: 5 (lower is better)
Translates to: TLAAQTANEGDFVLA*MHTLVDHQTDMQAE
Trigger: TTCCGCTTGCATATCAGTCTGGTGATCCACCAGCGTGTGCATGCAGGCAAGCACGAAGTCTCCTTCATTTGCAGTCTGTGCGGCAAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp GGGAAGGTGAGGACACACAGAGCGGTCATGGCACATCCCCAGGTTTCTACAGTCAATGTGACAGGAACCTaGGGAACTTCTCCATTGCTG +
Preference number: 5 (lower is better)
Translates to: GKVRTHRAVMAHPQVSTVNVTGT*GTSPLL
Trigger: CAGCAATGGAGAAGTTCCCAAGGTTCCTGTCACATT...GACTGTAGAAACCTGGGGATGTGCCATGACCGCTCTGTGTGTCCTCACCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148362.2
CDS TCA 90 bp ATCCTCTTGTTCTTGCATGGCTGGCCTCTCTCCACGCTCCATCTGTaGCATGAGGTCCGGTTTGGATATTGCATAGTCCATAGAGACCAG +
Preference number: 5 (lower is better)
Translates to: ILLFLHGWPLSTLHL*HEVRFGYCIVHRDQ
Trigger: CTGGTCTCTATGGACTATGCAATATCCAAACCGGACCTCATGTCACAGATGGAGCGTGGAGAGAGGCCAGCCATGCAAGAACAAGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000148362.2
CDS CCA 90 bp CTGCAAATGAAGGAGACTTCGTGCTTGCCTGCATGCACACGCTGGTaGATCACCAGACTGATATGCAAGCGGAAGCTCTTCTTGCATTCT +
Preference number: 5 (lower is better)
Translates to: LQMKETSCLPACTRW*ITRLICKRKLFLHS
Trigger: AGAATGCAAGAAGAGCTTCCGCTTGCATATCAGTCTGGTGATCCACCAGCGTGTGCATGCAGGCAAGCACGAAGTCTCCTTCATTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS CCA 90 bp AGACTGCAAATGAAGGAGACTTCGTGCTTGCCTGCATGCACACGCTaGTGGATCACCAGACTGATATGCAAGCGGAAGCTCTTCTTGCAT +
Preference number: 5 (lower is better)
Translates to: RLQMKETSCLPACTR*WITRLICKRKLFLH
Trigger: ATGCAAGAAGAGCTTCCGCTTGCATATCAGTCTGGTGATCCACCAGCGTGTGCATGCAGGCAAGCACGAAGTCTCCTTCATTTGCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp CGAGTGGCTGGCAGCCAAATCACTGCCCCCGTGCAGATTGTTTTCATCCATTTTTTCAGCCTAAAGCTTTaGCCACACTCCATGCAAGTG +
Preference number: 5 (lower is better)
Translates to: RVAGSQITAPVQIVFIHFFSLKL*PHSMQV
Trigger: CACTTGCATGGAGTGTGGCAAAAGCTTTAGGCTGAA...AAAATGGATGAAAACAATCTGCACGGGGGCAGTGATTTGGCTGCCAGCCACTCG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp AACCACAGTATCCAAAAGGTAATTAGAAAGTTCTATCCCCGACTAAATGGCCCTTTGGTCAAGCTTGACTaGTGGCTGAAGCTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: NHSIQKVIRKFYPRLNGPLVKLD*WLKLLS
Trigger: TGACAGCAGCTTCAGCCACAAGTCAAGCTTGACCAA...AGGGCCATTTAGTCGGGGATAGAACTTTCTAATTACCTTTTGGATACTGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp AACCACAGTATCCAAAAGGTAATTAGAAAGTTCTATCCCCGACTAAATGGCCCTTGTGTGATCTGGTGCTaGGTCAAGCTTGACTTGTGG +
Preference number: 5 (lower is better)
Translates to: NHSIQKVIRKFYPRLNGPCVIWC*VKLDLW
Trigger: CCACAAGTCAAGCTTGACCAAGCACCAGATCACACA...AGGGCCATTTAGTCGGGGATAGAACTTTCTAATTACCTTTTGGATACTGTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp AACCACAGTATCCAAAAGGTAATTAGAAAGTTCTATCCCCGACTAAATGGCCCTAATGTGACAGGAACCTaGGGAACTTCTCCATTGCTG +
Preference number: 5 (lower is better)
Translates to: NHSIQKVIRKFYPRLNGPNVTGT*GTSPLL
Trigger: CAGCAATGGAGAAGTTCCCAAGGTTCCTGTCACATT...AGGGCCATTTAGTCGGGGATAGAACTTTCTAATTACCTTTTGGATACTGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS-3UTR CAA 90 bp AACCACAGTATCCAAAAGGTAATTAGAAAGTTCTATCCCCGACTAAATGGCCCTTTCAGCCTAAAGCTTTaGCCACACTCCATGCAAGTG +
Preference number: 5 (lower is better)
Translates to: NHSIQKVIRKFYPRLNGPFSLKL*PHSMQV
Trigger: CACTTGCATGGAGTGTGGCAAAAGCTTTAGGCTGAA...AGGGCCATTTAGTCGGGGATAGAACTTTCTAATTACCTTTTGGATACTGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS GCA 72 bp TGCTGCTGGCTAGAGTTCCCACGGTTCTCACCCAGGTaGCGTTCACTGTGCCCGTGCCCGTGCCCATGCCCA +
Preference number: 6 (lower is better)
Translates to: CCWLEFPRFSPR*RSLCPCPCPCP
Trigger: TGGGCATGGGCACGGGCACGGGCACAGTGAACGGCACCTGGGTGAGAACCGTGGGAACTCTAGCCAGCAGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS TCA 72 bp TGCCCGTGCCCGTGCCCATGCCCATGCGTATGCCCATaGATGCTGGGTGCCAGCCTCTTCACTGCTGGGTTG +
Preference number: 6 (lower is better)
Translates to: CPCPCPCPCVCP*MLGASLFTAGL
Trigger: CAACCCAGCAGTGAAGAGGCTGGCACCCAGCATTCATGGGCATACGCATGGGCATGGGCACGGGCACGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS CCA 72 bp GTGAAGGGCCTCTCACCACGCCGATTCCGCTGCTGCTaGCTAGAGTTCCCACGGTTCTCACCCAGGTGCCGT +
Preference number: 6 (lower is better)
Translates to: VKGLSPRRFRCC*LEFPRFSPRCR
Trigger: ACGGCACCTGGGTGAGAACCGTGGGAACTCTAGCCAGCAGCAGCGGAATCGGCGTGGTGAGAGGCCCTTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS TCA 72 bp TTCTCAGGAACCTCAGGAGAGTGGAGTGGAGCTTCCTaGCGGTGGGCGGAGTGCGAGAGGAAGGGGATCCCC +
Preference number: 6 (lower is better)
Translates to: FSGTSGEWSGAS*RWAECERKGIP
Trigger: GGGGATCCCCTTCCTCTCGCACTCCGCCCACCGTCAGGAAGCTCCACTCCACTCTCCTGAGGTTCCTGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000147281.2
CDS GCA 72 bp CAAGTGAAGGGCCTCTCACCACGCCGATTCCGCTGCTaGTGGCTAGAGTTCCCACGGTTCTCACCCAGGTGC +
Preference number: 6 (lower is better)
Translates to: QVKGLSPRRFRC*WLEFPRFSPRC
Trigger: GCACCTGGGTGAGAACCGTGGGAACTCTAGCCAGCAGCAGCGGAATCGGCGTGGTGAGAGGCCCTTCACTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS CCA 72 bp GCCCGTGCCCATGCCCATGCGTATGCCCATGAATGCTaGGTGCCAGCCTCTTCACTGCTGGGTTGCCCAACT +
Preference number: 6 (lower is better)
Translates to: ARAHAHAYAHEC*VPASSLLGCPT
Trigger: AGTTGGGCAACCCAGCAGTGAAGAGGCTGGCACCCAGCATTCATGGGCATACGCATGGGCATGGGCACGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS GCA 72 bp GTGCCCATGCCCATGCGTATGCCCATGAATGCTGGGTaGCAGCCTCTTCACTGCTGGGTTGCCCAACTGCAG +
Preference number: 6 (lower is better)
Translates to: VPMPMRMPMNAG*QPLHCWVAQLQ
Trigger: CTGCAGTTGGGCAACCCAGCAGTGAAGAGGCTGGCACCCAGCATTCATGGGCATACGCATGGGCATGGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS GCA 72 bp ATGCAAGTGAAGGGCCTCTCACCACGCCGATTCCGCTaGTGCTGGCTAGAGTTCCCACGGTTCTCACCCAGG +
Preference number: 6 (lower is better)
Translates to: MQVKGLSPRRFR*CWLEFPRFSPR
Trigger: CCTGGGTGAGAACCGTGGGAACTCTAGCCAGCAGCAGCGGAATCGGCGTGGTGAGAGGCCCTTCACTTGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS CCA 72 bp CCTCCCAGACAGCTGCCCAAGGGATTGCAAGTGCTGTaGCAGCTCGTCCTCCTCTTCCTCTTCCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: PPRQLPKGLQVL*QLVLLFLFLLL
Trigger: GAGGAGGAGGAAGAGGAAGAGGAGGACGAGCTGCCACAGCACTTGCAATCCCTTGGGCAGCTGTCTGGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS GCA 72 bp AGCTCGTCCTCCTCTTCCTCTTCCTCCTCCTCCTCCTaGTCCTCTGTCTTGATCACGATCCCCTCCGTGCAG +
Preference number: 6 (lower is better)
Translates to: SSSSSSSSSSSS*SSVLITIPSVQ
Trigger: CTGCACGGAGGGGATCGTGATCAAGACAGAGGAGCAGGAGGAGGAGGAGGAAGAGGAAGAGGAGGACGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS GCA 72 bp GTCTGGTACATACTGGCCTCGTACCTCCCAGACAGCTaGCCAAGGGATTGCAAGTGCTGTGGCAGCTCGTCC +
Preference number: 6 (lower is better)
Translates to: VWYILASYLPDS*PRDCKCCGSSS
Trigger: GGACGAGCTGCCACAGCACTTGCAATCCCTTGGGCAGCTGTCTGGGAGGTACGAGGCCAGTATGTACCAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS CCA 72 bp CAGGGGCCTGACGCACAGACTCTTCGTGTGGGACACTaGAGAATGACAGTGGTGACGAGCGATCGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: QGPDAQTLRVGH*RMTVVTSDRPP
Trigger: TGGAGGACGATCGCTCGTCACCACTGTCATTCTCCAGTGTCCCACACGAAGAGTCTGTGCGTCAGGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000125385.2
ENSMUST00000147281.2
CDS CAA 72 bp CCCTCCGTGCAGTTTCTCTGCTGCACCAGCATCTGCTaGAGCTCACTGAACTCGCTGGAGCCTTCCGTGGAC +
Preference number: 6 (lower is better)
Translates to: PSVQFLCCTSIC*SSLNSLEPSVD
Trigger: GTCCACGGAAGGCTCCAGCGAGTTCAGTGAGCTCAAGCAGATGCTGGTGCAGCAGAGAAACTGCACGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS CAA 90 bp ATCACGATCCCCTCCGTGCAGTTTCTCTGCTGCACCAGCATCTGCTaGAGCTCACTGAACTCGCTGGAGCCTTCCGTGGACTCCTCGAGC +
Preference number: 6 (lower is better)
Translates to: ITIPSVQFLCCTSIC*SSLNSLEPSVDSSS
Trigger: GCTCGAGGAGTCCACGGAAGGCTCCAGCGAGTTCAGTGAGCTCAAGCAGATGCTGGTGCAGCAGAGAAACTGCACGGAGGGGATCGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS CAA 90 bp TCGTCCTCCTCTTCCTCTTCCTCCTCCTCCTCCTGCTCCTCTGTCTaGATCACGATCCCCTCCGTGCAGTTTCTCTGCTGCACCAGCATC +
Preference number: 6 (lower is better)
Translates to: SSSSSSSSSSSCSSV*ITIPSVQFLCCTSI
Trigger: GATGCTGGTGCAGCAGAGAAACTGCACGGAGGGGATCGTGATCAAGACAGAGGAGCAGGAGGAGGAGGAGGAAGAGGAAGAGGAGGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS TCA 72 bp GAGCAAGGGGTCCATGTCGGTCTCGGGAACTGTGGGTaGGAGAGTCAGCGAGTCTTTCTCAGGAACCTCAGG +
Preference number: 6 (lower is better)
Translates to: EQGVHVGLGNCG*ESQRVFLRNLR
Trigger: CCTGAGGTTCCTGAGAAAGACTCGCTGACTCTCTCACCCACAGTTCCCGAGACCGACATGGACCCCTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000147281.2
CDS TCA 72 bp CCACTGCTTGGACAGCAGCCCACACAGCCAATCGAGTaGTCTCTGCAGTGGGCAGTGGCTGTTCTTTCTGGG +
Preference number: 6 (lower is better)
Translates to: PLLGQQPTQPIE*SLQWAVAVLSG
Trigger: CCCAGAAAGAACAGCCACTGCCCACTGCAGAGATCACTCGATTGGCTGTGTGGGCTGCTGTCCAAGCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000148362.2
CDS GCA 72 bp GTGGGCGTCTCACCCTCCTCAGAATCCTCTTGTTCTTaGATGGCTGGCCTCTCTCCACGCTCCATCTGTGAC +
Preference number: 6 (lower is better)
Translates to: VGVSPSSESSCS*MAGLSPRSICD
Trigger: GTCACAGATGGAGCGTGGAGAGAGGCCAGCCATGCAAGAACAAGAGGATTCTGAGGAGGGTGAGACGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000148362.2
CDS GCA 72 bp ATCCCCTCCGTGCAGTTTCTCTGCTGCACCAGCATCTaGTTGAGCTCACTGAACTCGCTGGAGCCTTCCGTG +
Preference number: 6 (lower is better)
Translates to: IPSVQFLCCTSI*LSSLNSLEPSV
Trigger: CACGGAAGGCTCCAGCGAGTTCAGTGAGCTCAAGCAGATGCTGGTGCAGCAGAGAAACTGCACGGAGGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS TCA 72 bp GGGAACACAGTTTCTCTAGGGAGTCGAGCAGGGGCCTaGCGCACAGACTCTTCGTGTGGGACACTGGAGAAT +
Preference number: 6 (lower is better)
Translates to: GNTVSLGSRAGA*RTDSSCGTLEN
Trigger: ATTCTCCAGTGTCCCACACGAAGAGTCTGTGCGTCAGGCCCCTGCTCGACTCCCTAGAGAAACTGTGTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000125385.2
ENSMUST00000147281.2
CDS TCA 72 bp CTTCCTCTTCCTCCTCCTCCTCCTGCTCCTCTGTCTTaGTCACGATCCCCTCCGTGCAGTTTCTCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: LPLPPPPPAPLS*SRSPPCSFSAA
Trigger: TGCAGCAGAGAAACTGCACGGAGGGGATCGTGATCAAGACAGAGGAGCAGGAGGAGGAGGAGGAAGAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS CCA 72 bp TGGCTGGATGTCTCTTGCTTAGTAGTACTGTCAGTCTaGGGCAAGACACCTTGCCGGGAGGCAGTGGGAGAC +
Preference number: 6 (lower is better)
Translates to: WLDVSCLVVLSV*GKTPCREAVGD
Trigger: GTCTCCCACTGCCTCCCGGCAAGGTGTCTTGCCCCAGACTGACAGTACTACTAAGCAAGAGACATCCAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000125385.2
ENSMUST00000147281.2
CDS CAA 72 bp TCTTCCTCTTCCTCCTCCTCCTCCTGCTCCTCTGTCTaGATCACGATCCCCTCCGTGCAGTTTCTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SSSSSSSSCSSV*ITIPSVQFLCC
Trigger: GCAGCAGAGAAACTGCACGGAGGGGATCGTGATCAAGACAGAGGAGCAGGAGGAGGAGGAGGAAGAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS TCA 72 bp GCTTGCCTGCATGCACACGCTGGTGGATCACCAGACTaGTATGCAAGCGGAAGCTCTTCTTGCATTCTGGGC +
Preference number: 6 (lower is better)
Translates to: ACLHAHAGGSPD*YASGSSSCILG
Trigger: GCCCAGAATGCAAGAAGAGCTTCCGCTTGCATATCAGTCTGGTGATCCACCAGCGTGTGCATGCAGGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS GCA 72 bp GTCTTGATCACGATCCCCTCCGTGCAGTTTCTCTGCTaGACCAGCATCTGCTTGAGCTCACTGAACTCGCTG +
Preference number: 6 (lower is better)
Translates to: VLITIPSVQFLC*TSICLSSLNSL
Trigger: CAGCGAGTTCAGTGAGCTCAAGCAGATGCTGGTGCAGCAGAGAAACTGCACGGAGGGGATCGTGATCAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS GCA 72 bp CTCTTGCCGCACAGACTGCAAATGAAGGAGACTTCGTaGTTGCCTGCATGCACACGCTGGTGGATCACCAGA +
Preference number: 6 (lower is better)
Translates to: LLPHRLQMKETS*LPACTRWWITR
Trigger: TCTGGTGATCCACCAGCGTGTGCATGCAGGCAAGCACGAAGTCTCCTTCATTTGCAGTCTGTGCGGCAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS CCA 72 bp CAGAAGAGGTATGGAAGGGAGTGTCCTTTTGCAAAGTaGGACTCTGGAGCAAGGGGTCCATGTCGGTCTCGG +
Preference number: 6 (lower is better)
Translates to: QKRYGRECPFAK*DSGARGPCRSR
Trigger: CCGAGACCGACATGGACCCCTTGCTCCAGAGTCCCACTTTGCAAAAGGACACTCCCTTCCATACCTCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000147281.2
CDS CCA 72 bp GGCAGTGGCTGTTCTTTCTGGGCGGCAGAAGAGGTATaGAAGGGAGTGTCCTTTTGCAAAGTGGGACTCTGG +
Preference number: 6 (lower is better)
Translates to: GSGCSFWAAEEV*KGVSFCKVGLW
Trigger: CCAGAGTCCCACTTTGCAAAAGGACACTCCCTTCCATACCTCTTCTGCCGCCCAGAAAGAACAGCCACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000148362.2
CDS CCA 72 bp CCACACAGCCAATCGAGTGATCTCTGCAGTGGGCAGTaGCTGTTCTTTCTGGGCGGCAGAAGAGGTATGGAA +
Preference number: 6 (lower is better)
Translates to: PHSQSSDLCSGQ*LFFLGGRRGME
Trigger: TTCCATACCTCTTCTGCCGCCCAGAAAGAACAGCCACTGCCCACTGCAGAGATCACTCGATTGGCTGTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000148362.2
CDS CAA 72 bp TTGCCGCACAGACTGCAAATGAAGGAGACTTCGTGCTaGCCTGCATGCACACGCTGGTGGATCACCAGACTG +
Preference number: 6 (lower is better)
Translates to: LPHRLQMKETSC*PACTRWWITRL
Trigger: CAGTCTGGTGATCCACCAGCGTGTGCATGCAGGCAAGCACGAAGTCTCCTTCATTTGCAGTCTGTGCGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS CAA 90 bp CCCATCAGTGGCTCTGGTGTCTCCAGACCTTCTGAGCCCTCATCGTaGGTCTGCACCTCGATCTTAATCACGATGCCATCATGTGCAGCA +
Preference number: 6 (lower is better)
Translates to: PISGSGVSRPSEPSS*VCTSILITMPSCAA
Trigger: TGCTGCACATGATGGCATCGTGATTAAGATCGAGGTGCAGACCAACGATGAGGGCTCAGAAGGTCTGGAGACACCAGAGCCACTGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS TCA 72 bp CACTGGGTTTCTTCCTGGGAAGCAAGGGATACCTGGTaGGGTGTGTCTTGCTCAGAAGTGGCAGGATACAGG +
Preference number: 6 (lower is better)
Translates to: HWVSSWEARDTW*GVSCSEVAGYR
Trigger: CCTGTATCCTGCCACTTCTGAGCAAGACACACCTCACCAGGTATCCCTTGCTTCCCAGGAAGAAACCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000147281.2
CDS GCA 72 bp TCTGTCTTGATCACGATCCCCTCCGTGCAGTTTCTCTaGTGCACCAGCATCTGCTTGAGCTCACTGAACTCG +
Preference number: 6 (lower is better)
Translates to: SVLITIPSVQFL*CTSICLSSLNS
Trigger: CGAGTTCAGTGAGCTCAAGCAGATGCTGGTGCAGCAGAGAAACTGCACGGAGGGGATCGTGATCAAGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS CCA 72 bp AAGGAGACTTCGTGCTTGCCTGCATGCACACGCTGGTaGATCACCAGACTGATATGCAAGCGGAAGCTCTTC +
Preference number: 6 (lower is better)
Translates to: KETSCLPACTRW*ITRLICKRKLF
Trigger: GAAGAGCTTCCGCTTGCATATCAGTCTGGTGATCCACCAGCGTGTGCATGCAGGCAAGCACGAAGTCTCCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS CCA 72 bp ATGAAGGAGACTTCGTGCTTGCCTGCATGCACACGCTaGTGGATCACCAGACTGATATGCAAGCGGAAGCTC +
Preference number: 6 (lower is better)
Translates to: MKETSCLPACTR*WITRLICKRKL
Trigger: GAGCTTCCGCTTGCATATCAGTCTGGTGATCCACCAGCGTGTGCATGCAGGCAAGCACGAAGTCTCCTTCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS CAA 72 bp GGCTCTGGTGTCTCCAGACCTTCTGAGCCCTCATCGTaGGTCTGCACCTCGATCTTAATCACGATGCCATCA +
Preference number: 6 (lower is better)
Translates to: GSGVSRPSEPSS*VCTSILITMPS
Trigger: TGATGGCATCGTGATTAAGATCGAGGTGCAGACCAACGATGAGGGCTCAGAAGGTCTGGAGACACCAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS GCA 72 bp GGTGTCTCCAGACCTTCTGAGCCCTCATCGTTGGTCTaGACCTCGATCTTAATCACGATGCCATCATGTGCA +
Preference number: 6 (lower is better)
Translates to: GVSRPSEPSSLV*TSILITMPSCA
Trigger: TGCACATGATGGCATCGTGATTAAGATCGAGGTGCAGACCAACGATGAGGGCTCAGAAGGTCTGGAGACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS GCA 72 bp GCACAGACTGCAAATGAAGGAGACTTCGTGCTTGCCTaGATGCACACGCTGGTGGATCACCAGACTGATATG +
Preference number: 6 (lower is better)
Translates to: AQTANEGDFVLA*MHTLVDHQTDM
Trigger: CATATCAGTCTGGTGATCCACCAGCGTGTGCATGCAGGCAAGCACGAAGTCTCCTTCATTTGCAGTCTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS CAA 90 bp CTGAAACTCTTGCCGCACAGACTGCAAATGAAGGAGACTTCGTGCTaGCCTGCATGCACACGCTGGTGGATCACCAGACTGATATGCAAG +
Preference number: 6 (lower is better)
Translates to: LKLLPHRLQMKETSC*PACTRWWITRLICK
Trigger: CTTGCATATCAGTCTGGTGATCCACCAGCGTGTGCATGCAGGCAAGCACGAAGTCTCCTTCATTTGCAGTCTGTGCGGCAAGAGTTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
CDS TCA 72 bp TTCTTGCATGGCTGGCCTCTCTCCACGCTCCATCTGTaGCATGAGGTCCGGTTTGGATATTGCATAGTCCAT +
Preference number: 6 (lower is better)
Translates to: FLHGWPLSTLHL*HEVRFGYCIVH
Trigger: ATGGACTATGCAATATCCAAACCGGACCTCATGTCACAGATGGAGCGTGGAGAGAGGCCAGCCATGCAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8
ENSMUST00000148362.2
CDS GCA 72 bp AGACTGCAAATGAAGGAGACTTCGTGCTTGCCTGCATaGACACGCTGGTGGATCACCAGACTGATATGCAAG +
Preference number: 6 (lower is better)
Translates to: RLQMKETSCLPA*TRWWITRLICK
Trigger: CTTGCATATCAGTCTGGTGATCCACCAGCGTGTGCATGCAGGCAAGCACGAAGTCTCCTTCATTTGCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095944.10
ENSMUST00000114583.8