Pregenerated sensors for ZFP772 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066838Ensembl transcript IDs: ENSMUST00000074455.9
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCAGCCAGGAAGAGACTCTCCCACACTGGGTGGAGCTTGAGCATTaGACCTCAAAGCCCATCCCCACAGTGACACACTTTCTCCAACAA | + |
|
Preference number: 1 (lower is better) Translates to: GSQEETLPHWVELEH*TSKPIPTVTHFLQQ Trigger: TTGTTGGAGAAAGTGTGTCACTGTGGGGATGGGCTTTGAGGTCCAATGCTCAAGCTCCACCCAGTGTGGGAGAGTCTCTTCCTGGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR TCA 90 bp | TGCATGCAGGCAGACATGGTGAAGAAGAGCAGAGGTTCTATAACCTaGTGTGAAGGCAGCCAGGAAGAGACTCTCCCACACTGGGTGGAG | + |
|
Preference number: 1 (lower is better) Translates to: CMQADMVKKSRGSIT*CEGSQEETLPHWVE Trigger: CTCCACCCAGTGTGGGAGAGTCTCTTCCTGGCTGCCTTCACATCAGGTTATAGAACCTCTGCTCTTCTTCACCATGTCTGCCTGCATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR CCA 90 bp | TGCTCAAAGTCACATTCACTCCTAAGGCTCAACAAGCTTGGTCAATaGCTGAAGCTTTCTCTATGTTTGCATTCACAAACCTATCTGGGT | + |
|
Preference number: 1 (lower is better) Translates to: CSKSHSLLRLNKLGQ*LKLSLCLHSQTYLG Trigger: ACCCAGATAGGTTTGTGAATGCAAACATAGAGAAAGCTTCAGCCATTGACCAAGCTTGTTGAGCCTTAGGAGTGAATGTGACTTTGAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR CCA 90 bp | ACTTTTCTGCTCAAAGTCACATTCACTCCTAAGGCTCAACAAGCTTaGTCAATGGCTGAAGCTTTCTCTATGTTTGCATTCACAAACCTA | + |
|
Preference number: 1 (lower is better) Translates to: TFLLKVTFTPKAQQA*SMAEAFSMFAFTNL Trigger: TAGGTTTGTGAATGCAAACATAGAGAAAGCTTCAGCCATTGACCAAGCTTGTTGAGCCTTAGGAGTGAATGTGACTTTGAGCAGAAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR-3UTR TCA 90 bp | GGAGACTCCATTCCACACTGGTGCAGCCAAGAACACAGCTTCCTCTTGCTAAGTTGCAGGCAGACATGGTaGAGAAGAGCAGAGGTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: GDSIPHWCSQEHSFLLLSCRQTW*RRAEVL Trigger: TAGAACCTCTGCTCTTCTTCACCATGTCTGCCTGCA...ACTTAGCAAGAGGAAGCTGTGTTCTTGGCTGCACCAGTGTGGAATGGAGTCTCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR-3UTR CCA 90 bp | GGAGACTCCATTCCACACTGGTGCAGCCAAGAACACAGCTTCCTCTTGCTAAGTCTCCCCCAGATTCAGTaGGTTCATGATGCATCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: GDSIPHWCSQEHSFLLLSLPQIQ*VHDASL Trigger: CAGAGATGCATCATGAACCCACTGAATCTGGGGGAG...ACTTAGCAAGAGGAAGCTGTGTTCTTGGCTGCACCAGTGTGGAATGGAGTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR-3UTR CCA 90 bp | CTCTTCCTCCCCCATTCAAAGTCAGTAACATGGAGACTCCATTCCACACTGGTGAAGGCTCAACAAGCTTaGTCAATGGCTGAAGCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LFLPHSKSVTWRLHSTLVKAQQA*SMAEAF Trigger: GAAAGCTTCAGCCATTGACCAAGCTTGTTGAGCCTT...CACCAGTGTGGAATGGAGTCTCCATGTTACTGACTTTGAATGGGGGAGGAAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR-3UTR GCA 90 bp | CATAAAAGCCTTTCCTCTACTATGAACCTGTTGGTCTTTGATGAGGTGAGTTTTGGCAGGAACCATGGCTaGATGCAGGCAGACATGGTG | + |
|
Preference number: 2 (lower is better) Translates to: HKSLSSTMNLLVFDEVSFGRNHG*MQADMV Trigger: CACCATGTCTGCCTGCATGCAGCCATGGTTCCTGCC...AAAACTCACCTCATCAAAGACCAACAGGTTCATAGTAGAGGAAAGGCTTTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR-3UTR GCA 90 bp | GGAGACTCCATTCCACACTGGTGCAGCCAAGAACACAGCTTCCTCTTGCTAAGTCTCTCAGAACTTTTCTaGTCAAAGTCACATTCACTC | + |
|
Preference number: 2 (lower is better) Translates to: GDSIPHWCSQEHSFLLLSLSELF*SKSHSL Trigger: GAGTGAATGTGACTTTGAGCAGAAAAGTTCTGAGAG...ACTTAGCAAGAGGAAGCTGTGTTCTTGGCTGCACCAGTGTGGAATGGAGTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTTGTGTCTGTGTTGCTAATAAGAGCATAGTTTGTTCAAAGTCTCCCCCAGATTCTTGGCAGGAACCATaGCTGCATGCAGGCAGACAT | + |
|
Preference number: 2 (lower is better) Translates to: GCVCVANKSIVCSKSPPDSWQEP*LHAGRH Trigger: ATGTCTGCCTGCATGCAGCCATGGTTCCTGCCAAGA...ATCTGGGGGAGACTTTGAACAAACTATGCTCTTATTAGCAACACAGACACAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTCCTCCCCCATTCAAAGTCAGTAACATGGAGACTCCATTCCACACTGGTGCAAAGCATTCAAACACATaGATCTATAGGGCCAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: LPPPFKVSNMETPFHTGAKHSNT*IYRAKP Trigger: AGGTTTGGCCCTATAGATTCATGTGTTTGAATGCTT...TGCACCAGTGTGGAATGGAGTCTCCATGTTACTGACTTTGAATGGGGGAGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR-3UTR TCA 90 bp | TCACAAACCTATCTGGGTTGTGTCTGTGTTGCTAATAAGAGCATAGTTTGTTCAACACTGGGTGGAGCTTaGGCATTGGACCTCAAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: SQTYLGCVCVANKSIVCSTLGGA*ALDLKA Trigger: GGCTTTGAGGTCCAATGCTCAAGCTCCACCCAGTGT...TGAACAAACTATGCTCTTATTAGCAACACAGACACAACCCAGATAGGTTTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR-3UTR TCA 90 bp | CCACGCCCTACACATAAAAGCCTTTCCTCTACTATGAACCTGTTGGTCTTTGATAGAGGTTCTATAACCTaGTGTGAAGGCAGCCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: PRPTHKSLSSTMNLLVFDRGSIT*CEGSQE Trigger: TTCCTGGCTGCCTTCACATCAGGTTATAGAACCTCT...ATCAAAGACCAACAGGTTCATAGTAGAGGAAAGGCTTTTATGTGTAGGGCGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR-3UTR GCA 90 bp | GGAGACTCCATTCCACACTGGTGCAGCCAAGAACACAGCTTCCTCTTGCTAAGTCTCATGATGCTTTGCTaGATAAAATCCCTGATGTTA | + |
|
Preference number: 2 (lower is better) Translates to: GDSIPHWCSQEHSFLLLSLMMLC*IKSLML Trigger: TAACATCAGGGATTTTATGCAGCAAAGCATCATGAG...ACTTAGCAAGAGGAAGCTGTGTTCTTGGCTGCACCAGTGTGGAATGGAGTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR-3UTR TCA 90 bp | TCACAAACCTATCTGGGTTGTGTCTGTGTTGCTAATAAGAGCATAGTTTGTTCAAGCCCATCCCCACAGTaGCACACTTTCTCCAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: SQTYLGCVCVANKSIVCSSPSPQ*HTFSNK Trigger: CTTGTTGGAGAAAGTGTGTCACTGTGGGGATGGGCT...TGAACAAACTATGCTCTTATTAGCAACACAGACACAACCCAGATAGGTTTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTCCTCCCCCATTCAAAGTCAGTAACATGGAGACTCCATTCCACACTGGTGCAAGCACTTTTGTCCAGTaGATATCCTTTTGTGTAGAT | + |
|
Preference number: 2 (lower is better) Translates to: LPPPFKVSNMETPFHTGASTFVQ*ISFCVD Trigger: ATCTACACAAAAGGATATTCACTGGACAAAAGTGCT...TGCACCAGTGTGGAATGGAGTCTCCATGTTACTGACTTTGAATGGGGGAGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR-3UTR TCA 90 bp | GGTTGTGTCTGTGTTGCTAATAAGAGCATAGTTTGTTCAAAGTCTCCCCCAGATGCCTTTCCTCTACTATaGACCTGTTGGTCTTTGATG | + |
|
Preference number: 2 (lower is better) Translates to: GCVCVANKSIVCSKSPPDAFPLL*TCWSLM Trigger: CATCAAAGACCAACAGGTTCATAGTAGAGGAAAGGC...ATCTGGGGGAGACTTTGAACAAACTATGCTCTTATTAGCAACACAGACACAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR CAA 90 bp | CTAAGGCTCAACAAGCTTGGTCAATGGCTGAAGCTTTCTCTATGTTaGCATTCACAAACCTATCTGGGTTGTGTCTGTGTTGCTAATAAG | + |
|
Preference number: 2 (lower is better) Translates to: LRLNKLGQWLKLSLC*HSQTYLGCVCVANK Trigger: CTTATTAGCAACACAGACACAACCCAGATAGGTTTGTGAATGCAAACATAGAGAAAGCTTCAGCCATTGACCAAGCTTGTTGAGCCTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR-3UTR TCA 90 bp | CATAAAAGCCTTTCCTCTACTATGAACCTGTTGGTCTTTGATGAGGTGAGTTTTTTCTATAACCTGATGTaGAGGCAGCCAGGAAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: HKSLSSTMNLLVFDEVSFFYNLM*RQPGRD Trigger: GTCTCTTCCTGGCTGCCTTCACATCAGGTTATAGAA...AAAACTCACCTCATCAAAGACCAACAGGTTCATAGTAGAGGAAAGGCTTTTATG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTTGTGTCTGTGTTGCTAATAAGAGCATAGTTTGTTCAAAGTCTCCCCCAGATTGCATCTCTGCACTATaGCCTCTTAGGTTAAATATG | + |
|
Preference number: 2 (lower is better) Translates to: GCVCVANKSIVCSKSPPDCISAL*PLRLNM Trigger: CATATTTAACCTAAGAGGCCATAGTGCAGAGATGCA...ATCTGGGGGAGACTTTGAACAAACTATGCTCTTATTAGCAACACAGACACAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR-3UTR CCA 90 bp | CCTCTTGCTAAGTCCCCAGAAAGCATTAACTTCTTAGGAATAAGAAGATGGCACGTAATTTTCAATGACTaGCTTCCTCACAAAAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: PLAKSPESINFLGIRRWHVIFND*LPHKSH Trigger: GTGACTTTTGTGAGGAAGCCAGTCATTGAAAATTAC...GTGCCATCTTCTTATTCCTAAGAAGTTAATGCTTTCTGGGGACTTAGCAAGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR CCA 72 bp | GTGAAGGCAGCCAGGAAGAGACTCTCCCACACTGGGTaGAGCTTGAGCATTGGACCTCAAAGCCCATCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: VKAARKRLSHTG*SLSIGPQSPSP Trigger: TGGGGATGGGCTTTGAGGTCCAATGCTCAAGCTCCACCCAGTGTGGGAGAGTCTCTTCCTGGCTGCCTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR TCA 72 bp | CATGGTGAAGAAGAGCAGAGGTTCTATAACCTGATGTaGAGGCAGCCAGGAAGAGACTCTCCCACACTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: HGEEEQRFYNLM*RQPGRDSPTLG Trigger: ACCCAGTGTGGGAGAGTCTCTTCCTGGCTGCCTTCACATCAGGTTATAGAACCTCTGCTCTTCTTCACCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR GCA 72 bp | AGGTCAGTCCATTATCATCTTGGCAGGAACCATGGCTaGATGCAGGCAGACATGGTGAAGAAGAGCAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RSVHYHLGRNHG*MQADMVKKSRG Trigger: ACCTCTGCTCTTCTTCACCATGTCTGCCTGCATGCAGCCATGGTTCCTGCCAAGATGATAATGGACTGACCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR CCA 72 bp | CAGAAGGTCAGTCCATTATCATCTTGGCAGGAACCATaGCTGCATGCAGGCAGACATGGTGAAGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QKVSPLSSWQEP*LHAGRHGEEEQ Trigger: CTGCTCTTCTTCACCATGTCTGCCTGCATGCAGCCATGGTTCCTGCCAAGATGATAATGGACTGACCTTCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR CCA 72 bp | GGCTTACAGTTTCAGAAGGTCAGTCCATTATCATCTTaGCAGGAACCATGGCTGCATGCAGGCAGACATGGT | + |
|
Preference number: 3 (lower is better) Translates to: GLQFQKVSPLSS*QEPWLHAGRHG Trigger: ACCATGTCTGCCTGCATGCAGCCATGGTTCCTGCCAAGATGATAATGGACTGACCTTCTGAAACTGTAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR CCA 72 bp | GTCACTCTCTTCCTCCCCCATTCAAAGTCAGTAACATaGAGACTCCATTCCACACTGGTGCAGCCAAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: VTLFLPHSKSVT*RLHSTLVQPRT Trigger: TGTTCTTGGCTGCACCAGTGTGGAATGGAGTCTCCATGTTACTGACTTTGAATGGGGGAGGAAGAGAGTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGACTCCATTCCACACTGGTGCAGCCAAGAACACAGCTTCCTCTTGCTAAGTTGCACTCATGATGCTTaGCTGCATAAAATCCCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: GDSIPHWCSQEHSFLLLSCTHDA*LHKIPD Trigger: ATCAGGGATTTTATGCAGCAAAGCATCATGAGTGCA...ACTTAGCAAGAGGAAGCTGTGTTCTTGGCTGCACCAGTGTGGAATGGAGTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR TCA 72 bp | GTTTGTTCAAAGTCTCCCCCAGATTCAGTGGGTTCATaGTGCATCTCTGCACTATGGCCTCTTAGGTTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: VCSKSPPDSVGS*CISALWPLRLN Trigger: ATTTAACCTAAGAGGCCATAGTGCAGAGATGCATCATGAACCCACTGAATCTGGGGGAGACTTTGAACAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR GCA 72 bp | CTGGCTTCCTCACAAAAGTCACTCTCAGAACTTTTCTaGTCAAAGTCACATTCACTCCTAAGGCTCAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: LASSQKSLSELF*SKSHSLLRLNK Trigger: CTTGTTGAGCCTTAGGAGTGAATGTGACTTTGAGCAGAAAAGTTCTGAGAGTGACTTTTGTGAGGAAGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR-3UTR CAA 90 bp | CATAAAAGCCTTTCCTCTACTATGAACCTGTTGGTCTTTGATGAGGTGAGTTTTCAGTCCATTATCATCTaGGCAGGAACCATGGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: HKSLSSTMNLLVFDEVSFQSIII*AGTMAA Trigger: TGCAGCCATGGTTCCTGCCAAGATGATAATGGACTG...AAAACTCACCTCATCAAAGACCAACAGGTTCATAGTAGAGGAAAGGCTTTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR CCA 72 bp | TCACATTCACTCCTAAGGCTCAACAAGCTTGGTCAATaGCTGAAGCTTTCTCTATGTTTGCATTCACAAACC | + |
|
Preference number: 3 (lower is better) Translates to: SHSLLRLNKLGQ*LKLSLCLHSQT Trigger: GGTTTGTGAATGCAAACATAGAGAAAGCTTCAGCCATTGACCAAGCTTGTTGAGCCTTAGGAGTGAATGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR CCA 72 bp | CTCAAAGTCACATTCACTCCTAAGGCTCAACAAGCTTaGTCAATGGCTGAAGCTTTCTCTATGTTTGCATTC | + |
|
Preference number: 3 (lower is better) Translates to: LKVTFTPKAQQA*SMAEAFSMFAF Trigger: GAATGCAAACATAGAGAAAGCTTCAGCCATTGACCAAGCTTGTTGAGCCTTAGGAGTGAATGTGACTTTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR TCA 72 bp | CTTGATCCATGTTCTTCTTTGATGAGTAATTTTCAATaGCTGGCTTCCTCACAAAAGTCACTCTCAGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: LDPCSSLMSNFQ*LASSQKSLSEL Trigger: AAGTTCTGAGAGTGACTTTTGTGAGGAAGCCAGTCATTGAAAATTACTCATCAAAGAAGAACATGGATCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR TCA 72 bp | AACAAACAACAATCAAAATATATGTCTTATTTAAACTaGGGTCACTCTCTTCCTCCCCCATTCAAAGTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: NKQQSKYMSYLN*GHSLPPPFKVS Trigger: ACTGACTTTGAATGGGGGAGGAAGAGAGTGACCTCAGTTTAAATAAGACATATATTTTGATTGTTGTTTGTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR TCA 90 bp | GTGGAGCTTGAGCATTGGACCTCAAAGCCCATCCCCACAGTGACACACTTTCTCGAAAGGCTTTTTGGCTaGAGGACTTGCCACACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: VELEHWTSKPIPTVTHFLERLFG*RTCHTR Trigger: GCGAGTGTGGCAAGTCCTTCAGCCAAAAAGCCTTTC...GAGAAAGTGTGTCACTGTGGGGATGGGCTTTGAGGTCCAATGCTCAAGCTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR TCA 90 bp | GTGGAGCTTGAGCATTGGACCTCAAAGCCCATCCCCACAGTGACACACTTTCTCGGGAGATATTATGCTTaGAGGCTTTGCCACACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VELEHWTSKPIPTVTHFLGRYYA*RLCHTP Trigger: GGGAGTGTGGCAAAGCCTTCAAGCATAATATCTCCC...GAGAAAGTGTGTCACTGTGGGGATGGGCTTTGAGGTCCAATGCTCAAGCTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR TCA 90 bp | GTGGAGCTTGAGCATTGGACCTCAAAGCCCATCCCCACAGTGACACACTTTCTCGGAAGCAGTTGTGCTTaGAGGTTTTGCCACACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VELEHWTSKPIPTVTHFLGSSCA*RFCHTH Trigger: GTGAGTGTGGCAAAACCTTCAAGCACAACTGCTTCC...GAGAAAGTGTGTCACTGTGGGGATGGGCTTTGAGGTCCAATGCTCAAGCTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR CCA 90 bp | GGTTGTGTCTGTGTTGCTAATAAGAGCATAGTTTGTTCAAAGTCTCCCCCAGATACCATTGGGCTCCACTaGCCAGCCGGGCCCTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GCVCVANKSIVCSKSPPDTIGLH*PAGPWD Trigger: ATCCCAGGGCCCGGCTGGCCAGTGGAGCCCAATGGT...ATCTGGGGGAGACTTTGAACAAACTATGCTCTTATTAGCAACACAGACACAACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR CCA 90 bp | GGAGACTCCATTCCACACTGGTGCAGCCAAGAACACAGCTTCCTCTTGCTAAGTGGTTTCACTGAATACTaGGAAACCTGGGGCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GDSIPHWCSQEHSFLLLSGFTEY*ETWGRA Trigger: AGCCCTGCCCCAGGTTTCCCAGTATTCAGTGAAACC...ACTTAGCAAGAGGAAGCTGTGTTCTTGGCTGCACCAGTGTGGAATGGAGTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR CCA 90 bp | GGAGACTCCATTCCACACTGGTGCAGCCAAGAACACAGCTTCCTCTTGCTAAGTCTCCCCACACCTGAATaGCTTCTCTCCGGTGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GDSIPHWCSQEHSFLLLSLPTPE*LLSGVN Trigger: ATTCACACCGGAGAGAAGCCATTCAGGTGTGGGGAG...ACTTAGCAAGAGGAAGCTGTGTTCTTGGCTGCACCAGTGTGGAATGGAGTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR GCA 90 bp | GTGGAGCTTGAGCATTGGACCTCAAAGCCCATCCCCACAGTGACACACTTTCTCACGAGGGAGATATTATaGTTGAAGGCTTTGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VELEHWTSKPIPTVTHFLTREIL*LKALPH Trigger: GTGTGGCAAAGCCTTCAAGCATAATATCTCCCTCGT...GAGAAAGTGTGTCACTGTGGGGATGGGCTTTGAGGTCCAATGCTCAAGCTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR CCA 90 bp | CTTCCTCACAAAAGTCACTCTCAGAACTTTTCTGCTCAAAGTCACATTCACTCCCTCCACAATCACCATTaGGCTCCACTGGCCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LPHKSHSQNFSAQSHIHSLHNHH*APLASR Trigger: CCGGCTGGCCAGTGGAGCCCAATGGTGATTGTGGAG...GGAGTGAATGTGACTTTGAGCAGAAAAGTTCTGAGAGTGACTTTTGTGAGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR CCA 90 bp | GGAGACTCCATTCCACACTGGTGCAGCCAAGAACACAGCTTCCTCTTGCTAAGTCACTCTCCATGTTCATaGGGGCATCCCCAACATTAT | + |
|
Preference number: 4 (lower is better) Translates to: GDSIPHWCSQEHSFLLLSHSPCS*GHPQHY Trigger: ATAATGTTGGGGATGCCCCCATGAACATGGAGAGTG...ACTTAGCAAGAGGAAGCTGTGTTCTTGGCTGCACCAGTGTGGAATGGAGTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR CCA 90 bp | GTGGAGCTTGAGCATTGGACCTCAAAGCCCATCCCCACAGTGACACACTTTCTCATGAGAAAGGCTTTTTaGCTGAAGGACTTGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VELEHWTSKPIPTVTHFLMRKAF*LKDLPH Trigger: GTGTGGCAAGTCCTTCAGCCAAAAAGCCTTTCTCAT...GAGAAAGTGTGTCACTGTGGGGATGGGCTTTGAGGTCCAATGCTCAAGCTCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| 3UTR CAA 72 bp | TGGCTTACAGTTTCAGAAGGTCAGTCCATTATCATCTaGGCAGGAACCATGGCTGCATGCAGGCAGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: WLTVSEGQSIII*AGTMAACRQTW Trigger: CCATGTCTGCCTGCATGCAGCCATGGTTCCTGCCAAGATGATAATGGACTGACCTTCTGAAACTGTAAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR TCA 90 bp | GTGGAGCTTGAGCATTGGACCTCAAAGCCCATCCCCACAGTGACACACTTTCTCGGATCTGGTCATATATaGTTTCCCACATTCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VELEHWTSKPIPTVTHFLGSGHI*FPTFSA Trigger: TGCACTGAATGTGGGAAATCATATATGACCAGATCC...GAGAAAGTGTGTCACTGTGGGGATGGGCTTTGAGGTCCAATGCTCAAGCTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR CCA 90 bp | ATCCCCACAGTGACACACTTTCTCCAACAAGGCCACGCCTATTCTAAGAAGGCCAGTCCTCTTCCTGGTTaGCAGGTTTCACTGAATACT | + |
|
Preference number: 4 (lower is better) Translates to: IPTVTHFLQQGHAYSKKASPLPG*QVSLNT Trigger: AGTATTCAGTGAAACCTGCCAACCAGGAAGAGGACT...GGCCTTCTTAGAATAGGCGTGGCCTTGTTGGAGAAAGTGTGTCACTGTGGGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR CCA 90 bp | GGTTGTGTCTGTGTTGCTAATAAGAGCATAGTTTGTTCAAAGTCTCCCCCAGATTGTGCTGTTGTAGGGTaGACGGCCTGGCACCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCVCVANKSIVCSKSPPDCAVVG*TAWHLL Trigger: CAGAAGGTGCCAGGCCGTCCACCCTACAACAGCACA...ATCTGGGGGAGACTTTGAACAAACTATGCTCTTATTAGCAACACAGACACAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR CCA 90 bp | CTTCCTCCCCCATTCAAAGTCAGTAACATGGAGACTCCATTCCACACTGGTGCATCTTCTCACTCTGAATaGCCTCTCCACTCTCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: LPPPFKVSNMETPFHTGASSHSE*PLHSPC Trigger: ACATGGAGAGTGGAGAGGCCATTCAGAGTGAGAAGA...TGCACCAGTGTGGAATGGAGTCTCCATGTTACTGACTTTGAATGGGGGAGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR GCA 90 bp | CTTCCTCCCCCATTCAAAGTCAGTAACATGGAGACTCCATTCCACACTGGTGCAACAAGGAAGCAGTTGTaGTTGAAGGTTTTGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LPPPFKVSNMETPFHTGATRKQL*LKVLPH Trigger: GTGTGGCAAAACCTTCAAGCACAACTGCTTCCTTGT...TGCACCAGTGTGGAATGGAGTCTCCATGTTACTGACTTTGAATGGGGGAGGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR CCA 90 bp | CATAAAAGCCTTTCCTCTACTATGAACCTGTTGGTCTTTGATGAGGTGAGTTTTGAATACTGGGAAACCTaGGGCAGGGCTCCACCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: HKSLSSTMNLLVFDEVSFEYWET*GRAPPA Trigger: TGCGGGTGGAGCCCTGCCCCAGGTTTCCCAGTATTC...AAAACTCACCTCATCAAAGACCAACAGGTTCATAGTAGAGGAAAGGCTTTTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR CCA 90 bp | ATCCCCACAGTGACACACTTTCTCCAACAAGGCCACGCCTATTCTAAGAAGGCCATAAGAAAGGCTTTTTaGCTGAAGGACATCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: IPTVTHFLQQGHAYSKKAIRKAF*LKDIPH Trigger: GTGTGGGATGTCCTTCAGCCAAAAAGCCTTTCTTAT...GGCCTTCTTAGAATAGGCGTGGCCTTGTTGGAGAAAGTGTGTCACTGTGGGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR TCA 90 bp | GGTTGTGTCTGTGTTGCTAATAAGAGCATAGTTTGTTCAAAGTCTCCCCCAGATGTTGGCAGGTTTCACTaGATACTGGGAAACCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GCVCVANKSIVCSKSPPDVGRFH*ILGNLG Trigger: CCCCAGGTTTCCCAGTATTCAGTGAAACCTGCCAAC...ATCTGGGGGAGACTTTGAACAAACTATGCTCTTATTAGCAACACAGACACAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR TCA 90 bp | CTTCCTCCCCCATTCAAAGTCAGTAACATGGAGACTCCATTCCACACTGGTGCAGTCCCAAAGAAGACATaGGTGTTAAGATCTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LPPPFKVSNMETPFHTGAVPKKT*VLRSLT Trigger: TGTCAGAGATCTTAACACTCATGTCTTCTTTGGGAC...TGCACCAGTGTGGAATGGAGTCTCCATGTTACTGACTTTGAATGGGGGAGGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR TCA 90 bp | TCACAAACCTATCTGGGTTGTGTCTGTGTTGCTAATAAGAGCATAGTTTGTTCAGAAAGGCTTTTTGGCTaGAGGACATCCCACACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SQTYLGCVCVANKSIVCSERLFG*RTSHTR Trigger: GCGAGTGTGGGATGTCCTTCAGCCAAAAAGCCTTTC...TGAACAAACTATGCTCTTATTAGCAACACAGACACAACCCAGATAGGTTTGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR TCA 90 bp | CTTCCTCACAAAAGTCACTCTCAGAACTTTTCTGCTCAAAGTCACATTCACTCCTTTCACTGTCCACTTTaGTCCAACAACCTGGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPHKSHSQNFSAQSHIHSFHCPL*SNNLES Trigger: TGACTCCAGGTTGTTGGATCAAAGTGGACAGTGAAA...GGAGTGAATGTGACTTTGAGCAGAAAAGTTCTGAGAGTGACTTTTGTGAGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR TCA 90 bp | CATAAAAGCCTTTCCTCTACTATGAACCTGTTGGTCTTTGATGAGGTGAGTTTTTTCTTCTTCTCACTCTaGATGGCCTCTCCACTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HKSLSSTMNLLVFDEVSFFFFSL*MASPLS Trigger: GGAGAGTGGAGAGGCCATTCAGAGTGAGAAGAAGAA...AAAACTCACCTCATCAAAGACCAACAGGTTCATAGTAGAGGAAAGGCTTTTATG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR GCA 90 bp | CATAAAAGCCTTTCCTCTACTATGAACCTGTTGGTCTTTGATGAGGTGAGTTTTTCTGCAGACGGACTCTaGTCAAAGGGTGACATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HKSLSSTMNLLVFDEVSFSADGL*SKGDIS Trigger: TGAAATGTCACCCTTTGAGCAGAGTCCGTCTGCAGA...AAAACTCACCTCATCAAAGACCAACAGGTTCATAGTAGAGGAAAGGCTTTTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR GCA 90 bp | GGTTGTGTCTGTGTTGCTAATAAGAGCATAGTTTGTTCAAAGTCTCCCCCAGATTTTTGCCACAGTCACTaGATATGCAGTTCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GCVCVANKSIVCSKSPPDFCHSH*ICSSSS Trigger: AGAAGAAGAACTGCATATGCAGTGACTGTGGCAAAA...ATCTGGGGGAGACTTTGAACAAACTATGCTCTTATTAGCAACACAGACACAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS CCA 90 bp | CAGTCCTCTTCCTGGTTGGCAGGTTTCACTGAATACTGGGAAACCTaGGGCAGGGCTCCACCCGCAGCCTCCACAATCACCATTGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QSSSWLAGFTEYWET*GRAPPAASTITIGL Trigger: GAGCCCAATGGTGATTGTGGAGGCTGCGGGTGGAGCCCTGCCCCAGGTTTCCCAGTATTCAGTGAAACCTGCCAACCAGGAAGAGGACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR CAA 90 bp | GTGGAGCTTGAGCATTGGACCTCAAAGCCCATCCCCACAGTGACACACTTTCTCCCTCCACAATCACCATaGGGCTCCACTGGCCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: VELEHWTSKPIPTVTHFLPPQSP*GSTGQP Trigger: CGGCTGGCCAGTGGAGCCCAATGGTGATTGTGGAGG...GAGAAAGTGTGTCACTGTGGGGATGGGCTTTGAGGTCCAATGCTCAAGCTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS GCA 90 bp | TGCTGTTGTAGGGTGGACGGCCTGGCACCTTCTGCAGACGGACTCTaGTCAAAGGGTGACATTTCACTGTCCACTTTGATCCAACAACCT | + |
|
Preference number: 5 (lower is better) Translates to: CCCRVDGLAPSADGL*SKGDISLSTLIQQP Trigger: AGGTTGTTGGATCAAAGTGGACAGTGAAATGTCACCCTTTGAGCAGAGTCCGTCTGCAGAAGGTGCCAGGCCGTCCACCCTACAACAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR CAA 90 bp | CTCTTCCTCCCCCATTCAAAGTCAGTAACATGGAGACTCCATTCCACACTGGTGGCAACAAGGAAGCAGTaGTGCTTGAAGGTTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LFLPHSKSVTWRLHSTLVATRKQ*CLKVLP Trigger: TGGCAAAACCTTCAAGCACAACTGCTTCCTTGTTGC...CACCAGTGTGGAATGGAGTCTCCATGTTACTGACTTTGAATGGGGGAGGAAGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS CCA 90 bp | AGTTCTTCTTCTCACTCTGAATGGCCTCTCCACTCTCCATGTTCATaGGGGCATCCCCAACATTATAAGTCACTTGATGCCTTAGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSSSHSEWPLHSPCS*GHPQHYKSLDALED Trigger: GTCTTCTAAGGCATCAAGTGACTTATAATGTTGGGGATGCCCCCATGAACATGGAGAGTGGAGAGGCCATTCAGAGTGAGAAGAAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR CAA 90 bp | CCACGCCCTACACATAAAAGCCTTTCCTCTACTATGAACCTGTTGGTCTTTGATAGGGAGATATTATGCTaGAAGGCTTTGCCACACTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRPTHKSLSSTMNLLVFDREILC*KALPHS Trigger: GGAGTGTGGCAAAGCCTTCAAGCATAATATCTCCCT...ATCAAAGACCAACAGGTTCATAGTAGAGGAAAGGCTTTTATGTGTAGGGCGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR CAA 90 bp | TCACAAACCTATCTGGGTTGTGTCTGTGTTGCTAATAAGAGCATAGTTTGTTCACAGTCCTCTTCCTGGTaGGCAGGTTTCACTGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: SQTYLGCVCVANKSIVCSQSSSW*AGFTEY Trigger: GTATTCAGTGAAACCTGCCAACCAGGAAGAGGACTG...TGAACAAACTATGCTCTTATTAGCAACACAGACACAACCCAGATAGGTTTGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR CAA 90 bp | TCACAAACCTATCTGGGTTGTGTCTGTGTTGCTAATAAGAGCATAGTTTGTTCATGGAGGATCATCACATaGTCCATGCTTAGCACGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SQTYLGCVCVANKSIVCSWRIIT*SMLSTG Trigger: ACCCGTGCTAAGCATGGACAATGTGATGATCCTCCA...TGAACAAACTATGCTCTTATTAGCAACACAGACACAACCCAGATAGGTTTGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS-3UTR CAA 90 bp | TCACAAACCTATCTGGGTTGTGTCTGTGTTGCTAATAAGAGCATAGTTTGTTCAGTGCTAGTAAAAGTTTaGCCACAGTCACTGCATATG | + |
|
Preference number: 5 (lower is better) Translates to: SQTYLGCVCVANKSIVCSVLVKV*PQSLHM Trigger: CATATGCAGTGACTGTGGCAAAACTTTTACTAGCAC...TGAACAAACTATGCTCTTATTAGCAACACAGACACAACCCAGATAGGTTTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS CAA 72 bp | GGGGCAGGGCTCCACCCGCAGCCTCCACAATCACCATaGGGCTCCACTGGCCAGCCGGGCCCTGGGATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GAGLHPQPPQSP*GSTGQPGPGMW Trigger: CCACATCCCAGGGCCCGGCTGGCCAGTGGAGCCCAATGGTGATTGTGGAGGCTGCGGGTGGAGCCCTGCCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS CCA 72 bp | CAGTCCTCTTCCTGGTTGGCAGGTTTCACTGAATACTaGGAAACCTGGGGCAGGGCTCCACCCGCAGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: QSSSWLAGFTEY*ETWGRAPPAAS Trigger: GGAGGCTGCGGGTGGAGCCCTGCCCCAGGTTTCCCAGTATTCAGTGAAACCTGCCAACCAGGAAGAGGACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS CCA 72 bp | GTGTCTCAGCACAGCACAGCATGTGCTGTTGTAGGGTaGACGGCCTGGCACCTTCTGCAGACGGACTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: VSQHSTACAVVG*TAWHLLQTDSA Trigger: AGCAGAGTCCGTCTGCAGAAGGTGCCAGGCCGTCCACCCTACAACAGCACATGCTGTGCTGTGCTGAGACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS GCA 72 bp | AGGGTGGACGGCCTGGCACCTTCTGCAGACGGACTCTaGTCAAAGGGTGACATTTCACTGTCCACTTTGATC | + |
|
Preference number: 6 (lower is better) Translates to: RVDGLAPSADGL*SKGDISLSTLI Trigger: GATCAAAGTGGACAGTGAAATGTCACCCTTTGAGCAGAGTCCGTCTGCAGAAGGTGCCAGGCCGTCCACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS CAA 72 bp | CTTAGAAGACCCGAGGAGGTCTGGAGGATCATCACATaGTCCATGCTTAGCACGGGTGTCTCAGCACAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LRRPEEVWRIIT*SMLSTGVSAQH Trigger: GTGCTGTGCTGAGACACCCGTGCTAAGCATGGACAATGTGATGATCCTCCAGACCTCCTCGGGTCTTCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS TCA 72 bp | CCTGGCACCTTCTGCAGACGGACTCTGCTCAAAGGGTaGCATTTCACTGTCCACTTTGATCCAACAACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PGTFCRRTLLKG*HFTVHFDPTTW Trigger: CCAGGTTGTTGGATCAAAGTGGACAGTGAAATGTCACCCTTTGAGCAGAGTCCGTCTGCAGAAGGTGCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS CAA 72 bp | GCCACATCCTCAAAGGATAAGCAGTCCTCTTCCTGGTaGGCAGGTTTCACTGAATACTGGGAAACCTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ATSSKDKQSSSW*AGFTEYWETWG Trigger: GCCCCAGGTTTCCCAGTATTCAGTGAAACCTGCCAACCAGGAAGAGGACTGCTTATCCTTTGAGGATGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS CAA 90 bp | TCTGCAGACGGACTCTGCTCAAAGGGTGACATTTCACTGTCCACTTaGATCCAACAACCTGGAGTCAGGAATCTCAACGCAGGCACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SADGLCSKGDISLST*IQQPGVRNLNAGTE Trigger: CTCTGTGCCTGCGTTGAGATTCCTGACTCCAGGTTGTTGGATCAAAGTGGACAGTGAAATGTCACCCTTTGAGCAGAGTCCGTCTGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS TCA 72 bp | CCACAGTCACTGCATATGCAGTTCTTCTTCTCACTCTaGATGGCCTCTCCACTCTCCATGTTCATGGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PQSLHMQFFFSL*MASPLSMFMGA Trigger: TGCCCCCATGAACATGGAGAGTGGAGAGGCCATTCAGAGTGAGAAGAAGAACTGCATATGCAGTGACTGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS CCA 72 bp | AGTCACTGCATATGCAGTTCTTCTTCTCACTCTGAATaGCCTCTCCACTCTCCATGTTCATGGGGGCATCCC | + |
|
Preference number: 6 (lower is better) Translates to: SHCICSSSSHSE*PLHSPCSWGHP Trigger: GGGATGCCCCCATGAACATGGAGAGTGGAGAGGCCATTCAGAGTGAGAAGAAGAACTGCATATGCAGTGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||
| CDS CCA 72 bp | TCTCACTCTGAATGGCCTCTCCACTCTCCATGTTCATaGGGGCATCCCCAACATTATAAGTCACTTGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: SHSEWPLHSPCS*GHPQHYKSLDA Trigger: GGCATCAAGTGACTTATAATGTTGGGGATGCCCCCATGAACATGGAGAGTGGAGAGGCCATTCAGAGTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000074455.9 |
||