Pregenerated sensors for ZFP770 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040321Ensembl transcript IDs: ENSMUST00000050668.4
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTATGGCCAAAGAGTTGTTAAAGCAAAGTCTTGCCCCTGGCCACTaGTGTCTGCTGTCAACCACTAATAAGCAAACAGGTGCACTGCAT | + |
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Preference number: 1 (lower is better) Translates to: LMAKELLKQSLAPGH*CLLSTTNKQTGALH Trigger: ATGCAGTGCACCTGTTTGCTTATTAGTGGTTGACAGCAGACAGCAGTGGCCAGGGGCAAGACTTTGCTTTAACAACTCTTTGGCCATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| 3UTR CCA 90 bp | ACATTTCATCTGTGTAAATTATATCCAAGTTTCTTAAGGCTCACTTaGGGCGAAAGCTTTCCTCCTTCCTTCCCCTCACAAAGTACAGCT | + |
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Preference number: 1 (lower is better) Translates to: TFHLCKLYPSFLRLT*GESFPPSFPSQSTA Trigger: AGCTGTACTTTGTGAGGGGAAGGAAGGAGGAAAGCTTTCGCCCCAAGTGAGCCTTAAGAAACTTGGATATAATTTACACAGATGAAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| 3UTR-3UTR CCA 90 bp | TTTGCGCAGGAAACACATACCTCAAGTCTTAAAGAAACAGAAGCTATTCCTTGGGCAAAGTCTTGCCCCTaGCCACTGCTGTCTGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: FAQETHTSSLKETEAIPWAKSCP*PLLSAV Trigger: GACAGCAGACAGCAGTGGCCAGGGGCAAGACTTTGC...CCAAGGAATAGCTTCTGTTTCTTTAAGACTTGAGGTATGTGTTTCCTGCGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| 3UTR-3UTR GCA 90 bp | CCTCACAAAGTACAGCTCTTACACCATGATCAAAACTTACAATTACTCCATCACGTTAAAGCAAAGTCTTaGCCCTGGCCACTGCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: PHKVQLLHHDQNLQLLHHVKAKS*PWPLLS Trigger: AGACAGCAGTGGCCAGGGGCAAGACTTTGCTTTAAC...GTGATGGAGTAATTGTAAGTTTTGATCATGGTGTAAGAGCTGTACTTTGTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| 3UTR-3UTR TCA 90 bp | TCCAACAGAGGGCTTTTCACTATATTTAAGCATGTGAAATATCCACCTGTTTCTATGGTTAGTTGCAGCTaGATGGCAATTCTGGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: SNRGLFTIFKHVKYPPVSMVSCS*MAILAS Trigger: GGAGGCCAGAATTGCCATTCAGCTGCAACTAACCAT...AGAAACAGGTGGATATTTCACATGCTTAAATATAGTGAAAAGCCCTCTGTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| 3UTR-3UTR GCA 90 bp | TCCAACAGAGGGCTTTTCACTATATTTAAGCATGTGAAATATCCACCTGTTTCTCTGGCCACTGCTGTCTaGTGTCAACCACTAATAAGC | + |
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Preference number: 2 (lower is better) Translates to: SNRGLFTIFKHVKYPPVSLATAV*CQPLIS Trigger: GCTTATTAGTGGTTGACAGCAGACAGCAGTGGCCAG...AGAAACAGGTGGATATTTCACATGCTTAAATATAGTGAAAAGCCCTCTGTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| 3UTR CAA 90 bp | TTGATTGAATTTAGCAGAAGAGATTTAATTCTTATGGCCAAAGAGTaGTTAAAGCAAAGTCTTGCCCCTGGCCACTGCTGTCTGCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: LIEFSRRDLILMAKE*LKQSLAPGHCCLLS Trigger: TGACAGCAGACAGCAGTGGCCAGGGGCAAGACTTTGCTTTAACAACTCTTTGGCCATAAGAATTAAATCTCTTCTGCTAAATTCAATCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| 3UTR-3UTR CCA 90 bp | TCCAACAGAGGGCTTTTCACTATATTTAAGCATGTGAAATATCCACCTGTTTCTCCAAATGTAGGCCTTTaGCAAAAATGCCTTATGGGG | + |
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Preference number: 2 (lower is better) Translates to: SNRGLFTIFKHVKYPPVSPNVGL*QKCLMG Trigger: CCCCATAAGGCATTTTTGCCAAAGGCCTACATTTGG...AGAAACAGGTGGATATTTCACATGCTTAAATATAGTGAAAAGCCCTCTGTTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| 3UTR-3UTR TCA 90 bp | TCCAACAGAGGGCTTTTCACTATATTTAAGCATGTGAAATATCCACCTGTTTCTTCTTTCACAGAAGAGTaGAGTCTGAAACTACATAGC | + |
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Preference number: 2 (lower is better) Translates to: SNRGLFTIFKHVKYPPVSSFTEE*SLKLHS Trigger: GCTATGTAGTTTCAGACTTCACTCTTCTGTGAAAGA...AGAAACAGGTGGATATTTCACATGCTTAAATATAGTGAAAAGCCCTCTGTTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| 3UTR-3UTR GCA 90 bp | TCCAACAGAGGGCTTTTCACTATATTTAAGCATGTGAAATATCCACCTGTTTCTTTTAGAAACAAATACTaGCTTGAGCTTTCTAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: SNRGLFTIFKHVKYPPVSFRNKY*LELSKH Trigger: GTGCTTAGAAAGCTCAAGGCAGTATTTGTTTCTAAA...AGAAACAGGTGGATATTTCACATGCTTAAATATAGTGAAAAGCCCTCTGTTGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| 3UTR GCA 72 bp | AAAGAGTTGTTAAAGCAAAGTCTTGCCCCTGGCCACTaGTGTCTGCTGTCAACCACTAATAAGCAAACAGGT | + |
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Preference number: 3 (lower is better) Translates to: KELLKQSLAPGH*CLLSTTNKQTG Trigger: ACCTGTTTGCTTATTAGTGGTTGACAGCAGACAGCAGTGGCCAGGGGCAAGACTTTGCTTTAACAACTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| 3UTR-3UTR CAA 90 bp | CAGGAAACACATACCTCAAGTCTTAAAGAAACAGAAGCTATTCCTTGGAGCATGTTTCTTAAGGCTCACTaGGGGCGAAAGCTTTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: QETHTSSLKETEAIPWSMFLKAH*GRKLSS Trigger: GGAGGAAAGCTTTCGCCCCAAGTGAGCCTTAAGAAA...CATGCTCCAAGGAATAGCTTCTGTTTCTTTAAGACTTGAGGTATGTGTTTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| 3UTR CCA 72 bp | CTGTGTAAATTATATCCAAGTTTCTTAAGGCTCACTTaGGGCGAAAGCTTTCCTCCTTCCTTCCCCTCACAA | + |
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Preference number: 3 (lower is better) Translates to: LCKLYPSFLRLT*GESFPPSFPSQ Trigger: TTGTGAGGGGAAGGAAGGAGGAAAGCTTTCGCCCCAAGTGAGCCTTAAGAAACTTGGATATAATTTACACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| 3UTR CCA 72 bp | CATACCTCAAGTCTTAAAGAAACAGAAGCTATTCCTTaGAGCATGCGGCTCTCCTCTTTAGACAGATTCTCT | + |
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Preference number: 3 (lower is better) Translates to: HTSSLKETEAIP*SMRLSSLDRFS Trigger: AGAGAATCTGTCTAAAGAGGAGAGCCGCATGCTCCAAGGAATAGCTTCTGTTTCTTTAAGACTTGAGGTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| 3UTR CCA 72 bp | CAGAGTTATATGCTGACAACCTTAGAGTCCTATGGATaGCATCAGACCATGCTATTCCTTCTCAAGTCATTT | + |
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Preference number: 3 (lower is better) Translates to: QSYMLTTLESYG*HQTMLFLLKSF Trigger: AAATGACTTGAGAAGGAATAGCATGGTCTGATGCCATCCATAGGACTCTAAGGTTGTCAGCATATAACTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| 3UTR-3UTR CAA 90 bp | CAGGAAACACATACCTCAAGTCTTAAAGAAACAGAAGCTATTCCTTGGAGCATGATGCATGGCAAGCAATaGCCTATGAAGTCACCAAAT | + |
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Preference number: 3 (lower is better) Translates to: QETHTSSLKETEAIPWSMMHGKQ*PMKSPN Trigger: ATTTGGTGACTTCATAGGCAATTGCTTGCCATGCAT...CATGCTCCAAGGAATAGCTTCTGTTTCTTTAAGACTTGAGGTATGTGTTTCCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| 3UTR-3UTR CAA 90 bp | ACTTCCAACAGAGGGCTTTTCACTATATTTAAGCATGTGAAATATCCACCTGTTCTTATGGCCAAAGAGTaGTTAAAGCAAAGTCTTGCC | + |
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Preference number: 3 (lower is better) Translates to: TSNRGLFTIFKHVKYPPVLMAKE*LKQSLA Trigger: GGCAAGACTTTGCTTTAACAACTCTTTGGCCATAAG...AACAGGTGGATATTTCACATGCTTAAATATAGTGAAAAGCCCTCTGTTGGAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| 3UTR-3UTR CAA 90 bp | TCCAACAGAGGGCTTTTCACTATATTTAAGCATGTGAAATATCCACCTGTTTCTGTACAACCCAGCTTCTaGCTACTTTTAAATTCCTCA | + |
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Preference number: 3 (lower is better) Translates to: SNRGLFTIFKHVKYPPVSVQPSF*LLLNSS Trigger: TGAGGAATTTAAAAGTAGCAAGAAGCTGGGTTGTAC...AGAAACAGGTGGATATTTCACATGCTTAAATATAGTGAAAAGCCCTCTGTTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR CCA 90 bp | CACTGCTGTCTGCTGTCAACCACTAATAAGCAAACAGGTGCACTGCATTTAACTGAACTTTCACAGCTTTaGGAACCAAGCCCCTCGCAC | + |
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Preference number: 4 (lower is better) Translates to: HCCLLSTTNKQTGALHLTELSQL*EPSPSH Trigger: GTGCGAGGGGCTTGGTTCCCAAAGCTGTGAAAGTTC...AGTTAAATGCAGTGCACCTGTTTGCTTATTAGTGGTTGACAGCAGACAGCAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR TCA 90 bp | ACTTCCAACAGAGGGCTTTTCACTATATTTAAGCATGTGAAATATCCACCTGTTATGATGGCTCTGCTCTaGCTCCACCAGTGCGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: TSNRGLFTIFKHVKYPPVMMALL*LHQCVG Trigger: GCCAACGCACTGGTGGAGTCAGAGCAGAGCCATCAT...AACAGGTGGATATTTCACATGCTTAAATATAGTGAAAAGCCCTCTGTTGGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR CCA 90 bp | GCCTATGAAGTCACCAAATGTAGGCCTTTGGCAAAAATGCCTTATGGGGTATTATCTTTTGAGTCTGCTTaGAACTCTGCCACCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: AYEVTKCRPLAKMPYGVLSFESA*NSATSG Trigger: GCCAGAGGTGGCAGAGTTCCAAGCAGACTCAAAAGA...TAATACCCCATAAGGCATTTTTGCCAAAGGCCTACATTTGGTGACTTCATAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR CCA 90 bp | ACTTGGGGCGAAAGCTTTCCTCCTTCCTTCCCCTCACAAAGTACAGCTCTTACAGGATGGATGAAAAGTTaGTTCACATTTCCAAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: TWGESFPPSFPSQSTALTGWMKS*FTFPKS Trigger: GGACTTTGGAAATGTGAACCAACTTTTCATCCATCC...TGTAAGAGCTGTACTTTGTGAGGGGAAGGAAGGAGGAAAGCTTTCGCCCCAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR TCA 90 bp | ACTTGGGGCGAAAGCTTTCCTCCTTCCTTCCCCTCACAAAGTACAGCTCTTACATTGGCTACACATTGCTaGATCTTCAGCATTTTAAAG | + |
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Preference number: 4 (lower is better) Translates to: TWGESFPPSFPSQSTALTLATHC*IFSILK Trigger: CTTTAAAATGCTGAAGATTCAGCAATGTGTAGCCAA...TGTAAGAGCTGTACTTTGTGAGGGGAAGGAAGGAGGAAAGCTTTCGCCCCAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR GCA 90 bp | TCCAACAGAGGGCTTTTCACTATATTTAAGCATGTGAAATATCCACCTGTTTCTGTCTGCTTGGAACTCTaGCACCTCTGGCAGGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: SNRGLFTIFKHVKYPPVSVCLEL*HLWQED Trigger: GTCTTCCTGCCAGAGGTGGCAGAGTTCCAAGCAGAC...AGAAACAGGTGGATATTTCACATGCTTAAATATAGTGAAAAGCCCTCTGTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR CCA 90 bp | TCCAACAGAGGGCTTTTCACTATATTTAAGCATGTGAAATATCCACCTGTTTCTGAACTCTGCCACCTCTaGCAGGAAGACACTTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: SNRGLFTIFKHVKYPPVSELCHL*QEDTCV Trigger: GACACAAGTGTCTTCCTGCCAGAGGTGGCAGAGTTC...AGAAACAGGTGGATATTTCACATGCTTAAATATAGTGAAAAGCCCTCTGTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR TCA 90 bp | CCTATGAAGTCACCAAATGTAGGCCTTTGGCAAAAATGCCTTATGGGGTATTATAGTTACAGCTTCTTTTaGGTCTGCTTGGAACTCTGC | + |
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Preference number: 4 (lower is better) Translates to: PMKSPNVGLWQKCLMGYYSYSFF*VCLELC Trigger: GCAGAGTTCCAAGCAGACTCAAAAGAAGCTGTAACT...ATAATACCCCATAAGGCATTTTTGCCAAAGGCCTACATTTGGTGACTTCATAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR TCA 90 bp | GCCTATGAAGTCACCAAATGTAGGCCTTTGGCAAAAATGCCTTATGGGGTATTAGCTAACTGTCTTGTATaGACCATGTCTGCTAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: AYEVTKCRPLAKMPYGVLANCLV*TMSAKR Trigger: TCTCTTAGCAGACATGGTTCATACAAGACAGTTAGC...TAATACCCCATAAGGCATTTTTGCCAAAGGCCTACATTTGGTGACTTCATAGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR TCA 90 bp | CCTATGAAGTCACCAAATGTAGGCCTTTGGCAAAAATGCCTTATGGGGTATTATTGTTTTACCACAGACTaGGCACTCAAATGGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: PMKSPNVGLWQKCLMGYYCFTTD*ALKWLL Trigger: CAGAAGCCATTTGAGTGCTCAGTCTGTGGTAAAACA...ATAATACCCCATAAGGCATTTTTGCCAAAGGCCTACATTTGGTGACTTCATAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR GCA 90 bp | CAGGAAACACATACCTCAAGTCTTAAAGAAACAGAAGCTATTCCTTGGAGCATGGTTTACAACAAACACTaGACTGGTAAAGGAGCCCGT | + |
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Preference number: 4 (lower is better) Translates to: QETHTSSLKETEAIPWSMVYNKH*TGKGAR Trigger: ACGGGCTCCTTTACCAGTGCAGTGTTTGTTGTAAAC...CATGCTCCAAGGAATAGCTTCTGTTTCTTTAAGACTTGAGGTATGTGTTTCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR CCA 90 bp | GCCTATGAAGTCACCAAATGTAGGCCTTTGGCAAAAATGCCTTATGGGGTATTACTCTTACCCGTATTTTaGCTCTGGAATTGCTTTTGC | + |
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Preference number: 4 (lower is better) Translates to: AYEVTKCRPLAKMPYGVLLLPVF*LWNCFC Trigger: GCAAAAGCAATTCCAGAGCCAAAATACGGGTAAGAG...TAATACCCCATAAGGCATTTTTGCCAAAGGCCTACATTTGGTGACTTCATAGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR TCA 90 bp | TCCAACAGAGGGCTTTTCACTATATTTAAGCATGTGAAATATCCACCTGTTTCTTACCTGACTGGACTCTaGACTTTCACAGCTTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: SNRGLFTIFKHVKYPPVSYLTGL*TFTALG Trigger: TCCCAAAGCTGTGAAAGTTCAGAGTCCAGTCAGGTA...AGAAACAGGTGGATATTTCACATGCTTAAATATAGTGAAAAGCCCTCTGTTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR CCA 90 bp | TCCAACAGAGGGCTTTTCACTATATTTAAGCATGTGAAATATCCACCTGTTTCTTGCCTGCTCCTACAGTaGGAACCAAGAAGAAAATCC | + |
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Preference number: 4 (lower is better) Translates to: SNRGLFTIFKHVKYPPVSCLLLQ*EPRRKS Trigger: GGATTTTCTTCTTGGTTCCCACTGTAGGAGCAGGCA...AGAAACAGGTGGATATTTCACATGCTTAAATATAGTGAAAAGCCCTCTGTTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR TCA 90 bp | CAGGAAACACATACCTCAAGTCTTAAAGAAACAGAAGCTATTCCTTGGAGCATGAGGGACAATGTAAATTaGGTGGACATCAAGAGGATT | + |
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Preference number: 4 (lower is better) Translates to: QETHTSSLKETEAIPWSMRDNVN*VDIKRI Trigger: AATCCTCTTGATGTCCACTCAATTTACATTGTCCCT...CATGCTCCAAGGAATAGCTTCTGTTTCTTTAAGACTTGAGGTATGTGTTTCCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR TCA 90 bp | TTTGCGCAGGAAACACATACCTCAAGTCTTAAAGAAACAGAAGCTATTCCTTGGCATCACTTGGATGGATaGAAAGTTGGTTCACATTTC | + |
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Preference number: 4 (lower is better) Translates to: FAQETHTSSLKETEAIPWHHLDG*KVGSHF Trigger: GAAATGTGAACCAACTTTTCATCCATCCAAGTGATG...CCAAGGAATAGCTTCTGTTTCTTTAAGACTTGAGGTATGTGTTTCCTGCGCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR GCA 90 bp | CCTCACAAAGTACAGCTCTTACACCATGATCAAAACTTACAATTACTCCATCACCTCTGGAATTGCTTTTaGCAAGAAAATGGCAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: PHKVQLLHHDQNLQLLHHLWNCF*QENGKA Trigger: GGCTTTGCCATTTTCTTGGCAAAAGCAATTCCAGAG...GTGATGGAGTAATTGTAAGTTTTGATCATGGTGTAAGAGCTGTACTTTGTGAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR TCA 90 bp | TCCAACAGAGGGCTTTTCACTATATTTAAGCATGTGAAATATCCACCTGTTTCTCCTCTGGTTCTACCTTaGCTTCAATTTCTGATACCT | + |
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Preference number: 4 (lower is better) Translates to: SNRGLFTIFKHVKYPPVSPLVLP*LQFLIP Trigger: AGGTATCAGAAATTGAAGTCAAGGTAGAACCAGAGG...AGAAACAGGTGGATATTTCACATGCTTAAATATAGTGAAAAGCCCTCTGTTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR CCA 90 bp | ATGTTAGTCAAAGATTTTACAAACTGCCACAAATGTGAAGGACTCGTGACTAGGAGTGTCTTTCTAGTTTaGACGGAGATCGGAAATGTT | + |
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Preference number: 4 (lower is better) Translates to: MLVKDFTNCHKCEGLVTRSVFLV*TEIGNV Trigger: AACATTTCCGATCTCCGTCCAAACTAGAAAGACACT...CCTAGTCACGAGTCCTTCACATTTGTGGCAGTTTGTAAAATCTTTGACTAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| 3UTR CAA 72 bp | TTATTTATCTTACTCCTGATTATGCATGGCAAGCAATaGCCTATGAAGTCACCAAATGTAGGCCTTTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: LFILLLIMHGKQ*PMKSPNVGLWQ Trigger: TTGCCAAAGGCCTACATTTGGTGACTTCATAGGCAATTGCTTGCCATGCATAATCAGGAGTAAGATAAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR GCA 90 bp | CTTTTAATACAACCAGAGTTATATGCTGACAACCTTAGAGTCCTATGGATGGCATGCCCATCTCTCATCTaGAGTAAAAGTATTACACAT | + |
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Preference number: 4 (lower is better) Translates to: LLIQPELYADNLRVLWMACPSLI*SKSITH Trigger: ATGTGTAATACTTTTACTGCAGATGAGAGATGGGCA...TGCCATCCATAGGACTCTAAGGTTGTCAGCATATAACTCTGGTTGTATTAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR GCA 90 bp | CTTTTAATACAACCAGAGTTATATGCTGACAACCTTAGAGTCCTATGGATGGCATCTCTTCCAATGAGGTaGTTGTCTAAATGTTTTACC | + |
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Preference number: 4 (lower is better) Translates to: LLIQPELYADNLRVLWMASLPMR*LSKCFT Trigger: GGTAAAACATTTAGACAAGCACCTCATTGGAAGAGA...TGCCATCCATAGGACTCTAAGGTTGTCAGCATATAACTCTGGTTGTATTAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS GCA 90 bp | GGCTCTGCTCTGACTCCACCAGTGCGTTGGCGAGGTAAGACTGCCTaGTCCTACAGTGGGAACCAAGAAGAAAATCCTCTGGTTCTACCT | + |
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Preference number: 5 (lower is better) Translates to: GSALTPPVRWRGKTA*SYSGNQEENPLVLP Trigger: AGGTAGAACCAGAGGATTTTCTTCTTGGTTCCCACTGTAGGAGCAGGCAGTCTTACCTCGCCAACGCACTGGTGGAGTCAGAGCAGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS GCA 90 bp | GTCTTTCTAGTTTGGACGGAGATCGGAAATGTTTACAACAAACACTaGACTGGTAAAGGAGCCCGTCACTTCTTTCAGGACGGCCTAAGT | + |
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Preference number: 5 (lower is better) Translates to: VFLVWTEIGNVYNKH*TGKGARHFFQDGLS Trigger: ACTTAGGCCGTCCTGAAAGAAGTGACGGGCTCCTTTACCAGTGCAGTGTTTGTTGTAAACATTTCCGATCTCCGTCCAAACTAGAAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS CCA 90 bp | AAGCCCCTCGCACTGTTGGGAGGCATTATAGCTAACATCATCACTTaGATGGATGAAAAGTTGGTTCACATTTCCAAAGTCCACTCGCCA | + |
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Preference number: 5 (lower is better) Translates to: KPLALLGGIIANIIT*MDEKLVHISKVHSP Trigger: TGGCGAGTGGACTTTGGAAATGTGAACCAACTTTTCATCCATCCAAGTGATGATGTTAGCTATAATGCCTCCCAACAGTGCGAGGGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR CAA 90 bp | ATGTTAGTCAAAGATTTTACAAACTGCCACAAATGTGAAGGACTCGTGACTAGGCTGGCAGGAAGACACTaGTGTCCATTGAGAATCTGC | + |
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Preference number: 5 (lower is better) Translates to: MLVKDFTNCHKCEGLVTRLAGRH*CPLRIC Trigger: GCAGATTCTCAATGGACACAAGTGTCTTCCTGCCAG...CCTAGTCACGAGTCCTTCACATTTGTGGCAGTTTGTAAAATCTTTGACTAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR CAA 90 bp | CCTATGAAGTCACCAAATGTAGGCCTTTGGCAAAAATGCCTTATGGGGTATTATTCCTCTGGTTCTACCTaGACTTCAATTTCTGATACC | + |
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Preference number: 5 (lower is better) Translates to: PMKSPNVGLWQKCLMGYYSSGST*TSISDT Trigger: GGTATCAGAAATTGAAGTCAAGGTAGAACCAGAGGA...ATAATACCCCATAAGGCATTTTTGCCAAAGGCCTACATTTGGTGACTTCATAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR CAA 90 bp | CGCATAAAACCAAAGACACACAAGGTCTTGAGTAATTCAACACATGAGGCCAAAAAGGGACAATGTAAATaGAGTGGACATCAAGAGGAT | + |
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Preference number: 5 (lower is better) Translates to: RIKPKTHKVLSNSTHEAKKGQCK*SGHQED Trigger: ATCCTCTTGATGTCCACTCAATTTACATTGTCCCTT...TTTGGCCTCATGTGTTGAATTACTCAAGACCTTGTGTGTCTTTGGTTTTATGCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR CAA 90 bp | CCTATGAAGTCACCAAATGTAGGCCTTTGGCAAAAATGCCTTATGGGGTATTATTTTGTTGGCTACACATaGCTGAATCTTCAGCATTTT | + |
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Preference number: 5 (lower is better) Translates to: PMKSPNVGLWQKCLMGYYFVGYT*LNLQHF Trigger: AAAATGCTGAAGATTCAGCAATGTGTAGCCAACAAA...ATAATACCCCATAAGGCATTTTTGCCAAAGGCCTACATTTGGTGACTTCATAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR CAA 90 bp | CCTCACAAAGTACAGCTCTTACACCATGATCAAAACTTACAATTACTCCATCACAAATGTTCTCTGAGTTaGTTCTATGTTCGGCTTACC | + |
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Preference number: 5 (lower is better) Translates to: PHKVQLLHHDQNLQLLHHKCSLS*FYVRLT Trigger: GGTAAGCCGAACATAGAACAAACTCAGAGAACATTT...GTGATGGAGTAATTGTAAGTTTTGATCATGGTGTAAGAGCTGTACTTTGTGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR CAA 90 bp | TTTGCGCAGGAAACACATACCTCAAGTCTTAAAGAAACAGAAGCTATTCCTTGGTTTTTGCTAACTGTCTaGTATGAACCATGTCTGCTA | + |
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Preference number: 5 (lower is better) Translates to: FAQETHTSSLKETEAIPWFLLTV*YEPCLL Trigger: TAGCAGACATGGTTCATACAAGACAGTTAGCAAAAA...CCAAGGAATAGCTTCTGTTTCTTTAAGACTTGAGGTATGTGTTTCCTGCGCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR CAA 90 bp | CCTCACAAAGTACAGCTCTTACACCATGATCAAAACTTACAATTACTCCATCACTGGATGGATGAAAAGTaGGTTCACATTTCCAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: PHKVQLLHHDQNLQLLHHWMDEK*VHISKV Trigger: GACTTTGGAAATGTGAACCAACTTTTCATCCATCCA...GTGATGGAGTAATTGTAAGTTTTGATCATGGTGTAAGAGCTGTACTTTGTGAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR CAA 90 bp | TCCAACAGAGGGCTTTTCACTATATTTAAGCATGTGAAATATCCACCTGTTTCTAGTGCCTATCAAGTTTaGATTGTGACGGAAACATTT | + |
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Preference number: 5 (lower is better) Translates to: SNRGLFTIFKHVKYPPVSSAYQV*IVTETF Trigger: AAATGTTTCCGTCACAATCAAAACTTGATAGGCACT...AGAAACAGGTGGATATTTCACATGCTTAAATATAGTGAAAAGCCCTCTGTTGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS-3UTR CAA 90 bp | ACTTCCAACAGAGGGCTTTTCACTATATTTAAGCATGTGAAATATCCACCTGTTATAGAAGGAAACACTTaGTCACATTTATCACAGGGA | + |
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Preference number: 5 (lower is better) Translates to: TSNRGLFTIFKHVKYPPVIEGNT*SHLSQG Trigger: TCCCTGTGATAAATGTGACAAAGTGTTTCCTTCTAT...AACAGGTGGATATTTCACATGCTTAAATATAGTGAAAAGCCCTCTGTTGGAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS GCA 72 bp | CTGACTCCACCAGTGCGTTGGCGAGGTAAGACTGCCTaGTCCTACAGTGGGAACCAAGAAGAAAATCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LTPPVRWRGKTA*SYSGNQEENPL Trigger: CAGAGGATTTTCTTCTTGGTTCCCACTGTAGGAGCAGGCAGTCTTACCTCGCCAACGCACTGGTGGAGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS CAA 72 bp | ACTTTCACAGCTTTGGGAACCAAGCCCCTCGCACTGTaGGGAGGCATTATAGCTAACATCATCACTTGGATG | + |
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Preference number: 6 (lower is better) Translates to: TFTALGTKPLAL*GGIIANIITWM Trigger: CATCCAAGTGATGATGTTAGCTATAATGCCTCCCAACAGTGCGAGGGGCTTGGTTCCCAAAGCTGTGAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS TCA 72 bp | TCCTCTGGTTCTACCTTGACTTCAATTTCTGATACCTaGCTGGACTCTGAACTTTCACAGCTTTGGGAACCA | + |
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Preference number: 6 (lower is better) Translates to: SSGSTLTSISDT*LDSELSQLWEP Trigger: TGGTTCCCAAAGCTGTGAAAGTTCAGAGTCCAGTCAGGTATCAGAAATTGAAGTCAAGGTAGAACCAGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS TCA 72 bp | AGTGGGAACCAAGAAGAAAATCCTCTGGTTCTACCTTaGCTTCAATTTCTGATACCTGACTGGACTCTGAAC | + |
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Preference number: 6 (lower is better) Translates to: SGNQEENPLVLP*LQFLIPDWTLN Trigger: GTTCAGAGTCCAGTCAGGTATCAGAAATTGAAGTCAAGGTAGAACCAGAGGATTTTCTTCTTGGTTCCCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS GCA 72 bp | TCCATAGATAATATGCTTCCCGTTGTAAGGATGCCTTaGAAACTCTTACCCGTATTTTGGCTCTGGAATTGC | + |
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Preference number: 6 (lower is better) Translates to: SIDNMLPVVRMP*KLLPVFWLWNC Trigger: GCAATTCCAGAGCCAAAATACGGGTAAGAGTTTGCAAGGCATCCTTACAACGGGAAGCATATTATCTATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS CCA 72 bp | GCACTGTTGGGAGGCATTATAGCTAACATCATCACTTaGATGGATGAAAAGTTGGTTCACATTTCCAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: ALLGGIIANIIT*MDEKLVHISKV Trigger: GACTTTGGAAATGTGAACCAACTTTTCATCCATCCAAGTGATGATGTTAGCTATAATGCCTCCCAACAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS CAA 72 bp | AAAGTATTACACATTCCATATACCGGCTTCTCTTGCTaGGTCTCAAGCAGTCTTCTGACTTTAACATCATTA | + |
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Preference number: 6 (lower is better) Translates to: KVLHIPYTGFSC*VSSSLLTLTSL Trigger: TAATGATGTTAAAGTCAGAAGACTGCTTGAGACCAAGCAAGAGAAGCCGGTATATGGAATGTGTAATACTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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| CDS CAA 72 bp | ATTATAGCTAACATCATCACTTGGATGGATGAAAAGTaGGTTCACATTTCCAAAGTCCACTCGCCAAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: IIANIITWMDEK*VHISKVHSPKR Trigger: TCTTTTTGGCGAGTGGACTTTGGAAATGTGAACCAACTTTTCATCCATCCAAGTGATGATGTTAGCTATAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050668.4 |
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