Pregenerated sensors for ZFP764 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045757Ensembl transcript IDs: ENSMUST00000059199.7
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAACTGGTCTCAAATTTCTGATCTTCCTGTCTCTACCTCCCCAGTaGGGGAATCACAGGCAGGAACCACCACACCGGGCTCTTGACCAG | + |
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Preference number: 1 (lower is better) Translates to: QTGLKFLIFLSLPPQ*GNHRQEPPHRALDQ Trigger: CTGGTCAAGAGCCCGGTGTGGTGGTTCCTGCCTGTGATTCCCCCACTGGGGAGGTAGAGACAGGAAGATCAGAAATTTGAGACCAGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| 3UTR TCA 90 bp | AAAGACTGTACCCGGTGCCCAGACCAGCAGTACCTAGAACGTCTGTaGCTTCCGGAAGATGACATAGGTTCAACCCTCTGGACCTCAAAC | + |
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Preference number: 1 (lower is better) Translates to: KDCTRCPDQQYLERL*LPEDDIGSTLWTSN Trigger: GTTTGAGGTCCAGAGGGTTGAACCTATGTCATCTTCCGGAAGTCACAGACGTTCTAGGTACTGCTGGTCTGGGCACCGGGTACAGTCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| 3UTR CCA 90 bp | GCTACCAAGGGCTGCAAGCAAGCATGTGCCAGCACACACAGTGTATaGAGTGCTGAGAATGGACCACAGAACTCTTCTGTCTTGTTTGCT | + |
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Preference number: 1 (lower is better) Translates to: ATKGCKQACASTHSV*SAENGPQNSSVLFA Trigger: AGCAAACAAGACAGAAGAGTTCTGTGGTCCATTCTCAGCACTCCATACACTGTGTGTGCTGGCACATGCTTGCTTGCAGCCCTTGGTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| 3UTR TCA 90 bp | ACCCACACAGAGCCATCAACTTTAGCCTCTGCATTAAAGACACAATaGCTTCAACGAGGCTCTCTTCATCCTCAGGCCTATCAATACTTC | + |
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Preference number: 1 (lower is better) Translates to: THTEPSTLASALKTQ*LQRGSLHPQAYQYF Trigger: GAAGTATTGATAGGCCTGAGGATGAAGAGAGCCTCGTTGAAGTCATTGTGTCTTTAATGCAGAGGCTAAAGTTGATGGCTCTGTGTGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| 3UTR-3UTR TCA 90 bp | ACAGGCAGGAACCACCACACCGGGCTCTTGACCAGTAACTCAATCCCGGAGAATGCATTAAAGACACAATaGCTTCAACGAGGCTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: TGRNHHTGLLTSNSIPENALKTQ*LQRGSL Trigger: AAGAGAGCCTCGTTGAAGTCATTGTGTCTTTAATGC...ATTCTCCGGGATTGAGTTACTGGTCAAGAGCCCGGTGTGGTGGTTCCTGCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| 3UTR-3UTR TCA 90 bp | TCAATACTTCTGAGCCAGGAAAAGGCCCTCGCTTCTCATGGAGCTCTAGTAGGGTACCTAGAACGTCTGTaGCTTCCGGAAGATGACATA | + |
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Preference number: 2 (lower is better) Translates to: SILLSQEKALASHGALVGYLERL*LPEDDI Trigger: TATGTCATCTTCCGGAAGTCACAGACGTTCTAGGTA...CCCTACTAGAGCTCCATGAGAAGCGAGGGCCTTTTCCTGGCTCAGAAGTATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| 3UTR-3UTR CCA 90 bp | CAAGCATGTGCCAGCACACACAGTGTATGGAGTGCTGAGAATGGACCACAGAACTCAGGTGACCCAAACTaGTCTCAAATTTCTGATCTT | + |
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Preference number: 2 (lower is better) Translates to: QACASTHSVWSAENGPQNSGDPN*SQISDL Trigger: AAGATCAGAAATTTGAGACCAGTTTGGGTCACCTGA...GTTCTGTGGTCCATTCTCAGCACTCCATACACTGTGTGTGCTGGCACATGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| 3UTR-3UTR GCA 90 bp | ACCTACAAACTTGGGCCTTTGGTACATGTGATAGATACTTTGGTTTTTAAACTGCTCAATCCCGGAGAATaGAGCTGGCTCAACCCACAC | + |
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Preference number: 2 (lower is better) Translates to: TYKLGPLVHVIDTLVFKLLNPGE*SWLNPH Trigger: GTGTGGGTTGAGCCAGCTGCATTCTCCGGGATTGAG...CAGTTTAAAAACCAAAGTATCTATCACATGTACCAAAGGCCCAAGTTTGTAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| 3UTR-3UTR CCA 90 bp | TTCATTTATGTTTATATGCAGTCTCAGGTGACCCAAACTGGTCTCAAATTTCTGTCTCTACCTCCCCAGTaGGGGAATCACAGGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: FIYVYMQSQVTQTGLKFLSLPPQ*GNHRQE Trigger: TTCCTGCCTGTGATTCCCCCACTGGGGAGGTAGAGA...CAGAAATTTGAGACCAGTTTGGGTCACCTGAGACTGCATATAAACATAAATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| 3UTR-3UTR TCA 90 bp | AGAACCTACAAACTTGGGCCTTTGGTACATGTGATAGATACTTTGGTTTTTAAAGCCTATCAATACTTCTaGGCCAGGAAAAGGCCCTCG | + |
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Preference number: 2 (lower is better) Translates to: RTYKLGPLVHVIDTLVFKAYQYF*ARKRPS Trigger: CGAGGGCCTTTTCCTGGCTCAGAAGTATTGATAGGC...TTTAAAAACCAAAGTATCTATCACATGTACCAAAGGCCCAAGTTTGTAGGTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| 3UTR-3UTR CCA 90 bp | ATTCATTTATGTTTATATGCAGTCTCAGGTGACCCAAACTGGTCTCAAATTTCTATAGGTTCAACCCTCTaGACCTCAAACAATGTACAT | + |
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Preference number: 2 (lower is better) Translates to: IHLCLYAVSGDPNWSQISIGSTL*TSNNVH Trigger: ATGTACATTGTTTGAGGTCCAGAGGGTTGAACCTAT...AGAAATTTGAGACCAGTTTGGGTCACCTGAGACTGCATATAAACATAAATGAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| 3UTR TCA 72 bp | ACCCGGTGCCCAGACCAGCAGTACCTAGAACGTCTGTaGCTTCCGGAAGATGACATAGGTTCAACCCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: TRCPDQQYLERL*LPEDDIGSTLW Trigger: CCAGAGGGTTGAACCTATGTCATCTTCCGGAAGTCACAGACGTTCTAGGTACTGCTGGTCTGGGCACCGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| 3UTR CCA 72 bp | CTCAAATTTCTGATCTTCCTGTCTCTACCTCCCCAGTaGGGGAATCACAGGCAGGAACCACCACACCGGGCT | + |
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Preference number: 3 (lower is better) Translates to: LKFLIFLSLPPQ*GNHRQEPPHRA Trigger: AGCCCGGTGTGGTGGTTCCTGCCTGTGATTCCCCCACTGGGGAGGTAGAGACAGGAAGATCAGAAATTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| 3UTR TCA 72 bp | CGAGGCTCTCTTCATCCTCAGGCCTATCAATACTTCTaGGCCAGGAAAAGGCCCTCGCTTCTCATGGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: RGSLHPQAYQYF*ARKRPSLLMEL Trigger: GAGCTCCATGAGAAGCGAGGGCCTTTTCCTGGCTCAGAAGTATTGATAGGCCTGAGGATGAAGAGAGCCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| 3UTR CCA 72 bp | AATACTTCTGAGCCAGGAAAAGGCCCTCGCTTCTCATaGAGCTCTAGTAGGGTTGCCCAGCCCAGCCCAATA | + |
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Preference number: 3 (lower is better) Translates to: NTSEPGKGPRFS*SSSRVAQPSPI Trigger: TATTGGGCTGGGCTGGGCAACCCTACTAGAGCTCCATGAGAAGCGAGGGCCTTTTCCTGGCTCAGAAGTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| 3UTR CCA 72 bp | GGCTGCAAGCAAGCATGTGCCAGCACACACAGTGTATaGAGTGCTGAGAATGGACCACAGAACTCTTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: GCKQACASTHSV*SAENGPQNSSV Trigger: GACAGAAGAGTTCTGTGGTCCATTCTCAGCACTCCATACACTGTGTGTGCTGGCACATGCTTGCTTGCAGCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| 3UTR TCA 72 bp | CCAGCAGTACCTAGAACGTCTGTGACTTCCGGAAGATaGCATAGGTTCAACCCTCTGGACCTCAAACAATGT | + |
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Preference number: 3 (lower is better) Translates to: PAVPRTSVTSGR*HRFNPLDLKQC Trigger: ACATTGTTTGAGGTCCAGAGGGTTGAACCTATGTCATCTTCCGGAAGTCACAGACGTTCTAGGTACTGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| 3UTR TCA 72 bp | GAGCCATCAACTTTAGCCTCTGCATTAAAGACACAATaGCTTCAACGAGGCTCTCTTCATCCTCAGGCCTAT | + |
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Preference number: 3 (lower is better) Translates to: EPSTLASALKTQ*LQRGSLHPQAY Trigger: ATAGGCCTGAGGATGAAGAGAGCCTCGTTGAAGTCATTGTGTCTTTAATGCAGAGGCTAAAGTTGATGGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR CCA 90 bp | GTCTCTACCTCCCCAGTGGGGGAATCACAGGCAGGAACCACCACACCGGGCTCTGGTCCTCCTATGGGCTaGAATTTCAGAGCTCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: VSTSPVGESQAGTTTPGSGPPMG*NFRALA Trigger: CGCCAGAGCTCTGAAATTCCAGCCCATAGGAGGACC...AGAGCCCGGTGTGGTGGTTCCTGCCTGTGATTCCCCCACTGGGGAGGTAGAGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR CCA 90 bp | ACAGGCAGGAACCACCACACCGGGCTCTTGACCAGTAACTCAATCCCGGAGAATGTATGGCTCGGTGCATaGTCAGGGAAGAAGCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: TGRNHHTGLLTSNSIPENVWLGA*SGKKPG Trigger: GCCGGGCTTCTTCCCTGACCATGCACCGAGCCATAC...ATTCTCCGGGATTGAGTTACTGGTCAAGAGCCCGGTGTGGTGGTTCCTGCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR TCA 90 bp | ACAGGCAGGAACCACCACACCGGGCTCTTGACCAGTAACTCAATCCCGGAGAATCAGTCAGGGCAACAATaGGGCCGTTCCCCTCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: TGRNHHTGLLTSNSIPENQSGQQ*GRSPLC Trigger: ACACAGAGGGGAACGGCCTCATTGTTGCCCTGACTG...ATTCTCCGGGATTGAGTTACTGGTCAAGAGCCCGGTGTGGTGGTTCCTGCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR TCA 90 bp | GGGCTCTTGACCAGTAACTCAATCCCGGAGAATGCAGCTGGCTCAACCCACACAAAGGCTCTGCCACAGTaGGTGCAAGTGAAGGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: GLLTSNSIPENAAGSTHTKALPQ*VQVKGV Trigger: GACCCCCTTCACTTGCACTCACTGTGGCAGAGCCTT...TGTGTGGGTTGAGCCAGCTGCATTCTCCGGGATTGAGTTACTGGTCAAGAGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR GCA 90 bp | ACAGGCAGGAACCACCACACCGGGCTCTTGACCAGTAACTCAATCCCGGAGAATCACCCAGCAGATGAGTaGTGGTTTGGCGCCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: TGRNHHTGLLTSNSIPENHPADE*WFGASK Trigger: CTTGGAGGCGCCAAACCAGCACTCATCTGCTGGGTG...ATTCTCCGGGATTGAGTTACTGGTCAAGAGCCCGGTGTGGTGGTTCCTGCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR CCA 90 bp | TTTCTGATCTTCCTGTCTCTACCTCCCCAGTGGGGGAATCACAGGCAGGAACCAGCACATGGCCACCTCTaGATCCTGTGCACAGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: FLIFLSLPPQWGNHRQEPAHGHL*ILCTGS Trigger: GGACCCTGTGCACAGGATCCAGAGGTGGCCATGTGC...TGGTTCCTGCCTGTGATTCCCCCACTGGGGAGGTAGAGACAGGAAGATCAGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR CCA 90 bp | CACACCGGGCTCTTGACCAGTAACTCAATCCCGGAGAATGCAGCTGGCTCAACCCTTCTGTCCTGCACATaGCCACCTCTGGATCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: HTGLLTSNSIPENAAGSTLLSCT*PPLDPV Trigger: CACAGGATCCAGAGGTGGCCATGTGCAGGACAGAAG...GGTTGAGCCAGCTGCATTCTCCGGGATTGAGTTACTGGTCAAGAGCCCGGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR TCA 90 bp | TTTCTGATCTTCCTGTCTCTACCTCCCCAGTGGGGGAATCACAGGCAGGAACCAAGCGGAGCCAGCAAATaGGAGTTGTGGCTCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: FLIFLSLPPQWGNHRQEPSGASK*ELWLLL Trigger: CAGAAGGAGCCACAACTCTCATTTGCTGGCTCCGCT...TGGTTCCTGCCTGTGATTCCCCCACTGGGGAGGTAGAGACAGGAAGATCAGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR GCA 90 bp | CAAGCATGTGCCAGCACACACAGTGTATGGAGTGCTGAGAATGGACCACAGAACTGTACCACCCGCTGGTaGTCACGGAACGCAGATCTC | + |
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Preference number: 4 (lower is better) Translates to: QACASTHSVWSAENGPQNCTTRW*SRNADL Trigger: GAGATCTGCGTTCCGTGAGCACCAGCGGGTGGTACA...GTTCTGTGGTCCATTCTCAGCACTCCATACACTGTGTGTGCTGGCACATGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR GCA 90 bp | GGGCTCTTGACCAGTAACTCAATCCCGGAGAATGCAGCTGGCTCAACCCACACAGTGAGTATACATGTGTaGCACCAATGTGGACCGCTG | + |
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Preference number: 4 (lower is better) Translates to: GLLTSNSIPENAAGSTHTVSIHV*HQCGPL Trigger: CAGCGGTCCACATTGGTGGCACACATGTATACTCAC...TGTGTGGGTTGAGCCAGCTGCATTCTCCGGGATTGAGTTACTGGTCAAGAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR GCA 90 bp | CAAGCATGTGCCAGCACACACAGTGTATGGAGTGCTGAGAATGGACCACAGAACTTGTGCGAAACTGCCTaGCACATTGAGGGCAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: QACASTHSVWSAENGPQNLCETA*HIEGRG Trigger: ACCCCTGCCCTCAATGTGGCAGGCAGTTTCGCACAA...GTTCTGTGGTCCATTCTCAGCACTCCATACACTGTGTGTGCTGGCACATGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR GCA 90 bp | CAAGCATGTGCCAGCACACACAGTGTATGGAGTGCTGAGAATGGACCACAGAACGGCCGAAGCATTTGTTaGAGTCTGGGCACTGAAACG | + |
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Preference number: 4 (lower is better) Translates to: QACASTHSVWSAENGPQNGRSIC*SLGTET Trigger: CGTTTCAGTGCCCAGACTGCAACAAATGCTTCGGCC...GTTCTGTGGTCCATTCTCAGCACTCCATACACTGTGTGTGCTGGCACATGCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR TCA 90 bp | TCTCAGGTGACCCAAACTGGTCTCAAATTTCTGATCTTCCTGTCTCTACCTCCCCACAGTGAGTGCAAGTaGAGGGGGTCACACCACTGT | + |
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Preference number: 4 (lower is better) Translates to: SQVTQTGLKFLIFLSLPPHSECK*RGSHHC Trigger: ACAGTGGTGTGACCCCCTTCACTTGCACTCACTGTG...GGGAGGTAGAGACAGGAAGATCAGAAATTTGAGACCAGTTTGGGTCACCTGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR TCA 90 bp | ACCTACAAACTTGGGCCTTTGGTACATGTGATAGATACTTTGGTTTTTAAACTGCCTCCACCCAGCAGATaGGTGCTGGTTTGGCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: TYKLGPLVHVIDTLVFKLPPPSR*VLVWRL Trigger: GAGGCGCCAAACCAGCACTCATCTGCTGGGTGGAGG...CAGTTTAAAAACCAAAGTATCTATCACATGTACCAAAGGCCCAAGTTTGTAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR GCA 90 bp | TTCATTTATGTTTATATGCAGTCTCAGGTGACCCAAACTGGTCTCAAATTTCTGCGGTGTATGGCTCGGTaGATGGTCAGGGAAGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: FIYVYMQSQVTQTGLKFLRCMAR*MVREEA Trigger: GGCTTCTTCCCTGACCATGCACCGAGCCATACACCG...CAGAAATTTGAGACCAGTTTGGGTCACCTGAGACTGCATATAAACATAAATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR CCA 90 bp | ATTCATTTATGTTTATATGCAGTCTCAGGTGACCCAAACTGGTCTCAAATTTCTCCAGCAGATGAGTGCTaGTTTGGCGCCTCCAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: IHLCLYAVSGDPNWSQISPADEC*FGASKS Trigger: GGACTTGGAGGCGCCAAACCAGCACTCATCTGCTGG...AGAAATTTGAGACCAGTTTGGGTCACCTGAGACTGCATATAAACATAAATGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR TCA 90 bp | ACCTACAAACTTGGGCCTTTGGTACATGTGATAGATACTTTGGTTTTTAAACTGTTGCAGTCTGGGCACTaGAACGGCTTTTCACCTGTG | + |
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Preference number: 4 (lower is better) Translates to: TYKLGPLVHVIDTLVFKLLQSGH*NGFSPV Trigger: CACAGGTGAAAAGCCGTTTCAGTGCCCAGACTGCAA...CAGTTTAAAAACCAAAGTATCTATCACATGTACCAAAGGCCCAAGTTTGTAGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR CCA 90 bp | ATTCATTTATGTTTATATGCAGTCTCAGGTGACCCAAACTGGTCTCAAATTTCTCGGAACGCAGATCTCTaGCTGAAGCAGCGTCCACAA | + |
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Preference number: 4 (lower is better) Translates to: IHLCLYAVSGDPNWSQISRNADL*LKQRPQ Trigger: TTGTGGACGCTGCTTCAGCCAGAGATCTGCGTTCCG...AGAAATTTGAGACCAGTTTGGGTCACCTGAGACTGCATATAAACATAAATGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR CCA 90 bp | ATTCATTTATGTTTATATGCAGTCTCAGGTGACCCAAACTGGTCTCAAATTTCTGTGTGGGTCCTCCTATaGGCTGGAATTTCAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: IHLCLYAVSGDPNWSQISVWVLL*AGISEL Trigger: GAGCTCTGAAATTCCAGCCCATAGGAGGACCCACAC...AGAAATTTGAGACCAGTTTGGGTCACCTGAGACTGCATATAAACATAAATGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR TCA 90 bp | ACCTACAAACTTGGGCCTTTGGTACATGTGATAGATACTTTGGTTTTTAAACTGGGTTTTTCACCTGTGTaGGTATACATGTGTGCCACC | + |
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Preference number: 4 (lower is better) Translates to: TYKLGPLVHVIDTLVFKLGFSPV*VYMCAT Trigger: GGTGGCACACATGTATACTCACACAGGTGAAAAACC...CAGTTTAAAAACCAAAGTATCTATCACATGTACCAAAGGCCCAAGTTTGTAGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS CCA 90 bp | TTTCCTTCTCGTGCCTGCAATCTGAGTGGACTTCTGTCCTGCACATaGCCACCTCTGGATCCTGTGCACAGGGTCCCCACACTTCGGACT | + |
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Preference number: 5 (lower is better) Translates to: FPSRACNLSGLLSCT*PPLDPVHRVPTLRT Trigger: AGTCCGAAGTGTGGGGACCCTGTGCACAGGATCCAGAGGTGGCCATGTGCAGGACAGAAGTCCACTCAGATTGCAGGCACGAGAAGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS TCA 90 bp | GCCTTTAGCTCCTGGTCTATGGACCCACTGGTGGCTTGTCATAGCTaGCTTTGTGCGAAACTGCCTGCCACATTGAGGGCAGGGGTAAGG | + |
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Preference number: 5 (lower is better) Translates to: AFSSWSMDPLVACHS*LCAKLPATLRAGVR Trigger: CCTTACCCCTGCCCTCAATGTGGCAGGCAGTTTCGCACAAAGTCAGCTATGACAAGCCACCAGTGGGTCCATAGACCAGGAGCTAAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS TCA 90 bp | AGTCTCTTCTCTTGGTCTCTTCCTTTCCTTCTCGTGCCTGCAATCTaGGTGGACTTCTGTCCTGCACATGGCCACCTCTGGATCCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: SLFSWSLPFLLVPAI*VDFCPAHGHLWILC Trigger: GCACAGGATCCAGAGGTGGCCATGTGCAGGACAGAAGTCCACTCAGATTGCAGGCACGAGAAGGAAAGGAAGAGACCAAGAGAAGAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR CAA 90 bp | TTTCTGATCTTCCTGTCTCTACCTCCCCAGTGGGGGAATCACAGGCAGGAACCACGGCTGAAGGATTTGTaGCAGTCGGGGCAACAAAAT | + |
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Preference number: 5 (lower is better) Translates to: FLIFLSLPPQWGNHRQEPRLKDL*QSGQQN Trigger: ATTTTGTTGCCCCGACTGCAACAAATCCTTCAGCCG...TGGTTCCTGCCTGTGATTCCCCCACTGGGGAGGTAGAGACAGGAAGATCAGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR CAA 90 bp | TCTCAGGTGACCCAAACTGGTCTCAAATTTCTGATCTTCCTGTCTCTACCTCCCAAACTGCCTGCCACATaGAGGGCAGGGGTAAGGACG | + |
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Preference number: 5 (lower is better) Translates to: SQVTQTGLKFLIFLSLPPKLPAT*RAGVRT Trigger: CGTCCTTACCCCTGCCCTCAATGTGGCAGGCAGTTT...GGGAGGTAGAGACAGGAAGATCAGAAATTTGAGACCAGTTTGGGTCACCTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS GCA 90 bp | TTGCTTCAGTCTCTTCTCTTGGTCTCTTCCTTTCCTTCTCGTGCCTaGAATCTGAGTGGACTTCTGTCCTGCACATGGCCACCTCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: LLQSLLLVSSFPSRA*NLSGLLSCTWPPLD Trigger: ATCCAGAGGTGGCCATGTGCAGGACAGAAGTCCACTCAGATTGCAGGCACGAGAAGGAAAGGAAGAGACCAAGAGAAGAGACTGAAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS-3UTR CAA 90 bp | TCTCAGGTGACCCAAACTGGTCTCAAATTTCTGATCTTCCTGTCTCTACCTCCCAAAATGTCTTCTGCATaGCTTCAGTCTCTTCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: SQVTQTGLKFLIFLSLPPKMSSA*LQSLLL Trigger: CAAGAGAAGAGACTGAAGCAATGCAGAAGACATTTT...GGGAGGTAGAGACAGGAAGATCAGAAATTTGAGACCAGTTTGGGTCACCTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS GCA 72 bp | GTGAAGGGGGTCACACCACTGTGTACCACCCGCTGGTaGTCACGGAACGCAGATCTCTGGCTGAAGCAGCGT | + |
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Preference number: 6 (lower is better) Translates to: VKGVTPLCTTRW*SRNADLWLKQR Trigger: ACGCTGCTTCAGCCAGAGATCTGCGTTCCGTGAGCACCAGCGGGTGGTACACAGTGGTGTGACCCCCTTCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS CCA 72 bp | CAAGTGAAGGGGGTCACACCACTGTGTACCACCCGCTaGTGCTCACGGAACGCAGATCTCTGGCTGAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: QVKGVTPLCTTR*CSRNADLWLKQ Trigger: CTGCTTCAGCCAGAGATCTGCGTTCCGTGAGCACCAGCGGGTGGTACACAGTGGTGTGACCCCCTTCACTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS TCA 72 bp | CCACCCGCTGGTGCTCACGGAACGCAGATCTCTGGCTaGAGCAGCGTCCACAATCAGCACAACAGTAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: PPAGAHGTQISG*SSVHNQHNSKA Trigger: AGCCTTACTGTTGTGCTGATTGTGGACGCTGCTTCAGCCAGAGATCTGCGTTCCGTGAGCACCAGCGGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS TCA 72 bp | TGGAATCCGCAAAGGCTCTGCCACAGTGAGTGCAAGTaGAGGGGGTCACACCACTGTGTACCACCCGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: WNPQRLCHSECK*RGSHHCVPPAG Trigger: ACCAGCGGGTGGTACACAGTGGTGTGACCCCCTTCACTTGCACTCACTGTGGCAGAGCCTTTGCGGATTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS GCA 72 bp | GCATGGTCAGGGAAGAAGCCCGGCCGAAGCATTTGTTaGAGTCTGGGCACTGAAACGGCTTTTCACCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: AWSGKKPGRSIC*SLGTETAFHLC Trigger: ACACAGGTGAAAAGCCGTTTCAGTGCCCAGACTGCAACAAATGCTTCGGCCGGGCTTCTTCCCTGACCATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS TCA 72 bp | TCTTGGTCTCTTCCTTTCCTTCTCGTGCCTGCAATCTaGGTGGACTTCTGTCCTGCACATGGCCACCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SWSLPFLLVPAI*VDFCPAHGHLW Trigger: CCAGAGGTGGCCATGTGCAGGACAGAAGTCCACTCAGATTGCAGGCACGAGAAGGAAAGGAAGAGACCAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS TCA 72 bp | GTATGGCCCGGTGAGAGCTCAGGGAAGAAGACCGGCTaGAGGATTTGTTGCAGTCGGGGCAACAAAATGGTT | + |
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Preference number: 6 (lower is better) Translates to: VWPGESSGKKTG*RICCSRGNKMV Trigger: AACCATTTTGTTGCCCCGACTGCAACAAATCCTTCAGCCGGTCTTCTTCCCTGAGCTCTCACCGGGCCATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS GCA 72 bp | CTAGCGGAGCCAGCAAATGAGAGTTGTGGCTCCTTCTaGCCAGGTTCTGGAGAAAATGTCTTCTGCATTGCT | + |
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Preference number: 6 (lower is better) Translates to: LAEPANESCGSF*PGSGENVFCIA Trigger: AGCAATGCAGAAGACATTTTCTCCAGAACCTGGGCAGAAGGAGCCACAACTCTCATTTGCTGGCTCCGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS CCA 72 bp | TTATGGCCTTTAGCTCCTGGTCTATGGACCCACTGGTaGCTTGTCATAGCTGACTTTGTGCGAAACTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LWPLAPGLWTHW*LVIADFVRNCL Trigger: CAGGCAGTTTCGCACAAAGTCAGCTATGACAAGCCACCAGTGGGTCCATAGACCAGGAGCTAAAGGCCATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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| CDS CCA 72 bp | TCCTTATGGCCTTTAGCTCCTGGTCTATGGACCCACTaGTGGCTTGTCATAGCTGACTTTGTGCGAAACTGC | + |
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Preference number: 6 (lower is better) Translates to: SLWPLAPGLWTH*WLVIADFVRNC Trigger: GCAGTTTCGCACAAAGTCAGCTATGACAAGCCACCAGTGGGTCCATAGACCAGGAGCTAAAGGCCATAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059199.7 |
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