Pregenerated sensors for ZFP763 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067430Ensembl transcript IDs: ENSMUST00000087654.5
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTAAATTTGGGGGATTAATTTTCTATTTCTACCATATGGGTCCCTaGGACGGAACTCAGATTCTCAAGCTTAGTAACAAGCACCTTTAC | + |
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Preference number: 1 (lower is better) Translates to: GKFGGLIFYFYHMGP*DGTQILKLSNKHLY Trigger: GTAAAGGTGCTTGTTACTAAGCTTGAGAATCTGAGTTCCGTCCCAGGGACCCATATGGTAGAAATAGAAAATTAATCCCCCAAATTTACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| 3UTR GCA 90 bp | CATCCTACCATGCCCAGTGCCATAGGATTTTATCCTATATATGCTTaGATATCAGGGATACAACTAACTTCTGAAAATTTCAATTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: HPTMPSAIGFYPIYA*ISGIQLTSENFNCS Trigger: AGAACAATTGAAATTTTCAGAAGTTAGTTGTATCCCTGATATGCAAGCATATATAGGATAAAATCCTATGGCACTGGGCATGGTAGGATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| 3UTR-3UTR CCA 90 bp | AGTGCCATAGGATTTTATCCTATATATGCTTGCATATCAGGGATACAACTAACTGTCCACATGTATACATaGAATTCAGAGGTAAATTTG | + |
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Preference number: 2 (lower is better) Translates to: SAIGFYPIYACISGIQLTVHMYT*NSEVNL Trigger: CAAATTTACCTCTGAATTCCATGTATACATGTGGAC...AGTTAGTTGTATCCCTGATATGCAAGCATATATAGGATAAAATCCTATGGCACT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| 3UTR CCA 72 bp | GGGGGATTAATTTTCTATTTCTACCATATGGGTCCCTaGGACGGAACTCAGATTCTCAAGCTTAGTAACAAG | + |
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Preference number: 3 (lower is better) Translates to: GGLIFYFYHMGP*DGTQILKLSNK Trigger: CTTGTTACTAAGCTTGAGAATCTGAGTTCCGTCCCAGGGACCCATATGGTAGAAATAGAAAATTAATCCCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| 3UTR-3UTR CAA 90 bp | GAACCAGGAAATATAGGCAGGCAAAATCATGACATTATTCACCAAATCTTCTATTTTACTATCCCCACCTaGCCCAGTGCTAGAATAAAA | + |
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Preference number: 3 (lower is better) Translates to: EPGNIGRQNHDIIHQIFYFTIPT*PSARIK Trigger: TTTTATTCTAGCACTGGGCAAGGTGGGGATAGTAAA...ATAGAAGATTTGGTGAATAATGTCATGATTTTGCCTGCCTATATTTCCTGGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| 3UTR TCA 72 bp | AGTCTACTGTTTTATTACAAATGTATCTCAGTTCAGTaGCTCCAACAGCTCTACAGTAAAGTAGAAAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: SLLFYYKCISVQ*LQQLYSKVEKA Trigger: TGCTTTTTCTACTTTACTGTAGAGCTGTTGGAGTCACTGAACTGAGATACATTTGTAATAAAACAGTAGACT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR TCA 90 bp | ATGCTGAGACAAACTCAGGCCCCCTGGCAGAGCAGCATGGGCTCTGAACAGCTGGGGTACTGGAATGGGTaGAGGCTTTCCCACAATGCT | + |
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Preference number: 4 (lower is better) Translates to: MLRQTQAPWQSSMGSEQLGYWNG*RLSHNA Trigger: AGCATTGTGGGAAAGCCTTCACCCATTCCAGTACCC...CAGCTGTTCAGAGCCCATGCTGCTCTGCCAGGGGGCCTGAGTTTGTCTCAGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR TCA 90 bp | ATGCTGAGACAAACTCAGGCCCCCTGGCAGAGCAGCATGGGCTCTGAACAGCTGACGCCTTCCGTTGAATaGAGGCTTTCCCACAATGCT | + |
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Preference number: 4 (lower is better) Translates to: MLRQTQAPWQSSMGSEQLTPSVE*RLSHNA Trigger: AGCATTGTGGGAAAGCCTTCATTCAACGGAAGGCGT...CAGCTGTTCAGAGCCCATGCTGCTCTGCCAGGGGGCCTGAGTTTGTCTCAGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR GCA 90 bp | TTGATGCTGAGACAAACTCAGGCCCCCTGGCAGAGCAGCATGGGCTCTGAACAGGAGTCCTTTCATGGTTaGGAAGGCATGTGGACCATG | + |
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Preference number: 4 (lower is better) Translates to: LMLRQTQAPWQSSMGSEQESFHG*EGMWTM Trigger: CATGGTCCACATGCCTTCGCAACCATGAAAGGACTC...CTGTTCAGAGCCCATGCTGCTCTGCCAGGGGGCCTGAGTTTGTCTCAGCATCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR GCA 90 bp | TTGATGCTGAGACAAACTCAGGCCCCCTGGCAGAGCAGCATGGGCTCTGAACAGCTCTTGCCCACACATTaGTTTCATACACTGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: LMLRQTQAPWQSSMGSEQLLPTH*FHTLLL Trigger: CAACAGCAGTGTATGAAAGCAATGTGTGGGCAAGAG...CTGTTCAGAGCCCATGCTGCTCTGCCAGGGGGCCTGAGTTTGTCTCAGCATCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR TCA 90 bp | CAGCTCTTCTCTGTCAGCTCTTTTGTGTGTATAAAGGAATGTGGAACACATAAAACACGTGAAGGGGAGTaGGCACGGATGCCTCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: QLFSVSSFVCIKECGTHKTREGE*ARMPLA Trigger: GGCAAGAGGCATCCGTGCTCACTCCCCTTCACGTGT...TTTATGTGTTCCACATTCCTTTATACACACAAAAGAGCTGACAGAGAAGAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR TCA 90 bp | TCTCTACTCTTTACTATCCCCACCTTGCCCAGTGCTAGAATAAAAGGCACATCCATGGACAAGAAGGTGTaGGGAACGAACAAAGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: SLLFTIPTLPSARIKGTSMDKKV*GTNKGF Trigger: AAAGCCTTTGTTCGTTCCTCACACCTTCTTGTCCAT...GGATGTGCCTTTTATTCTAGCACTGGGCAAGGTGGGGATAGTAAAGAGTAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR GCA 90 bp | TCTCTACTCTTTACTATCCCCACCTTGCCCAGTGCTAGAATAAAAGGCACATCCAAGGCTTCCCCACATTaGTTACACATAAATGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SLLFTIPTLPSARIKGTSKASPH*LHINGF Trigger: GAAGCCATTTATGTGTAAGCAATGTGGGGAAGCCTT...GGATGTGCCTTTTATTCTAGCACTGGGCAAGGTGGGGATAGTAAAGAGTAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR TCA 90 bp | AGTGCCATAGGATTTTATCCTATATATGCTTGCATATCAGGGATACAACTAACTTGTGAGATGCACACGTaGAGGGGAGTGAGCACGGAT | + |
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Preference number: 4 (lower is better) Translates to: SAIGFYPIYACISGIQLTCEMHT*RGVSTD Trigger: ATCCGTGCTCACTCCCCTTCACGTGTGCATCTCACA...AGTTAGTTGTATCCCTGATATGCAAGCATATATAGGATAAAATCCTATGGCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR TCA 90 bp | GAATTCAGAGGTAAATTTGGGGGATTAATTTTCTATTTCTACCATATGGGTCCCAGGCACTGTGATGACTaGAGGCTTTCCCACAATGCT | + |
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Preference number: 4 (lower is better) Translates to: EFRGKFGGLIFYFYHMGPRHCDD*RLSHNA Trigger: AGCATTGTGGGAAAGCCTTCAGTCATCACAGTGCCT...GGGACCCATATGGTAGAAATAGAAAATTAATCCCCCAAATTTACCTCTGAATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR GCA 90 bp | ATGCCCAGTGCCATAGGATTTTATCCTATATATGCTTGCATATCAGGGATACAAAGCACGGATGCCTCTTaGCCACACATTGCTTTCATA | + |
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Preference number: 4 (lower is better) Translates to: MPSAIGFYPIYACISGIQSTDAS*PHIAFI Trigger: TATGAAAGCAATGTGTGGGCAAGAGGCATCCGTGCT...TTGTATCCCTGATATGCAAGCATATATAGGATAAAATCCTATGGCACTGGGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR CCA 90 bp | CAGCTCTTCTCTGTCAGCTCTTTTGTGTGTATAAAGGAATGTGGAACACATAAAAGAGCTTCTTTTGACTaGAATCCAACAGAGCCCACT | + |
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Preference number: 4 (lower is better) Translates to: QLFSVSSFVCIKECGTHKRASFD*NPTEPT Trigger: AGTGGGCTCTGTTGGATTCCAGTCAAAAGAAGCTCT...TTTATGTGTTCCACATTCCTTTATACACACAAAAGAGCTGACAGAGAAGAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR TCA 90 bp | CAGCTCTTCTCTGTCAGCTCTTTTGTGTGTATAAAGGAATGTGGAACACATAAATTTCTCCCAATCATCTaGGTTCTCAGACTTCTGACA | + |
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Preference number: 4 (lower is better) Translates to: QLFSVSSFVCIKECGTHKFLPII*VLRLLT Trigger: TGTCAGAAGTCTGAGAACTCAGATGATTGGGAGAAA...TTTATGTGTTCCACATTCCTTTATACACACAAAAGAGCTGACAGAGAAGAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR TCA 90 bp | AGTGCCATAGGATTTTATCCTATATATGCTTGCATATCAGGGATACAACTAACTAGGGCTCAGAAGAAGTaGCATCTGCATAACGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: SAIGFYPIYACISGIQLTRAQKK*HLHNVS Trigger: AGACACGTTATGCAGATGTCACTTCTTCTGAGCCCT...AGTTAGTTGTATCCCTGATATGCAAGCATATATAGGATAAAATCCTATGGCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR GCA 90 bp | GAATTCAGAGGTAAATTTGGGGGATTAATTTTCTATTTCTACCATATGGGTCCCATTGCTTTCATACACTaGTGTTGCAGAAGGCATGCC | + |
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Preference number: 4 (lower is better) Translates to: EFRGKFGGLIFYFYHMGPIAFIH*CCRRHA Trigger: GGCATGCCTTCTGCAACAGCAGTGTATGAAAGCAAT...GGGACCCATATGGTAGAAATAGAAAATTAATCCCCCAAATTTACCTCTGAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR TCA 90 bp | GAATTCAGAGGTAAATTTGGGGGATTAATTTTCTATTTCTACCATATGGGTCCCTGGGCTTCTCCACGCTaGAAGCTATCTTCATATTTA | + |
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Preference number: 4 (lower is better) Translates to: EFRGKFGGLIFYFYHMGPWASPR*KLSSYL Trigger: TAAATATGAAGATAGCTTTCAGCGTGGAGAAGCCCA...GGGACCCATATGGTAGAAATAGAAAATTAATCCCCCAAATTTACCTCTGAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR CCA 90 bp | ATGCCCAGTGCCATAGGATTTTATCCTATATATGCTTGCATATCAGGGATACAATTGCTTACACATAAATaGCTTCACTCTAGTGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: MPSAIGFYPIYACISGIQLLTHK*LHSSVE Trigger: CTCCACACTAGAGTGAAGCCATTTATGTGTAAGCAA...TTGTATCCCTGATATGCAAGCATATATAGGATAAAATCCTATGGCACTGGGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR TCA 90 bp | AGTGCCATAGGATTTTATCCTATATATGCTTGCATATCAGGGATACAACTAACTGATGACTGGAATGAATaGATGCCTTGCCACACTTTT | + |
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Preference number: 4 (lower is better) Translates to: SAIGFYPIYACISGIQLTDDWNE*MPCHTF Trigger: AAAAGTGTGGCAAGGCATTCATTCATTCCAGTCATC...AGTTAGTTGTATCCCTGATATGCAAGCATATATAGGATAAAATCCTATGGCACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR GCA 90 bp | GAATTCAGAGGTAAATTTGGGGGATTAATTTTCTATTTCTACCATATGGGTCCCAGAAGAAGTGACATCTaGATAACGTGTCTCATACTG | + |
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Preference number: 4 (lower is better) Translates to: EFRGKFGGLIFYFYHMGPRRSDI*ITCLIL Trigger: CAGTATGAGACACGTTATGCAGATGTCACTTCTTCT...GGGACCCATATGGTAGAAATAGAAAATTAATCCCCCAAATTTACCTCTGAATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR CCA 90 bp | CACGCTTACATCACCTCAATGCAAATGTTTCTTTATATGGATGTGATTGTATTGGTTAACAACATATTCTaGAATTCGGTGGTGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: HAYITSMQMFLYMDVIVLVNNIF*NSVVGF Trigger: GAAGCCCACCACCGAATTCCAGAATATGTTGTTAAC...CAATACAATCACATCCATATAAAGAAACATTTGCATTGAGGTGATGTAAGCGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR CCA 90 bp | ATGCCCAGTGCCATAGGATTTTATCCTATATATGCTTGCATATCAGGGATACAATTCCTTATTCTCAAATaGTTTCGCTCCAGTTTCATC | + |
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Preference number: 4 (lower is better) Translates to: MPSAIGFYPIYACISGIQFLILK*FRSSFI Trigger: GATGAAACTGGAGCGAAACCATTTGAGAATAAGGAA...TTGTATCCCTGATATGCAAGCATATATAGGATAAAATCCTATGGCACTGGGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR TCA 90 bp | AGTGCCATAGGATTTTATCCTATATATGCTTGCATATCAGGGATACAACTAACTGGTAGCTACAATCACTaGATGCTTTCCCACATTTTT | + |
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Preference number: 4 (lower is better) Translates to: SAIGFYPIYACISGIQLTGSYNH*MLSHIF Trigger: AAAAATGTGGGAAAGCATTCAGTGATTGTAGCTACC...AGTTAGTTGTATCCCTGATATGCAAGCATATATAGGATAAAATCCTATGGCACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR CCA 90 bp | AGTGCCATAGGATTTTATCCTATATATGCTTGCATATCAGGGATACAACTAACTGATAAACTATCTCTCTaGGACCTTCTAGTATGTGAG | + |
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Preference number: 4 (lower is better) Translates to: SAIGFYPIYACISGIQLTDKLSL*DLLVCE Trigger: CTCACATACTAGAAGGTCCCAGAGAGATAGTTTATC...AGTTAGTTGTATCCCTGATATGCAAGCATATATAGGATAAAATCCTATGGCACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR GCA 90 bp | GAACCAGGAAATATAGGCAGGCAAAATCATGACATTATTCACCAAATCTTCTATACTGGAATGAATGAATaGCTTGCCACACTTTTTACA | + |
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Preference number: 4 (lower is better) Translates to: EPGNIGRQNHDIIHQIFYTGMNE*LATLFT Trigger: TGTAAAAAGTGTGGCAAGGCATTCATTCATTCCAGT...ATAGAAGATTTGGTGAATAATGTCATGATTTTGCCTGCCTATATTTCCTGGTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR CAA 90 bp | ATGCTGAGACAAACTCAGGCCCCCTGGCAGAGCAGCATGGGCTCTGAACAGCTGGTGACACGCCTTCCGTaGAATGAAGGCTTTCCCACA | + |
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Preference number: 5 (lower is better) Translates to: MLRQTQAPWQSSMGSEQLVTRLP*NEGFPT Trigger: TGTGGGAAAGCCTTCATTCAACGGAAGGCGTGTCAC...CAGCTGTTCAGAGCCCATGCTGCTCTGCCAGGGGGCCTGAGTTTGTCTCAGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR CAA 90 bp | TTGATGCTGAGACAAACTCAGGCCCCCTGGCAGAGCAGCATGGGCTCTGAACAGTTTCATACACTGCTGTaGCAGAAGGCATGCCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: LMLRQTQAPWQSSMGSEQFHTLL*QKACPC Trigger: ACAAGGGCATGCCTTCTGCAACAGCAGTGTATGAAA...CTGTTCAGAGCCCATGCTGCTCTGCCAGGGGGCCTGAGTTTGTCTCAGCATCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR CAA 90 bp | ATGCTGAGACAAACTCAGGCCCCCTGGCAGAGCAGCATGGGCTCTGAACAGCTGAAAGGCTTCCCCACATaGCTTACACATAAATGGCTT | + |
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Preference number: 5 (lower is better) Translates to: MLRQTQAPWQSSMGSEQLKGFPT*LTHKWL Trigger: AAGCCATTTATGTGTAAGCAATGTGGGGAAGCCTTT...CAGCTGTTCAGAGCCCATGCTGCTCTGCCAGGGGGCCTGAGTTTGTCTCAGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS GCA 90 bp | GGAGTGAGCACGGATGCCTCTTGCCCACACATTGCTTTCATACACTaGTGTTGCAGAAGGCATGCCCTTGTTAACAACATATTCTGGAAT | + |
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Preference number: 5 (lower is better) Translates to: GVSTDASCPHIAFIH*CCRRHALVNNIFWN Trigger: ATTCCAGAATATGTTGTTAACAAGGGCATGCCTTCTGCAACAGCAGTGTATGAAAGCAATGTGTGGGCAAGAGGCATCCGTGCTCACTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR CAA 90 bp | TCTCTACTCTTTACTATCCCCACCTTGCCCAGTGCTAGAATAAAAGGCACATCCCCTCTTGCCCACACATaGCTTTCATACACTGCTGTT | + |
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Preference number: 5 (lower is better) Translates to: SLLFTIPTLPSARIKGTSPLAHT*LSYTAV Trigger: AACAGCAGTGTATGAAAGCAATGTGTGGGCAAGAGG...GGATGTGCCTTTTATTCTAGCACTGGGCAAGGTGGGGATAGTAAAGAGTAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR CAA 90 bp | AGTGCCATAGGATTTTATCCTATATATGCTTGCATATCAGGGATACAACTAACTCGTTGGATGAAGGATTaGCCACACTGCTTACATGCG | + |
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Preference number: 5 (lower is better) Translates to: SAIGFYPIYACISGIQLTRWMKD*PHCLHA Trigger: CGCATGTAAGCAGTGTGGCAAATCCTTCATCCAACG...AGTTAGTTGTATCCCTGATATGCAAGCATATATAGGATAAAATCCTATGGCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR CAA 90 bp | CAGCTCTTCTCTGTCAGCTCTTTTGTGTGTATAAAGGAATGTGGAACACATAAATTCATGGTAGACAAGTaGGCTGAAATGAACAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: QLFSVSSFVCIKECGTHKFMVDK*AEMNKG Trigger: GCCTTTGTTCATTTCAGCCAACTTGTCTACCATGAA...TTTATGTGTTCCACATTCCTTTATACACACAAAAGAGCTGACAGAGAAGAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR CAA 90 bp | AGTGCCATAGGATTTTATCCTATATATGCTTGCATATCAGGGATACAACTAACTTCTGTAGAGCTTCTTTaGACTGGAATCCAACAGAGC | + |
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Preference number: 5 (lower is better) Translates to: SAIGFYPIYACISGIQLTSVELL*TGIQQS Trigger: GCTCTGTTGGATTCCAGTCAAAAGAAGCTCTACAGA...AGTTAGTTGTATCCCTGATATGCAAGCATATATAGGATAAAATCCTATGGCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS-3UTR CAA 90 bp | ATGCCCAGTGCCATAGGATTTTATCCTATATATGCTTGCATATCAGGGATACAAATTAGGCTGTTTCTTTaGATAAACTATCTCTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: MPSAIGFYPIYACISGIQIRLFL*INYLSG Trigger: CCCAGAGAGATAGTTTATCAAAAGAAACAGCCTAAT...TTGTATCCCTGATATGCAAGCATATATAGGATAAAATCCTATGGCACTGGGCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS GCA 72 bp | AAGGGGAGTGAGCACGGATGCCTCTTGCCCACACATTaGTTTCATACACTGCTGTTGCAGAAGGCATGCCCT | + |
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Preference number: 6 (lower is better) Translates to: KGSEHGCLLPTH*FHTLLLQKACP Trigger: AGGGCATGCCTTCTGCAACAGCAGTGTATGAAAGCAATGTGTGGGCAAGAGGCATCCGTGCTCACTCCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS TCA 72 bp | CCAGTTTCATCTGTGAGATGCACACGTGAAGGGGAGTaGGCACGGATGCCTCTTGCCCACACATTGCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: PVSSVRCTREGE*ARMPLAHTLLS Trigger: TGAAAGCAATGTGTGGGCAAGAGGCATCCGTGCTCACTCCCCTTCACGTGTGCATCTCACAGATGAAACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS CCA 72 bp | TGTTGCAGAAGGCATGCCCTTGTTAACAACATATTCTaGAATTCGGTGGTGGGCTTCTCCACGCTGAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: CCRRHALVNNIF*NSVVGFSTLKA Trigger: AGCTTTCAGCGTGGAGAAGCCCACCACCGAATTCCAGAATATGTTGTTAACAAGGGCATGCCTTCTGCAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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| CDS GCA 72 bp | ACGGATGCCTCTTGCCCACACATTGCTTTCATACACTaGTGTTGCAGAAGGCATGCCCTTGTTAACAACATA | + |
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Preference number: 6 (lower is better) Translates to: TDASCPHIAFIH*CCRRHALVNNI Trigger: TATGTTGTTAACAAGGGCATGCCTTCTGCAACAGCAGTGTATGAAAGCAATGTGTGGGCAAGAGGCATCCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087654.5 |
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