Pregenerated sensors for ZFP760 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067928Ensembl transcript IDs: ENSMUST00000073312.7
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGCACACAATGACAGAATTCTCTCTGGGACTGTAACACTGCCATaGACTAGTATAGTTTTCAAAAGGTCATCAAGCAGAGAGGCCTTG | + |
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Preference number: 1 (lower is better) Translates to: QAHNDRILSGTVTLP*TSIVFKRSSSREAL Trigger: CAAGGCCTCTCTGCTTGATGACCTTTTGAAAACTATACTAGTTCATGGCAGTGTTACAGTCCCAGAGAGAATTCTGTCATTGTGTGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| 3UTR-3UTR TCA 90 bp | GATTCCAAGACAGGATTCTGCTCAGGTTACCATGGCTTTTTACATAGTGAACCAATCTGCATGAAGACGTaGCCCAGGGAGACTCTAAAT | + |
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Preference number: 2 (lower is better) Translates to: DSKTGFCSGYHGFLHSEPICMKT*PRETLN Trigger: ATTTAGAGTCTCCCTGGGTCACGTCTTCATGCAGAT...TGGTTCACTATGTAAAAAGCCATGGTAACCTGAGCAGAATCCTGTCTTGGAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| 3UTR-3UTR TCA 90 bp | TTTCAAAAGGTCATCAAGCAGAGAGGCCTTGGTCTGTGCAGCATCTGCATGAAGTCTGGTTTGAATTTCTaGCTACATTTTGTCCTCATG | + |
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Preference number: 2 (lower is better) Translates to: FQKVIKQRGLGLCSICMKSGLNF*LHFVLM Trigger: CATGAGGACAAAATGTAGTCAGAAATTCAAACCAGA...CTTCATGCAGATGCTGCACAGACCAAGGCCTCTCTGCTTGATGACCTTTTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| 3UTR-3UTR TCA 90 bp | TTTCAAAGAAAGCCAAGGTGTGAGTTTCATGGTACACATTGTTCAATACAACTATGTGCAGCATCTGCATaGAGACGTGACCCAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: FQRKPRCEFHGTHCSIQLCAASA*RRDPGR Trigger: TCTCCCTGGGTCACGTCTTCATGCAGATGCTGCACA...TAGTTGTATTGAACAATGTGTACCATGAAACTCACACCTTGGCTTTCTTTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| 3UTR-3UTR GCA 90 bp | ACTAGTATAGTTTTCAAAAGGTCATCAAGCAGAGAGGCCTTGGTCTGTGCAGCAGAAAACCAATTTTCCTaGACATTCTTTGGGACTTCC | + |
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Preference number: 2 (lower is better) Translates to: TSIVFKRSSSREALVCAAENQFS*TFFGTS Trigger: GGAAGTCCCAAAGAATGTGCAGGAAAATTGGTTTTC...TGCTGCACAGACCAAGGCCTCTCTGCTTGATGACCTTTTGAAAACTATACTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| 3UTR-3UTR TCA 90 bp | GATTCCAAGACAGGATTCTGCTCAGGTTACCATGGCTTTTTACATAGTGAACCACGTTTCCCTTCAGGATaGATTTTCAGATGTATCTAC | + |
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Preference number: 2 (lower is better) Translates to: DSKTGFCSGYHGFLHSEPRFPSG*IFRCIY Trigger: GTAGATACATCTGAAAATTCATCCTGAAGGGAAACG...TGGTTCACTATGTAAAAAGCCATGGTAACCTGAGCAGAATCCTGTCTTGGAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| 3UTR-3UTR CCA 90 bp | CTATTGACCATTTTCAAAGAAAGCCAAGGTGTGAGTTTCATGGTACACATTGTTGTCGGTCTAGATAGTTaGACTCACCAGATGGTTAGC | + |
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Preference number: 2 (lower is better) Translates to: LLTIFKESQGVSFMVHIVVGLDS*THQMVS Trigger: GCTAACCATCTGGTGAGTCCAACTATCTAGACCGAC...AACAATGTGTACCATGAAACTCACACCTTGGCTTTCTTTGAAAATGGTCAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| 3UTR-3UTR CCA 90 bp | CTATTGACCATTTTCAAAGAAAGCCAAGGTGTGAGTTTCATGGTACACATTGTTTTCCTGCACATTCTTTaGGACTTCCAGGCTATGCAT | + |
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Preference number: 2 (lower is better) Translates to: LLTIFKESQGVSFMVHIVFLHIL*DFQAMH Trigger: ATGCATAGCCTGGAAGTCCCAAAGAATGTGCAGGAA...AACAATGTGTACCATGAAACTCACACCTTGGCTTTCTTTGAAAATGGTCAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| 3UTR CAA 90 bp | AAGAGGGATGTTACTTTACTAAAATATGGAAACCTACAGTTACTATaGACCATTTTCAAAGAAAGCCAAGGTGTGAGTTTCATGGTACAC | + |
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Preference number: 2 (lower is better) Translates to: KRDVTLLKYGNLQLL*TIFKESQGVSFMVH Trigger: GTGTACCATGAAACTCACACCTTGGCTTTCTTTGAAAATGGTCAATAGTAACTGTAGGTTTCCATATTTTAGTAAAGTAACATCCCTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| 3UTR-3UTR GCA 90 bp | TTTCAAAGAAAGCCAAGGTGTGAGTTTCATGGTACACATTGTTCAATACAACTAATTAAAGGAGATTCTTaGGTTTCCCTTCAGGATGAA | + |
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Preference number: 2 (lower is better) Translates to: FQRKPRCEFHGTHCSIQLIKGDS*VSLQDE Trigger: TTCATCCTGAAGGGAAACGCAAGAATCTCCTTTAAT...TAGTTGTATTGAACAATGTGTACCATGAAACTCACACCTTGGCTTTCTTTGAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| 3UTR-3UTR CCA 90 bp | CTATTGACCATTTTCAAAGAAAGCCAAGGTGTGAGTTTCATGGTACACATTGTTATTCCTTTACGCATTTaGTTTCCTTCTTTGCAATAC | + |
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Preference number: 2 (lower is better) Translates to: LLTIFKESQGVSFMVHIVIPLRI*FPSLQY Trigger: GTATTGCAAAGAAGGAAACCAAATGCGTAAAGGAAT...AACAATGTGTACCATGAAACTCACACCTTGGCTTTCTTTGAAAATGGTCAATAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| 3UTR-3UTR CAA 90 bp | TGCTCATACATCATACACGTGTTCCTCCTGCAAAATAAAACTCATCTCCATTTGTCAAGCAGAGAGGCCTaGGTCTGTGCAGCATCTGCA | + |
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Preference number: 3 (lower is better) Translates to: CSYIIHVFLLQNKTHLHLSSREA*VCAASA Trigger: TGCAGATGCTGCACAGACCAAGGCCTCTCTGCTTGA...CAAATGGAGATGAGTTTTATTTTGCAGGAGGAACACGTGTATGATGTATGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| 3UTR CCA 72 bp | TTATTGAGATCCCCCTGTGTCTGCCTATTGAAGACTTaGATAGCCCTTTTCCCTTCCTATTGCTCATACATC | + |
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Preference number: 3 (lower is better) Translates to: LLRSPCVCLLKT*IALFPSYCSYI Trigger: GATGTATGAGCAATAGGAAGGGAAAAGGGCTATCCAAGTCTTCAATAGGCAGACACAGGGGGATCTCAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| 3UTR GCA 72 bp | CTATTGAAGACTTGGATAGCCCTTTTCCCTTCCTATTaGTCATACATCATACACGTGTTCCTCCTGCAAAAT | + |
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Preference number: 3 (lower is better) Translates to: LLKTWIALFPSY*SYIIHVFLLQN Trigger: ATTTTGCAGGAGGAACACGTGTATGATGTATGAGCAATAGGAAGGGAAAAGGGCTATCCAAGTCTTCAATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| 3UTR-3UTR CAA 90 bp | CTATTGACCATTTTCAAAGAAAGCCAAGGTGTGAGTTTCATGGTACACATTGTTAGGCAGCAAGCTACATaGCCTGTAAGGTACCATGAT | + |
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Preference number: 3 (lower is better) Translates to: LLTIFKESQGVSFMVHIVRQQAT*PVRYHD Trigger: ATCATGGTACCTTACAGGCAATGTAGCTTGCTGCCT...AACAATGTGTACCATGAAACTCACACCTTGGCTTTCTTTGAAAATGGTCAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| 3UTR CCA 72 bp | TTGAGTACAGGAAAACCAATTTTCCTGCACATTCTTTaGGACTTCCAGGCTATGCATGTACATGTATCACAT | + |
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Preference number: 3 (lower is better) Translates to: LSTGKPIFLHIL*DFQAMHVHVSH Trigger: ATGTGATACATGTACATGCATAGCCTGGAAGTCCCAAAGAATGTGCAGGAAAATTGGTTTTCCTGTACTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| 3UTR TCA 72 bp | AATGACAGAATTCTCTCTGGGACTGTAACACTGCCATaGACTAGTATAGTTTTCAAAAGGTCATCAAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: NDRILSGTVTLP*TSIVFKRSSSR Trigger: TCTGCTTGATGACCTTTTGAAAACTATACTAGTTCATGGCAGTGTTACAGTCCCAGAGAGAATTCTGTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| 3UTR GCA 72 bp | CTTCCTATTGCTCATACATCATACACGTGTTCCTCCTaGAAAATAAAACTCATCTCCATTTGTGTTACAGTA | + |
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Preference number: 3 (lower is better) Translates to: LPIAHTSYTCSS*KIKLISICVTV Trigger: TACTGTAACACAAATGGAGATGAGTTTTATTTTGCAGGAGGAACACGTGTATGATGTATGAGCAATAGGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR TCA 90 bp | GAGAGGCCTTGGTCTGTGCAGCATCTGCATGAAGACGTGACCCAGGGAGACTCTCATGGAGAGGATTCATaGACCATTTTGCCAAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: ERPWSVQHLHEDVTQGDSHGEDS*TILPSS Trigger: AGAGCTTGGCAAAATGGTTCATGAATCCTCTCCATG...AGAGTCTCCCTGGGTCACGTCTTCATGCAGATGCTGCACAGACCAAGGCCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR CCA 90 bp | GAGAGGCCTTGGTCTGTGCAGCATCTGCATGAAGACGTGACCCAGGGAGACTCTAGGCCTGACAACCAATaGAAGAACTTACCACATTCT | + |
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Preference number: 4 (lower is better) Translates to: ERPWSVQHLHEDVTQGDSRPDNQ*KNLPHS Trigger: AGAATGTGGTAAGTTCTTCCATTGGTTGTCAGGCCT...AGAGTCTCCCTGGGTCACGTCTTCATGCAGATGCTGCACAGACCAAGGCCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR CCA 90 bp | GAGAGGCCTTGGTCTGTGCAGCATCTGCATGAAGACGTGACCCAGGGAGACTCTCTAAGAGCTGTGCAATaGGTAAAGGATTTGTCGCAT | + |
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Preference number: 4 (lower is better) Translates to: ERPWSVQHLHEDVTQGDSLRAVQ*VKDLSH Trigger: ATGCGACAAATCCTTTACCCATTGCACAGCTCTTAG...AGAGTCTCCCTGGGTCACGTCTTCATGCAGATGCTGCACAGACCAAGGCCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR CCA 90 bp | GAGAGGCCTTGGTCTGTGCAGCATCTGCATGAAGACGTGACCCAGGGAGACTCTGGCTTCTCTCTAGTGTaGACTCTGAAATGTTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: ERPWSVQHLHEDVTQGDSGFSLV*TLKCSL Trigger: TAAAGAACATTTCAGAGTCCACACTAGAGAGAAGCC...AGAGTCTCCCTGGGTCACGTCTTCATGCAGATGCTGCACAGACCAAGGCCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR TCA 90 bp | GAGAGGCCTTGGTCTGTGCAGCATCTGCATGAAGACGTGACCCAGGGAGACTCTGTACACTATTATGTCTaGTTAGGGATGATTCAATGG | + |
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Preference number: 4 (lower is better) Translates to: ERPWSVQHLHEDVTQGDSVHYYV*LGMIQW Trigger: CCATTGAATCATCCCTAATCAGACATAATAGTGTAC...AGAGTCTCCCTGGGTCACGTCTTCATGCAGATGCTGCACAGACCAAGGCCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR TCA 90 bp | GAGAGGCCTTGGTCTGTGCAGCATCTGCATGAAGACGTGACCCAGGGAGACTCTTTAAGTTTTGACAACTaGGAAAGGCACTTACCACAT | + |
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Preference number: 4 (lower is better) Translates to: ERPWSVQHLHEDVTQGDSLSFDN*ERHLPH Trigger: ATGTGGTAAGTGCCTTTCTCAGTTGTCAAAACTTAA...AGAGTCTCCCTGGGTCACGTCTTCATGCAGATGCTGCACAGACCAAGGCCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR CCA 90 bp | GAGAGGCCTTGGTCTGTGCAGCATCTGCATGAAGACGTGACCCAGGGAGACTCTTTAAGAGCTGTGCATTaGGTAAAGTATTTGTCACAT | + |
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Preference number: 4 (lower is better) Translates to: ERPWSVQHLHEDVTQGDSLRAVH*VKYLSH Trigger: ATGTGACAAATACTTTACCCAATGCACAGCTCTTAA...AGAGTCTCCCTGGGTCACGTCTTCATGCAGATGCTGCACAGACCAAGGCCTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR CCA 90 bp | TGGTCTGTGCAGCATCTGCATGAAGACGTGACCCAGGGAGACTCTAAATTTGCCAGGTTTGACAACCAATaGAAGAACTTACCACATTCC | + |
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Preference number: 4 (lower is better) Translates to: WSVQHLHEDVTQGDSKFARFDNQ*KNLPHS Trigger: GGAATGTGGTAAGTTCTTCCATTGGTTGTCAAACCT...GGCAAATTTAGAGTCTCCCTGGGTCACGTCTTCATGCAGATGCTGCACAGACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR CCA 90 bp | TTTCAAAAGGTCATCAAGCAGAGAGGCCTTGGTCTGTGCAGCATCTGCATGAAGGTGTGGATTCTGGAATaGGTTTTAAGGTTTGACAAC | + |
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Preference number: 4 (lower is better) Translates to: FQKVIKQRGLGLCSICMKVWILE*VLRFDN Trigger: GTTGTCAAACCTTAAAACCCATTCCAGAATCCACAC...CTTCATGCAGATGCTGCACAGACCAAGGCCTCTCTGCTTGATGACCTTTTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR CCA 90 bp | TGGTCTGTGCAGCATCTGCATGAAGACGTGACCCAGGGAGACTCTAAATTTGCCTGTTTTTCTCTAGTATaGATCCTGTTGTGCTTTGTA | + |
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Preference number: 4 (lower is better) Translates to: WSVQHLHEDVTQGDSKFACFSLV*ILLCFV Trigger: TACAAAGCACAACAGGATCCATACTAGAGAAAAACA...GGCAAATTTAGAGTCTCCCTGGGTCACGTCTTCATGCAGATGCTGCACAGACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR TCA 90 bp | TTTCAAAAGGTCATCAAGCAGAGAGGCCTTGGTCTGTGCAGCATCTGCATGAAGATGGCTTTTAAGTTTTaGCAACTGAGAAAGGCACTT | + |
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Preference number: 4 (lower is better) Translates to: FQKVIKQRGLGLCSICMKMAFKF*QLRKAL Trigger: AAGTGCCTTTCTCAGTTGTCAAAACTTAAAAGCCAT...CTTCATGCAGATGCTGCACAGACCAAGGCCTCTCTGCTTGATGACCTTTTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| 3UTR CAA 72 bp | CCTATTGAAGACTTGGATAGCCCTTTTCCCTTCCTATaGCTCATACATCATACACGTGTTCCTCCTGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: PIEDLDSPFPFL*LIHHTRVPPAK Trigger: TTTTGCAGGAGGAACACGTGTATGATGTATGAGCAATAGGAAGGGAAAAGGGCTATCCAAGTCTTCAATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| 3UTR CAA 72 bp | ATTATTGAGATCCCCCTGTGTCTGCCTATTGAAGACTaGGATAGCCCTTTTCCCTTCCTATTGCTCATACAT | + |
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Preference number: 4 (lower is better) Translates to: IIEIPLCLPIED*DSPFPFLLLIH Trigger: ATGTATGAGCAATAGGAAGGGAAAAGGGCTATCCAAGTCTTCAATAGGCAGACACAGGGGGATCTCAATAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR TCA 90 bp | GATTCCAAGACAGGATTCTGCTCAGGTTACCATGGCTTTTTACATAGTGAACCATATTTACCACACATGTaGTGCTTCTCAACAGAGACC | + |
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Preference number: 4 (lower is better) Translates to: DSKTGFCSGYHGFLHSEPYLPHM*CFSTET Trigger: GGTCTCTGTTGAGAAGCATCACATGTGTGGTAAATA...TGGTTCACTATGTAAAAAGCCATGGTAACCTGAGCAGAATCCTGTCTTGGAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR CCA 90 bp | TTTCAAAAGGTCATCAAGCAGAGAGGCCTTGGTCTGTGCAGCATCTGCATGAAGGATTTGGACAAATGTTaGAACATAAACATTTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: FQKVIKQRGLGLCSICMKDLDKC*NINICH Trigger: GTGGCAAATGTTTATGTTCCAACATTTGTCCAAATC...CTTCATGCAGATGCTGCACAGACCAAGGCCTCTCTGCTTGATGACCTTTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR CCA 90 bp | GATTCCAAGACAGGATTCTGCTCAGGTTACCATGGCTTTTTACATAGTGAACCACTAAGACCCGTGCAATaGGTAAAAGATTTGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: DSKTGFCSGYHGFLHSEPLRPVQ*VKDLPH Trigger: ATGTGGCAAATCTTTTACCCATTGCACGGGTCTTAG...TGGTTCACTATGTAAAAAGCCATGGTAACCTGAGCAGAATCCTGTCTTGGAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| 3UTR CAA 72 bp | CTTGAGTACAGGAAAACCAATTTTCCTGCACATTCTTaGGGACTTCCAGGCTATGCATGTACATGTATCACA | + |
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Preference number: 4 (lower is better) Translates to: LEYRKTNFPAHS*GLPGYACTCIT Trigger: TGTGATACATGTACATGCATAGCCTGGAAGTCCCAAAGAATGTGCAGGAAAATTGGTTTTCCTGTACTCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| 3UTR CAA 72 bp | AGTGATATTAACGACACGTTATTAACAGAGAGTAGATaGTTAGGAGCAACAGGCAGCAAGCTACATTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SDINDTLLTESR*LGATGSKLHCL Trigger: CAGGCAATGTAGCTTGCTGCCTGTTGCTCCTAACAATCTACTCTCTGTTAATAACGTGTCGTTAATATCACT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR GCA 90 bp | TGCTCATACATCATACACGTGTTCCTCCTGCAAAATAAAACTCATCTCCATTTGGTATGGATCCTGTTGTaGTTTGTAAGAAGAGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: CSYIIHVFLLQNKTHLHLVWILL*FVRRER Trigger: GCGCTCTCTTCTTACAAAGCACAACAGGATCCATAC...CAAATGGAGATGAGTTTTATTTTGCAGGAGGAACACGTGTATGATGTATGAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR TCA 90 bp | TGCTCATACATCATACACGTGTTCCTCCTGCAAAATAAAACTCATCTCCATTTGCAATGGGCTTTAAGATaGGACAACCACTTAAAGGAC | + |
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Preference number: 4 (lower is better) Translates to: CSYIIHVFLLQNKTHLHLQWALR*DNHLKD Trigger: GTCCTTTAAGTGGTTGTCTCATCTTAAAGCCCATTG...CAAATGGAGATGAGTTTTATTTTGCAGGAGGAACACGTGTATGATGTATGAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR TCA 90 bp | CTATTGACCATTTTCAAAGAAAGCCAAGGTGTGAGTTTCATGGTACACATTGTTGTGGCTTTTAAGGCCTaGCAACCAATGGAAGAACTT | + |
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Preference number: 4 (lower is better) Translates to: LLTIFKESQGVSFMVHIVVAFKA*QPMEEL Trigger: AAGTTCTTCCATTGGTTGTCAGGCCTTAAAAGCCAC...AACAATGTGTACCATGAAACTCACACCTTGGCTTTCTTTGAAAATGGTCAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR TCA 90 bp | TGCTCATACATCATACACGTGTTCCTCCTGCAAAATAAAACTCATCTCCATTTGATGGTTTTTAAGTCTTaGCAACCGAGAAAAGCACTT | + |
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Preference number: 4 (lower is better) Translates to: CSYIIHVFLLQNKTHLHLMVFKS*QPRKAL Trigger: AAGTGCTTTTCTCGGTTGTCAAGACTTAAAAACCAT...CAAATGGAGATGAGTTTTATTTTGCAGGAGGAACACGTGTATGATGTATGAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR TCA 90 bp | CTATTGACCATTTTCAAAGAAAGCCAAGGTGTGAGTTTCATGGTACACATTGTTATGAGCTTTAAGACTTaGGCAGTGGGTAAAGGATTT | + |
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Preference number: 4 (lower is better) Translates to: LLTIFKESQGVSFMVHIVMSFKT*AVGKGF Trigger: AAATCCTTTACCCACTGCTCAAGTCTTAAAGCTCAT...AACAATGTGTACCATGAAACTCACACCTTGGCTTTCTTTGAAAATGGTCAATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR CAA 90 bp | GAGAGGCCTTGGTCTGTGCAGCATCTGCATGAAGACGTGACCCAGGGAGACTCTCCACACTCTTTATATTaGAAAAGTTCTTCTCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: ERPWSVQHLHEDVTQGDSPHSLY*KSSSPV Trigger: CACTGGAGAAGAACTTTTCAAATATAAAGAGTGTGG...AGAGTCTCCCTGGGTCACGTCTTCATGCAGATGCTGCACAGACCAAGGCCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR CAA 90 bp | TTTCAAAAGGTCATCAAGCAGAGAGGCCTTGGTCTGTGCAGCATCTGCATGAAGAAGCATTTCCCACAATaGTGTGCTTTCTCTCCACTA | + |
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Preference number: 5 (lower is better) Translates to: FQKVIKQRGLGLCSICMKKHFPQ*CAFSPL Trigger: TAGTGGAGAGAAAGCACACAATTGTGGGAAATGCTT...CTTCATGCAGATGCTGCACAGACCAAGGCCTCTCTGCTTGATGACCTTTTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR CAA 90 bp | TTTCAAAAGGTCATCAAGCAGAGAGGCCTTGGTCTGTGCAGCATCTGCATGAAGCGTGGATACTCTGATTaGGACAAATGTTGGAACATA | + |
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Preference number: 5 (lower is better) Translates to: FQKVIKQRGLGLCSICMKRGYSD*DKCWNI Trigger: TATGTTCCAACATTTGTCCAAATCAGAGTATCCACG...CTTCATGCAGATGCTGCACAGACCAAGGCCTCTCTGCTTGATGACCTTTTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS TCA 90 bp | CAACTCCTAAAGCATTTCCCACAATTGTGTGCTTTCTCTCCACTATaGGTTCTTTGCTGTACAAGTCTGTGTGTAGAGCCACAAAGCTTA | + |
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Preference number: 5 (lower is better) Translates to: QLLKHFPQLCAFSPL*VLCCTSLCVEPQSL Trigger: TAAGCTTTGTGGCTCTACACACAGACTTGTACAGCAAAGAACTCATAGTGGAGAGAAAGCACACAATTGTGGGAAATGCTTTAGGAGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR CAA 90 bp | ACTAGTATAGTTTTCAAAAGGTCATCAAGCAGAGAGGCCTTGGTCTGTGCAGCACAATGGGTAAAGGATTaGTCGCATTCCTTACACTTA | + |
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Preference number: 5 (lower is better) Translates to: TSIVFKRSSSREALVCAAQWVKD*SHSLHL Trigger: TAAGTGTAAGGAATGCGACAAATCCTTTACCCATTG...TGCTGCACAGACCAAGGCCTCTCTGCTTGATGACCTTTTGAAAACTATACTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS-3UTR CAA 90 bp | GATTCCAAGACAGGATTCTGCTCAGGTTACCATGGCTTTTTACATAGTGAACCACGCTGGGTAAAGGATTaGTCACATTTACCACATTTG | + |
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Preference number: 5 (lower is better) Translates to: DSKTGFCSGYHGFLHSEPRWVKD*SHLPHL Trigger: CAAATGTGGTAAATGTGACAAATCCTTTACCCAGCG...TGGTTCACTATGTAAAAAGCCATGGTAACCTGAGCAGAATCCTGTCTTGGAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS GCA 72 bp | GGAAGCATCCTGGTAGCTGTACTTGTTACAGTTTTCTaGAGTACTACTTGTGTTATAAGGTGTACATGGAGA | + |
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Preference number: 6 (lower is better) Translates to: GSILVAVLVTVF*STTCVIRCTWR Trigger: TCTCCATGTACACCTTATAACACAAGTAGTACTGCAGAAAACTGTAACAAGTACAGCTACCAGGATGCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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| CDS CCA 72 bp | GTTTTCTGCAGTACTACTTGTGTTATAAGGTGTACATaGAGAGGATTCATGAACCATTTTGCCAAGCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: VFCSTTCVIRCT*RGFMNHFAKLF Trigger: AAAGAGCTTGGCAAAATGGTTCATGAATCCTCTCCATGTACACCTTATAACACAAGTAGTACTGCAGAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073312.7 |
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