Pregenerated sensors for ZFP759 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057396Ensembl transcript IDs: ENSMUST00000052716.8, ENSMUST00000224346.2
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATAATTATGTTTATTTATTTCTGGGCACACAAATTTATGTTTGTGTaGGAGCCTATTCATGGAGGTCAGAGGAAAACCTTCAGAGGTAAT | + |
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Preference number: 1 (lower is better) Translates to: IIMFIYFWAHKFMFV*EPIHGGQRKTFRGN Trigger: ATTACCTCTGAAGGTTTTCCTCTGACCTCCATGAATAGGCTCCCACACAAACATAAATTTGTGTGCCCAGAAATAAATAAACATAATTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGCACACAAATTTATGTTTGTGTGGGAGCCTATTCATGGAGGTCAGAGGAAAACAATTACAACACTATaGAAGACCACAGCCCATGTG | + |
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Preference number: 2 (lower is better) Translates to: WAHKFMFVWEPIHGGQRKTITTL*KTTAHV Trigger: CACATGGGCTGTGGTCTTTCATAGTGTTGTAATTGT...TTTCCTCTGACCTCCATGAATAGGCTCCCACACAAACATAAATTTGTGTGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGGGCACACAAATTTATGTTTGTGTGGGAGCCTATTCATGGAGGTCAGAGGATCTGTGTTCAGACCATaGCATGAAATTCAAAAGTAT | + |
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Preference number: 2 (lower is better) Translates to: SGHTNLCLCGSLFMEVRGSVFRP*HEIQKY Trigger: ATACTTTTGAATTTCATGGCATGGTCTGAACACAGA...TCCTCTGACCTCCATGAATAGGCTCCCACACAAACATAAATTTGTGTGCCCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| 3UTR-3UTR GCA 90 bp | AATTACTTCTACTTTGTGAGTACTGGGAATACTAACATGCATGTGGGGGTTATAGAATACTGGAAAGTCTaGCACATACTTCACACTTTT | + |
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Preference number: 2 (lower is better) Translates to: NYFYFVSTGNTNMHVGVIEYWKV*HILHTF Trigger: AAAAGTGTGAAGTATGTGGCAGACTTTCCAGTATTC...TATAACCCCCACATGCATGTTAGTATTCCCAGTACTCACAAAGTAGAAGTAATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| 3UTR-3UTR CAA 90 bp | TATTTATTTCTGGGCACACAAATTTATGTTTGTGTGGGAGCCTATTCATGGAGGCCGGTAATACAGTGTTaGCCACATTCTCCACTTGCG | + |
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Preference number: 3 (lower is better) Translates to: YLFLGTQIYVCVGAYSWRPVIQC*PHSPLA Trigger: CGCAAGTGGAGAATGTGGCAAACACTGTATTACCGG...CCTCCATGAATAGGCTCCCACACAAACATAAATTTGTGTGCCCAGAAATAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| 3UTR-3UTR CAA 90 bp | TGGGCACACAAATTTATGTTTGTGTGGGAGCCTATTCATGGAGGTCAGAGGAAACAAACAGCCTACAACTaGAAAGGTCCACAAAGGATT | + |
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Preference number: 3 (lower is better) Translates to: WAHKFMFVWEPIHGGQRKQTAYN*KGPQRI Trigger: AATCCTTTGTGGACCTTTCAAGTTGTAGGCTGTTTG...TTTCCTCTGACCTCCATGAATAGGCTCCCACACAAACATAAATTTGTGTGCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| 3UTR-3UTR CAA 90 bp | TGTGGGAGCCTATTCATGGAGGTCAGAGGAAAACCTTCAGAGGTAATTACTTCTATGAATTCTTTGATGTaGCTTAAGACCCAAAGACCG | + |
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Preference number: 3 (lower is better) Translates to: CGSLFMEVRGKPSEVITSMNSLM*LKTQRP Trigger: CGGTCTTTGGGTCTTAAGCAACATCAAAGAATTCAT...AGAAGTAATTACCTCTGAAGGTTTTCCTCTGACCTCCATGAATAGGCTCCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| 3UTR TCA 72 bp | TACAACACTATGAAAGACCACAGCCCATGTGTCAAATaGGACTCAAGGAAATCTCTTGACTGTGAGCTTCTA | + |
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Preference number: 3 (lower is better) Translates to: YNTMKDHSPCVK*DSRKSLDCELL Trigger: TAGAAGCTCACAGTCAAGAGATTTCCTTGAGTCTCATTTGACACATGGGCTGTGGTCTTTCATAGTGTTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| 3UTR TCA 72 bp | CTTAGCCCCACCTCAGAAGTCAAACAGCCTACAACTTaGAAGGTCCACAAAGGATTAAACAATTACAACACT | + |
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Preference number: 3 (lower is better) Translates to: LSPTSEVKQPTT*KVHKGLNNYNT Trigger: AGTGTTGTAATTGTTTAATCCTTTGTGGACCTTTCAAGTTGTAGGCTGTTTGACTTCTGAGGTGGGGCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| 3UTR TCA 72 bp | AGAGGAAAACCTTCAGAGGTAATTACTTCTACTTTGTaGGTACTGGGAATACTAACATGCATGTGGGGGTTA | + |
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Preference number: 3 (lower is better) Translates to: RGKPSEVITSTL*VLGILTCMWGL Trigger: TAACCCCCACATGCATGTTAGTATTCCCAGTACTCACAAAGTAGAAGTAATTACCTCTGAAGGTTTTCCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| 3UTR CCA 72 bp | TTTATTTATTTCTGGGCACACAAATTTATGTTTGTGTaGGAGCCTATTCATGGAGGTCAGAGGAAAACCTTC | + |
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Preference number: 3 (lower is better) Translates to: FIYFWAHKFMFV*EPIHGGQRKTF Trigger: GAAGGTTTTCCTCTGACCTCCATGAATAGGCTCCCACACAAACATAAATTTGTGTGCCCAGAAATAAATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| 3UTR-3UTR CAA 90 bp | TTCCAAAGTCAACATGCTAGCTCTAGCCACAAAGTTTTAAATCATAACATTCCTACTCAAGGAAATCTCTaGACTGTGAGCTTCTACAAC | + |
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Preference number: 3 (lower is better) Translates to: FQSQHASSSHKVLNHNIPTQGNL*TVSFYN Trigger: GTTGTAGAAGCTCACAGTCAAGAGATTTCCTTGAGT...AGGAATGTTATGATTTAAAACTTTGTGGCTAGAGCTAGCATGTTGACTTTGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR TCA 90 bp | TCTGGGCACACAAATTTATGTTTGTGTGGGAGCCTATTCATGGAGGTCAGAGGAATTCTCTTGTGTTCATaGAGTGATGATCGAGAGCGG | + |
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Preference number: 4 (lower is better) Translates to: SGHTNLCLCGSLFMEVRGILLCS*SDDRER Trigger: CCGCTCTCGATCATCACTTCATGAACACAAGAGAAT...TCCTCTGACCTCCATGAATAGGCTCCCACACAAACATAAATTTGTGTGCCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR GCA 90 bp | TGTGGGAGCCTATTCATGGAGGTCAGAGGAAAACCTTCAGAGGTAATTACTTCTGATAACGGAAGGCCTTaGCACACACTTCACACTTAT | + |
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Preference number: 4 (lower is better) Translates to: CGSLFMEVRGKPSEVITSDNGRP*HTLHTY Trigger: ATAAGTGTGAAGTGTGTGGCAAGGCCTTCCGTTATC...AGAAGTAATTACCTCTGAAGGTTTTCCTCTGACCTCCATGAATAGGCTCCCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR TCA 90 bp | TGTGGGAGCCTATTCATGGAGGTCAGAGGAAAACCTTCAGAGGTAATTACTTCTGTGTTGAGAAAGTTTTaGTGGAACATGGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: CGSLFMEVRGKPSEVITSVLRKF*WNMEGL Trigger: AAGGCCTTCCATGTTCCATCAAAACTTTCTCAACAC...AGAAGTAATTACCTCTGAAGGTTTTCCTCTGACCTCCATGAATAGGCTCCCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR TCA 90 bp | AATTACTTCTACTTTGTGAGTACTGGGAATACTAACATGCATGTGGGGGTTATAAGAGCTATTTCCCCCTaGGTACATAGAGATGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: NYFYFVSTGNTNMHVGVIRAISP*VHRDGH Trigger: GTGGCCATCTCTATGTACTCAGGGGGAAATAGCTCT...TATAACCCCCACATGCATGTTAGTATTCCCAGTACTCACAAAGTAGAAGTAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR GCA 90 bp | TGTGGGAGCCTATTCATGGAGGTCAGAGGAAAACCTTCAGAGGTAATTACTTCTGTATTCCCTCTCCTCTaGAGAGAAATATATTACCAC | + |
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Preference number: 4 (lower is better) Translates to: CGSLFMEVRGKPSEVITSVFPLL*REIYYH Trigger: GTGGTAATATATTTCTCTGCAGAGGAGAGGGAATAC...AGAAGTAATTACCTCTGAAGGTTTTCCTCTGACCTCCATGAATAGGCTCCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR TCA 90 bp | AATTACTTCTACTTTGTGAGTACTGGGAATACTAACATGCATGTGGGGGTTATAATAGAGATGGCCACTTaGCTCTTCACATCTAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: NYFYFVSTGNTNMHVGVIIEMAT*LFTSRG Trigger: GCCTCTAGATGTGAAGAGTCAAGTGGCCATCTCTAT...TATAACCCCCACATGCATGTTAGTATTCCCAGTACTCACAAAGTAGAAGTAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR TCA 90 bp | TATTTATTTCTGGGCACACAAATTTATGTTTGTGTGGGAGCCTATTCATGGAGGGTGTTGACAAATAGATaGTGGAGAGAAGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: YLFLGTQIYVCVGAYSWRVLTNR*WREEGL Trigger: AAGGCCTTCTTCTCTCCATCATCTATTTGTCAACAC...CCTCCATGAATAGGCTCCCACACAAACATAAATTTGTGTGCCCAGAAATAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR CCA 90 bp | AATTACTTCTACTTTGTGAGTACTGGGAATACTAACATGCATGTGGGGGTTATAAAATCTGACCAGGTATaGCTTAGAGGAAGCAAGACC | + |
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Preference number: 4 (lower is better) Translates to: NYFYFVSTGNTNMHVGVIKSDQV*LRGSKT Trigger: GGTCTTGCTTCCTCTAAGCCATACCTGGTCAGATTT...TATAACCCCCACATGCATGTTAGTATTCCCAGTACTCACAAAGTAGAAGTAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR TCA 90 bp | AGGAAAACCTTCAGAGGTAATTACTTCTACTTTGTGAGTACTGGGAATACTAACATGGTTGGAAAGTATTaGTGGATAACGGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: RKTFRGNYFYFVSTGNTNMVGKY*WITEGL Trigger: AAGGCCTTCCGTTATCCATCAATACTTTCCAACCAT...GTTAGTATTCCCAGTACTCACAAAGTAGAAGTAATTACCTCTGAAGGTTTTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR TCA 90 bp | AATTACTTCTACTTTGTGAGTACTGGGAATACTAACATGCATGTGGGGGTTATAGGTAACTCTCCTGTATaGATTCTCTTGTGTTGCCAA | + |
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Preference number: 4 (lower is better) Translates to: NYFYFVSTGNTNMHVGVIGNSPV*ILLCCQ Trigger: TTGGCAACACAAGAGAATTCATACAGGAGAGTTACC...TATAACCCCCACATGCATGTTAGTATTCCCAGTACTCACAAAGTAGAAGTAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR TCA 90 bp | TATTTATTTCTGGGCACACAAATTTATGTTTGTGTGGGAGCCTATTCATGGAGGGGTTTATCTTCTCTATaGATTCCCTTGTGTACACGA | + |
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Preference number: 4 (lower is better) Translates to: YLFLGTQIYVCVGAYSWRGLSSL*IPLCTR Trigger: TCGTGTACACAAGGGAATTCATAGAGAAGATAAACC...CCTCCATGAATAGGCTCCCACACAAACATAAATTTGTGTGCCCAGAAATAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR CCA 90 bp | TTCCAAAGTCAACATGCTAGCTCTAGCCACAAAGTTTTAAATCATAACATTCCTAGTGATGATGGAGAGTaGAAGGCCTTTCCACATACT | + |
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Preference number: 4 (lower is better) Translates to: FQSQHASSSHKVLNHNIPSDDGE*KAFPHT Trigger: AGTATGTGGAAAGGCCTTCCACTCTCCATCATCACT...AGGAATGTTATGATTTAAAACTTTGTGGCTAGAGCTAGCATGTTGACTTTGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR TCA 90 bp | AGGAAAACCTTCAGAGGTAATTACTTCTACTTTGTGAGTACTGGGAATACTAACGGTTTGTCTTCTCTATaGGTTCCCTTGTGTAGAATA | + |
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Preference number: 4 (lower is better) Translates to: RKTFRGNYFYFVSTGNTNGLSSL*VPLCRI Trigger: TATTCTACACAAGGGAACTCATAGAGAAGACAAACC...GTTAGTATTCCCAGTACTCACAAAGTAGAAGTAATTACCTCTGAAGGTTTTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR GCA 90 bp | AATTACTTCTACTTTGTGAGTACTGGGAATACTAACATGCATGTGGGGGTTATAGATATTCAAAGGCCTTaGCACATATTTCACACTTGT | + |
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Preference number: 4 (lower is better) Translates to: NYFYFVSTGNTNMHVGVIDIQRP*HIFHTC Trigger: ACAAGTGTGAAATATGTGGCAAGGCCTTTGAATATC...TATAACCCCCACATGCATGTTAGTATTCCCAGTACTCACAAAGTAGAAGTAATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| 3UTR CAA 72 bp | TTATGTTTATTTATTTCTGGGCACACAAATTTATGTTaGTGTGGGAGCCTATTCATGGAGGTCAGAGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: LCLFISGHTNLC*CGSLFMEVRGK Trigger: TTTTCCTCTGACCTCCATGAATAGGCTCCCACACAAACATAAATTTGTGTGCCCAGAAATAAATAAACATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR CAA 90 bp | TCTGGGCACACAAATTTATGTTTGTGTGGGAGCCTATTCATGGAGGTCAGAGGAGGATATTCAAAGGCCTaGCCACATATTTCACACTTG | + |
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Preference number: 5 (lower is better) Translates to: SGHTNLCLCGSLFMEVRGGYSKA*PHISHL Trigger: CAAGTGTGAAATATGTGGCAAGGCCTTTGAATATCC...TCCTCTGACCTCCATGAATAGGCTCCCACACAAACATAAATTTGTGTGCCCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR CAA 90 bp | TCTGGGCACACAAATTTATGTTTGTGTGGGAGCCTATTCATGGAGGTCAGAGGAGAAAAACAAAAGGACTaGCCAACCTCTTCACAACTA | + |
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Preference number: 5 (lower is better) Translates to: SGHTNLCLCGSLFMEVRGEKQKD*PTSSQL Trigger: TAGTTGTGAAGAGGTTGGCAAGTCCTTTTGTTTTTC...TCCTCTGACCTCCATGAATAGGCTCCCACACAAACATAAATTTGTGTGCCCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR CAA 90 bp | TGTGGGAGCCTATTCATGGAGGTCAGAGGAAAACCTTCAGAGGTAATTACTTCTTGTGTTGAGAAAGTTTaGATGGAACATGGAAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: CGSLFMEVRGKPSEVITSCVEKV*MEHGRP Trigger: AGGCCTTCCATGTTCCATCAAAACTTTCTCAACACA...AGAAGTAATTACCTCTGAAGGTTTTCCTCTGACCTCCATGAATAGGCTCCCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR CAA 90 bp | TGGGCACACAAATTTATGTTTGTGTGGGAGCCTATTCATGGAGGTCAGAGGAAAGGATATTTGAAGGCCTaGCCACATATTTCACAGTTG | + |
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Preference number: 5 (lower is better) Translates to: WAHKFMFVWEPIHGGQRKGYLKA*PHISQL Trigger: CAACTGTGAAATATGTGGCAAGGCCTTCAAATATCC...TTTCCTCTGACCTCCATGAATAGGCTCCCACACAAACATAAATTTGTGTGCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR CAA 90 bp | TATTTATTTCTGGGCACACAAATTTATGTTTGTGTGGGAGCCTATTCATGGAGGGGAAAGCGGAAGGTCTaGCCACATACATCACACTTG | + |
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Preference number: 5 (lower is better) Translates to: YLFLGTQIYVCVGAYSWRGKRKV*PHTSHL Trigger: CAAGTGTGATGTATGTGGCAAGACCTTCCGCTTTCC...CCTCCATGAATAGGCTCCCACACAAACATAAATTTGTGTGCCCAGAAATAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR CAA 90 bp | TGTGGGAGCCTATTCATGGAGGTCAGAGGAAAACCTTCAGAGGTAATTACTTCTAGTCTTGATGGATATTaGAAGGCCTTGCCACATATT | + |
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Preference number: 5 (lower is better) Translates to: CGSLFMEVRGKPSEVITSSLDGY*KALPHI Trigger: AATATGTGGCAAGGCCTTCAAATATCCATCAAGACT...AGAAGTAATTACCTCTGAAGGTTTTCCTCTGACCTCCATGAATAGGCTCCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR CAA 90 bp | AATTACTTCTACTTTGTGAGTACTGGGAATACTAACATGCATGTGGGGGTTATACCACATACATCACACTaGCAGGGTAACTCTCCTGTA | + |
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Preference number: 5 (lower is better) Translates to: NYFYFVSTGNTNMHVGVIPHTSH*QGNSPV Trigger: TACAGGAGAGTTACCCTGCAAGTGTGATGTATGTGG...TATAACCCCCACATGCATGTTAGTATTCCCAGTACTCACAAAGTAGAAGTAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR CAA 90 bp | TATTTATTTCTGGGCACACAAATTTATGTTTGTGTGGGAGCCTATTCATGGAGGGGATATTGGAAAGCCTaGCCACATACATCACACTTG | + |
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Preference number: 5 (lower is better) Translates to: YLFLGTQIYVCVGAYSWRGYWKA*PHTSHL Trigger: CAAGTGTGATGTATGTGGCAAGGCTTTCCAATATCC...CCTCCATGAATAGGCTCCCACACAAACATAAATTTGTGTGCCCAGAAATAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR CAA 90 bp | TTCAGAGGTAATTACTTCTACTTTGTGAGTACTGGGAATACTAACATGCATGTGGGATATTTGAAGGCCTaGGCACATACTTCACAGTTG | + |
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Preference number: 5 (lower is better) Translates to: FRGNYFYFVSTGNTNMHVGYLKA*AHTSQL Trigger: CAACTGTGAAGTATGTGCCAAGGCCTTCAAATATCC...CACATGCATGTTAGTATTCCCAGTACTCACAAAGTAGAAGTAATTACCTCTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR CAA 90 bp | TTCAGAGGTAATTACTTCTACTTTGTGAGTACTGGGAATACTAACATGCATGTGCTCTCAGAAACTTCTTaGCATGTAGAGCTATTTCCC | + |
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Preference number: 5 (lower is better) Translates to: FRGNYFYFVSTGNTNMHVLSETS*HVELFP Trigger: GGGAAATAGCTCTACATGCAAAGAAGTTTCTGAGAG...CACATGCATGTTAGTATTCCCAGTACTCACAAAGTAGAAGTAATTACCTCTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS-3UTR CAA 90 bp | CTTGTGACATTTCAGTCTAGTATGAATTATGAGGTTTTCCCCAAGGTTTCTGTATATGGTTGGAAAGTATaGATGGATAATGGAAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: LVTFQSSMNYEVFPKVSVYGWKV*MDNGRP Trigger: AGGCCTTCCATTATCCATCAATACTTTCCAACCATA...TACAGAAACCTTGGGGAAAACCTCATAATTCATACTAGACTGAAATGTCACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052716.8 |
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| CDS TCA 72 bp | GAGCTATTTCCCCCTGAGTACATAGAGATGGCCACTTaGCTCTTCACATCTAGAGGCTCTTGTATTTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: ELFPPEYIEMAT*LFTSRGSCICS Trigger: GGAGCAAATACAAGAGCCTCTAGATGTGAAGAGTCAAGTGGCCATCTCTATGTACTCAGGGGGAAATAGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052716.8 ENSMUST00000224346.2 |
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| CDS TCA 72 bp | CTCAGAAACTTCTTTGCATGTAGAGCTATTTCCCCCTaGGTACATAGAGATGGCCACTTGACTCTTCACATC | + |
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Preference number: 6 (lower is better) Translates to: LRNFFACRAISP*VHRDGHLTLHI Trigger: GATGTGAAGAGTCAAGTGGCCATCTCTATGTACTCAGGGGGAAATAGCTCTACATGCAAAGAAGTTTCTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052716.8 ENSMUST00000224346.2 |
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