Pregenerated sensors for ZFP747 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054381Ensembl transcript IDs: ENSMUST00000067425.6, ENSMUST00000205832.2
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAACTGGTCTCAAATTCCTGGTCTTCCTGTCTCTACCTCCCCAGTaGGGGAATCACAGGCAGGAACCACCACACCAGGCTCTTGACCAG | + |
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Preference number: 1 (lower is better) Translates to: QTGLKFLVFLSLPPQ*GNHRQEPPHQALDQ Trigger: CTGGTCAAGAGCCTGGTGTGGTGGTTCCTGCCTGTGATTCCCCCACTGGGGAGGTAGAGACAGGAAGACCAGGAATTTGAGACCAGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| 3UTR GCA 90 bp | GTGCCCAGACCAGCAGTACCTAGAACGTCTGTGACTTCAGGAAGATaGCATAGGTTCAATCCTCTGGGCCTCAAACAATGTACATATTTC | + |
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Preference number: 1 (lower is better) Translates to: VPRPAVPRTSVTSGR*HRFNPLGLKQCTYF Trigger: GAAATATGTACATTGTTTGAGGCCCAGAGGATTGAACCTATGGCATCTTCCTGAAGTCACAGACGTTCTAGGTACTGCTGGTCTGGGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| 3UTR TCA 90 bp | ACCCACACAGAGCCATCAACTTTAGCCTCTGCATTAAAGACACAATaGCTTCAACGAGGCTCTCTTCATCCTCAGGCTTCTCAATACTTC | + |
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Preference number: 1 (lower is better) Translates to: THTEPSTLASALKTQ*LQRGSLHPQASQYF Trigger: GAAGTATTGAGAAGCCTGAGGATGAAGAGAGCCTCGTTGAAGTCATTGTGTCTTTAATGCAGAGGCTAAAGTTGATGGCTCTGTGTGGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| 3UTR CAA 90 bp | CTGAGCCAGGAAAAGGCCCTCGCTTCTCATGGAGCTCTAGTGGGGTaGCCCAGCCCAGCCCAGCCCAATAGACGCCAAGACGACAGTACA | + |
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Preference number: 2 (lower is better) Translates to: LSQEKALASHGALVG*PSPAQPNRRQDDST Trigger: TGTACTGTCGTCTTGGCGTCTATTGGGCTGGGCTGGGCTGGGCAACCCCACTAGAGCTCCATGAGAAGCGAGGGCCTTTTCCTGGCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| 3UTR-3UTR CCA 90 bp | GGGTTGCCCAGCCCAGCCCAGCCCAATAGACGCCAAGACGACAGTACATCCGGAGTGTGCAGATGCATCTaGAAACCTCCTAGAAGACTG | + |
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Preference number: 2 (lower is better) Translates to: GLPSPAQPNRRQDDSTSGVCRCI*KPPRRL Trigger: CAGTCTTCTAGGAGGTTTCCAGATGCATCTGCACAC...TCCGGATGTACTGTCGTCTTGGCGTCTATTGGGCTGGGCTGGGCTGGGCAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| 3UTR-3UTR GCA 90 bp | CGCACTTTTGGAATAACTCTGGGTAATGCTAGAAGCCCACAGGTGGATCCGGGTTTGTGCGAAACTGCCTaGCACATTGAGGGCAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: RTFGITLGNARSPQVDPGLCETA*HIEGRG Trigger: ACCCCTGCCCTCAATGTGGCAGGCAGTTTCGCACAA...ACCCGGATCCACCTGTGGGCTTCTAGCATTACCCAGAGTTATTCCAAAAGTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| 3UTR-3UTR CAA 90 bp | AAAGGCCCTCGCTTCTCATGGAGCTCTAGTGGGGTTGCCCAGCCCAGCCCAGCCAAACTGCCTGCCACATaGAGGGCAGGGGTAAGGACG | + |
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Preference number: 3 (lower is better) Translates to: KGPRFSWSSSGVAQPSPAKLPAT*RAGVRT Trigger: CGTCCTTACCCCTGCCCTCAATGTGGCAGGCAGTTT...GGCTGGGCTGGGCTGGGCAACCCCACTAGAGCTCCATGAGAAGCGAGGGCCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| 3UTR CCA 72 bp | AATACTTCTGAGCCAGGAAAAGGCCCTCGCTTCTCATaGAGCTCTAGTGGGGTTGCCCAGCCCAGCCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: NTSEPGKGPRFS*SSSGVAQPSPA Trigger: GGCTGGGCTGGGCTGGGCAACCCCACTAGAGCTCCATGAGAAGCGAGGGCCTTTTCCTGGCTCAGAAGTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| 3UTR-3UTR CAA 90 bp | ATGACTTCAACGAGGCTCTCTTCATCCTCAGGCTTCTCAATACTTCTGAGCCAGGGAGCTCTAGTGGGGTaGCCCAGCCCAGCCCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: MTSTRLSSSSGFSILLSQGALVG*PSPAQP Trigger: GGGCTGGGCTGGGCTGGGCAACCCCACTAGAGCTCC...CTGGCTCAGAAGTATTGAGAAGCCTGAGGATGAAGAGAGCCTCGTTGAAGTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| 3UTR TCA 72 bp | GGGGAATCACAGGCAGGAACCACCACACCAGGCTCTTaGCCAGTAACTCAATCCCGGAGAATGCAGCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: GESQAGTTTPGS*PVTQSRRMQLA Trigger: AGCCAGCTGCATTCTCCGGGATTGAGTTACTGGTCAAGAGCCTGGTGTGGTGGTTCCTGCCTGTGATTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| 3UTR CCA 72 bp | AGACGACAGTACATCCGGAGTGTGTGCAGATGCATCTaGAAACCTCCTAGAAGACTGTACCCGGTGCCCAGA | + |
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Preference number: 3 (lower is better) Translates to: RRQYIRSVCRCI*KPPRRLYPVPR Trigger: TCTGGGCACCGGGTACAGTCTTCTAGGAGGTTTCCAGATGCATCTGCACACACTCCGGATGTACTGTCGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| 3UTR GCA 72 bp | AAAGTTCTGAACATCCTTGTGCCACCAGCTACCAAGTaGTGCAAGCAAGCATGTGGCGGCACACACAGTGTA | + |
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Preference number: 3 (lower is better) Translates to: KVLNILVPPATK*CKQACGGTHSV Trigger: TACACTGTGTGTGCCGCCACATGCTTGCTTGCAGCACTTGGTAGCTGGTGGCACAAGGATGTTCAGAACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| 3UTR GCA 72 bp | CTAGCGGAGACAGCAAATGAGAGTTGTGGCTCCTTCTaGCCAGGTTCTGGAGAAAATGTCTTCTGCATTGCT | + |
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Preference number: 3 (lower is better) Translates to: LAETANESCGSF*PGSGENVFCIA Trigger: AGCAATGCAGAAGACATTTTCTCCAGAACCTGGGCAGAAGGAGCCACAACTCTCATTTGCTGTCTCCGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205832.2 |
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| 3UTR TCA 72 bp | GAGCCATCAACTTTAGCCTCTGCATTAAAGACACAATaGCTTCAACGAGGCTCTCTTCATCCTCAGGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: EPSTLASALKTQ*LQRGSLHPQAS Trigger: AGAAGCCTGAGGATGAAGAGAGCCTCGTTGAAGTCATTGTGTCTTTAATGCAGAGGCTAAAGTTGATGGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| 3UTR CCA 72 bp | TATTTATGTTTATATGCAGTCTCAGGTGACCCAAACTaGTCTCAAATTCCTGGTCTTCCTGTCTCTACCTCC | + |
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Preference number: 3 (lower is better) Translates to: YLCLYAVSGDPN*SQIPGLPVSTS Trigger: GGAGGTAGAGACAGGAAGACCAGGAATTTGAGACCAGTTTGGGTCACCTGAGACTGCATATAAACATAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| 3UTR TCA 72 bp | ATTGAGAAAATCCTAAAATCCACTGTCTTCCAGACCTaGTTCTCTCCTTCCAACGCTGAAATCAAGACATGG | + |
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Preference number: 3 (lower is better) Translates to: IEKILKSTVFQT*FSPSNAEIKTW Trigger: CCATGTCTTGATTTCAGCGTTGGAAGGAGAGAATCAGGTCTGGAAGACAGTGGATTTTAGGATTTTCTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR CCA 90 bp | AAAGGCCCTCGCTTCTCATGGAGCTCTAGTGGGGTTGCCCAGCCCAGCCCAGCCGTGTGGACACGGAGATaGCTGGTGAGTGAAGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: KGPRFSWSSSGVAQPSPAVWTRR*LVSEER Trigger: GCGCTCTTCACTCACCAGCCATCTCCGTGTCCACAC...GGCTGGGCTGGGCTGGGCAACCCCACTAGAGCTCCATGAGAAGCGAGGGCCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR TCA 90 bp | AAAGGCCCTCGCTTCTCATGGAGCTCTAGTGGGGTTGCCCAGCCCAGCCCAGCCAAGGCACTGCCACAGTaGGTGCAAGAAAAGGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: KGPRFSWSSSGVAQPSPAKALPQ*VQEKGV Trigger: GACCCCCTTTTCTTGCACTCACTGTGGCAGTGCCTT...GGCTGGGCTGGGCTGGGCAACCCCACTAGAGCTCCATGAGAAGCGAGGGCCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR GCA 90 bp | AAAGGCCCTCGCTTCTCATGGAGCTCTAGTGGGGTTGCCCAGCCCAGCCCAGCCCGGTGTATGGCTCGGTaGATGCTCAGGGAGGAATAC | + |
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Preference number: 4 (lower is better) Translates to: KGPRFSWSSSGVAQPSPARCMAR*MLREEY Trigger: GTATTCCTCCCTGAGCATGCACCGAGCCATACACCG...GGCTGGGCTGGGCTGGGCAACCCCACTAGAGCTCCATGAGAAGCGAGGGCCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| 3UTR CAA 72 bp | GAAAAGGCCCTCGCTTCTCATGGAGCTCTAGTGGGGTaGCCCAGCCCAGCCCAGCCCAATAGACGCCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: EKALASHGALVG*PSPAQPNRRQD Trigger: GTCTTGGCGTCTATTGGGCTGGGCTGGGCTGGGCAACCCCACTAGAGCTCCATGAGAAGCGAGGGCCTTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR GCA 90 bp | AAAGGCCCTCGCTTCTCATGGAGCTCTAGTGGGGTTGCCCAGCCCAGCCCAGCCCACTGCCACAGTGAGTaGAAGAAAAGGGGGTCACAC | + |
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Preference number: 4 (lower is better) Translates to: KGPRFSWSSSGVAQPSPAHCHSE*KKRGSH Trigger: GTGTGACCCCCTTTTCTTGCACTCACTGTGGCAGTG...GGCTGGGCTGGGCTGGGCAACCCCACTAGAGCTCCATGAGAAGCGAGGGCCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR TCA 90 bp | AAAGGCCCTCGCTTCTCATGGAGCTCTAGTGGGGTTGCCCAGCCCAGCCCAGCCGAGATGGCTGGTGAGTaGAGAGCGCTGTGTAAAAGT | + |
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Preference number: 4 (lower is better) Translates to: KGPRFSWSSSGVAQPSPAEMAGE*RALCKS Trigger: ACTTTTACACAGCGCTCTTCACTCACCAGCCATCTC...GGCTGGGCTGGGCTGGGCAACCCCACTAGAGCTCCATGAGAAGCGAGGGCCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR CCA 90 bp | CGGAGACAGCAAATGAGAGTTGTGGCTCCTTCTGCCCAGGTTCTGGAGAAAATGGCACATGGCCACCTCTaGATCCTGGGCACCGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: RRQQMRVVAPSAQVLEKMAHGHL*ILGTGS Trigger: GGACCCGGTGCCCAGGATCCAGAGGTGGCCATGTGC...CATTTTCTCCAGAACCTGGGCAGAAGGAGCCACAACTCTCATTTGCTGTCTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205832.2 |
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| 3UTR CAA 72 bp | GGGGGAATCACAGGCAGGAACCACCACACCAGGCTCTaGACCAGTAACTCAATCCCGGAGAATGCAGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: GGITGRNHHTRL*TSNSIPENAAG Trigger: GCCAGCTGCATTCTCCGGGATTGAGTTACTGGTCAAGAGCCTGGTGTGGTGGTTCCTGCCTGTGATTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR CCA 90 bp | CCACTAGCGGAGACAGCAAATGAGAGTTGTGGCTCCTTCTGCCCAGGTTCTGGACTTCTGTCCTGCACATaGCCACCTCTGGATCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: PLAETANESCGSFCPGSGLLSCT*PPLDPG Trigger: CCCAGGATCCAGAGGTGGCCATGTGCAGGACAGAAG...TCCAGAACCTGGGCAGAAGGAGCCACAACTCTCATTTGCTGTCTCCGCTAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205832.2 |
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| CDS-3UTR TCA 90 bp | GGAAACCTCCTAGAAGACTGTACCCGGTGCCCAGACCAGCAGTACCTAGAACGTAGCGGAGACAGCAAATaGGAGTTGTGGCTCCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: GNLLEDCTRCPDQQYLERSGDSK*ELWLLL Trigger: CAGAAGGAGCCACAACTCTCATTTGCTGTCTCCGCT...ACGTTCTAGGTACTGCTGGTCTGGGCACCGGGTACAGTCTTCTAGGAGGTTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR GCA 90 bp | CCACTAGCGGAGACAGCAAATGAGAGTTGTGGCTCCTTCTGCCCAGGTTCTGGATTCCTTTCCTTCTCGTaGCTGCAATCTGAGTGGACT | + |
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Preference number: 4 (lower is better) Translates to: PLAETANESCGSFCPGSGFLSFS*LQSEWT Trigger: AGTCCACTCAGATTGCAGGCACGAGAAGGAAAGGAA...TCCAGAACCTGGGCAGAAGGAGCCACAACTCTCATTTGCTGTCTCCGCTAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205832.2 |
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| CDS-3UTR CCA 90 bp | CAGGAAGATGCCATAGGTTCAATCCTCTGGGCCTCAAACAATGTACATATTTCAGCACATGGCCACCTCTaGATCCTGGGCACCGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: QEDAIGSILWASNNVHISAHGHL*ILGTGS Trigger: GGACCCGGTGCCCAGGATCCAGAGGTGGCCATGTGC...TGAAATATGTACATTGTTTGAGGCCCAGAGGATTGAACCTATGGCATCTTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR CCA 90 bp | ATGACTTCAACGAGGCTCTCTTCATCCTCAGGCTTCTCAATACTTCTGAGCCAGCTTCTGTCCTGCACATaGCCACCTCTGGATCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: MTSTRLSSSSGFSILLSQLLSCT*PPLDPG Trigger: CCCAGGATCCAGAGGTGGCCATGTGCAGGACAGAAG...CTGGCTCAGAAGTATTGAGAAGCCTGAGGATGAAGAGAGCCTCGTTGAAGTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR CCA 90 bp | GGAAACCTCCTAGAAGACTGTACCCGGTGCCCAGACCAGCAGTACCTAGAACGTTCGTTTGTTGCAGTCTaGGCACTGAAACGGCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: GNLLEDCTRCPDQQYLERSFVAV*ALKRLF Trigger: GAAAAGCCGTTTCAGTGCCCAGACTGCAACAAACGA...ACGTTCTAGGTACTGCTGGTCTGGGCACCGGGTACAGTCTTCTAGGAGGTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR CCA 90 bp | CGCACTTTTGGAATAACTCTGGGTAATGCTAGAAGCCCACAGGTGGATCCGGGTTGCCTGCAATCTGAGTaGACTTCTGTCCTGCACATG | + |
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Preference number: 4 (lower is better) Translates to: RTFGITLGNARSPQVDPGCLQSE*TSVLHM Trigger: CATGTGCAGGACAGAAGTCCACTCAGATTGCAGGCA...ACCCGGATCCACCTGTGGGCTTCTAGCATTACCCAGAGTTATTCCAAAAGTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR CCA 90 bp | GGAAACCTCCTAGAAGACTGTACCCGGTGCCCAGACCAGCAGTACCTAGAACGTCTTCTGCCCAGGTTCTaGAGAAAATGTCTTCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: GNLLEDCTRCPDQQYLERLLPRF*RKCLLH Trigger: ATGCAGAAGACATTTTCTCCAGAACCTGGGCAGAAG...ACGTTCTAGGTACTGCTGGTCTGGGCACCGGGTACAGTCTTCTAGGAGGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR GCA 90 bp | CATAGGTTCAATCCTCTGGGCCTCAAACAATGTACATATTTCACCCTCTATGTTGTATGGCCCGGTGCCTaGTCAGGGAAGATGGCCGAC | + |
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Preference number: 4 (lower is better) Translates to: HRFNPLGLKQCTYFTLYVVWPGA*SGKMAD Trigger: GTCGGCCATCTTCCCTGAGCAGGCACCGGGCCATAC...AACATAGAGGGTGAAATATGTACATTGTTTGAGGCCCAGAGGATTGAACCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR GCA 90 bp | GGAAACCTCCTAGAAGACTGTACCCGGTGCCCAGACCAGCAGTACCTAGAACGTAAATGTCTTCTGCATTaGTTCAGTCTCTTCTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: GNLLEDCTRCPDQQYLERKCLLH*FSLFSW Trigger: CCAAGAGAAGAGACTGAAGCAATGCAGAAGACATTT...ACGTTCTAGGTACTGCTGGTCTGGGCACCGGGTACAGTCTTCTAGGAGGTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR GCA 90 bp | CAGGAAGATGCCATAGGTTCAATCCTCTGGGCCTCAAACAATGTACATATTTCAGTGAGTGTACATGTGTaGCTCCAACGTGGACCGCCG | + |
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Preference number: 4 (lower is better) Translates to: QEDAIGSILWASNNVHISVSVHV*LQRGPP Trigger: CGGCGGTCCACGTTGGAGGCACACATGTACACTCAC...TGAAATATGTACATTGTTTGAGGCCCAGAGGATTGAACCTATGGCATCTTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR GCA 90 bp | ATGACTTCAACGAGGCTCTCTTCATCCTCAGGCTTCTCAATACTTCTGAGCCAGTGCCGAAGCATTTGTTaGAGTCTGGGCACTGAAACG | + |
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Preference number: 4 (lower is better) Translates to: MTSTRLSSSSGFSILLSQCRSIC*SLGTET Trigger: CGTTTCAGTGCCCAGACTGCAACAAATGCTTCGGCA...CTGGCTCAGAAGTATTGAGAAGCCTGAGGATGAAGAGAGCCTCGTTGAAGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR CCA 90 bp | CAGGAAGATGCCATAGGTTCAATCCTCTGGGCCTCAAACAATGTACATATTTCATGGAGCCTAGAGCGCTaGCTGAAGCAGCGTCCACAA | + |
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Preference number: 4 (lower is better) Translates to: QEDAIGSILWASNNVHISWSLER*LKQRPQ Trigger: TTGTGGACGCTGCTTCAGCCAGCGCTCTAGGCTCCA...TGAAATATGTACATTGTTTGAGGCCCAGAGGATTGAACCTATGGCATCTTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR GCA 90 bp | CTCTGCATTAAAGACACAATGACTTCAACGAGGCTCTCTTCATCCTCAGGCTTCGGCCAAATCGTTTGTTaGAGTCTGGGCACTGAAACG | + |
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Preference number: 4 (lower is better) Translates to: LCIKDTMTSTRLSSSSGFGQIVC*SLGTET Trigger: CGTTTCAGTGCCCAGACTGCAACAAACGATTTGGCC...GAAGCCTGAGGATGAAGAGAGCCTCGTTGAAGTCATTGTGTCTTTAATGCAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR CCA 90 bp | CATAGGTTCAATCCTCTGGGCCTCAAACAATGTACATATTTCACCCTCTATGTTGGCTTCTCACCTGTATaGATGCGCATGTGGCGCCGA | + |
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Preference number: 4 (lower is better) Translates to: HRFNPLGLKQCTYFTLYVGFSPV*MRMWRR Trigger: TCGGCGCCACATGCGCATCCATACAGGTGAGAAGCC...AACATAGAGGGTGAAATATGTACATTGTTTGAGGCCCAGAGGATTGAACCTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR TCA 90 bp | CAGGAAGATGCCATAGGTTCAATCCTCTGGGCCTCAAACAATGTACATATTTCAGGCTTTTCACCTGTGTaGGAGTACATGTGTGCCACC | + |
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Preference number: 4 (lower is better) Translates to: QEDAIGSILWASNNVHISGFSPV*EYMCAT Trigger: GGTGGCACACATGTACTCTCACACAGGTGAAAAGCC...TGAAATATGTACATTGTTTGAGGCCCAGAGGATTGAACCTATGGCATCTTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR GCA 90 bp | CTCTGCATTAAAGACACAATGACTTCAACGAGGCTCTCTTCATCCTCAGGCTTCTTCCTTTCCTTCTCGTaGCTGCAATCTGAGTGGACT | + |
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Preference number: 4 (lower is better) Translates to: LCIKDTMTSTRLSSSSGFFLSFS*LQSEWT Trigger: AGTCCACTCAGATTGCAGGCACGAGAAGGAAAGGAA...GAAGCCTGAGGATGAAGAGAGCCTCGTTGAAGTCATTGTGTCTTTAATGCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR GCA 90 bp | CGCACTTTTGGAATAACTCTGGGTAATGCTAGAAGCCCACAGGTGGATCCGGGTGGAGAAAATGTCTTCTaGATTGCTTCAGTCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: RTFGITLGNARSPQVDPGGENVF*IASVSS Trigger: AGAAGAGACTGAAGCAATGCAGAAGACATTTTCTCC...ACCCGGATCCACCTGTGGGCTTCTAGCATTACCCAGAGTTATTCCAAAAGTGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR GCA 90 bp | CTCTGCATTAAAGACACAATGACTTCAACGAGGCTCTCTTCATCCTCAGGCTTCTCAGGGAGGAATACCTaGCGAAGCATTTGTTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: LCIKDTMTSTRLSSSSGFSGRNT*RSICCS Trigger: ACTGCAACAAATGCTTCGGCAGGTATTCCTCCCTGA...GAAGCCTGAGGATGAAGAGAGCCTCGTTGAAGTCATTGTGTCTTTAATGCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR TCA 90 bp | CATAGGTTCAATCCTCTGGGCCTCAAACAATGTACATATTTCACCCTCTATGTTGGCTTTTCACCTGTGTaGGTGTACATGTGTGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: HRFNPLGLKQCTYFTLYVGFSPV*VYMCAS Trigger: GGAGGCACACATGTACACTCACACAGGTGAAAAGCC...AACATAGAGGGTGAAATATGTACATTGTTTGAGGCCCAGAGGATTGAACCTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR GCA 90 bp | CATAGGTTCAATCCTCTGGGCCTCAAACAATGTACATATTTCACCCTCTATGTTGTGAGAGTACATGTGTaGCACCAAAGTGCACCGCTG | + |
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Preference number: 4 (lower is better) Translates to: HRFNPLGLKQCTYFTLYVVRVHV*HQSAPL Trigger: CAGCGGTGCACTTTGGTGGCACACATGTACTCTCAC...AACATAGAGGGTGAAATATGTACATTGTTTGAGGCCCAGAGGATTGAACCTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| 3UTR CAA 72 bp | TGGGCCTCAAACAATGTACATATTTCACCCTCTATGTaGGCGCCTTTAAGACCATCACCCGCACTTTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: WASNNVHISPSM*APLRPSPALLE Trigger: TTCCAAAAGTGCGGGTGATGGTCTTAAAGGCGCCAACATAGAGGGTGAAATATGTACATTGTTTGAGGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| 3UTR CAA 72 bp | TTCCTTCTTTGCCATCCAATTTCATACAAGCCCTCCTaGATTGAGAAAATCCTAAAATCCACTGTCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: FLLCHPISYKPS*IEKILKSTVFQ Trigger: CTGGAAGACAGTGGATTTTAGGATTTTCTCAATCAAGGAGGGCTTGTATGAAATTGGATGGCAAAGAAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS CCA 90 bp | GAAACGGCTTTTCACCTGTGTGAGTGTACATGTGTGCCTCCAACGTaGACCGCCGGGCAAAACTCTTCCCACACAAATGGCACCCGTGAC | + |
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Preference number: 5 (lower is better) Translates to: ETAFHLCECTCVPPT*TAGQNSSHTNGTRD Trigger: GTCACGGGTGCCATTTGTGTGGGAAGAGTTTTGCCCGGCGGTCCACGTTGGAGGCACACATGTACACTCACACAGGTGAAAAGCCGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR CAA 90 bp | CTCTGCATTAAAGACACAATGACTTCAACGAGGCTCTCTTCATCCTCAGGCTTCCCCACAGTCAGGACATaGGTGCGGCCGTTCCCCTCG | + |
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Preference number: 5 (lower is better) Translates to: LCIKDTMTSTRLSSSSGFPTVRT*VRPFPS Trigger: CGAGGGGAACGGCCGCACCAATGTCCTGACTGTGGG...GAAGCCTGAGGATGAAGAGAGCCTCGTTGAAGTCATTGTGTCTTTAATGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS-3UTR CAA 90 bp | CAGGAAGATGCCATAGGTTCAATCCTCTGGGCCTCAAACAATGTACATATTTCACAGCAATCAGGGCAATaGAATGACTTTTCGCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: QEDAIGSILWASNNVHISQQSGQ*NDFSPV Trigger: CACAGGCGAAAAGTCATTCAATTGCCCTGATTGCTG...TGAAATATGTACATTGTTTGAGGCCCAGAGGATTGAACCTATGGCATCTTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS GCA 72 bp | GAAAAGGGGGTCACACCGCTGTGTACCACTCGCTGGTaGTCATGGAGCCTAGAGCGCTGGCTGAAGCAGCGT | + |
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Preference number: 6 (lower is better) Translates to: EKGVTPLCTTRW*SWSLERWLKQR Trigger: ACGCTGCTTCAGCCAGCGCTCTAGGCTCCATGAGCACCAGCGAGTGGTACACAGCGGTGTGACCCCCTTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS CCA 72 bp | CAAGAAAAGGGGGTCACACCGCTGTGTACCACTCGCTaGTGCTCATGGAGCCTAGAGCGCTGGCTGAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: QEKGVTPLCTTR*CSWSLERWLKQ Trigger: CTGCTTCAGCCAGCGCTCTAGGCTCCATGAGCACCAGCGAGTGGTACACAGCGGTGTGACCCCCTTTTCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS GCA 72 bp | CTGAAACGGCTTTTCACCTGTGTGAGTGTACATGTGTaGCTCCAACGTGGACCGCCGGGCAAAACTCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: LKRLFTCVSVHV*LQRGPPGKTLP Trigger: GGGAAGAGTTTTGCCCGGCGGTCCACGTTGGAGGCACACATGTACACTCACACAGGTGAAAAGCCGTTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS GCA 72 bp | TGTGGCGCCGAAGATATTTGGAATCCGCAAAGGCACTaGCACAGTGAGTGCAAGAAAAGGGGGTCACACCGC | + |
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Preference number: 6 (lower is better) Translates to: CGAEDIWNPQRH*HSECKKRGSHR Trigger: GCGGTGTGACCCCCTTTTCTTGCACTCACTGTGGCAGTGCCTTTGCGGATTCCAAATATCTTCGGCGCCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS CCA 72 bp | GGTCTCTTCCTTTCCTTCTCGTGCCTGCAATCTGAGTaGACTTCTGTCCTGCACATGGCCACCTCTGGATCC | + |
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Preference number: 6 (lower is better) Translates to: GLFLSFSCLQSE*TSVLHMATSGS Trigger: GGATCCAGAGGTGGCCATGTGCAGGACAGAAGTCCACTCAGATTGCAGGCACGAGAAGGAAAGGAAGAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067425.6 ENSMUST00000205832.2 |
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| CDS CCA 72 bp | TTTCACCTGTGTGAGTGTACATGTGTGCCTCCAACGTaGACCGCCGGGCAAAACTCTTCCCACACAAATGGC | + |
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Preference number: 6 (lower is better) Translates to: FHLCECTCVPPT*TAGQNSSHTNG Trigger: GCCATTTGTGTGGGAAGAGTTTTGCCCGGCGGTCCACGTTGGAGGCACACATGTACACTCACACAGGTGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS GCA 72 bp | CTGAAACGGCTTTTCACCTGTGTGAGAGTACATGTGTaGCACCAAAGTGCACCGCTGGGTAAAACCCTTCCC | + |
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Preference number: 6 (lower is better) Translates to: LKRLFTCVRVHV*HQSAPLGKTLP Trigger: GGGAAGGGTTTTACCCAGCGGTGCACTTTGGTGGCACACATGTACTCTCACACAGGTGAAAAGCCGTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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| CDS GCA 72 bp | GATATTTGGAATCCGCAAAGGCACTGCCACAGTGAGTaGAAGAAAAGGGGGTCACACCGCTGTGTACCACTC | + |
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Preference number: 6 (lower is better) Translates to: DIWNPQRHCHSE*KKRGSHRCVPL Trigger: GAGTGGTACACAGCGGTGTGACCCCCTTTTCTTGCACTCACTGTGGCAGTGCCTTTGCGGATTCCAAATATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067425.6 |
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