RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP746 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000057691

Ensembl transcript IDs: ENSMUST00000073124.9, ENSMUST00000203033.2, ENSMUST00000203609.3

Found 260 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AACATGCCTGGACAGACCTGGAACTCAACCTCCCATAGGGCTGTGTaGTCCATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTA +
Preference number: 1 (lower is better)
Translates to: NMPGQTWNSTSHRAV*SMAGSALLPLTIFL
Trigger: TAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCATGGACCACACAGCCCTATGGGAGGTTGAGTTCCAGGTCTGTCCAGGCATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR GCA 90 bp CAAGTCTCCCTTTTTGCTTCTGAGCTTTCAGGCCATCCTGCTATCTaGACTCAGGACTGTACATTCGTGGCCTGCAAGGGCCACAGGAGG +
Preference number: 1 (lower is better)
Translates to: QVSLFASELSGHPAI*TQDCTFVACKGHRR
Trigger: CCTCCTGTGGCCCTTGCAGGCCACGAATGTACAGTCCTGAGTGCAGATAGCAGGATGGCCTGAAAGCTCAGAAGCAAAAAGGGAGACTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR GCA 90 bp CCCTCTTCAGGGAGTCATTACCCATTTGGGCAAGAGACCAGTGGCTaGTTTAACAAAATGGGAATGGCTATGTGTGGTGGGGACAGCACT +
Preference number: 1 (lower is better)
Translates to: PSSGSHYPFGQETSG*FNKMGMAMCGGDST
Trigger: AGTGCTGTCCCCACCACACATAGCCATTCCCATTTTGTTAAAGCAGCCACTGGTCTCTTGCCCAAATGGGTAATGACTCCCTGAAGAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR CCA 90 bp CAGAAGCATCTGTGGGTAATGGAGATAGCCCAAGATGGGAGGCCCTaGCTTCCTGTGACTTCAGATCTAACACTACTACAGCTCCATATG +
Preference number: 1 (lower is better)
Translates to: QKHLWVMEIAQDGRP*LPVTSDLTLLQLHM
Trigger: CATATGGAGCTGTAGTAGTGTTAGATCTGAAGTCACAGGAAGCCAGGGCCTCCCATCTTGGGCTATCTCCATTACCCACAGATGCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR GCA 90 bp TCTAATAAAAGTATGCAGAAGGAGCTGAATGGGTGCCATGGTCTCTaGCCTCTTCAGGGAGTCATTACCCATTTGGGCAAGAGACCAGTG +
Preference number: 1 (lower is better)
Translates to: SNKSMQKELNGCHGL*PLQGVITHLGKRPV
Trigger: CACTGGTCTCTTGCCCAAATGGGTAATGACTCCCTGAAGAGGGCAGAGACCATGGCACCCATTCAGCTCCTTCTGCATACTTTTATTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR CCA 90 bp AGATCTCAAAACCTTTCCTTCCCTAAACCATTGTTCCAGGAGAACTaGTTATCAGCTGCGGCTCTTCCCAGCTCCTACAATACAGTACTC +
Preference number: 1 (lower is better)
Translates to: RSQNLSFPKPLFQEN*LSAAALPSSYNTVL
Trigger: GAGTACTGTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATAACCAGTTCTCCTGGAACAATGGTTTAGGGAAGGAAAGGTTTTGAGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR TCA 90 bp TTAACAAAATGGGAATGGCTATGTGTGGTGGGGACAGCACTGTTATaGCAGAAACTTGGACCTAGCTCTAATTCCACTGTGAAGATACTC +
Preference number: 1 (lower is better)
Translates to: LTKWEWLCVVGTALL*QKLGPSSNSTVKIL
Trigger: GAGTATCTTCACAGTGGAATTAGAGCTAGGTCCAAGTTTCTGTCATAACAGTGCTGTCCCCACCACACATAGCCATTCCCATTTTGTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR CCA 90 bp AGCCCCAACATGCCTGGACAGACCTGGAACTCAACCTCCCATAGGGCTGTGTGGAGGACTGTACATTCGTaGCCTGCAAGGGCCACAGGA +
Preference number: 2 (lower is better)
Translates to: SPNMPGQTWNSTSHRAVWRTVHS*PARATG
Trigger: TCCTGTGGCCCTTGCAGGCCACGAATGTACAGTCCT...CCACACAGCCCTATGGGAGGTTGAGTTCCAGGTCTGTCCAGGCATGTTGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR CCA 90 bp GGGTGCCATGGTCTCTGCCCTCTTCAGGGAGTCATTACCCATTTGGGCAAGAGAGGAGATAGCCCAAGATaGGAGGCCCTGGCTTCCTGT +
Preference number: 2 (lower is better)
Translates to: GCHGLCPLQGVITHLGKRGDSPR*EALASC
Trigger: ACAGGAAGCCAGGGCCTCCCATCTTGGGCTATCTCC...TCTCTTGCCCAAATGGGTAATGACTCCCTGAAGAGGGCAGAGACCATGGCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR GCA 90 bp AGCCCCAACATGCCTGGACAGACCTGGAACTCAACCTCCCATAGGGCTGTGTGGGGCCATCCTGCTATCTaGACTCAGGACTGTACATTC +
Preference number: 2 (lower is better)
Translates to: SPNMPGQTWNSTSHRAVWGHPAI*TQDCTF
Trigger: GAATGTACAGTCCTGAGTGCAGATAGCAGGATGGCC...CCACACAGCCCTATGGGAGGTTGAGTTCCAGGTCTGTCCAGGCATGTTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR CCA 90 bp GTGGTCCATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACACTGGTAGGACTGTACATTCGTaGCCTGCAAGGGCCACAGGA +
Preference number: 2 (lower is better)
Translates to: VVHGWECPSPTDHLSNTGRTVHS*PARATG
Trigger: TCCTGTGGCCCTTGCAGGCCACGAATGTACAGTCCT...ACCAGTGTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCATGGACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR GCA 90 bp ATCCAACTACCTCCTGCATGTCTAGTGATGCATAAGCACACACAGGGGCTGTCCGTCCATGGCTGGGAGTaGCCTTCTCCCACTGACCAT +
Preference number: 2 (lower is better)
Translates to: IQLPPACLVMHKHTQGLSVHGWE*PSPTDH
Trigger: ATGGTCAGTGGGAGAAGGGCACTCCCAGCCATGGAC...GGACAGCCCCTGTGTGTGCTTATGCATCACTAGACATGCAGGAGGTAGTTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR CCA 90 bp TATCAGCTGCGGCTCTTCCCAGCTCCTACAATACAGTACTCATGGAGAGAGGCTTGTGTGGTCCATGGCTaGGAGTGCCCTTCTCCCACT +
Preference number: 2 (lower is better)
Translates to: YQLRLFPAPTIQYSWREACVVHG*ECPSPT
Trigger: AGTGGGAGAAGGGCACTCCCAGCCATGGACCACACA...AGCCTCTCTCCATGAGTACTGTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR CCA 90 bp GGGTGCCATGGTCTCTGCCCTCTTCAGGGAGTCATTACCCATTTGGGCAAGAGAATGCCTGGACAGACCTaGAACTCAACCTCCCATAGG +
Preference number: 2 (lower is better)
Translates to: GCHGLCPLQGVITHLGKRMPGQT*NSTSHR
Trigger: CCTATGGGAGGTTGAGTTCCAGGTCTGTCCAGGCAT...TCTCTTGCCCAAATGGGTAATGACTCCCTGAAGAGGGCAGAGACCATGGCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR TCA 90 bp GGGTGCCATGGTCTCTGCCCTCTTCAGGGAGTCATTACCCATTTGGGCAAGAGATGGTTAATGGTGGGATaGGATGTGAGGTGGAACCAG +
Preference number: 2 (lower is better)
Translates to: GCHGLCPLQGVITHLGKRWLMVG*DVRWNQ
Trigger: CTGGTTCCACCTCACATCTCATCCCACCATTAACCA...TCTCTTGCCCAAATGGGTAATGACTCCCTGAAGAGGGCAGAGACCATGGCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR TCA 90 bp GGGAGGCCCTGGCTTCCTGTGACTTCAGATCTAACACTACTACAGCTCCATATGCTCCCTTTTTGCTTCTaGGCTTTCAGGCCATCCTGC +
Preference number: 2 (lower is better)
Translates to: GRPWLPVTSDLTLLQLHMLPFCF*AFRPSC
Trigger: GCAGGATGGCCTGAAAGCTCAGAAGCAAAAAGGGAG...CATATGGAGCTGTAGTAGTGTTAGATCTGAAGTCACAGGAAGCCAGGGCCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR TCA 90 bp AGCCCCAACATGCCTGGACAGACCTGGAACTCAACCTCCCATAGGGCTGTGTGGGATAGTCTTTTCCAGTaGTCAGTTCAGCAACATGGA +
Preference number: 2 (lower is better)
Translates to: SPNMPGQTWNSTSHRAVWDSLFQ*SVQQHG
Trigger: TCCATGTTGCTGAACTGATCACTGGAAAAGACTATC...CCACACAGCCCTATGGGAGGTTGAGTTCCAGGTCTGTCCAGGCATGTTGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR GCA 90 bp ATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACACTGGTAAGACACGCTTTCAGGCCATCCTaGTATCTGCACTCAGGACTG +
Preference number: 2 (lower is better)
Translates to: MAGSALLPLTIFLTLVRHAFRPS*YLHSGL
Trigger: CAGTCCTGAGTGCAGATAGCAGGATGGCCTGAAAGC...GTGTCTTACCAGTGTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR GCA 90 bp GGGAGGCCCTGGCTTCCTGTGACTTCAGATCTAACACTACTACAGCTCCATATGGCTTTCAGGCCATCCTaGTATCTGCACTCAGGACTG +
Preference number: 2 (lower is better)
Translates to: GRPWLPVTSDLTLLQLHMAFRPS*YLHSGL
Trigger: CAGTCCTGAGTGCAGATAGCAGGATGGCCTGAAAGC...CATATGGAGCTGTAGTAGTGTTAGATCTGAAGTCACAGGAAGCCAGGGCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR TCA 90 bp GTACTCATGGAGAGAGGCTGTGTCCCCTCTGAGCCCTTTATTTCCTATTCTCTATGGTGGGATGAGATGTaGGGTGGAACCAGTGAAGCC +
Preference number: 2 (lower is better)
Translates to: VLMERGCVPSEPFISYSLWWDEM*GGTSEA
Trigger: GGCTTCACTGGTTCCACCTCACATCTCATCCCACCA...TAGAGAATAGGAAATAAAGGGCTCAGAGGGGACACAGCCTCTCTCCATGAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR GCA 90 bp GGGTGCCATGGTCTCTGCCCTCTTCAGGGAGTCATTACCCATTTGGGCAAGAGAAACTGCCTGTCTGCCTaGTTTCCAAAGTCATGGTTA +
Preference number: 2 (lower is better)
Translates to: GCHGLCPLQGVITHLGKRNCLSA*FPKSWL
Trigger: TAACCATGACTTTGGAAAGCAGGCAGACAGGCAGTT...TCTCTTGCCCAAATGGGTAATGACTCCCTGAAGAGGGCAGAGACCATGGCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR GCA 90 bp GGGTGCCATGGTCTCTGCCCTCTTCAGGGAGTCATTACCCATTTGGGCAAGAGATTCTCTAAGAAGAACTaGCTGTCTGCCTGCTTTCCA +
Preference number: 2 (lower is better)
Translates to: GCHGLCPLQGVITHLGKRFSKKN*LSACFP
Trigger: TGGAAAGCAGGCAGACAGGCAGTTCTTCTTAGAGAA...TCTCTTGCCCAAATGGGTAATGACTCCCTGAAGAGGGCAGAGACCATGGCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR CCA 90 bp TACCCATTTGGGCAAGAGACCAGTGGCTGCTTTAACAAAATGGGAATGGCTATGGGAGATAGCCCAAGATaGGAGGCCCTGGCTTCCTGT +
Preference number: 2 (lower is better)
Translates to: YPFGQETSGCFNKMGMAMGDSPR*EALASC
Trigger: ACAGGAAGCCAGGGCCTCCCATCTTGGGCTATCTCC...CATAGCCATTCCCATTTTGTTAAAGCAGCCACTGGTCTCTTGCCCAAATGGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR CAA 90 bp AATGGGTGCCATGGTCTCTGCCCTCTTCAGGGAGTCATTACCCATTaGGGCAAGAGACCAGTGGCTGCTTTAACAAAATGGGAATGGCTA +
Preference number: 2 (lower is better)
Translates to: NGCHGLCPLQGVITH*GKRPVAALTKWEWL
Trigger: TAGCCATTCCCATTTTGTTAAAGCAGCCACTGGTCTCTTGCCCAAATGGGTAATGACTCCCTGAAGAGGGCAGAGACCATGGCACCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR TCA 90 bp GGGTGCCATGGTCTCTGCCCTCTTCAGGGAGTCATTACCCATTTGGGCAAGAGAGATCCTATACGGTGTTaGGTTTCACAGTTGGAATTC +
Preference number: 2 (lower is better)
Translates to: GCHGLCPLQGVITHLGKRDPIRC*VSQLEF
Trigger: GAATTCCAACTGTGAAACTCAACACCGTATAGGATC...TCTCTTGCCCAAATGGGTAATGACTCCCTGAAGAGGGCAGAGACCATGGCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR CCA 90 bp AGCCCCAACATGCCTGGACAGACCTGGAACTCAACCTCCCATAGGGCTGTGTGGGTTGAGTTTCACAGTTaGAATTCTACTTTAAGGTGG +
Preference number: 2 (lower is better)
Translates to: SPNMPGQTWNSTSHRAVWVEFHS*NSTLRW
Trigger: CCACCTTAAAGTAGAATTCCAACTGTGAAACTCAAC...CCACACAGCCCTATGGGAGGTTGAGTTCCAGGTCTGTCCAGGCATGTTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR CAA 90 bp TTCTTAGCCAGGCCAAGGAGTCACTACTATAGTGGAGTTACCACCTaGGACAGGTACCACAGATGGCTCAAAACAGGAAAAAGTCAGGCC +
Preference number: 2 (lower is better)
Translates to: FLARPRSHYYSGVTT*DRYHRWLKTGKSQA
Trigger: GGCCTGACTTTTTCCTGTTTTGAGCCATCTGTGGTACCTGTCCAAGGTGGTAACTCCACTATAGTAGTGACTCCTTGGCCTGGCTAAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR TCA 90 bp GGGAGGCCCTGGCTTCCTGTGACTTCAGATCTAACACTACTACAGCTCCATATGGTGAACATACACCTCTaGAAGCCACACCTCAAAATC +
Preference number: 2 (lower is better)
Translates to: GRPWLPVTSDLTLLQLHMVNIHL*KPHLKI
Trigger: GATTTTGAGGTGTGGCTTTCAGAGGTGTATGTTCAC...CATATGGAGCTGTAGTAGTGTTAGATCTGAAGTCACAGGAAGCCAGGGCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR GCA 90 bp ATCCAACTACCTCCTGCATGTCTAGTGATGCATAAGCACACACAGGGGCTGTCCAACTGCCTGTCTGCCTaGTTTCCAAAGTCATGGTTA +
Preference number: 2 (lower is better)
Translates to: IQLPPACLVMHKHTQGLSNCLSA*FPKSWL
Trigger: TAACCATGACTTTGGAAAGCAGGCAGACAGGCAGTT...GGACAGCCCCTGTGTGTGCTTATGCATCACTAGACATGCAGGAGGTAGTTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR CAA 90 bp CAGTTCAGCAACATGGAAATTTGGTTCTCTGCCAAGTCTCCCTTTTaGCTTCTGAGCTTTCAGGCCATCCTGCTATCTGCACTCAGGACT +
Preference number: 2 (lower is better)
Translates to: QFSNMEIWFSAKSPF*LLSFQAILLSALRT
Trigger: AGTCCTGAGTGCAGATAGCAGGATGGCCTGAAAGCTCAGAAGCAAAAAGGGAGACTTGGCAGAGAACCAAATTTCCATGTTGCTGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR CAA 90 bp TCTTTTCAGAGGGTAAGATCTCAAAACCTTTCCTTCCCTAAACCATaGTTCCAGGAGAACTGGTTATCAGCTGCGGCTCTTCCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: SFQRVRSQNLSFPKP*FQENWLSAAALPSS
Trigger: GGAGCTGGGAAGAGCCGCAGCTGATAACCAGTTCTCCTGGAACAATGGTTTAGGGAAGGAAAGGTTTTGAGATCTTACCCTCTGAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR TCA 90 bp TATCAGCTGCGGCTCTTCCCAGCTCCTACAATACAGTACTCATGGAGAGAGGCTGATAGTCTTTTCCAGTaGTCAGTTCAGCAACATGGA +
Preference number: 2 (lower is better)
Translates to: YQLRLFPAPTIQYSWREADSLFQ*SVQQHG
Trigger: TCCATGTTGCTGAACTGATCACTGGAAAAGACTATC...AGCCTCTCTCCATGAGTACTGTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR TCA 90 bp GAACTGCCTGTCTGCCTGCTTTCCAAAGTCATGGTTAATGGTGGGATGAGATGTACTGGTAAGACACGGTaGACATACACCTCTGAAAGC +
Preference number: 2 (lower is better)
Translates to: ELPVCLLSKVMVNGGMRCTGKTR*TYTSES
Trigger: GCTTTCAGAGGTGTATGTTCACCGTGTCTTACCAGT...ACATCTCATCCCACCATTAACCATGACTTTGGAAAGCAGGCAGACAGGCAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR TCA 90 bp TACCCATTTGGGCAAGAGACCAGTGGCTGCTTTAACAAAATGGGAATGGCTATGAGGCTGTGTCCCCTCTaGGCCCTTTATTTCCTATTC +
Preference number: 2 (lower is better)
Translates to: YPFGQETSGCFNKMGMAMRLCPL*ALYFLF
Trigger: GAATAGGAAATAAAGGGCTCAGAGGGGACACAGCCT...CATAGCCATTCCCATTTTGTTAAAGCAGCCACTGGTCTCTTGCCCAAATGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR GCA 90 bp ATTGTTCCAGGAGAACTGGTTATCAGCTGCGGCTCTTCCCAGCTCCTACAATACTTCTCTAAGAAGAACTaGCTGTCTGCCTGCTTTCCA +
Preference number: 2 (lower is better)
Translates to: IVPGELVISCGSSQLLQYFSKKN*LSACFP
Trigger: TGGAAAGCAGGCAGACAGGCAGTTCTTCTTAGAGAA...GTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATAACCAGTTCTCCTGGAACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR TCA 90 bp GTACTCATGGAGAGAGGCTGTGTCCCCTCTGAGCCCTTTATTTCCTATTCTCTAGTGAACATACACCTCTaGAAGCCACACCTCAAAATC +
Preference number: 2 (lower is better)
Translates to: VLMERGCVPSEPFISYSLVNIHL*KPHLKI
Trigger: GATTTTGAGGTGTGGCTTTCAGAGGTGTATGTTCAC...TAGAGAATAGGAAATAAAGGGCTCAGAGGGGACACAGCCTCTCTCCATGAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR TCA 90 bp ATTGTTCCAGGAGAACTGGTTATCAGCTGCGGCTCTTCCCAGCTCCTACAATACGTGAGGTGGAACCAGTaGAGCCATTTTGAAAATGAA +
Preference number: 2 (lower is better)
Translates to: IVPGELVISCGSSQLLQYVRWNQ*SHFENE
Trigger: TTCATTTTCAAAATGGCTTCACTGGTTCCACCTCAC...GTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATAACCAGTTCTCCTGGAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR GCA 90 bp TACCCATTTGGGCAAGAGACCAGTGGCTGCTTTAACAAAATGGGAATGGCTATGGAAGAACTGCCTGTCTaGCTGCTTTCCAAAGTCATG +
Preference number: 2 (lower is better)
Translates to: YPFGQETSGCFNKMGMAMEELPV*LLSKVM
Trigger: CATGACTTTGGAAAGCAGGCAGACAGGCAGTTCTTC...CATAGCCATTCCCATTTTGTTAAAGCAGCCACTGGTCTCTTGCCCAAATGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR CCA 90 bp TACCCATTTGGGCAAGAGACCAGTGGCTGCTTTAACAAAATGGGAATGGCTATGTTGTTCCAGGAGAACTaGTTATCAGCTGCGGCTCTT +
Preference number: 2 (lower is better)
Translates to: YPFGQETSGCFNKMGMAMLFQEN*LSAAAL
Trigger: AAGAGCCGCAGCTGATAACCAGTTCTCCTGGAACAA...CATAGCCATTCCCATTTTGTTAAAGCAGCCACTGGTCTCTTGCCCAAATGGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR TCA 90 bp GTACTCATGGAGAGAGGCTGTGTCCCCTCTGAGCCCTTTATTTCCTATTCTCTAGATCCTATACGGTGTTaGGTTTCACAGTTGGAATTC +
Preference number: 2 (lower is better)
Translates to: VLMERGCVPSEPFISYSLDPIRC*VSQLEF
Trigger: GAATTCCAACTGTGAAACTCAACACCGTATAGGATC...TAGAGAATAGGAAATAAAGGGCTCAGAGGGGACACAGCCTCTCTCCATGAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR GCA 90 bp TACCCATTTGGGCAAGAGACCAGTGGCTGCTTTAACAAAATGGGAATGGCTATGGGAAATTTGGTTCTCTaGCAAGTCTCCCTTTTTGCT +
Preference number: 2 (lower is better)
Translates to: YPFGQETSGCFNKMGMAMGNLVL*QVSLFA
Trigger: AGCAAAAAGGGAGACTTGGCAGAGAACCAAATTTCC...CATAGCCATTCCCATTTTGTTAAAGCAGCCACTGGTCTCTTGCCCAAATGGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR CCA 90 bp ATTGTTCCAGGAGAACTGGTTATCAGCTGCGGCTCTTCCCAGCTCCTACAATACGTTGAGTTTCACAGTTaGAATTCTACTTTAAGGTGG +
Preference number: 2 (lower is better)
Translates to: IVPGELVISCGSSQLLQYVEFHS*NSTLRW
Trigger: CCACCTTAAAGTAGAATTCCAACTGTGAAACTCAAC...GTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATAACCAGTTCTCCTGGAACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR GCA 90 bp GAACTGCCTGTCTGCCTGCTTTCCAAAGTCATGGTTAATGGTGGGATGAGATGTAATCTAACTGGTTGTTaGTACTGTTTTCCAGCTTTT +
Preference number: 2 (lower is better)
Translates to: ELPVCLLSKVMVNGGMRCNLTGC*YCFPAF
Trigger: AAAAGCTGGAAAACAGTAGCAACAACCAGTTAGATT...ACATCTCATCCCACCATTAACCATGACTTTGGAAAGCAGGCAGACAGGCAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR CCA 72 bp GGACAGACCTGGAACTCAACCTCCCATAGGGCTGTGTaGTCCATGGCTGGGAGTGCCCTTCTCCCACTGACC +
Preference number: 3 (lower is better)
Translates to: GQTWNSTSHRAV*SMAGSALLPLT
Trigger: GGTCAGTGGGAGAAGGGCACTCCCAGCCATGGACCACACAGCCCTATGGGAGGTTGAGTTCCAGGTCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR CAA 90 bp AGCCCCAACATGCCTGGACAGACCTGGAACTCAACCTCCCATAGGGCTGTGTGGGCCAAGTCTCCCTTTTaGCTTCTGAGCTTTCAGGCC +
Preference number: 3 (lower is better)
Translates to: SPNMPGQTWNSTSHRAVWAKSPF*LLSFQA
Trigger: GGCCTGAAAGCTCAGAAGCAAAAAGGGAGACTTGGC...CCACACAGCCCTATGGGAGGTTGAGTTCCAGGTCTGTCCAGGCATGTTGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR CCA 72 bp CTGCTGAGTGTAAGCCCCAACATGCCTGGACAGACCTaGAACTCAACCTCCCATAGGGCTGTGTGGTCCATG +
Preference number: 3 (lower is better)
Translates to: LLSVSPNMPGQT*NSTSHRAVWSM
Trigger: CATGGACCACACAGCCCTATGGGAGGTTGAGTTCCAGGTCTGTCCAGGCATGTTGGGGCTTACACTCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR TCA 72 bp GGCTGTCCAGCTCGAGCTGCTGATGCAGGAGTTCTGTaGCTTGATGGCCTGATCCATGGGTGTGGCACAAAT +
Preference number: 3 (lower is better)
Translates to: GCPARAADAGVL*LDGLIHGCGTN
Trigger: ATTTGTGCCACACCCATGGATCAGGCCATCAAGTCACAGAACTCCTGCATCAGCAGCTCGAGCTGGACAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR CAA 90 bp GGGTGCCATGGTCTCTGCCCTCTTCAGGGAGTCATTACCCATTTGGGCAAGAGAGCCAAGTCTCCCTTTTaGCTTCTGAGCTTTCAGGCC +
Preference number: 3 (lower is better)
Translates to: GCHGLCPLQGVITHLGKRAKSPF*LLSFQA
Trigger: GGCCTGAAAGCTCAGAAGCAAAAAGGGAGACTTGGC...TCTCTTGCCCAAATGGGTAATGACTCCCTGAAGAGGGCAGAGACCATGGCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR GCA 72 bp CTTTTTGCTTCTGAGCTTTCAGGCCATCCTGCTATCTaGACTCAGGACTGTACATTCGTGGCCTGCAAGGGC +
Preference number: 3 (lower is better)
Translates to: LFASELSGHPAI*TQDCTFVACKG
Trigger: GCCCTTGCAGGCCACGAATGTACAGTCCTGAGTGCAGATAGCAGGATGGCCTGAAAGCTCAGAAGCAAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR GCA 72 bp AGTATGCAGAAGGAGCTGAATGGGTGCCATGGTCTCTaGCCTCTTCAGGGAGTCATTACCCATTTGGGCAAG +
Preference number: 3 (lower is better)
Translates to: SMQKELNGCHGL*PLQGVITHLGK
Trigger: CTTGCCCAAATGGGTAATGACTCCCTGAAGAGGGCAGAGACCATGGCACCCATTCAGCTCCTTCTGCATACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR CCA 72 bp CTGCGGCTCTTCCCAGCTCCTACAATACAGTACTCATaGAGAGAGGCTGTGTCCCCTCTGAGCCCTTTATTT +
Preference number: 3 (lower is better)
Translates to: LRLFPAPTIQYS*REAVSPLSPLF
Trigger: AAATAAAGGGCTCAGAGGGGACACAGCCTCTCTCCATGAGTACTGTATTGTAGGAGCTGGGAAGAGCCGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR CAA 90 bp GTGGTCCATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACACTGGTCAGCAACATGGAAATTaGGTTCTCTGCCAAGTCTCC +
Preference number: 3 (lower is better)
Translates to: VVHGWECPSPTDHLSNTGQQHGN*VLCQVS
Trigger: GGAGACTTGGCAGAGAACCAAATTTCCATGTTGCTG...ACCAGTGTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCATGGACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR CAA 90 bp AGCCCCAACATGCCTGGACAGACCTGGAACTCAACCTCCCATAGGGCTGTGTGGTCAAAATCTAACTGGTaGTTGCTACTGTTTTCCAGC +
Preference number: 3 (lower is better)
Translates to: SPNMPGQTWNSTSHRAVWSKSNW*LLLFSS
Trigger: GCTGGAAAACAGTAGCAACAACCAGTTAGATTTTGA...CCACACAGCCCTATGGGAGGTTGAGTTCCAGGTCTGTCCAGGCATGTTGGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR TCA 72 bp GAGCTGCTGATGCAGGAGTTCTGTGACTTGATGGCCTaGTCCATGGGTGTGGCACAAATCTTTTCAGAGGGT +
Preference number: 3 (lower is better)
Translates to: ELLMQEFCDLMA*SMGVAQIFSEG
Trigger: ACCCTCTGAAAAGATTTGTGCCACACCCATGGATCAGGCCATCAAGTCACAGAACTCCTGCATCAGCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR CCA 72 bp CTGTGGGTAATGGAGATAGCCCAAGATGGGAGGCCCTaGCTTCCTGTGACTTCAGATCTAACACTACTACAG +
Preference number: 3 (lower is better)
Translates to: LWVMEIAQDGRP*LPVTSDLTLLQ
Trigger: CTGTAGTAGTGTTAGATCTGAAGTCACAGGAAGCCAGGGCCTCCCATCTTGGGCTATCTCCATTACCCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR CCA 72 bp ACAGAAGCATCTGTGGGTAATGGAGATAGCCCAAGATaGGAGGCCCTGGCTTCCTGTGACTTCAGATCTAAC +
Preference number: 3 (lower is better)
Translates to: TEASVGNGDSPR*EALASCDFRSN
Trigger: GTTAGATCTGAAGTCACAGGAAGCCAGGGCCTCCCATCTTGGGCTATCTCCATTACCCACAGATGCTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR GCA 72 bp GGGAGTCATTACCCATTTGGGCAAGAGACCAGTGGCTaGTTTAACAAAATGGGAATGGCTATGTGTGGTGGG +
Preference number: 3 (lower is better)
Translates to: GSHYPFGQETSG*FNKMGMAMCGG
Trigger: CCCACCACACATAGCCATTCCCATTTTGTTAAAGCAGCCACTGGTCTCTTGCCCAAATGGGTAATGACTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR CAA 90 bp GTGGTCCATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACACTGGTAGATCCTATACGGTGTaGAGTTTCACAGTTGGAATT +
Preference number: 3 (lower is better)
Translates to: VVHGWECPSPTDHLSNTGRSYTV*SFTVGI
Trigger: AATTCCAACTGTGAAACTCAACACCGTATAGGATCT...ACCAGTGTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCATGGACCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR TCA 72 bp TGGGAATGGCTATGTGTGGTGGGGACAGCACTGTTATaGCAGAAACTTGGACCTAGCTCTAATTCCACTGTG +
Preference number: 3 (lower is better)
Translates to: WEWLCVVGTALL*QKLGPSSNSTV
Trigger: CACAGTGGAATTAGAGCTAGGTCCAAGTTTCTGTCATAACAGTGCTGTCCCCACCACACATAGCCATTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR CCA 72 bp AACCTTTCCTTCCCTAAACCATTGTTCCAGGAGAACTaGTTATCAGCTGCGGCTCTTCCCAGCTCCTACAAT +
Preference number: 3 (lower is better)
Translates to: NLSFPKPLFQEN*LSAAALPSSYN
Trigger: ATTGTAGGAGCTGGGAAGAGCCGCAGCTGATAACCAGTTCTCCTGGAACAATGGTTTAGGGAAGGAAAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR CCA 72 bp CATTTGGGCAAGAGACCAGTGGCTGCTTTAACAAAATaGGAATGGCTATGTGTGGTGGGGACAGCACTGTTA +
Preference number: 3 (lower is better)
Translates to: HLGKRPVAALTK*EWLCVVGTALL
Trigger: TAACAGTGCTGTCCCCACCACACATAGCCATTCCCATTTTGTTAAAGCAGCCACTGGTCTCTTGCCCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR CAA 90 bp GGGTGCCATGGTCTCTGCCCTCTTCAGGGAGTCATTACCCATTTGGGCAAGAGAAAATCTAACTGGTTGTaGCTACTGTTTTCCAGCTTT +
Preference number: 3 (lower is better)
Translates to: GCHGLCPLQGVITHLGKRKSNWL*LLFSSF
Trigger: AAAGCTGGAAAACAGTAGCAACAACCAGTTAGATTT...TCTCTTGCCCAAATGGGTAATGACTCCCTGAAGAGGGCAGAGACCATGGCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR CAA 90 bp TTCCAGGAGAACTGGTTATCAGCTGCGGCTCTTCCCAGCTCCTACAATACAGTAAGATCCTATACGGTGTaGAGTTTCACAGTTGGAATT +
Preference number: 3 (lower is better)
Translates to: FQENWLSAAALPSSYNTVRSYTV*SFTVGI
Trigger: AATTCCAACTGTGAAACTCAACACCGTATAGGATCT...TACTGTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATAACCAGTTCTCCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR TCA 72 bp CCCACTGACCATCTTTCTAACACTGGTAAGACACGGTaGACATACACCTCTGAAAGCCACACCTCAAAATCT +
Preference number: 3 (lower is better)
Translates to: PTDHLSNTGKTR*TYTSESHTSKS
Trigger: AGATTTTGAGGTGTGGCTTTCAGAGGTGTATGTTCACCGTGTCTTACCAGTGTTAGAAAGATGGTCAGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR TCA 72 bp CAATACAGTACTCATGGAGAGAGGCTGTGTCCCCTCTaGGCCCTTTATTTCCTATTCTCTAAGAAGAACTGC +
Preference number: 3 (lower is better)
Translates to: QYSTHGERLCPL*ALYFLFSKKNC
Trigger: GCAGTTCTTCTTAGAGAATAGGAAATAAAGGGCTCAGAGGGGACACAGCCTCTCTCCATGAGTACTGTATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR GCA 72 bp ATTTCTAATAAAAGTATGCAGAAGGAGCTGAATGGGTaGCATGGTCTCTGCCCTCTTCAGGGAGTCATTACC +
Preference number: 3 (lower is better)
Translates to: ISNKSMQKELNG*HGLCPLQGVIT
Trigger: GGTAATGACTCCCTGAAGAGGGCAGAGACCATGGCACCCATTCAGCTCCTTCTGCATACTTTTATTAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR CAA 90 bp GTACTCATGGAGAGAGGCTGTGTCCCCTCTGAGCCCTTTATTTCCTATTCTCTAAAATCTAACTGGTTGTaGCTACTGTTTTCCAGCTTT +
Preference number: 3 (lower is better)
Translates to: VLMERGCVPSEPFISYSLKSNWL*LLFSSF
Trigger: AAAGCTGGAAAACAGTAGCAACAACCAGTTAGATTT...TAGAGAATAGGAAATAAAGGGCTCAGAGGGGACACAGCCTCTCTCCATGAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR-3UTR CAA 90 bp TACCCATTTGGGCAAGAGACCAGTGGCTGCTTTAACAAAATGGGAATGGCTATGACCAGTGAAGCCATTTaGAAAATGAACATACTACAC +
Preference number: 3 (lower is better)
Translates to: YPFGQETSGCFNKMGMAMTSEAI*KMNILH
Trigger: GTGTAGTATGTTCATTTTCAAAATGGCTTCACTGGT...CATAGCCATTCCCATTTTGTTAAAGCAGCCACTGGTCTCTTGCCCAAATGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp GGCTGTGTGGTCCATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACTCCCACCTCCGCTGCTaGCTCCTCCTCCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: GCVVHGWECPSPTDHLSNSHLRC*LLLRRC
Trigger: GCAGCGGCGGAGGAGGAGGCAGCAGCGGAGGTGGGA...GTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCATGGACCACACAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp AGCCCCAACATGCCTGGACAGACCTGGAACTCAACCTCCCATAGGGCTGTGTGGGAGTGGCTGACCGTGTaGGGGCGCCTTGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: SPNMPGQTWNSTSHRAVWEWLTV*GRLGHC
Trigger: GCAGTGGCCAAGGCGCCCGCACACGGTCAGCCACTC...CCACACAGCCCTATGGGAGGTTGAGTTCCAGGTCTGTCCAGGCATGTTGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp AGCCCCAACATGCCTGGACAGACCTGGAACTCAACCTCCCATAGGGCTGTGTGGTGGAAGCTGCCCCCGTaGCCGCCCCATCGGACAGTC +
Preference number: 4 (lower is better)
Translates to: SPNMPGQTWNSTSHRAVWWKLPP*PPHRTV
Trigger: GACTGTCCGATGGGGCGGCCACGGGGGCAGCTTCCA...CCACACAGCCCTATGGGAGGTTGAGTTCCAGGTCTGTCCAGGCATGTTGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GGCTGTGTGGTCCATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACCCGCAGCTGCGCTGGTaGGCACTCAGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: GCVVHGWECPSPTDHLSNPQLRW*ALRLTC
Trigger: GCAGGTGAGCCTGAGTGCCCACCAGCGCAGCTGCGG...GTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCATGGACCACACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR TCA 90 bp AGCCCCAACATGCCTGGACAGACCTGGAACTCAACCTCCCATAGGGCTGTGTGGCACACACTGTGCAGGTaGATGGCCGCACGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: SPNMPGQTWNSTSHRAVWHTLCR*MAARPC
Trigger: ACACGGGCGTGCGGCCATTCACCTGCACAGTGTGTG...CCACACAGCCCTATGGGAGGTTGAGTTCCAGGTCTGTCCAGGCATGTTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp GTGGTCCATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACACTGGTGGGCGCCTTGGCCACTaGAGGGTGGTTGCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: VVHGWECPSPTDHLSNTGGRLGH*RVVALV
Trigger: CACCAGCGCAACCACCCTGCAGTGGCCAAGGCGCCC...ACCAGTGTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCATGGACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp AGCCCCAACATGCCTGGACAGACCTGGAACTCAACCTCCCATAGGGCTGTGTGGGCTCCAGAGTCCAACTaGCTGAGGCCCCACGGCTCT +
Preference number: 4 (lower is better)
Translates to: SPNMPGQTWNSTSHRAVWAPESN*LRPHGS
Trigger: AGAGCCGTGGGGCCTCAGCCAGTTGGACTCTGGAGC...CCACACAGCCCTATGGGAGGTTGAGTTCCAGGTCTGTCCAGGCATGTTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp TATCAGCTGCGGCTCTTCCCAGCTCCTACAATACAGTACTCATGGAGAGAGGCTGGGCCGGCCTCCGGGTaGTGCCGCCGGGTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: YQLRLFPAPTIQYSWREAGPASG*CRRVLL
Trigger: AAGAAGCACCCGGCGGCACCACCCGGAGGCCGGCCC...AGCCTCTCTCCATGAGTACTGTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GTGGTCCATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACACTGGTTGGAAGCTGCCCCCGTaGCCGCCCCATCGGACAGTC +
Preference number: 4 (lower is better)
Translates to: VVHGWECPSPTDHLSNTGWKLPP*PPHRTV
Trigger: GACTGTCCGATGGGGCGGCCACGGGGGCAGCTTCCA...ACCAGTGTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCATGGACCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GGCTGTGTGGTCCATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACGCAGGGTGGTTGCGCTaGTGCTTGCGGAGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: GCVVHGWECPSPTDHLSNAGWLR*CLRRWS
Trigger: GGACCACCTCCGCAAGCACCAGCGCAACCACCCTGC...GTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCATGGACCACACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GGCTGTGTGGTCCATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACGGTCTGTGGAGGCCATaGGTCCTTTGGCTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: GCVVHGWECPSPTDHLSNGLWRP*VLWLRG
Trigger: GCCCCGCAGCCAAAGGACCCATGGCCTCCACAGACC...GTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCATGGACCACACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp AGCCCCAACATGCCTGGACAGACCTGGAACTCAACCTCCCATAGGGCTGTGTGGGTGGGGAGGGAGATCTaGTTGCCAGGAAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: SPNMPGQTWNSTSHRAVWVGREI*LPGSGW
Trigger: CCACCCACTTCCTGGCAAGCAGATCTCCCTCCCCAC...CCACACAGCCCTATGGGAGGTTGAGTTCCAGGTCTGTCCAGGCATGTTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp ATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACACTGGTAAGACACCCGGCCTCCGGGTGGTaGCGCCGGGTGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: MAGSALLPLTIFLTLVRHPASGW*RRVLLQ
Trigger: CTGAAGAAGCACCCGGCGGCACCACCCGGAGGCCGG...GTGTCTTACCAGTGTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp GTGGTCCATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACACTGGTAGTAGTGGTGGAAGCTaGCCCCGTGGCCGCCCCATC +
Preference number: 4 (lower is better)
Translates to: VVHGWECPSPTDHLSNTGSSGGS*PRGRPI
Trigger: GATGGGGCGGCCACGGGGGCAGCTTCCACCACTACT...ACCAGTGTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCATGGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp AGCCCCAACATGCCTGGACAGACCTGGAACTCAACCTCCCATAGGGCTGTGTGGGCTGAAGAGGGGTGGTaGGGAGGGAGATCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: SPNMPGQTWNSTSHRAVWAEEGW*GGRSAC
Trigger: GCAAGCAGATCTCCCTCCCCACCACCCCTCTTCAGC...CCACACAGCCCTATGGGAGGTTGAGTTCCAGGTCTGTCCAGGCATGTTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp AGCCCCAACATGCCTGGACAGACCTGGAACTCAACCTCCCATAGGGCTGTGTGGCCTAGCACTGGGTCCTaGCTGGGGAAGGAACTGCCT +
Preference number: 4 (lower is better)
Translates to: SPNMPGQTWNSTSHRAVWPSTGS*LGKELP
Trigger: AGGCAGTTCCTTCCCCAGCCAGGACCCAGTGCTAGG...CCACACAGCCCTATGGGAGGTTGAGTTCCAGGTCTGTCCAGGCATGTTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GGCTGTGTGGTCCATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACTTGGCCACTGCAGGGTaGTTGCGCTGGTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GCVVHGWECPSPTDHLSNLATAG*LRWCLR
Trigger: CCGCAAGCACCAGCGCAACCACCCTGCAGTGGCCAA...GTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCATGGACCACACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp ATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACACTGGTAAGACACCGGCAGTGGTGGGAGTaGCTGACCGTGTGCGGGCGC +
Preference number: 4 (lower is better)
Translates to: MAGSALLPLTIFLTLVRHRQWWE*LTVCGR
Trigger: GCGCCCGCACACGGTCAGCCACTCCCACCACTGCCG...GTGTCTTACCAGTGTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp GGGTGCCATGGTCTCTGCCCTCTTCAGGGAGTCATTACCCATTTGGGCAAGAGAGCCAGTCCTCCAGCTTaGCCCACTCCTTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: GCHGLCPLQGVITHLGKRASPPA*PTPWGP
Trigger: AGGTCCCCAAGGAGTGGGGCAAGCTGGAGGACTGGC...TCTCTTGCCCAAATGGGTAATGACTCCCTGAAGAGGGCAGAGACCATGGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp GGGTGCCATGGTCTCTGCCCTCTTCAGGGAGTCATTACCCATTTGGGCAAGAGAGTGGCGGATGAGGTGTaGAGGGCGTGTGAAGCAGCG +
Preference number: 4 (lower is better)
Translates to: GCHGLCPLQGVITHLGKRVADEV*RACEAA
Trigger: CGCTGCTTCACACGCCCTGCACACCTCATCCGCCAC...TCTCTTGCCCAAATGGGTAATGACTCCCTGAAGAGGGCAGAGACCATGGCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp GTGGTCCATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACACTGGTGGTTGCGCTGGTGCTTaGGGAGGTGGTCCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: VVHGWECPSPTDHLSNTGGCAGA*GGGPCG
Trigger: TCCGCAAGGACCACCTCCGCAAGCACCAGCGCAACC...ACCAGTGTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCATGGACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp GGGAGGCCCTGGCTTCCTGTGACTTCAGATCTAACACTACTACAGCTCCATATGGGGCGCCTTGGCCACTaGAGGGTGGTTGCGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GRPWLPVTSDLTLLQLHMGRLGH*RVVALV
Trigger: CACCAGCGCAACCACCCTGCAGTGGCCAAGGCGCCC...CATATGGAGCTGTAGTAGTGTTAGATCTGAAGTCACAGGAAGCCAGGGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GGGTGCCATGGTCTCTGCCCTCTTCAGGGAGTCATTACCCATTTGGGCAAGAGAGTCTTGGGGCCTGGCTaGGGTCCAAGATGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GCHGLCPLQGVITHLGKRVLGPG*GPRWPL
Trigger: GAGAGGCCATCTTGGACCCCAGCCAGGCCCCAAGAC...TCTCTTGCCCAAATGGGTAATGACTCCCTGAAGAGGGCAGAGACCATGGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GGGTGCCATGGTCTCTGCCCTCTTCAGGGAGTCATTACCCATTTGGGCAAGAGAAAGGGTCTTGGGGCCTaGCTGGGGTCCAAGATGGCC +
Preference number: 4 (lower is better)
Translates to: GCHGLCPLQGVITHLGKRKGLGA*LGSKMA
Trigger: GGCCATCTTGGACCCCAGCCAGGCCCCAAGACCCTT...TCTCTTGCCCAAATGGGTAATGACTCCCTGAAGAGGGCAGAGACCATGGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GAACTGCCTGTCTGCCTGCTTTCCAAAGTCATGGTTAATGGTGGGATGAGATGTGGGCCGGCCTCCGGGTaGTGCCGCCGGGTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: ELPVCLLSKVMVNGGMRCGPASG*CRRVLL
Trigger: AAGAAGCACCCGGCGGCACCACCCGGAGGCCGGCCC...ACATCTCATCCCACCATTAACCATGACTTTGGAAAGCAGGCAGACAGGCAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp ATCCAACTACCTCCTGCATGTCTAGTGATGCATAAGCACACACAGGGGCTGTCCCCGCAGCTGCGCTGGTaGGCACTCAGGCTCACCTGC +
Preference number: 4 (lower is better)
Translates to: IQLPPACLVMHKHTQGLSPQLRW*ALRLTC
Trigger: GCAGGTGAGCCTGAGTGCCCACCAGCGCAGCTGCGG...GGACAGCCCCTGTGTGTGCTTATGCATCACTAGACATGCAGGAGGTAGTTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR TCA 90 bp AGCCCCAACATGCCTGGACAGACCTGGAACTCAACCTCCCATAGGGCTGTGTGGATTTGCAGGGATCATTaGAGGGTCTTGGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SPNMPGQTWNSTSHRAVWICRDH*RVLGPG
Trigger: GCCAGGCCCCAAGACCCTTCAATGATCCCTGCAAAT...CCACACAGCCCTATGGGAGGTTGAGTTCCAGGTCTGTCCAGGCATGTTGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR TCA 90 bp TTCCAGGAGAACTGGTTATCAGCTGCGGCTCTTCCCAGCTCCTACAATACAGTAAGTGGTGGGAGTGGCTaGCCGTGTGCGGGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: FQENWLSAAALPSSYNTVSGGSG*PCAGAL
Trigger: CAAGGCGCCCGCACACGGTCAGCCACTCCCACCACT...TACTGTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATAACCAGTTCTCCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp GGGAGGCCCTGGCTTCCTGTGACTTCAGATCTAACACTACTACAGCTCCATATGAGTAGTGGTGGAAGCTaGCCCCGTGGCCGCCCCATC +
Preference number: 4 (lower is better)
Translates to: GRPWLPVTSDLTLLQLHMSSGGS*PRGRPI
Trigger: GATGGGGCGGCCACGGGGGCAGCTTCCACCACTACT...CATATGGAGCTGTAGTAGTGTTAGATCTGAAGTCACAGGAAGCCAGGGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp ATCCAACTACCTCCTGCATGTCTAGTGATGCATAAGCACACACAGGGGCTGTCCAGCGCTGCTGTCCCGTaGACTGCTCCCACCTCCGCT +
Preference number: 4 (lower is better)
Translates to: IQLPPACLVMHKHTQGLSSAAVP*TAPTSA
Trigger: AGCGGAGGTGGGAGCAGTGCACGGGACAGCAGCGCT...GGACAGCCCCTGTGTGTGCTTATGCATCACTAGACATGCAGGAGGTAGTTGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp ATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACACTGGTAAGACACAGCGCTGCTGTCCCGTaGACTGCTCCCACCTCCGCT +
Preference number: 4 (lower is better)
Translates to: MAGSALLPLTIFLTLVRHSAAVP*TAPTSA
Trigger: AGCGGAGGTGGGAGCAGTGCACGGGACAGCAGCGCT...GTGTCTTACCAGTGTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GGGTGCCATGGTCTCTGCCCTCTTCAGGGAGTCATTACCCATTTGGGCAAGAGAGGCTGGGGTCCAAGATaGCCTCTCCGTTGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GCHGLCPLQGVITHLGKRGWGPR*PLRCLE
Trigger: CTCCAGACAACGGAGAGGCCATCTTGGACCCCAGCC...TCTCTTGCCCAAATGGGTAATGACTCCCTGAAGAGGGCAGAGACCATGGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp ATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACACTGGTAAGACACAGTCCGCAGCTGCGCTaGTGGGCACTCAGGCTCACC +
Preference number: 4 (lower is better)
Translates to: MAGSALLPLTIFLTLVRHSPQLR*WALRLT
Trigger: GGTGAGCCTGAGTGCCCACCAGCGCAGCTGCGGACT...GTGTCTTACCAGTGTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GTACTCATGGAGAGAGGCTGTGTCCCCTCTGAGCCCTTTATTTCCTATTCTCTACGGCAGTGGTGGGAGTaGCTGACCGTGTGCGGGCGC +
Preference number: 4 (lower is better)
Translates to: VLMERGCVPSEPFISYSLRQWWE*LTVCGR
Trigger: GCGCCCGCACACGGTCAGCCACTCCCACCACTGCCG...TAGAGAATAGGAAATAAAGGGCTCAGAGGGGACACAGCCTCTCTCCATGAGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR TCA 90 bp ATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACACTGGTAAGACACTCCAGGTCCGTGGGATaGACAGGTGTGGCCACCACC +
Preference number: 4 (lower is better)
Translates to: MAGSALLPLTIFLTLVRHSRSVG*TGVATT
Trigger: GGTGGTGGCCACACCTGTTCATCCCACGGACCTGGA...GTGTCTTACCAGTGTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR TCA 90 bp GAACTGCCTGTCTGCCTGCTTTCCAAAGTCATGGTTAATGGTGGGATGAGATGTAGTGGTGGGAGTGGCTaGCCGTGTGCGGGCGCCTTG +
Preference number: 4 (lower is better)
Translates to: ELPVCLLSKVMVNGGMRCSGGSG*PCAGAL
Trigger: CAAGGCGCCCGCACACGGTCAGCCACTCCCACCACT...ACATCTCATCCCACCATTAACCATGACTTTGGAAAGCAGGCAGACAGGCAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp ATCCAACTACCTCCTGCATGTCTAGTGATGCATAAGCACACACAGGGGCTGTCCGGACCTCGCCCTTGCTaGCTGGGGGAAGCCGAAGAA +
Preference number: 4 (lower is better)
Translates to: IQLPPACLVMHKHTQGLSGPRPC*LGEAEE
Trigger: TTCTTCGGCTTCCCCCAGGCAGCAAGGGCGAGGTCC...GGACAGCCCCTGTGTGTGCTTATGCATCACTAGACATGCAGGAGGTAGTTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp TACCCATTTGGGCAAGAGACCAGTGGCTGCTTTAACAAAATGGGAATGGCTATGTCCCACCTCCGCTGCTaGCTCCTCCTCCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: YPFGQETSGCFNKMGMAMSHLRC*LLLRRC
Trigger: GCAGCGGCGGAGGAGGAGGCAGCAGCGGAGGTGGGA...CATAGCCATTCCCATTTTGTTAAAGCAGCCACTGGTCTCTTGCCCAAATGGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp TATCAGCTGCGGCTCTTCCCAGCTCCTACAATACAGTACTCATGGAGAGAGGCTGGGTGGTTGCGCTGGTaGTTGCGGAGGTGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: YQLRLFPAPTIQYSWREAGWLRW*LRRWSL
Trigger: CAAGGACCACCTCCGCAAGCACCAGCGCAACCACCC...AGCCTCTCTCCATGAGTACTGTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp TTTGCTTCTGAGCTTTCAGGCCATCCTGCTATCTGCACTCAGGACTGTACATTCGAGTGGCTGACCGTGTaGGGGCGCCTTGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: FASELSGHPAICTQDCTFEWLTV*GRLGHC
Trigger: GCAGTGGCCAAGGCGCCCGCACACGGTCAGCCACTC...GAATGTACAGTCCTGAGTGCAGATAGCAGGATGGCCTGAAAGCTCAGAAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp ATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACACTGGTAAGACACACCAATGTCCCTCTCTaGCCGAGTGGGCTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: MAGSALLPLTIFLTLVRHTNVPL*PSGLPQ
Trigger: CTGCGGGAGCCCACTCGGCCAGAGAGGGACATTGGT...GTGTCTTACCAGTGTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp AGCCCCAACATGCCTGGACAGACCTGGAACTCAACCTCCCATAGGGCTGTGTGGCGGGTTCAGGCCCACTaGAGGTTTACACCGGAAATT +
Preference number: 4 (lower is better)
Translates to: SPNMPGQTWNSTSHRAVWRVQAH*RFTPEI
Trigger: AATTTCCGGTGTAAACCTCCAGTGGGCCTGAACCCG...CCACACAGCCCTATGGGAGGTTGAGTTCCAGGTCTGTCCAGGCATGTTGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GGGAGGCCCTGGCTTCCTGTGACTTCAGATCTAACACTACTACAGCTCCATATGGTCTTGGGGCCTGGCTaGGGTCCAAGATGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GRPWLPVTSDLTLLQLHMVLGPG*GPRWPL
Trigger: GAGAGGCCATCTTGGACCCCAGCCAGGCCCCAAGAC...CATATGGAGCTGTAGTAGTGTTAGATCTGAAGTCACAGGAAGCCAGGGCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR TCA 90 bp GGGTGCCATGGTCTCTGCCCTCTTCAGGGAGTCATTACCCATTTGGGCAAGAGAAATTCCAGCCCCACCTaGCTCCGCCAAAGAGCCAAT +
Preference number: 4 (lower is better)
Translates to: GCHGLCPLQGVITHLGKRNSSPT*LRQRAN
Trigger: ATTGGCTCTTTGGCGGAGTCAGGTGGGGCTGGAATT...TCTCTTGCCCAAATGGGTAATGACTCCCTGAAGAGGGCAGAGACCATGGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp TTCCAGGAGAACTGGTTATCAGCTGCGGCTCTTCCCAGCTCCTACAATACAGTAGTGGCGGATGAGGTGTaGAGGGCGTGTGAAGCAGCG +
Preference number: 4 (lower is better)
Translates to: FQENWLSAAALPSSYNTVVADEV*RACEAA
Trigger: CGCTGCTTCACACGCCCTGCACACCTCATCCGCCAC...TACTGTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATAACCAGTTCTCCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp ATTGTTCCAGGAGAACTGGTTATCAGCTGCGGCTCTTCCCAGCTCCTACAATACGGGTGGTTGCGCTGGTaGTTGCGGAGGTGGTCCTTG +
Preference number: 4 (lower is better)
Translates to: IVPGELVISCGSSQLLQYGWLRW*LRRWSL
Trigger: CAAGGACCACCTCCGCAAGCACCAGCGCAACCACCC...GTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATAACCAGTTCTCCTGGAACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp TTCCAGGAGAACTGGTTATCAGCTGCGGCTCTTCCCAGCTCCTACAATACAGTACCACTGCAGGGTGGTTaGGCTGGTGCTTGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: FQENWLSAAALPSSYNTVPLQGG*AGACGG
Trigger: ACCTCCGCAAGCACCAGCGCAACCACCCTGCAGTGG...TACTGTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATAACCAGTTCTCCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp ATCCAACTACCTCCTGCATGTCTAGTGATGCATAAGCACACACAGGGGCTGTCCGTCAGGGGCAGGAACTaGTGCTCCAGAGCCTGGACT +
Preference number: 4 (lower is better)
Translates to: IQLPPACLVMHKHTQGLSVRGRN*CSRAWT
Trigger: AGTCCAGGCTCTGGAGCACCAGTTCCTGCCCCTGAC...GGACAGCCCCTGTGTGTGCTTATGCATCACTAGACATGCAGGAGGTAGTTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GGGAGGCCCTGGCTTCCTGTGACTTCAGATCTAACACTACTACAGCTCCATATGGCTGAAGAGGGGTGGTaGGGAGGGAGATCTGCTTGC +
Preference number: 4 (lower is better)
Translates to: GRPWLPVTSDLTLLQLHMAEEGW*GGRSAC
Trigger: GCAAGCAGATCTCCCTCCCCACCACCCCTCTTCAGC...CATATGGAGCTGTAGTAGTGTTAGATCTGAAGTCACAGGAAGCCAGGGCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp AGCCCCAACATGCCTGGACAGACCTGGAACTCAACCTCCCATAGGGCTGTGTGGTCTTGTGGCTTGGCCTaGTGCAAACAAAGTCCCATG +
Preference number: 4 (lower is better)
Translates to: SPNMPGQTWNSTSHRAVWSCGLA*CKQSPM
Trigger: CATGGGACTTTGTTTGCACCAGGCCAAGCCACAAGA...CCACACAGCCCTATGGGAGGTTGAGTTCCAGGTCTGTCCAGGCATGTTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp TTCCAGGAGAACTGGTTATCAGCTGCGGCTCTTCCCAGCTCCTACAATACAGTAACCAATGTCCCTCTCTaGCCGAGTGGGCTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: FQENWLSAAALPSSYNTVTNVPL*PSGLPQ
Trigger: CTGCGGGAGCCCACTCGGCCAGAGAGGGACATTGGT...TACTGTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATAACCAGTTCTCCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GTACTCATGGAGAGAGGCTGTGTCCCCTCTGAGCCCTTTATTTCCTATTCTCTAAGTCCGCAGCTGCGCTaGTGGGCACTCAGGCTCACC +
Preference number: 4 (lower is better)
Translates to: VLMERGCVPSEPFISYSLSPQLR*WALRLT
Trigger: GGTGAGCCTGAGTGCCCACCAGCGCAGCTGCGGACT...TAGAGAATAGGAAATAAAGGGCTCAGAGGGGACACAGCCTCTCTCCATGAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GGGAGGCCCTGGCTTCCTGTGACTTCAGATCTAACACTACTACAGCTCCATATGGTGTGTAGCATGCGGTaGCGGATGAGGTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GRPWLPVTSDLTLLQLHMVCSMR*RMRCAG
Trigger: CCCTGCACACCTCATCCGCCACCGCATGCTACACAC...CATATGGAGCTGTAGTAGTGTTAGATCTGAAGTCACAGGAAGCCAGGGCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp TATCAGCTGCGGCTCTTCCCAGCTCCTACAATACAGTACTCATGGAGAGAGGCTGTGTGTAGCATGCGGTaGCGGATGAGGTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: YQLRLFPAPTIQYSWREAVCSMR*RMRCAG
Trigger: CCCTGCACACCTCATCCGCCACCGCATGCTACACAC...AGCCTCTCTCCATGAGTACTGTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GTGGTCCATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACACTGGTCAGTCACAAGGTCTGTaGAGGCCATGGGTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: VVHGWECPSPTDHLSNTGQSQGL*RPWVLW
Trigger: CCAAAGGACCCATGGCCTCCACAGACCTTGTGACTG...ACCAGTGTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCATGGACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR TCA 90 bp GTACTCATGGAGAGAGGCTGTGTCCCCTCTGAGCCCTTTATTTCCTATTCTCTACACACACTGTGCAGGTaGATGGCCGCACGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: VLMERGCVPSEPFISYSLHTLCR*MAARPC
Trigger: ACACGGGCGTGCGGCCATTCACCTGCACAGTGTGTG...TAGAGAATAGGAAATAAAGGGCTCAGAGGGGACACAGCCTCTCTCCATGAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR TCA 90 bp TATCAGCTGCGGCTCTTCCCAGCTCCTACAATACAGTACTCATGGAGAGAGGCTGGTGGTCCTTGCGGATaGAGCTCTTCCCACACACTG +
Preference number: 4 (lower is better)
Translates to: YQLRLFPAPTIQYSWREAGGPCG*SSSHTL
Trigger: CAGTGTGTGGGAAGAGCTTCATCCGCAAGGACCACC...AGCCTCTCTCCATGAGTACTGTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp ATCCAACTACCTCCTGCATGTCTAGTGATGCATAAGCACACACAGGGGCTGTCCTTTTCCAGCCGCCGCTaGAGCAGCCCATATTCCTGC +
Preference number: 4 (lower is better)
Translates to: IQLPPACLVMHKHTQGLSFSSRR*SSPYSC
Trigger: GCAGGAATATGGGCTGCTGCAGCGGCGGCTGGAAAA...GGACAGCCCCTGTGTGTGCTTATGCATCACTAGACATGCAGGAGGTAGTTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp GTGGTCCATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACACTGGTTGTGGAGATGTCTCCTaGTCCAGAGTCCAACTGGCT +
Preference number: 4 (lower is better)
Translates to: VVHGWECPSPTDHLSNTGCGDVS*SRVQLA
Trigger: AGCCAGTTGGACTCTGGAGCAGGAGACATCTCCACA...ACCAGTGTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCATGGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp AGCCCCAACATGCCTGGACAGACCTGGAACTCAACCTCCCATAGGGCTGTGTGGTGCTTCTGTGGATGCTaGTGTGTTGAGCTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: SPNMPGQTWNSTSHRAVWCFCGC*CVELQC
Trigger: ACACTGAAGCTCAACACAGCAGCATCCACAGAAGCA...CCACACAGCCCTATGGGAGGTTGAGTTCCAGGTCTGTCCAGGCATGTTGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073124.9
CDS-3UTR GCA 90 bp GGGAGGCCCTGGCTTCCTGTGACTTCAGATCTAACACTACTACAGCTCCATATGGCACTCAGGCTCACCTaGAGCTGGAAGCTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: GRPWLPVTSDLTLLQLHMALRLT*SWKLFP
Trigger: CGGAAAGAGCTTCCAGCTGCAGGTGAGCCTGAGTGC...CATATGGAGCTGTAGTAGTGTTAGATCTGAAGTCACAGGAAGCCAGGGCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp TTTGCTTCTGAGCTTTCAGGCCATCCTGCTATCTGCACTCAGGACTGTACATTCGGTTGCGCTGGTGCTTaGGGAGGTGGTCCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: FASELSGHPAICTQDCTFGCAGA*GGGPCG
Trigger: TCCGCAAGGACCACCTCCGCAAGCACCAGCGCAACC...GAATGTACAGTCCTGAGTGCAGATAGCAGGATGGCCTGAAAGCTCAGAAGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp ATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACACTGGTAAGACACTGGTGCTCCAGAGCCTaGACTTGGGTCCACAGGAAC +
Preference number: 4 (lower is better)
Translates to: MAGSALLPLTIFLTLVRHWCSRA*TWVHRN
Trigger: GTTCCTGTGGACCCAAGTCCAGGCTCTGGAGCACCA...GTGTCTTACCAGTGTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GGAAATTTGGTTCTCTGCCAAGTCTCCCTTTTTGCTTCTGAGCTTTCAGGCCATGCAGGGTGGTTGCGCTaGTGCTTGCGGAGGTGGTCC +
Preference number: 4 (lower is better)
Translates to: GNLVLCQVSLFASELSGHAGWLR*CLRRWS
Trigger: GGACCACCTCCGCAAGCACCAGCGCAACCACCCTGC...ATGGCCTGAAAGCTCAGAAGCAAAAAGGGAGACTTGGCAGAGAACCAAATTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GGAAATTTGGTTCTCTGCCAAGTCTCCCTTTTTGCTTCTGAGCTTTCAGGCCATGGTCTGTGGAGGCCATaGGTCCTTTGGCTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: GNLVLCQVSLFASELSGHGLWRP*VLWLRG
Trigger: GCCCCGCAGCCAAAGGACCCATGGCCTCCACAGACC...ATGGCCTGAAAGCTCAGAAGCAAAAAGGGAGACTTGGCAGAGAACCAAATTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR TCA 90 bp GGAAATTTGGTTCTCTGCCAAGTCTCCCTTTTTGCTTCTGAGCTTTCAGGCCATTCCAGGTCCGTGGGATaGACAGGTGTGGCCACCACC +
Preference number: 4 (lower is better)
Translates to: GNLVLCQVSLFASELSGHSRSVG*TGVATT
Trigger: GGTGGTGGCCACACCTGTTCATCCCACGGACCTGGA...ATGGCCTGAAAGCTCAGAAGCAAAAAGGGAGACTTGGCAGAGAACCAAATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp GGAAATTTGGTTCTCTGCCAAGTCTCCCTTTTTGCTTCTGAGCTTTCAGGCCATGCCAGTCCTCCAGCTTaGCCCACTCCTTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: GNLVLCQVSLFASELSGHASPPA*PTPWGP
Trigger: AGGTCCCCAAGGAGTGGGGCAAGCTGGAGGACTGGC...ATGGCCTGAAAGCTCAGAAGCAAAAAGGGAGACTTGGCAGAGAACCAAATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp GTACTCATGGAGAGAGGCTGTGTCCCCTCTGAGCCCTTTATTTCCTATTCTCTATGCTGCTCCTGCAGCTaGAGCTCCCCCTCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: VLMERGCVPSEPFISYSLCCSCS*SSPSCL
Trigger: CAAGCAAGAGGGGGAGCTGCAGCTGCAGGAGCAGCA...TAGAGAATAGGAAATAAAGGGCTCAGAGGGGACACAGCCTCTCTCCATGAGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp TACCCATTTGGGCAAGAGACCAGTGGCTGCTTTAACAAAATGGGAATGGCTATGACACCCAGAGCCTGCTaGTCCTGCAGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: YPFGQETSGCFNKMGMAMTPRAC*SCSCSS
Trigger: GGAGCTGCAGCTGCAGGAGCAGCAGGCTCTGGGTGT...CATAGCCATTCCCATTTTGTTAAAGCAGCCACTGGTCTCTTGCCCAAATGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp TTTGCTTCTGAGCTTTCAGGCCATCCTGCTATCTGCACTCAGGACTGTACATTCATCTGGCTGTCCAGCTaGCCAGGCTTCCACACCCAG +
Preference number: 4 (lower is better)
Translates to: FASELSGHPAICTQDCTFIWLSS*PGFHTQ
Trigger: CTGGGTGTGGAAGCCTGGGCAGCTGGACAGCCAGAT...GAATGTACAGTCCTGAGTGCAGATAGCAGGATGGCCTGAAAGCTCAGAAGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp ATTGTTCCAGGAGAACTGGTTATCAGCTGCGGCTCTTCCCAGCTCCTACAATACGGCTGGGGAAGGAACTaGCTTGACTTTCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: IVPGELVISCGSSQLLQYGWGRN*LDFPRL
Trigger: GAGCCTGGGAAAGTCAAGGCAGTTCCTTCCCCAGCC...GTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATAACCAGTTCTCCTGGAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp TTCCAGGAGAACTGGTTATCAGCTGCGGCTCTTCCCAGCTCCTACAATACAGTAGCACTCAGGCTCACCTaGAGCTGGAAGCTCTTTCCG +
Preference number: 4 (lower is better)
Translates to: FQENWLSAAALPSSYNTVALRLT*SWKLFP
Trigger: CGGAAAGAGCTTCCAGCTGCAGGTGAGCCTGAGTGC...TACTGTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATAACCAGTTCTCCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp TACCCATTTGGGCAAGAGACCAGTGGCTGCTTTAACAAAATGGGAATGGCTATGCCACTGCAGGGTGGTTaGGCTGGTGCTTGCGGAGGT +
Preference number: 4 (lower is better)
Translates to: YPFGQETSGCFNKMGMAMPLQGG*AGACGG
Trigger: ACCTCCGCAAGCACCAGCGCAACCACCCTGCAGTGG...CATAGCCATTCCCATTTTGTTAAAGCAGCCACTGGTCTCTTGCCCAAATGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GTACTCATGGAGAGAGGCTGTGTCCCCTCTGAGCCCTTTATTTCCTATTCTCTAGTCAGGGGCAGGAACTaGTGCTCCAGAGCCTGGACT +
Preference number: 4 (lower is better)
Translates to: VLMERGCVPSEPFISYSLVRGRN*CSRAWT
Trigger: AGTCCAGGCTCTGGAGCACCAGTTCCTGCCCCTGAC...TAGAGAATAGGAAATAAAGGGCTCAGAGGGGACACAGCCTCTCTCCATGAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp TACCCATTTGGGCAAGAGACCAGTGGCTGCTTTAACAAAATGGGAATGGCTATGGCTCCAGAGTCCAACTaGCTGAGGCCCCACGGCTCT +
Preference number: 4 (lower is better)
Translates to: YPFGQETSGCFNKMGMAMAPESN*LRPHGS
Trigger: AGAGCCGTGGGGCCTCAGCCAGTTGGACTCTGGAGC...CATAGCCATTCCCATTTTGTTAAAGCAGCCACTGGTCTCTTGCCCAAATGGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GGGTGCCATGGTCTCTGCCCTCTTCAGGGAGTCATTACCCATTTGGGCAAGAGATCTTGTGGCTTGGCCTaGTGCAAACAAAGTCCCATG +
Preference number: 4 (lower is better)
Translates to: GCHGLCPLQGVITHLGKRSCGLA*CKQSPM
Trigger: CATGGGACTTTGTTTGCACCAGGCCAAGCCACAAGA...TCTCTTGCCCAAATGGGTAATGACTCCCTGAAGAGGGCAGAGACCATGGCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp ATCCAACTACCTCCTGCATGTCTAGTGATGCATAAGCACACACAGGGGCTGTCCTCCCAGGCTCCTTCCTaGACAGGGCTAGGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: IQLPPACLVMHKHTQGLSSQAPS*TGLGKN
Trigger: ATTCTTCCCTAGCCCTGTCCAGGAAGGAGCCTGGGA...GGACAGCCCCTGTGTGTGCTTATGCATCACTAGACATGCAGGAGGTAGTTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GAACTGCCTGTCTGCCTGCTTTCCAAAGTCATGGTTAATGGTGGGATGAGATGTGGCTGGGGTCCAAGATaGCCTCTCCGTTGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: ELPVCLLSKVMVNGGMRCGWGPR*PLRCLE
Trigger: CTCCAGACAACGGAGAGGCCATCTTGGACCCCAGCC...ACATCTCATCCCACCATTAACCATGACTTTGGAAAGCAGGCAGACAGGCAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp ATCCAACTACCTCCTGCATGTCTAGTGATGCATAAGCACACACAGGGGCTGTCCATCATTGAAGGGTCTTaGGGCCTGGCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: IQLPPACLVMHKHTQGLSIIEGS*GLAGVQ
Trigger: TTGGACCCCAGCCAGGCCCCAAGACCCTTCAATGAT...GGACAGCCCCTGTGTGTGCTTATGCATCACTAGACATGCAGGAGGTAGTTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GGAAATTTGGTTCTCTGCCAAGTCTCCCTTTTTGCTTCTGAGCTTTCAGGCCATTTGGCCACTGCAGGGTaGTTGCGCTGGTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: GNLVLCQVSLFASELSGHLATAG*LRWCLR
Trigger: CCGCAAGCACCAGCGCAACCACCCTGCAGTGGCCAA...ATGGCCTGAAAGCTCAGAAGCAAAAAGGGAGACTTGGCAGAGAACCAAATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GGGAGGCCCTGGCTTCCTGTGACTTCAGATCTAACACTACTACAGCTCCATATGCTCCACCACCATCACTaGGTCCCAGAACACTTAGGC +
Preference number: 4 (lower is better)
Translates to: GRPWLPVTSDLTLLQLHMLHHHH*VPEHLG
Trigger: GCCTAAGTGTTCTGGGACCCAGTGATGGTGGTGGAG...CATATGGAGCTGTAGTAGTGTTAGATCTGAAGTCACAGGAAGCCAGGGCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp GTACTCATGGAGAGAGGCTGTGTCCCCTCTGAGCCCTTTATTTCCTATTCTCTATTTTCCAGCCGCCGCTaGAGCAGCCCATATTCCTGC +
Preference number: 4 (lower is better)
Translates to: VLMERGCVPSEPFISYSLFSSRR*SSPYSC
Trigger: GCAGGAATATGGGCTGCTGCAGCGGCGGCTGGAAAA...TAGAGAATAGGAAATAAAGGGCTCAGAGGGGACACAGCCTCTCTCCATGAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp TACCCATTTGGGCAAGAGACCAGTGGCTGCTTTAACAAAATGGGAATGGCTATGTGCTGCTCCTGCAGCTaGAGCTCCCCCTCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: YPFGQETSGCFNKMGMAMCCSCS*SSPSCL
Trigger: CAAGCAAGAGGGGGAGCTGCAGCTGCAGGAGCAGCA...CATAGCCATTCCCATTTTGTTAAAGCAGCCACTGGTCTCTTGCCCAAATGGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp GTACTCATGGAGAGAGGCTGTGTCCCCTCTGAGCCCTTTATTTCCTATTCTCTAGGCTGGGGAAGGAACTaGCTTGACTTTCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: VLMERGCVPSEPFISYSLGWGRN*LDFPRL
Trigger: GAGCCTGGGAAAGTCAAGGCAGTTCCTTCCCCAGCC...TAGAGAATAGGAAATAAAGGGCTCAGAGGGGACACAGCCTCTCTCCATGAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp CTTAAGATCCTATACGGTGTTGAGTTTCACAGTTGGAATTCTACTTTAAGGTGGCCGGCCTCCGGGTGGTaGCGCCGGGTGCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LKILYGVEFHSWNSTLRWPASGW*RRVLLQ
Trigger: CTGAAGAAGCACCCGGCGGCACCACCCGGAGGCCGG...CCACCTTAAAGTAGAATTCCAACTGTGAAACTCAACACCGTATAGGATCTTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GAACTGCCTGTCTGCCTGCTTTCCAAAGTCATGGTTAATGGTGGGATGAGATGTTGGTGCTCCAGAGCCTaGACTTGGGTCCACAGGAAC +
Preference number: 4 (lower is better)
Translates to: ELPVCLLSKVMVNGGMRCWCSRA*TWVHRN
Trigger: GTTCCTGTGGACCCAAGTCCAGGCTCTGGAGCACCA...ACATCTCATCCCACCATTAACCATGACTTTGGAAAGCAGGCAGACAGGCAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp TATCAGCTGCGGCTCTTCCCAGCTCCTACAATACAGTACTCATGGAGAGAGGCTCTGCTTGCCAGGAAGTaGGTGGGATGGTGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: YQLRLFPAPTIQYSWREALLARK*VGWWLK
Trigger: TTTCAACCACCATCCCACCCACTTCCTGGCAAGCAG...AGCCTCTCTCCATGAGTACTGTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR TCA 90 bp TTCCAGGAGAACTGGTTATCAGCTGCGGCTCTTCCCAGCTCCTACAATACAGTATGGATGCTGCTGTGTTaGGCTTCAGTGTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: FQENWLSAAALPSSYNTVWMLLC*ASVSHL
Trigger: CAGATGGGACACTGAAGCTCAACACAGCAGCATCCA...TACTGTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATAACCAGTTCTCCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GTGGTCCATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACACTGGTAAGTGGGTGGGATGGTaGTTGAAAAGTTGGAATGGA +
Preference number: 4 (lower is better)
Translates to: VVHGWECPSPTDHLSNTGKWVGW*LKSWNG
Trigger: TCCATTCCAACTTTTCAACCACCATCCCACCCACTT...ACCAGTGTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCATGGACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp ATTGTTCCAGGAGAACTGGTTATCAGCTGCGGCTCTTCCCAGCTCCTACAATACCTGCTTGCCAGGAAGTaGGTGGGATGGTGGTTGAAA +
Preference number: 4 (lower is better)
Translates to: IVPGELVISCGSSQLLQYLLARK*VGWWLK
Trigger: TTTCAACCACCATCCCACCCACTTCCTGGCAAGCAG...GTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATAACCAGTTCTCCTGGAACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GTACTCATGGAGAGAGGCTGTGTCCCCTCTGAGCCCTTTATTTCCTATTCTCTATGGGATGAACAGGTGTaGCCACCACCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VLMERGCVPSEPFISYSLWDEQV*PPPPLP
Trigger: AGGAAGAGGAGGTGGTGGCCACACCTGTTCATCCCA...TAGAGAATAGGAAATAAAGGGCTCAGAGGGGACACAGCCTCTCTCCATGAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp TTTGCTTCTGAGCTTTCAGGCCATCCTGCTATCTGCACTCAGGACTGTACATTCATCATTGAAGGGTCTTaGGGCCTGGCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: FASELSGHPAICTQDCTFIIEGS*GLAGVQ
Trigger: TTGGACCCCAGCCAGGCCCCAAGACCCTTCAATGAT...GAATGTACAGTCCTGAGTGCAGATAGCAGGATGGCCTGAAAGCTCAGAAGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GAACTGCCTGTCTGCCTGCTTTCCAAAGTCATGGTTAATGGTGGGATGAGATGTCTCCACCACCATCACTaGGTCCCAGAACACTTAGGC +
Preference number: 4 (lower is better)
Translates to: ELPVCLLSKVMVNGGMRCLHHHH*VPEHLG
Trigger: GCCTAAGTGTTCTGGGACCCAGTGATGGTGGTGGAG...ACATCTCATCCCACCATTAACCATGACTTTGGAAAGCAGGCAGACAGGCAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR TCA 90 bp GGAAATTTGGTTCTCTGCCAAGTCTCCCTTTTTGCTTCTGAGCTTTCAGGCCATGTGCTATGGCAGGACTaGGCTCACCAATGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GNLVLCQVSLFASELSGHVLWQD*AHQCPS
Trigger: AGAGGGACATTGGTGAGCTCAGTCCTGCCATAGCAC...ATGGCCTGAAAGCTCAGAAGCAAAAAGGGAGACTTGGCAGAGAACCAAATTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp ATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACACTGGTAAGACACATCTGCTTCTGTGGATaGTGCTGTGTTGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: MAGSALLPLTIFLTLVRHICFCG*CCVELQ
Trigger: CTGAAGCTCAACACAGCAGCATCCACAGAAGCAGAT...GTGTCTTACCAGTGTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073124.9
CDS-3UTR GCA 90 bp AGCCCCAACATGCCTGGACAGACCTGGAACTCAACCTCCCATAGGGCTGTGTGGAACAATTTTTACATCTaGTTCTGTGGATGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SPNMPGQTWNSTSHRAVWNNFYI*FCGCCC
Trigger: ACAGCAGCATCCACAGAAGCAGATGTAAAAATTGTT...CCACACAGCCCTATGGGAGGTTGAGTTCCAGGTCTGTCCAGGCATGTTGGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073124.9
CDS-3UTR GCA 90 bp GTACTCATGGAGAGAGGCTGTGTCCCCTCTGAGCCCTTTATTTCCTATTCTCTATGTGGCTTGGCCTGGTaGAAACAAAGTCCCATGAGC +
Preference number: 4 (lower is better)
Translates to: VLMERGCVPSEPFISYSLCGLAW*KQSPMS
Trigger: GCTCATGGGACTTTGTTTGCACCAGGCCAAGCCACA...TAGAGAATAGGAAATAAAGGGCTCAGAGGGGACACAGCCTCTCTCCATGAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GGAAATTTGGTTCTCTGCCAAGTCTCCCTTTTTGCTTCTGAGCTTTCAGGCCATTGGGATGAACAGGTGTaGCCACCACCTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GNLVLCQVSLFASELSGHWDEQV*PPPPLP
Trigger: AGGAAGAGGAGGTGGTGGCCACACCTGTTCATCCCA...ATGGCCTGAAAGCTCAGAAGCAAAAAGGGAGACTTGGCAGAGAACCAAATTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR TCA 90 bp GGAAATTTGGTTCTCTGCCAAGTCTCCCTTTTTGCTTCTGAGCTTTCAGGCCATTGGATGCTGCTGTGTTaGGCTTCAGTGTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: GNLVLCQVSLFASELSGHWMLLC*ASVSHL
Trigger: CAGATGGGACACTGAAGCTCAACACAGCAGCATCCA...ATGGCCTGAAAGCTCAGAAGCAAAAAGGGAGACTTGGCAGAGAACCAAATTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp GGAAATTTGGTTCTCTGCCAAGTCTCCCTTTTTGCTTCTGAGCTTTCAGGCCATTGTGGAGATGTCTCCTaGTCCAGAGTCCAACTGGCT +
Preference number: 4 (lower is better)
Translates to: GNLVLCQVSLFASELSGHCGDVS*SRVQLA
Trigger: AGCCAGTTGGACTCTGGAGCAGGAGACATCTCCACA...ATGGCCTGAAAGCTCAGAAGCAAAAAGGGAGACTTGGCAGAGAACCAAATTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp ATCCAACTACCTCCTGCATGTCTAGTGATGCATAAGCACACACAGGGGCTGTCCAGGAAGTGGGTGGGATaGTGGTTGAAAAGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: IQLPPACLVMHKHTQGLSRKWVG*WLKSWN
Trigger: ATTCCAACTTTTCAACCACCATCCCACCCACTTCCT...GGACAGCCCCTGTGTGTGCTTATGCATCACTAGACATGCAGGAGGTAGTTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp CTTAAGATCCTATACGGTGTTGAGTTTCACAGTTGGAATTCTACTTTAAGGTGGATCTGGCTGTCCAGCTaGCCAGGCTTCCACACCCAG +
Preference number: 4 (lower is better)
Translates to: LKILYGVEFHSWNSTLRWIWLSS*PGFHTQ
Trigger: CTGGGTGTGGAAGCCTGGGCAGCTGGACAGCCAGAT...CCACCTTAAAGTAGAATTCCAACTGTGAAACTCAACACCGTATAGGATCTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR TCA 90 bp CTTAAGATCCTATACGGTGTTGAGTTTCACAGTTGGAATTCTACTTTAAGGTGGGGTGGTCCTTGCGGATaGAGCTCTTCCCACACACTG +
Preference number: 4 (lower is better)
Translates to: LKILYGVEFHSWNSTLRWGGPCG*SSSHTL
Trigger: CAGTGTGTGGGAAGAGCTTCATCCGCAAGGACCACC...CCACCTTAAAGTAGAATTCCAACTGTGAAACTCAACACCGTATAGGATCTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp CTTAAGATCCTATACGGTGTTGAGTTTCACAGTTGGAATTCTACTTTAAGGTGGCTCTTCCCCAATATCTaGCTGTCCAGCTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LKILYGVEFHSWNSTLRWLFPNI*LSSCPG
Trigger: GCCTGGGCAGCTGGACAGCCAGATATTGGGGAAGAG...CCACCTTAAAGTAGAATTCCAACTGTGAAACTCAACACCGTATAGGATCTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp TTTGCTTCTGAGCTTTCAGGCCATCCTGCTATCTGCACTCAGGACTGTACATTCAAGTGGGTGGGATGGTaGTTGAAAAGTTGGAATGGA +
Preference number: 4 (lower is better)
Translates to: FASELSGHPAICTQDCTFKWVGW*LKSWNG
Trigger: TCCATTCCAACTTTTCAACCACCATCCCACCCACTT...GAATGTACAGTCCTGAGTGCAGATAGCAGGATGGCCTGAAAGCTCAGAAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp TTCCAGGAGAACTGGTTATCAGCTGCGGCTCTTCCCAGCTCCTACAATACAGTAACCACCTCCTCTTCCTaGACTTCTGTTTTGATAACA +
Preference number: 4 (lower is better)
Translates to: FQENWLSAAALPSSYNTVTTSSS*TSVLIT
Trigger: TGTTATCAAAACAGAAGTCCAGGAAGAGGAGGTGGT...TACTGTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATAACCAGTTCTCCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp GTACTCATGGAGAGAGGCTGTGTCCCCTCTGAGCCCTTTATTTCCTATTCTCTAAGCCTGAATTGTAGCTaGCATTGTCCATGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: VLMERGCVPSEPFISYSLSLNCS*HCPWRN
Trigger: ATTTCTCCATGGACAATGGCAGCTACAATTCAGGCT...TAGAGAATAGGAAATAAAGGGCTCAGAGGGGACACAGCCTCTCTCCATGAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp GAACTGCCTGTCTGCCTGCTTTCCAAAGTCATGGTTAATGGTGGGATGAGATGTAGCCTGAATTGTAGCTaGCATTGTCCATGGAGAAAT +
Preference number: 4 (lower is better)
Translates to: ELPVCLLSKVMVNGGMRCSLNCS*HCPWRN
Trigger: ATTTCTCCATGGACAATGGCAGCTACAATTCAGGCT...ACATCTCATCCCACCATTAACCATGACTTTGGAAAGCAGGCAGACAGGCAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GTACTCATGGAGAGAGGCTGTGTCCCCTCTGAGCCCTTTATTTCCTATTCTCTAGTTGAAAAGTTGGAATaGACACCAGAGGTAGCATCT +
Preference number: 4 (lower is better)
Translates to: VLMERGCVPSEPFISYSLVEKLE*TPEVAS
Trigger: AGATGCTACCTCTGGTGTCCATTCCAACTTTTCAAC...TAGAGAATAGGAAATAAAGGGCTCAGAGGGGACACAGCCTCTCTCCATGAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp TACCCATTTGGGCAAGAGACCAGTGGCTGCTTTAACAAAATGGGAATGGCTATGAGGAAGTGGGTGGGATaGTGGTTGAAAAGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: YPFGQETSGCFNKMGMAMRKWVG*WLKSWN
Trigger: ATTCCAACTTTTCAACCACCATCCCACCCACTTCCT...CATAGCCATTCCCATTTTGTTAAAGCAGCCACTGGTCTCTTGCCCAAATGGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp GTACTCATGGAGAGAGGCTGTGTCCCCTCTGAGCCCTTTATTTCCTATTCTCTAACCACCTCCTCTTCCTaGACTTCTGTTTTGATAACA +
Preference number: 4 (lower is better)
Translates to: VLMERGCVPSEPFISYSLTTSSS*TSVLIT
Trigger: TGTTATCAAAACAGAAGTCCAGGAAGAGGAGGTGGT...TAGAGAATAGGAAATAAAGGGCTCAGAGGGGACACAGCCTCTCTCCATGAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp CTTAAGATCCTATACGGTGTTGAGTTTCACAGTTGGAATTCTACTTTAAGGTGGTCCCAGGCTCCTTCCTaGACAGGGCTAGGGAAGAAT +
Preference number: 4 (lower is better)
Translates to: LKILYGVEFHSWNSTLRWSQAPS*TGLGKN
Trigger: ATTCTTCCCTAGCCCTGTCCAGGAAGGAGCCTGGGA...CCACCTTAAAGTAGAATTCCAACTGTGAAACTCAACACCGTATAGGATCTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp CTTAAGATCCTATACGGTGTTGAGTTTCACAGTTGGAATTCTACTTTAAGGTGGCAGTCACAAGGTCTGTaGAGGCCATGGGTCCTTTGG +
Preference number: 4 (lower is better)
Translates to: LKILYGVEFHSWNSTLRWQSQGL*RPWVLW
Trigger: CCAAAGGACCCATGGCCTCCACAGACCTTGTGACTG...CCACCTTAAAGTAGAATTCCAACTGTGAAACTCAACACCGTATAGGATCTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR CAA 72 bp AACATGGAAATTTGGTTCTCTGCCAAGTCTCCCTTTTaGCTTCTGAGCTTTCAGGCCATCCTGCTATCTGCA +
Preference number: 4 (lower is better)
Translates to: NMEIWFSAKSPF*LLSFQAILLSA
Trigger: TGCAGATAGCAGGATGGCCTGAAAGCTCAGAAGCAAAAAGGGAGACTTGGCAGAGAACCAAATTTCCATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
3UTR CAA 72 bp AGGGTAAGATCTCAAAACCTTTCCTTCCCTAAACCATaGTTCCAGGAGAACTGGTTATCAGCTGCGGCTCTT +
Preference number: 4 (lower is better)
Translates to: RVRSQNLSFPKP*FQENWLSAAAL
Trigger: AAGAGCCGCAGCTGATAACCAGTTCTCCTGGAACAATGGTTTAGGGAAGGAAAGGTTTTGAGATCTTACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR GCA 90 bp CTTAAGATCCTATACGGTGTTGAGTTTCACAGTTGGAATTCTACTTTAAGGTGGTGTGGCTTGGCCTGGTaGAAACAAAGTCCCATGAGC +
Preference number: 4 (lower is better)
Translates to: LKILYGVEFHSWNSTLRWCGLAW*KQSPMS
Trigger: GCTCATGGGACTTTGTTTGCACCAGGCCAAGCCACA...CCACCTTAAAGTAGAATTCCAACTGTGAAACTCAACACCGTATAGGATCTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp TACCCATTTGGGCAAGAGACCAGTGGCTGCTTTAACAAAATGGGAATGGCTATGGTTGAAAAGTTGGAATaGACACCAGAGGTAGCATCT +
Preference number: 4 (lower is better)
Translates to: YPFGQETSGCFNKMGMAMVEKLE*TPEVAS
Trigger: AGATGCTACCTCTGGTGTCCATTCCAACTTTTCAAC...CATAGCCATTCCCATTTTGTTAAAGCAGCCACTGGTCTCTTGCCCAAATGGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CCA 90 bp CTTAAGATCCTATACGGTGTTGAGTTTCACAGTTGGAATTCTACTTTAAGGTGGCGGGTTCAGGCCCACTaGAGGTTTACACCGGAAATT +
Preference number: 4 (lower is better)
Translates to: LKILYGVEFHSWNSTLRWRVQAH*RFTPEI
Trigger: AATTTCCGGTGTAAACCTCCAGTGGGCCTGAACCCG...CCACCTTAAAGTAGAATTCCAACTGTGAAACTCAACACCGTATAGGATCTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS GCA 90 bp TCCTCCGCCGCTGCCACCACCTCCGCCTCCAGTAGTGGTGGAAGCTaGCCCCGTGGCCGCCCCATCGGACAGTCCGCAGCTGCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: SSAAATTSASSSGGS*PRGRPIGQSAAALV
Trigger: CACCAGCGCAGCTGCGGACTGTCCGATGGGGCGGCCACGGGGGCAGCTTCCACCACTACTGGAGGCGGAGGTGGTGGCAGCGGCGGAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS CCA 90 bp GCTGCCCCCGTGGCCGCCCCATCGGACAGTCCGCAGCTGCGCTGGTaGGCACTCAGGCTCACCTGCAGCTGGAAGCTCTTTCCGCAGGTG +
Preference number: 5 (lower is better)
Translates to: AAPVAAPSDSPQLRW*ALRLTCSWKLFPQV
Trigger: CACCTGCGGAAAGAGCTTCCAGCTGCAGGTGAGCCTGAGTGCCCACCAGCGCAGCTGCGGACTGTCCGATGGGGCGGCCACGGGGGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS GCA 90 bp CAGGTGGCACAGGTGAAGGGCCGGCCTCCGGGTGGTGCCGCCGGGTaGTTCTTCAGCCCCGGTTTGTGGCCGAAGCCTTTTGTCCGGCCA +
Preference number: 5 (lower is better)
Translates to: QVAQVKGRPPGGAAG*FFSPGLWPKPFVRP
Trigger: TGGCCGGACAAAAGGCTTCGGCCACAAACCGGGGCTGAAGAAGCACCCGGCGGCACCACCCGGAGGCCGGCCCTTCACCTGTGCCACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS CCA 90 bp GAAGCTGCCCCCGTGGCCGCCCCATCGGACAGTCCGCAGCTGCGCTaGTGGGCACTCAGGCTCACCTGCAGCTGGAAGCTCTTTCCGCAG +
Preference number: 5 (lower is better)
Translates to: EAAPVAAPSDSPQLR*WALRLTCSWKLFPQ
Trigger: CTGCGGAAAGAGCTTCCAGCTGCAGGTGAGCCTGAGTGCCCACCAGCGCAGCTGCGGACTGTCCGATGGGGCGGCCACGGGGGCAGCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS TCA 90 bp TCAGGCTCACCTGCAGCTGGAAGCTCTTTCCGCAGGTGGCACAGGTaGAGGGCCGGCCTCCGGGTGGTGCCGCCGGGTGCTTCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: SGSPAAGSSFRRWHR*RAGLRVVPPGASSA
Trigger: GGCTGAAGAAGCACCCGGCGGCACCACCCGGAGGCCGGCCCTTCACCTGTGCCACCTGCGGAAAGAGCTTCCAGCTGCAGGTGAGCCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS GCA 90 bp GCTCTTTCCGCAGGTGGCACAGGTGAAGGGCCGGCCTCCGGGTGGTaGCGCCGGGTGCTTCTTCAGCCCCGGTTTGTGGCCGAAGCCTTT +
Preference number: 5 (lower is better)
Translates to: ALSAGGTGEGPASGW*RRVLLQPRFVAEAF
Trigger: AAAGGCTTCGGCCACAAACCGGGGCTGAAGAAGCACCCGGCGGCACCACCCGGAGGCCGGCCCTTCACCTGTGCCACCTGCGGAAAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS CCA 90 bp CGGCCTCCGGGTGGTGCCGCCGGGTGCTTCTTCAGCCCCGGTTTGTaGCCGAAGCCTTTTGTCCGGCCAGGGTATTTGCAGGGATCATTG +
Preference number: 5 (lower is better)
Translates to: RPPGGAAGCFFSPGL*PKPFVRPGYLQGSL
Trigger: CAATGATCCCTGCAAATACCCTGGCCGGACAAAAGGCTTCGGCCACAAACCGGGGCTGAAGAAGCACCCGGCGGCACCACCCGGAGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS TCA 90 bp GGTTCAGGCCCACTGGAGGTTTACACCGGAAATTCCAGCCCCACCTaGCTCCGCCAAAGAGCCAATCCCCGGCAGGAGCCTCCTCCTGTG +
Preference number: 5 (lower is better)
Translates to: GSGPLEVYTGNSSPT*LRQRANPRQEPPPV
Trigger: CACAGGAGGAGGCTCCTGCCGGGGATTGGCTCTTTGGCGGAGTCAGGTGGGGCTGGAATTTCCGGTGTAAACCTCCAGTGGGCCTGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp GGCTGTGTGGTCCATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACAGCTTGCCCCACTCCTaGGGGACCTCGCCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: GCVVHGWECPSPTDHLSNSLPHS*GTSPLL
Trigger: CAGCAAGGGCGAGGTCCCCAAGGAGTGGGGCAAGCT...GTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCATGGACCACACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp AGCCCCAACATGCCTGGACAGACCTGGAACTCAACCTCCCATAGGGCTGTGTGGGGGAGGGAGATCTGCTaGCCAGGAAGTGGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: SPNMPGQTWNSTSHRAVWGREIC*PGSGWD
Trigger: ATCCCACCCACTTCCTGGCAAGCAGATCTCCCTCCC...CCACACAGCCCTATGGGAGGTTGAGTTCCAGGTCTGTCCAGGCATGTTGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS CCA 90 bp CCAGAGGTAGCATCTGTGGAGATGTCTCCTGCTCCAGAGTCCAACTaGCTGAGGCCCCACGGCTCTTCCCCAATATCTGGCTGTCCAGCT +
Preference number: 5 (lower is better)
Translates to: PEVASVEMSPAPESN*LRPHGSSPISGCPA
Trigger: AGCTGGACAGCCAGATATTGGGGAAGAGCCGTGGGGCCTCAGCCAGTTGGACTCTGGAGCAGGAGACATCTCCACAGATGCTACCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS CCA 90 bp GCCTTTTGTCCGGCCAGGGTATTTGCAGGGATCATTGAAGGGTCTTaGGGCCTGGCTGGGGTCCAAGATGGCCTCTCCGTTGTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: AFCPARVFAGIIEGS*GLAGVQDGLSVVWR
Trigger: TCTCCAGACAACGGAGAGGCCATCTTGGACCCCAGCCAGGCCCCAAGACCCTTCAATGATCCCTGCAAATACCCTGGCCGGACAAAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp GGCTGTGTGGTCCATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACGGGAGGGAGATCTGCTaGCCAGGAAGTGGGTGGGAT +
Preference number: 5 (lower is better)
Translates to: GCVVHGWECPSPTDHLSNGREIC*PGSGWD
Trigger: ATCCCACCCACTTCCTGGCAAGCAGATCTCCCTCCC...GTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCATGGACCACACAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS CCA 90 bp GTGTTGAGCTTCAGTGTCCCATCTGAGCATGCTGAAGAGGGGTGGTaGGGAGGGAGATCTGCTTGCCAGGAAGTGGGTGGGATGGTGGTT +
Preference number: 5 (lower is better)
Translates to: VLSFSVPSEHAEEGW*GGRSACQEVGGMVV
Trigger: AACCACCATCCCACCCACTTCCTGGCAAGCAGATCTCCCTCCCCACCACCCCTCTTCAGCATGCTCAGATGGGACACTGAAGCTCAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS CCA 90 bp GTCCGGCCAGGGTATTTGCAGGGATCATTGAAGGGTCTTGGGGCCTaGCTGGGGTCCAAGATGGCCTCTCCGTTGTCTGGAGATGAGAAA +
Preference number: 5 (lower is better)
Translates to: VRPGYLQGSLKGLGA*LGSKMASPLSGDEK
Trigger: TTTCTCATCTCCAGACAACGGAGAGGCCATCTTGGACCCCAGCCAGGCCCCAAGACCCTTCAATGATCCCTGCAAATACCCTGGCCGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS CCA 90 bp TCAGAGGTAGCATCTGTGGAGATGTCTCCTGCTCCAGAGTCCAACTaGCTGAGGCCCCACGGCTCTTCCCCAATATCTGGCTGTCCAGCT +
Preference number: 5 (lower is better)
Translates to: SEVASVEMSPAPESN*LRPHGSSPISGCPA
Trigger: AGCTGGACAGCCAGATATTGGGGAAGAGCCGTGGGGCCTCAGCCAGTTGGACTCTGGAGCAGGAGACATCTCCACAGATGCTACCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000203033.2
CDS-3UTR CAA 90 bp ATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACACTGGTAAGACACAGCTTGCCCCACTCCTaGGGGACCTCGCCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: MAGSALLPLTIFLTLVRHSLPHS*GTSPLL
Trigger: CAGCAAGGGCGAGGTCCCCAAGGAGTGGGGCAAGCT...GTGTCTTACCAGTGTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp GGCTGTGTGGTCCATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACGGGGAAGGAACTGCCTaGACTTTCCCAGGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: GCVVHGWECPSPTDHLSNGEGTA*TFPGSF
Trigger: GAAGGAGCCTGGGAAAGTCAAGGCAGTTCCTTCCCC...GTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCATGGACCACACAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp GGCTGTGTGGTCCATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACTGTGGCCGAAGCCTTTaGTCCGGCCAGGGTATTTGC +
Preference number: 5 (lower is better)
Translates to: GCVVHGWECPSPTDHLSNCGRSL*SGQGIC
Trigger: GCAAATACCCTGGCCGGACAAAAGGCTTCGGCCACA...GTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCATGGACCACACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp TTCCAGGAGAACTGGTTATCAGCTGCGGCTCTTCCCAGCTCCTACAATACAGTAGCCACTGCAGGGTGGTaGCGCTGGTGCTTGCGGAGG +
Preference number: 5 (lower is better)
Translates to: FQENWLSAAALPSSYNTVATAGW*RWCLRR
Trigger: CCTCCGCAAGCACCAGCGCAACCACCCTGCAGTGGC...TACTGTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATAACCAGTTCTCCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp GAACTGCCTGTCTGCCTGCTTTCCAAAGTCATGGTTAATGGTGGGATGAGATGTTTGGGGACCTCGCCCTaGCTGCCTGGGGGAAGCCGA +
Preference number: 5 (lower is better)
Translates to: ELPVCLLSKVMVNGGMRCLGTSP*LPGGSR
Trigger: TCGGCTTCCCCCAGGCAGCAAGGGCGAGGTCCCCAA...ACATCTCATCCCACCATTAACCATGACTTTGGAAAGCAGGCAGACAGGCAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp TTTGCTTCTGAGCTTTCAGGCCATCCTGCTATCTGCACTCAGGACTGTACATTCTTGGGGACCTCGCCCTaGCTGCCTGGGGGAAGCCGA +
Preference number: 5 (lower is better)
Translates to: FASELSGHPAICTQDCTFLGTSP*LPGGSR
Trigger: TCGGCTTCCCCCAGGCAGCAAGGGCGAGGTCCCCAA...GAATGTACAGTCCTGAGTGCAGATAGCAGGATGGCCTGAAAGCTCAGAAGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp ATGGCTGGGAGTGCCCTTCTCCCACTGACCATCTTTCTAACACTGGTAAGACACCTCCAGAGCCTGGACTaGGGTCCACAGGAACCTCCG +
Preference number: 5 (lower is better)
Translates to: MAGSALLPLTIFLTLVRHLQSLD*GPQEPP
Trigger: CGGAGGTTCCTGTGGACCCAAGTCCAGGCTCTGGAG...GTGTCTTACCAGTGTTAGAAAGATGGTCAGTGGGAGAAGGGCACTCCCAGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS GCA 90 bp AAAGTTGGAATGGACACCAGAGGTAGCATCTGTGGAGATGTCTCCTaGTCCAGAGTCCAACTGGCTGAGGCCCCACGGCTCTTCCCCAAT +
Preference number: 5 (lower is better)
Translates to: KVGMDTRGSICGDVS*SRVQLAEAPRLFPN
Trigger: ATTGGGGAAGAGCCGTGGGGCCTCAGCCAGTTGGACTCTGGAGCAGGAGACATCTCCACAGATGCTACCTCTGGTGTCCATTCCAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp GAACTGCCTGTCTGCCTGCTTTCCAAAGTCATGGTTAATGGTGGGATGAGATGTTGGTTGCGCTGGTGCTaGCGGAGGTGGTCCTTGCGG +
Preference number: 5 (lower is better)
Translates to: ELPVCLLSKVMVNGGMRCWLRWC*RRWSLR
Trigger: CCGCAAGGACCACCTCCGCAAGCACCAGCGCAACCA...ACATCTCATCCCACCATTAACCATGACTTTGGAAAGCAGGCAGACAGGCAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp ATCCAACTACCTCCTGCATGTCTAGTGATGCATAAGCACACACAGGGGCTGTCCGAGGCCATGGGTCCTTaGGCTGCGGGGCTCTTGAAA +
Preference number: 5 (lower is better)
Translates to: IQLPPACLVMHKHTQGLSEAMGP*AAGLLK
Trigger: TTTCAAGAGCCCCGCAGCCAAAGGACCCATGGCCTC...GGACAGCCCCTGTGTGTGCTTATGCATCACTAGACATGCAGGAGGTAGTTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp GGAAATTTGGTTCTCTGCCAAGTCTCCCTTTTTGCTTCTGAGCTTTCAGGCCATTGGTTGCGCTGGTGCTaGCGGAGGTGGTCCTTGCGG +
Preference number: 5 (lower is better)
Translates to: GNLVLCQVSLFASELSGHWLRWC*RRWSLR
Trigger: CCGCAAGGACCACCTCCGCAAGCACCAGCGCAACCA...ATGGCCTGAAAGCTCAGAAGCAAAAAGGGAGACTTGGCAGAGAACCAAATTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp ATCCAACTACCTCCTGCATGTCTAGTGATGCATAAGCACACACAGGGGCTGTCCCTGCAGCTCCCCCTCTaGCTTGATTTGCATCAGGAG +
Preference number: 5 (lower is better)
Translates to: IQLPPACLVMHKHTQGLSLQLPL*LDLHQE
Trigger: CTCCTGATGCAAATCAAGCAAGAGGGGGAGCTGCAG...GGACAGCCCCTGTGTGTGCTTATGCATCACTAGACATGCAGGAGGTAGTTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp TATCAGCTGCGGCTCTTCCCAGCTCCTACAATACAGTACTCATGGAGAGAGGCTCTGCAGCTCCCCCTCTaGCTTGATTTGCATCAGGAG +
Preference number: 5 (lower is better)
Translates to: YQLRLFPAPTIQYSWREALQLPL*LDLHQE
Trigger: CTCCTGATGCAAATCAAGCAAGAGGGGGAGCTGCAG...AGCCTCTCTCCATGAGTACTGTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp TTCCAGGAGAACTGGTTATCAGCTGCGGCTCTTCCCAGCTCCTACAATACAGTAGGGGAAGGAACTGCCTaGACTTTCCCAGGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: FQENWLSAAALPSSYNTVGEGTA*TFPGSF
Trigger: GAAGGAGCCTGGGAAAGTCAAGGCAGTTCCTTCCCC...TACTGTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATAACCAGTTCTCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp GGGAGGCCCTGGCTTCCTGTGACTTCAGATCTAACACTACTACAGCTCCATATGTTCTTCAGCCCCGGTTaGTGGCCGAAGCCTTTTGTC +
Preference number: 5 (lower is better)
Translates to: GRPWLPVTSDLTLLQLHMFFSPG*WPKPFV
Trigger: GACAAAAGGCTTCGGCCACAAACCGGGGCTGAAGAA...CATATGGAGCTGTAGTAGTGTTAGATCTGAAGTCACAGGAAGCCAGGGCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp ATCCAACTACCTCCTGCATGTCTAGTGATGCATAAGCACACACAGGGGCTGTCCAAGATGGCCTCTCCGTaGTCTGGAGATGAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: IQLPPACLVMHKHTQGLSKMASP*SGDEKG
Trigger: CCCTTTCTCATCTCCAGACAACGGAGAGGCCATCTT...GGACAGCCCCTGTGTGTGCTTATGCATCACTAGACATGCAGGAGGTAGTTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp TACCCATTTGGGCAAGAGACCAGTGGCTGCTTTAACAAAATGGGAATGGCTATGGAGGCCATGGGTCCTTaGGCTGCGGGGCTCTTGAAA +
Preference number: 5 (lower is better)
Translates to: YPFGQETSGCFNKMGMAMEAMGP*AAGLLK
Trigger: TTTCAAGAGCCCCGCAGCCAAAGGACCCATGGCCTC...CATAGCCATTCCCATTTTGTTAAAGCAGCCACTGGTCTCTTGCCCAAATGGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp TTCCAGGAGAACTGGTTATCAGCTGCGGCTCTTCCCAGCTCCTACAATACAGTAGTGGATGCTGCTGTGTaGAGCTTCAGTGTCCCATCT +
Preference number: 5 (lower is better)
Translates to: FQENWLSAAALPSSYNTVVDAAV*SFSVPS
Trigger: AGATGGGACACTGAAGCTCAACACAGCAGCATCCAC...TACTGTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATAACCAGTTCTCCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp GTACTCATGGAGAGAGGCTGTGTCCCCTCTGAGCCCTTTATTTCCTATTCTCTAGTCCGGCCAGGGTATTaGCAGGGATCATTGAAGGGT +
Preference number: 5 (lower is better)
Translates to: VLMERGCVPSEPFISYSLVRPGY*QGSLKG
Trigger: ACCCTTCAATGATCCCTGCAAATACCCTGGCCGGAC...TAGAGAATAGGAAATAAAGGGCTCAGAGGGGACACAGCCTCTCTCCATGAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp GAACTGCCTGTCTGCCTGCTTTCCAAAGTCATGGTTAATGGTGGGATGAGATGTGTCCGGCCAGGGTATTaGCAGGGATCATTGAAGGGT +
Preference number: 5 (lower is better)
Translates to: ELPVCLLSKVMVNGGMRCVRPGY*QGSLKG
Trigger: ACCCTTCAATGATCCCTGCAAATACCCTGGCCGGAC...ACATCTCATCCCACCATTAACCATGACTTTGGAAAGCAGGCAGACAGGCAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp ATCCAACTACCTCCTGCATGTCTAGTGATGCATAAGCACACACAGGGGCTGTCCGAAGAATCTTGTGGCTaGGCCTGGTGCAAACAAAGT +
Preference number: 5 (lower is better)
Translates to: IQLPPACLVMHKHTQGLSEESCG*AWCKQS
Trigger: ACTTTGTTTGCACCAGGCCAAGCCACAAGATTCTTC...GGACAGCCCCTGTGTGTGCTTATGCATCACTAGACATGCAGGAGGTAGTTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp TTTGCTTCTGAGCTTTCAGGCCATCCTGCTATCTGCACTCAGGACTGTACATTCAAGATGGCCTCTCCGTaGTCTGGAGATGAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: FASELSGHPAICTQDCTFKMASP*SGDEKG
Trigger: CCCTTTCTCATCTCCAGACAACGGAGAGGCCATCTT...GAATGTACAGTCCTGAGTGCAGATAGCAGGATGGCCTGAAAGCTCAGAAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp TACCCATTTGGGCAAGAGACCAGTGGCTGCTTTAACAAAATGGGAATGGCTATGTTCTTCAGCCCCGGTTaGTGGCCGAAGCCTTTTGTC +
Preference number: 5 (lower is better)
Translates to: YPFGQETSGCFNKMGMAMFFSPG*WPKPFV
Trigger: GACAAAAGGCTTCGGCCACAAACCGGGGCTGAAGAA...CATAGCCATTCCCATTTTGTTAAAGCAGCCACTGGTCTCTTGCCCAAATGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp GGAAATTTGGTTCTCTGCCAAGTCTCCCTTTTTGCTTCTGAGCTTTCAGGCCATAGCTCCCCCTCTTGCTaGATTTGCATCAGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: GNLVLCQVSLFASELSGHSSPSC*ICIRRS
Trigger: TGACCTCCTGATGCAAATCAAGCAAGAGGGGGAGCT...ATGGCCTGAAAGCTCAGAAGCAAAAAGGGAGACTTGGCAGAGAACCAAATTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp GGGAGGCCCTGGCTTCCTGTGACTTCAGATCTAACACTACTACAGCTCCATATGATGGTGGTTGAAAAGTaGGAATGGACACCAGAGGTA +
Preference number: 5 (lower is better)
Translates to: GRPWLPVTSDLTLLQLHMMVVEK*EWTPEV
Trigger: TACCTCTGGTGTCCATTCCAACTTTTCAACCACCAT...CATATGGAGCTGTAGTAGTGTTAGATCTGAAGTCACAGGAAGCCAGGGCCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp TTCCAGGAGAACTGGTTATCAGCTGCGGCTCTTCCCAGCTCCTACAATACAGTAGAAGAATCTTGTGGCTaGGCCTGGTGCAAACAAAGT +
Preference number: 5 (lower is better)
Translates to: FQENWLSAAALPSSYNTVEESCG*AWCKQS
Trigger: ACTTTGTTTGCACCAGGCCAAGCCACAAGATTCTTC...TACTGTATTGTAGGAGCTGGGAAGAGCCGCAGCTGATAACCAGTTCTCCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp CTTAAGATCCTATACGGTGTTGAGTTTCACAGTTGGAATTCTACTTTAAGGTGGAGCTCCCCCTCTTGCTaGATTTGCATCAGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: LKILYGVEFHSWNSTLRWSSPSC*ICIRRS
Trigger: TGACCTCCTGATGCAAATCAAGCAAGAGGGGGAGCT...CCACCTTAAAGTAGAATTCCAACTGTGAAACTCAACACCGTATAGGATCTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp CTTAAGATCCTATACGGTGTTGAGTTTCACAGTTGGAATTCTACTTTAAGGTGGGTGGATGCTGCTGTGTaGAGCTTCAGTGTCCCATCT +
Preference number: 5 (lower is better)
Translates to: LKILYGVEFHSWNSTLRWVDAAV*SFSVPS
Trigger: AGATGGGACACTGAAGCTCAACACAGCAGCATCCAC...CCACCTTAAAGTAGAATTCCAACTGTGAAACTCAACACCGTATAGGATCTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS-3UTR CAA 90 bp CTTAAGATCCTATACGGTGTTGAGTTTCACAGTTGGAATTCTACTTTAAGGTGGATGGTGGTTGAAAAGTaGGAATGGACACCAGAGGTA +
Preference number: 5 (lower is better)
Translates to: LKILYGVEFHSWNSTLRWMVVEK*EWTPEV
Trigger: TACCTCTGGTGTCCATTCCAACTTTTCAACCACCAT...CCACCTTAAAGTAGAATTCCAACTGTGAAACTCAACACCGTATAGGATCTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS GCA 72 bp GCAGGTGGCACAGGTGAAGGGCCGGCCTCCGGGTGGTaGCGCCGGGTGCTTCTTCAGCCCCGGTTTGTGGCC +
Preference number: 6 (lower is better)
Translates to: AGGTGEGPASGW*RRVLLQPRFVA
Trigger: GGCCACAAACCGGGGCTGAAGAAGCACCCGGCGGCACCACCCGGAGGCCGGCCCTTCACCTGTGCCACCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS GCA 72 bp CTGCCCCCGTGGCCGCCCCATCGGACAGTCCGCAGCTaGGCTGGTGGGCACTCAGGCTCACCTGCAGCTGGA +
Preference number: 6 (lower is better)
Translates to: LPPWPPHRTVRS*AGGHSGSPAAG
Trigger: TCCAGCTGCAGGTGAGCCTGAGTGCCCACCAGCGCAGCTGCGGACTGTCCGATGGGGCGGCCACGGGGGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS GCA 72 bp GGGAGGAGCCGGCAGTGGTGGGAGTGGCTGACCGTGTaGGGGCGCCTTGGCCACTGCAGGGTGGTTGCGCTG +
Preference number: 6 (lower is better)
Translates to: GRSRQWWEWLTV*GRLGHCRVVAL
Trigger: CAGCGCAACCACCCTGCAGTGGCCAAGGCGCCCGCACACGGTCAGCCACTCCCACCACTGCCGGCTCCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS TCA 72 bp CCTGCAGCTGGAAGCTCTTTCCGCAGGTGGCACAGGTaGAGGGCCGGCCTCCGGGTGGTGCCGCCGGGTGCT +
Preference number: 6 (lower is better)
Translates to: PAAGSSFRRWHR*RAGLRVVPPGA
Trigger: AGCACCCGGCGGCACCACCCGGAGGCCGGCCCTTCACCTGTGCCACCTGCGGAAAGAGCTTCCAGCTGCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS GCA 72 bp GCTGCCACCACCTCCGCCTCCAGTAGTGGTGGAAGCTaGCCCCGTGGCCGCCCCATCGGACAGTCCGCAGCT +
Preference number: 6 (lower is better)
Translates to: AATTSASSSGGS*PRGRPIGQSAA
Trigger: AGCTGCGGACTGTCCGATGGGGCGGCCACGGGGGCAGCTTCCACCACTACTGGAGGCGGAGGTGGTGGCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS CCA 72 bp CCCGTGGCCGCCCCATCGGACAGTCCGCAGCTGCGCTaGTGGGCACTCAGGCTCACCTGCAGCTGGAAGCTC +
Preference number: 6 (lower is better)
Translates to: PVAAPSDSPQLR*WALRLTCSWKL
Trigger: GAGCTTCCAGCTGCAGGTGAGCCTGAGTGCCCACCAGCGCAGCTGCGGACTGTCCGATGGGGCGGCCACGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS GCA 72 bp CAGGTGAAGGGCCGGCCTCCGGGTGGTGCCGCCGGGTaGTTCTTCAGCCCCGGTTTGTGGCCGAAGCCTTTT +
Preference number: 6 (lower is better)
Translates to: QVKGRPPGGAAG*FFSPGLWPKPF
Trigger: AAAAGGCTTCGGCCACAAACCGGGGCTGAAGAAGCACCCGGCGGCACCACCCGGAGGCCGGCCCTTCACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS GCA 72 bp ACCACACTCCCCACACCTCAGAGCGCTGCTGTCCCGTaGACTGCTCCCACCTCCGCTGCTGCCTCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: TTLPTPQSAAVP*TAPTSAAASSS
Trigger: GGAGGAGGAGGCAGCAGCGGAGGTGGGAGCAGTGCACGGGACAGCAGCGCTCTGAGGTGTGGGGAGTGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS CAA 90 bp GGCCGGCCTCCGGGTGGTGCCGCCGGGTGCTTCTTCAGCCCCGGTTaGTGGCCGAAGCCTTTTGTCCGGCCAGGGTATTTGCAGGGATCA +
Preference number: 6 (lower is better)
Translates to: GRPPGGAAGCFFSPG*WPKPFVRPGYLQGS
Trigger: TGATCCCTGCAAATACCCTGGCCGGACAAAAGGCTTCGGCCACAAACCGGGGCTGAAGAAGCACCCGGCGGCACCACCCGGAGGCCGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS GCA 72 bp AGTCCGCAGCTGCGCTGGTGGGCACTCAGGCTCACCTaGAGCTGGAAGCTCTTTCCGCAGGTGGCACAGGTG +
Preference number: 6 (lower is better)
Translates to: SPQLRWWALRLT*SWKLFPQVAQV
Trigger: CACCTGTGCCACCTGCGGAAAGAGCTTCCAGCTGCAGGTGAGCCTGAGTGCCCACCAGCGCAGCTGCGGACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS CCA 72 bp GAGCCCCTCGGGCACCGTCCTCGGGTTCAGGCCCACTaGAGGTTTACACCGGAAATTCCAGCCCCACCTGAC +
Preference number: 6 (lower is better)
Translates to: EPLGHRPRVQAH*RFTPEIPAPPD
Trigger: GTCAGGTGGGGCTGGAATTTCCGGTGTAAACCTCCAGTGGGCCTGAACCCGAGGACGGTGCCCGAGGGGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS CAA 72 bp CCGGGTGGTGCCGCCGGGTGCTTCTTCAGCCCCGGTTaGTGGCCGAAGCCTTTTGTCCGGCCAGGGTATTTG +
Preference number: 6 (lower is better)
Translates to: PGGAAGCFFSPG*WPKPFVRPGYL
Trigger: CAAATACCCTGGCCGGACAAAAGGCTTCGGCCACAAACCGGGGCTGAAGAAGCACCCGGCGGCACCACCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS TCA 72 bp GCTGGGGTCCAAGATGGCCTCTCCGTTGTCTGGAGATaGGAAAGGGAGCCCCTCGGGCACCGTCCTCGGGTT +
Preference number: 6 (lower is better)
Translates to: AGVQDGLSVVWR*EREPLGHRPRV
Trigger: AACCCGAGGACGGTGCCCGAGGGGCTCCCTTTCTCATCTCCAGACAACGGAGAGGCCATCTTGGACCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS CCA 72 bp CAACTGGCTGAGGCCCCACGGCTCTTCCCCAATATCTaGCTGTCCAGCTGCCCAGGCTTCCACACCCAGAGC +
Preference number: 6 (lower is better)
Translates to: QLAEAPRLFPNI*LSSCPGFHTQS
Trigger: GCTCTGGGTGTGGAAGCCTGGGCAGCTGGACAGCCAGATATTGGGGAAGAGCCGTGGGGCCTCAGCCAGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000073124.9
ENSMUST00000203033.2
ENSMUST00000203609.3
CDS CCA 72 bp GGTGGTGCCGCCGGGTGCTTCTTCAGCCCCGGTTTGTaGCCGAAGCCTTTTGTCCGGCCAGGGTATTTGCAG +
Preference number: 6 (lower is better)
Translates to: GGAAGCFFSPGL*PKPFVRPGYLQ
Trigger: CTGCAAATACCCTGGCCGGACAAAAGGCTTCGGCCACAAACCGGGGCTGAAGAAGCACCCGGCGGCACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS CAA 90 bp CCACAAGTCCAGTCAGTCACAAGGTCTGTGGAGGCCATGGGTCCTTaGGCTGCGGGGCTCTTGAAAGGGTCGGGAGGAGCCGGCAGTGGT +
Preference number: 6 (lower is better)
Translates to: PQVQSVTRSVEAMGP*AAGLLKGSGGAGSG
Trigger: ACCACTGCCGGCTCCTCCCGACCCTTTCAAGAGCCCCGCAGCCAAAGGACCCATGGCCTCCACAGACCTTGTGACTGACTGGACTTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS CAA 72 bp CAGTCAGTCACAAGGTCTGTGGAGGCCATGGGTCCTTaGGCTGCGGGGCTCTTGAAAGGGTCGGGAGGAGCC +
Preference number: 6 (lower is better)
Translates to: QSVTRSVEAMGP*AAGLLKGSGGA
Trigger: GGCTCCTCCCGACCCTTTCAAGAGCCCCGCAGCCAAAGGACCCATGGCCTCCACAGACCTTGTGACTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS TCA 72 bp CCACTGGAGGTTTACACCGGAAATTCCAGCCCCACCTaGCTCCGCCAAAGAGCCAATCCCCGGCAGGAGCCT +
Preference number: 6 (lower is better)
Translates to: PLEVYTGNSSPT*LRQRANPRQEP
Trigger: AGGCTCCTGCCGGGGATTGGCTCTTTGGCGGAGTCAGGTGGGGCTGGAATTTCCGGTGTAAACCTCCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS GCA 72 bp GCCAAAGAGCCAATCCCCGGCAGGAGCCTCCTCCTGTaGTATGGCAGGACTGAGCTCACCAATGTCCCTCTC +
Preference number: 6 (lower is better)
Translates to: AKEPIPGRSLLL*YGRTELTNVPL
Trigger: GAGAGGGACATTGGTGAGCTCAGTCCTGCCATAGCACAGGAGGAGGCTCCTGCCGGGGATTGGCTCTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS TCA 72 bp CTGTGGAGATGTCTCCTGCTCCAGAGTCCAACTGGCTaGGGCCCCACGGCTCTTCCCCAATATCTGGCTGTC +
Preference number: 6 (lower is better)
Translates to: LWRCLLLQSPTG*GPTALPQYLAV
Trigger: GACAGCCAGATATTGGGGAAGAGCCGTGGGGCCTCAGCCAGTTGGACTCTGGAGCAGGAGACATCTCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000073124.9
ENSMUST00000203033.2
ENSMUST00000203609.3
CDS GCA 72 bp ATGGACACCAGAGGTAGCATCTGTGGAGATGTCTCCTaGTCCAGAGTCCAACTGGCTGAGGCCCCACGGCTC +
Preference number: 6 (lower is better)
Translates to: MDTRGSICGDVS*SRVQLAEAPRL
Trigger: GAGCCGTGGGGCCTCAGCCAGTTGGACTCTGGAGCAGGAGACATCTCCACAGATGCTACCTCTGGTGTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS CCA 72 bp TTCAGTGTCCCATCTGAGCATGCTGAAGAGGGGTGGTaGGGAGGGAGATCTGCTTGCCAGGAAGTGGGTGGG +
Preference number: 6 (lower is better)
Translates to: FSVPSEHAEEGW*GGRSACQEVGG
Trigger: CCCACCCACTTCCTGGCAAGCAGATCTCCCTCCCCACCACCCCTCTTCAGCATGCTCAGATGGGACACTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS GCA 72 bp CTTGATTTGCATCAGGAGGTCAGGGGCAGGAACTGGTaGTCCAGAGCCTGGACTTGGGTCCACAGGAACCTC +
Preference number: 6 (lower is better)
Translates to: LDLHQEVRGRNW*SRAWTWVHRNL
Trigger: GAGGTTCCTGTGGACCCAAGTCCAGGCTCTGGAGCACCAGTTCCTGCCCCTGACCTCCTGATGCAAATCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS GCA 72 bp GACAGGGCTAGGGAAGAATCTTGTGGCTTGGCCTGGTaGAAACAAAGTCCCATGAGCCTCCAGGTCCGTGGG +
Preference number: 6 (lower is better)
Translates to: DRAREESCGLAW*KQSPMSLQVRG
Trigger: CCCACGGACCTGGAGGCTCATGGGACTTTGTTTGCACCAGGCCAAGCCACAAGATTCTTCCCTAGCCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000073124.9
ENSMUST00000203033.2
ENSMUST00000203609.3
CDS CCA 72 bp GGGTATTTGCAGGGATCATTGAAGGGTCTTGGGGCCTaGCTGGGGTCCAAGATGGCCTCTCCGTTGTCTGGA +
Preference number: 6 (lower is better)
Translates to: GYLQGSLKGLGA*LGSKMASPLSG
Trigger: TCCAGACAACGGAGAGGCCATCTTGGACCCCAGCCAGGCCCCAAGACCCTTCAATGATCCCTGCAAATACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS CAA 72 bp GGTTTGTGGCCGAAGCCTTTTGTCCGGCCAGGGTATTaGCAGGGATCATTGAAGGGTCTTGGGGCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: GLWPKPFVRPGY*QGSLKGLGAWL
Trigger: CAGCCAGGCCCCAAGACCCTTCAATGATCCCTGCAAATACCCTGGCCGGACAAAAGGCTTCGGCCACAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000073124.9
ENSMUST00000203609.3
CDS GCA 72 bp TTTTACATCAGAGGTAGCATCTGTGGAGATGTCTCCTaGTCCAGAGTCCAACTGGCTGAGGCCCCACGGCTC +
Preference number: 6 (lower is better)
Translates to: FYIRGSICGDVS*SRVQLAEAPRL
Trigger: GAGCCGTGGGGCCTCAGCCAGTTGGACTCTGGAGCAGGAGACATCTCCACAGATGCTACCTCTGATGTAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000203033.2
CDS CAA 72 bp ACAATTTTTACATCTGCTTCTGTGGATGCTGCTGTGTaGAGCTTCAGTGTCCCATCTGAGCATGCTGAAGAG +
Preference number: 6 (lower is better)
Translates to: TIFTSASVDAAV*SFSVPSEHAEE
Trigger: CTCTTCAGCATGCTCAGATGGGACACTGAAGCTCAACACAGCAGCATCCACAGAAGCAGATGTAAAAATTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073124.9
CDS CAA 72 bp ATAACAATTTTTACATCTTCTGTGGATGCTGCTGTGTaGAGCTTCAGTGTCCCATCTGAGCATGCTGAAGAG +
Preference number: 6 (lower is better)
Translates to: ITIFTSSVDAAV*SFSVPSEHAEE
Trigger: CTCTTCAGCATGCTCAGATGGGACACTGAAGCTCAACACAGCAGCATCCACAGAAGATGTAAAAATTGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000203609.3