Pregenerated sensors for ZFP740 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046897Ensembl transcript IDs: ENSMUST00000118729.8, ENSMUST00000119168.8, ENSMUST00000119800.8, ENSMUST00000133986.2, ENSMUST00000139960.8, ENSMUST00000141465.9, ENSMUST00000229886.2, ENSMUST00000230867.2
Found 247 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTGTCAGGGACGGATGGGAAGGGCAGGCACCAGCAAGGGTGGGATaGGACGGCCTGGTGCAGGAGTCCATCCAAGGACCGGTATTACTC | + |
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Preference number: 1 (lower is better) Translates to: AVRDGWEGQAPARVG*DGLVQESIQGPVLL Trigger: GAGTAATACCGGTCCTTGGATGGACTCCTGCACCAGGCCGTCCCATCCCACCCTTGCTGGTGCCTGCCCTTCCCATCCGTCCCTGACAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR GCA 90 bp | CAGGTTCAGAGGGAGTGGTGGTGGGACCGTCAGAACACAGGGCTATaGTCTTCCAGAGACTCTCCTCAGCACTCCCACCACCTAGGGCCC | + |
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Preference number: 1 (lower is better) Translates to: QVQREWWWDRQNTGL*SSRDSPQHSHHLGP Trigger: GGGCCCTAGGTGGTGGGAGTGCTGAGGAGAGTCTCTGGAAGAGCATAGCCCTGTGTTCTGACGGTCCCACCACCACTCCCTCTGAACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118729.8 ENSMUST00000119800.8 |
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| 3UTR TCA 90 bp | CCGAGGGACTGTGGTGACAGACATGGCCAGGCCAGCCACAGTCCTTaGTGTGCTTCAGGACTGTCCCCTCCACATTACCTGTATCCCCGG | + |
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Preference number: 1 (lower is better) Translates to: PRDCGDRHGQASHSP*CASGLSPPHYLYPR Trigger: CCGGGGATACAGGTAATGTGGAGGGGACAGTCCTGAAGCACATCAAGGACTGTGGCTGGCCTGGCCATGTCTGTCACCACAGTCCCTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR TCA 90 bp | GCCAAATGGGCTACGGAACCCAAGTCCTCCACAAGGCACTTGAGCTaGTCCCATCAGGCCCCAGTGCCACACAAACCATGGGAACACCCG | + |
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Preference number: 1 (lower is better) Translates to: AKWATEPKSSTRHLS*SHQAPVPHKPWEHP Trigger: CGGGTGTTCCCATGGTTTGTGTGGCACTGGGGCCTGATGGGATCAGCTCAAGTGCCTTGTGGAGGACTTGGGTTCCGTAGCCCATTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR GCA 90 bp | CTGTTGTATTACTCTCCACCCCAGAGCCTGTCTGTCCTTACCCACTaGCAGCTTCTGAGCCTCTCACACCTGGCCTTGGCAGTGTGGTTC | + |
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Preference number: 1 (lower is better) Translates to: LLYYSPPQSLSVLTH*QLLSLSHLALAVWF Trigger: GAACCACACTGCCAAGGCCAGGTGTGAGAGGCTCAGAAGCTGGCAGTGGGTAAGGACAGACAGGCTCTGGGGTGGAGAGTAATACAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR CCA 90 bp | TGTTCTCAGCAAGAACAAGGGAGGCAGACGTCCTTCAGGTCTGGGTaGGAAGGCTGCCCTACGTTTTTCTGTCCTCCAAGTTGGTGGCCG | + |
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Preference number: 1 (lower is better) Translates to: CSQQEQGRQTSFRSG*EGCPTFFCPPSWWP Trigger: CGGCCACCAACTTGGAGGACAGAAAAACGTAGGGCAGCCTTCCCACCCAGACCTGAAGGACGTCTGCCTCCCTTGTTCTTGCTGAGAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR CCA 90 bp | CCCCTGTTCTCAGCAAGAACAAGGGAGGCAGACGTCCTTCAGGTCTaGGTGGGAAGGCTGCCCTACGTTTTTCTGTCCTCCAAGTTGGTG | + |
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Preference number: 1 (lower is better) Translates to: PLFSARTREADVLQV*VGRLPYVFLSSKLV Trigger: CACCAACTTGGAGGACAGAAAAACGTAGGGCAGCCTTCCCACCCAGACCTGAAGGACGTCTGCCTCCCTTGTTCTTGCTGAGAACAGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR CCA 90 bp | ACCCACTGCCAGCTTCTGAGCCTCTCACACCTGGCCTTGGCAGTGTaGTTCTGGGTGGGCTGTCTGTACACATCCAGTTCTCTCTCACTT | + |
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Preference number: 1 (lower is better) Translates to: THCQLLSLSHLALAV*FWVGCLYTSSSLSL Trigger: AAGTGAGAGAGAACTGGATGTGTACAGACAGCCCACCCAGAACCACACTGCCAAGGCCAGGTGTGAGAGGCTCAGAAGCTGGCAGTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR CCA 90 bp | CAGGAGCCTTTGCAGCTGTCTGTGCATTCCCCCAGGGTAGAGATGTaGCTTCTGCCCAGGCTCTTGGCTGTTGTATTACTCTCCACCCCA | + |
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Preference number: 1 (lower is better) Translates to: QEPLQLSVHSPRVEM*LLPRLLAVVLLSTP Trigger: TGGGGTGGAGAGTAATACAACAGCCAAGAGCCTGGGCAGAAGCCACATCTCTACCCTGGGGGAATGCACAGACAGCTGCAAAGGCTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR TCA 90 bp | ATTTGCTTTCAAATAGGCGGGCTGTGGAACACCGAGGGACTGTGGTaGCAGACATGGCCAGGCCAGCCACAGTCCTTGATGTGCTTCAGG | + |
|
Preference number: 1 (lower is better) Translates to: ICFQIGGLWNTEGLW*QTWPGQPQSLMCFR Trigger: CCTGAAGCACATCAAGGACTGTGGCTGGCCTGGCCATGTCTGTCACCACAGTCCCTCGGTGTTCCACAGCCCGCCTATTTGAAAGCAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR TCA 90 bp | AAAGAGCCAAATGGGCTACGGAACCCAAGTCCTCCACAAGGCACTTaGGCTGATCCCATCAGGCCCCAGTGCCACACAAACCATGGGAAC | + |
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Preference number: 1 (lower is better) Translates to: KEPNGLRNPSPPQGT*ADPIRPQCHTNHGN Trigger: GTTCCCATGGTTTGTGTGGCACTGGGGCCTGATGGGATCAGCTCAAGTGCCTTGTGGAGGACTTGGGTTCCGTAGCCCATTTGGCTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR GCA 90 bp | CTCTCTCACTTCTCTCAGCTCCCACCTAGGCAGAACGCCACTGTCTaGAGGGCCTGCTCTGACCCAGGAAACACATTCATACTTGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: LSHFSQLPPRQNATV*RACSDPGNTFILAE Trigger: CTCTGCAAGTATGAATGTGTTTCCTGGGTCAGAGCAGGCCCTGCAGACAGTGGCGTTCTGCCTAGGTGGGAGCTGAGAGAAGTGAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR CCA 90 bp | GCAGGTGTCCCTGGGATACTCATAGCCTCAGACTGGTTACAGAGTTaGGGCTTTGGAGCCGATGTCCTCAGACGCTCTTCTGCTAACCTG | + |
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Preference number: 1 (lower is better) Translates to: AGVPGILIASDWLQS*GFGADVLRRSSANL Trigger: CAGGTTAGCAGAAGAGCGTCTGAGGACATCGGCTCCAAAGCCCCAACTCTGTAACCAGTCTGAGGCTATGAGTATCCCAGGGACACCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR CCA 90 bp | GGTTCAAGGACCAGCTCCCTTGCCCAAGAATGCTGCAGGTGTCCCTaGGATACTCATAGCCTCAGACTGGTTACAGAGTTGGGGCTTTGG | + |
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Preference number: 1 (lower is better) Translates to: GSRTSSLAQECCRCP*DTHSLRLVTELGLW Trigger: CCAAAGCCCCAACTCTGTAACCAGTCTGAGGCTATGAGTATCCCAGGGACACCTGCAGCATTCTTGGGCAAGGGAGCTGGTCCTTGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR GCA 90 bp | CAAGAACAAGGGAGGCAGACGTCCTTCAGGTCTGGGTGGGAAGGCTaGCCTACGTTTTTCTGTCCTCCAAGTTGGTGGCCGAATGAATTT | + |
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Preference number: 1 (lower is better) Translates to: QEQGRQTSFRSGWEG*PTFFCPPSWWPNEF Trigger: AAATTCATTCGGCCACCAACTTGGAGGACAGAAAAACGTAGGGCAGCCTTCCCACCCAGACCTGAAGGACGTCTGCCTCCCTTGTTCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR GCA 90 bp | CTGACCCAGGAAACACATTCATACTTGCAGAGGCACAGGCCACTCTaGCAACTTTCAGCACGAACAGATCATCTACGAGTGGCAGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: LTQETHSYLQRHRPL*QLSARTDHLRVAGR Trigger: CCTCCCTGCCACTCGTAGATGATCTGTTCGTGCTGAAAGTTGGCAGAGTGGCCTGTGCCTCTGCAAGTATGAATGTGTTTCCTGGGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR CCA 90 bp | AGGACAGCATACTCTGATACCCACAACCCCCTGCTCAACTGTGCCTaGGTTCTAGAGTCAAGGACAAGCGAGGTAGCCACAAACCACAAC | + |
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Preference number: 1 (lower is better) Translates to: RTAYSDTHNPLLNCA*VLESRTSEVATNHN Trigger: GTTGTGGTTTGTGGCTACCTCGCTTGTCCTTGACTCTAGAACCCAGGCACAGTTGAGCAGGGGGTTGTGGGTATCAGAGTATGCTGTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR TCA 90 bp | GCCACACAAACCATGGGAACACCCGTGACACAACACCGCTCTTCTTaGGGAGATAAGAAAAGGTATGCCTACGCTTCTTGTCCAGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: ATQTMGTPVTQHRSS*GDKKRYAYASCPAH Trigger: GTGGGCTGGACAAGAAGCGTAGGCATACCTTTTCTTATCTCCTCAAGAAGAGCGGTGTTGTGTCACGGGTGTTCCCATGGTTTGTGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR TCA 90 bp | CCAAGGACCGGTATTACTCTCCCTACCAAACCCACATCCACATTCTaGTGTCTGAGCACCCACCTTCTCATTTCCCCTTCTACACACACC | + |
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Preference number: 1 (lower is better) Translates to: PRTGITLPTKPTSTF*CLSTHLLISPSTHT Trigger: GGTGTGTGTAGAAGGGGAAATGAGAAGGTGGGTGCTCAGACATCAGAATGTGGATGTGGGTTTGGTAGGGAGAGTAATACCGGTCCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR TCA 90 bp | CCGGTATTACTCTCCCTACCAAACCCACATCCACATTCTGATGTCTaGGCACCCACCTTCTCATTTCCCCTTCTACACACACCTGAGACA | + |
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Preference number: 1 (lower is better) Translates to: PVLLSLPNPHPHSDV*APTFSFPLLHTPET Trigger: TGTCTCAGGTGTGTGTAGAAGGGGAAATGAGAAGGTGGGTGCTCAGACATCAGAATGTGGATGTGGGTTTGGTAGGGAGAGTAATACCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR GCA 90 bp | CTCCTTTTGTCTTCACAGTGTATAAGAAGTCCAAGGAAGCCCAGCTaGCAGCCCCCTTCCTATTTGCTTTCAAATAGGCGGGCTGTGGAA | + |
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Preference number: 1 (lower is better) Translates to: LLLSSQCIRSPRKPS*QPPSYLLSNRRAVE Trigger: TTCCACAGCCCGCCTATTTGAAAGCAAATAGGAAGGGGGCTGGCAGCTGGGCTTCCTTGGACTTCTTATACACTGTGAAGACAAAAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR GCA 90 bp | TACACTGGAAGAGGTCTTAAGGTAGGTTGCTGCCTGGCTCTCATTTaGAAGTCAAAACTTCTTCCTGGAGGCGGCCAGCTCAGATTCCTA | + |
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Preference number: 1 (lower is better) Translates to: YTGRGLKVGCCLALI*KSKLLPGGGQLRFL Trigger: TAGGAATCTGAGCTGGCCGCCTCCAGGAAGAAGTTTTGACTTGCAAATGAGAGCCAGGCAGCAACCTACCTTAAGACCTCTTCCAGTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR CCA 90 bp | AAAACTTCTTCCTGGAGGCGGCCAGCTCAGATTCCTACCCACAGCTaGAGTTGTGTGCTCAGGTGTAACCCAAAGATTACACCTGAAGTA | + |
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Preference number: 1 (lower is better) Translates to: KTSSWRRPAQIPTHS*SCVLRCNPKITPEV Trigger: TACTTCAGGTGTAATCTTTGGGTTACACCTGAGCACACAACTCCAGCTGTGGGTAGGAATCTGAGCTGGCCGCCTCCAGGAAGAAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR TCA 90 bp | TTGGACTATCCTTGTTCTAAGAGGACACAAAAGGACAGCATACTCTaGTACCCACAACCCCCTGCTCAACTGTGCCTGGGTTCTAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: LDYPCSKRTQKDSIL*YPQPPAQLCLGSRV Trigger: GACTCTAGAACCCAGGCACAGTTGAGCAGGGGGTTGTGGGTATCAGAGTATGCTGTCCTTTTGTGTCCTCTTAGAACAAGGATAGTCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR CCA 90 bp | ACAGGCCACTCTGCCAACTTTCAGCACGAACAGATCATCTACGAGTaGCAGGGAGGGATTCCACTTTCAAAAGCATTTCTGGGAGGATAT | + |
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Preference number: 1 (lower is better) Translates to: TGHSANFQHEQIIYE*QGGIPLSKAFLGGY Trigger: ATATCCTCCCAGAAATGCTTTTGAAAGTGGAATCCCTCCCTGCCACTCGTAGATGATCTGTTCGTGCTGAAAGTTGGCAGAGTGGCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGCCCAGGCTCTTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCTGTCCACCGAGGGACTGTGGTaGCAGACATGGCCAGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: SAQALGCCITLHPRACLSTEGLW*QTWPGQ Trigger: CTGGCCTGGCCATGTCTGTCACCACAGTCCCTCGGT...GGACAGACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGAGCCTGGGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR-3UTR CCA 90 bp | CTCACACCTGGCCTTGGCAGTGTGGTTCTGGGTGGGCTGTCTGTACACATCCAGGACGTCCTTCAGGTCTaGGTGGGAAGGCTGCCCTAC | + |
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Preference number: 2 (lower is better) Translates to: LTPGLGSVVLGGLSVHIQDVLQV*VGRLPY Trigger: GTAGGGCAGCCTTCCCACCCAGACCTGAAGGACGTC...CTGGATGTGTACAGACAGCCCACCCAGAACCACACTGCCAAGGCCAGGTGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGTCTGTGCATTCCCCCAGGGTAGAGATGTGGCTTCTGCCCAGGCTCTTGGCCCCCCTGCTCAACTGTaGCTGGGTTCTAGAGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: AVCAFPQGRDVASAQALGPPAQL*LGSRVK Trigger: CTTGACTCTAGAACCCAGGCACAGTTGAGCAGGGGG...GCCAAGAGCCTGGGCAGAAGCCACATCTCTACCCTGGGGGAATGCACAGACAGC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR-3UTR GCA 90 bp | GAACAAGGGAGGCAGACGTCCTTCAGGTCTGGGTGGGAAGGCTGCCCTACGTTTCCCACTCTGCAGGGATaGTATCAGGAGGGAGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: EQGRQTSFRSGWEGCPTFPTLQG*YQEGAK Trigger: CTTGGCTCCCTCCTGATAGCATCCCTGCAGAGTGGG...AAACGTAGGGCAGCCTTCCCACCCAGACCTGAAGGACGTCTGCCTCCCTTGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCTTCTGCCCAGGCTCTTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCCTGGCCTTGGCAGTGTaGTTCTGGGTGGGCTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: WLLPRLLAVVLLSTPEPVLALAV*FWVGCL Trigger: CAGACAGCCCACCCAGAACCACACTGCCAAGGCCAG...GACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGAGCCTGGGCAGAAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTCAGGTCTGGGTGGGAAGGCTGCCCTACGTTTTTCTGTCCTCCAAGTTGGTCCTCCACAAGGCACTTaGGCTGATCCCATCAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: PSGLGGKAALRFSVLQVGPPQGT*ADPIRP Trigger: GGGCCTGATGGGATCAGCTCAAGTGCCTTGTGGAGG...ACCAACTTGGAGGACAGAAAAACGTAGGGCAGCCTTCCCACCCAGACCTGAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGCCCAGGCTCTTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCTGTCCCCCATCAGGCCCCAGTaGCACACAAACCATGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: SAQALGCCITLHPRACLSPIRPQ*HTNHGN Trigger: GTTCCCATGGTTTGTGTGGCACTGGGGCCTGATGGG...GGACAGACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGAGCCTGGGCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCTTCTGCCCAGGCTCTTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCCCCACTCTGCAGGGATaGTATCAGGAGGGAGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: WLLPRLLAVVLLSTPEPVPTLQG*YQEGAK Trigger: CTTGGCTCCCTCCTGATAGCATCCCTGCAGAGTGGG...GACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGAGCCTGGGCAGAAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGTCTGTGCATTCCCCCAGGGTAGAGATGTGGCTTCTGCCCAGGCTCTTGGCTCAGGGGTCCTGGAGTaGTCAATGAAACCCCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: AVCAFPQGRDVASAQALGSGVLE*SMKPQG Trigger: ACCTTGGGGTTTCATTGAGCACTCCAGGACCCCTGA...GCCAAGAGCCTGGGCAGAAGCCACATCTCTACCCTGGGGGAATGCACAGACAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR-3UTR CCA 90 bp | CGTCCTTCAGGTCTGGGTGGGAAGGCTGCCCTACGTTTTTCTGTCCTCCAAGTTCTGCTAACCTGGGGCTaGTCCTCTAGGAAGGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: RPSGLGGKAALRFSVLQVLLTWG*SSRKGD Trigger: GTCCCCCTTCCTAGAGGACCAGCCCCAGGTTAGCAG...AACTTGGAGGACAGAAAAACGTAGGGCAGCCTTCCCACCCAGACCTGAAGGACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR-3UTR TCA 90 bp | AGACGTCCTTCAGGTCTGGGTGGGAAGGCTGCCCTACGTTTTTCTGTCCTCCAACCACCTCATCTCAGCTaGGGTTCAAGGACCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: RRPSGLGGKAALRFSVLQPPHLS*GSRTSS Trigger: GGAGCTGGTCCTTGAACCTCAGCTGAGATGAGGTGG...TTGGAGGACAGAAAAACGTAGGGCAGCCTTCCCACCCAGACCTGAAGGACGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTCAGGTCTGGGTGGGAAGGCTGCCCTACGTTTTTCTGTCCTCCAAGTTGGTCCACCTCATCTCAGCTaGGGTTCAAGGACCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: PSGLGGKAALRFSVLQVGPPHLS*GSRTSS Trigger: GGAGCTGGTCCTTGAACCTCAGCTGAGATGAGGTGG...ACCAACTTGGAGGACAGAAAAACGTAGGGCAGCCTTCCCACCCAGACCTGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR-3UTR TCA 90 bp | GATACCCACAACCCCCTGCTCAACTGTGCCTGGGTTCTAGAGTCAAGGACAAGCCCACCTCATCTCAGCTaGGGTTCAAGGACCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: DTHNPLLNCAWVLESRTSPPHLS*GSRTSS Trigger: GGAGCTGGTCCTTGAACCTCAGCTGAGATGAGGTGG...GCTTGTCCTTGACTCTAGAACCCAGGCACAGTTGAGCAGGGGGTTGTGGGTATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCTGTCCTTACCCACTGCCACCTCCACAAGGCACTTaGGCTGATCCCATCAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: LAVVLLSTPEPVCPYPLPPPQGT*ADPIRP Trigger: GGGCCTGATGGGATCAGCTCAAGTGCCTTGTGGAGG...TGGCAGTGGGTAAGGACAGACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGTCTGTGCATTCCCCCAGGGTAGAGATGTGGCTTCTGCCCAGGCTCTTGGCAGGAAAACTGAAGGCTaGGACATTCTCCCTTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: AVCAFPQGRDVASAQALGRKTEG*DILPSP Trigger: GGGAGAAGGGAGAATGTCTCAGCCTTCAGTTTTCCT...GCCAAGAGCCTGGGCAGAAGCCACATCTCTACCCTGGGGGAATGCACAGACAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR-3UTR GCA 90 bp | CTATCAGGAGGGAGCCAAGGTCGGTTCTCTGAGACTGAAGACCAGACCAGACCACCCATCAGGCCCCAGTaGCACACAAACCATGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: LSGGSQGRFSETEDQTRPPIRPQ*HTNHGN Trigger: GTTCCCATGGTTTGTGTGGCACTGGGGCCTGATGGG...TGGTCTGGTCTGGTCTTCAGTCTCAGAGAACCGACCTTGGCTCCCTCCTGATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCTTCTGCCCAGGCTCTTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCCCCCCTGCTCAACTGTaGCTGGGTTCTAGAGTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: WLLPRLLAVVLLSTPEPVPPAQL*LGSRVK Trigger: CTTGACTCTAGAACCCAGGCACAGTTGAGCAGGGGG...GACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGAGCCTGGGCAGAAGCCA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGCAGGTGTCCCTGGGATACTCATAGCCTCAGACTGGTTACAGAGTTGGGGCAGGTTCAGAGGGAGTaGTGGTGGGACCGTCAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: CCRCPWDTHSLRLVTELGQVQRE*WWDRQN Trigger: GTTCTGACGGTCCCACCACCACTCCCTCTGAACCTG...CCCCAACTCTGTAACCAGTCTGAGGCTATGAGTATCCCAGGGACACCTGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | GATACCCACAACCCCCTGCTCAACTGTGCCTGGGTTCTAGAGTCAAGGACAAGCCAGGTTCAGAGGGAGTaGTGGTGGGACCGTCAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: DTHNPLLNCAWVLESRTSQVQRE*WWDRQN Trigger: GTTCTGACGGTCCCACCACCACTCCCTCTGAACCTG...GCTTGTCCTTGACTCTAGAACCCAGGCACAGTTGAGCAGGGGGTTGTGGGTATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCCTGGCTCTCATTTGCAAGTCAAAACTTCTTCCTGGAGGCGGCCAGCTCAGAGACGTCCTTCAGGTCTaGGTGGGAAGGCTGCCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: CLALICKSKLLPGGGQLRDVLQV*VGRLPY Trigger: GTAGGGCAGCCTTCCCACCCAGACCTGAAGGACGTC...TCTGAGCTGGCCGCCTCCAGGAAGAAGTTTTGACTTGCAAATGAGAGCCAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR CAA 90 bp | TCTGTGCATTCCCCCAGGGTAGAGATGTGGCTTCTGCCCAGGCTCTaGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCTGTCCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: SVHSPRVEMWLLPRL*AVVLLSTPEPVCPY Trigger: GTAAGGACAGACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGAGCCTGGGCAGAAGCCACATCTCTACCCTGGGGGAATGCACAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGCTTCTGCCCAGGCTCTTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCAAGGACAGCATACTCTaGTACCCACAACCCCCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: WLLPRLLAVVLLSTPEPVKDSIL*YPQPPA Trigger: AGCAGGGGGTTGTGGGTATCAGAGTATGCTGTCCTT...GACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGAGCCTGGGCAGAAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR GCA 90 bp | GAACAAGGGAGGCAGACGTCCTTCAGGTCTGGGTGGGAAGGCTGCCCTACGTTTTTTCAGTCTTGGTCCTaGACCTTTGAGTCCCCACCT | + |
|
Preference number: 2 (lower is better) Translates to: EQGRQTSFRSGWEGCPTFFQSWS*TFESPP Trigger: AGGTGGGGACTCAAAGGTGCAGGACCAAGACTGAAA...AAACGTAGGGCAGCCTTCCCACCCAGACCTGAAGGACGTCTGCCTCCCTTGTTC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCTGTCCTTACCCACTGCCCAAGGAAGCCCAGCTaGCAGCCCCCTTCCTATTTG | + |
|
Preference number: 2 (lower is better) Translates to: SWLLYYSPPQSLSVLTHCPRKPS*QPPSYL Trigger: CAAATAGGAAGGGGGCTGGCAGCTGGGCTTCCTTGG...GCAGTGGGTAAGGACAGACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCTGTCCTTACCCACTGCCACCCATCAGGCCCCAGTaGCACACAAACCATGGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LAVVLLSTPEPVCPYPLPPIRPQ*HTNHGN Trigger: GTTCCCATGGTTTGTGTGGCACTGGGGCCTGATGGG...TGGCAGTGGGTAAGGACAGACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTCAAGGACAAGCGAGGTAGCCACAAACCACAACCAAGACCAACTTCCCAGCTGCTAACCTGGGGCTaGTCCTCTAGGAAGGGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: RVKDKRGSHKPQPRPTSQLLTWG*SSRKGD Trigger: GTCCCCCTTCCTAGAGGACCAGCCCCAGGTTAGCAG...CTGGGAAGTTGGTCTTGGTTGTGGTTTGTGGCTACCTCGCTTGTCCTTGACTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCAACTTTCAGCACGAACAGATCATCTACGAGTGGCAGGGAGGGATTCCACTGTGCATCACGAACATaGATGCCCAGGGGCCACACG | + |
|
Preference number: 2 (lower is better) Translates to: LPTFSTNRSSTSGREGFHCASRT*MPRGHT Trigger: CGTGTGGCCCCTGGGCATCCATGTTCGTGATGCACA...GTGGAATCCCTCCCTGCCACTCGTAGATGATCTGTTCGTGCTGAAAGTTGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTTCTGCCCAGGCTCTTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCCAGTGTGGTTCTGGGTaGGCTGTCTGTACACATCCA | + |
|
Preference number: 2 (lower is better) Translates to: WLLPRLLAVVLLSTPEPVQCGSG*AVCTHP Trigger: TGGATGTGTACAGACAGCCCACCCAGAACCACACTG...GACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGAGCCTGGGCAGAAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR CAA 90 bp | TGTATAAGAAGTCCAAGGAAGCCCAGCTGCCAGCCCCCTTCCTATTaGCTTTCAAATAGGCGGGCTGTGGAACACCGAGGGACTGTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: CIRSPRKPSCQPPSY*LSNRRAVEHRGTVV Trigger: CACCACAGTCCCTCGGTGTTCCACAGCCCGCCTATTTGAAAGCAAATAGGAAGGGGGCTGGCAGCTGGGCTTCCTTGGACTTCTTATACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCCTGGCTCTCATTTGCAAGTCAAAACTTCTTCCTGGAGGCGGCCAGCTCAGACCCAAAGATTACACCTaGAGTAGGCCTCAGGGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: CLALICKSKLLPGGGQLRPKDYT*SRPQGS Trigger: GGACCCCTGAGGCCTACTTCAGGTGTAATCTTTGGG...TCTGAGCTGGCCGCCTCCAGGAAGAAGTTTTGACTTGCAAATGAGAGCCAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGCCAACTTTCAGCACGAACAGATCATCTACGAGTGGCAGGGAGGGATTCCACCCCAAAGATTACACCTaGAGTAGGCCTCAGGGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: LPTFSTNRSSTSGREGFHPKDYT*SRPQGS Trigger: GGACCCCTGAGGCCTACTTCAGGTGTAATCTTTGGG...GTGGAATCCCTCCCTGCCACTCGTAGATGATCTGTTCGTGCTGAAAGTTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGGGCTACGGAACCCAAGTCCTCCACAAGGCACTTGAGCTGATCCCATCAGGCCAGAACACAGGGCTATaGTCTTCCAGAGACTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: MGYGTQVLHKALELIPSGQNTGL*SSRDSP Trigger: AGGAGAGTCTCTGGAAGAGCATAGCCCTGTGTTCTG...GCCTGATGGGATCAGCTCAAGTGCCTTGTGGAGGACTTGGGTTCCGTAGCCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTGTCTGTGCATTCCCCCAGGGTAGAGATGTGGCTTCTGCCCAGGCTCTTGGCCCTTTCCATTTTAGCTaGCAGTTCCAGTCCAAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: AVCAFPQGRDVASAQALGPFHFS*QFQSKV Trigger: AACCTTGGACTGGAACTGGCAGCTAAAATGGAAAGG...GCCAAGAGCCTGGGCAGAAGCCACATCTCTACCCTGGGGGAATGCACAGACAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGGGCTACGGAACCCAAGTCCTCCACAAGGCACTTGAGCTGATCCCATCAGGCAGCCCCCTTCCTATTTaGTTTCAAATAGGCGGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: MGYGTQVLHKALELIPSGSPLPI*FQIGGL Trigger: CAGCCCGCCTATTTGAAAGCAAATAGGAAGGGGGCT...GCCTGATGGGATCAGCTCAAGTGCCTTGTGGAGGACTTGGGTTCCGTAGCCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCTACTTGAACAGGCAGAGGATTCTGACAGGGAGAGGGCTCCATCACACAAGTCCAAGGAAGCCCAGCTaGCAGCCCCCTTCCTATTTG | + |
|
Preference number: 2 (lower is better) Translates to: LYLNRQRILTGRGLHHTSPRKPS*QPPSYL Trigger: CAAATAGGAAGGGGGCTGGCAGCTGGGCTTCCTTGG...ACTTGTGTGATGGAGCCCTCTCCCTGTCAGAATCCTCTGCCTGTTCAAGTAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | GAACAAGGGAGGCAGACGTCCTTCAGGTCTGGGTGGGAAGGCTGCCCTACGTTTGGAACATTTCAGTCTTaGTCCTGCACCTTTGAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: EQGRQTSFRSGWEGCPTFGTFQS*SCTFES Trigger: GGACTCAAAGGTGCAGGACCAAGACTGAAATGTTCC...AAACGTAGGGCAGCCTTCCCACCCAGACCTGAAGGACGTCTGCCTCCCTTGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCCCAGGCTCTTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCTGTCCATTCCTACCCACAGCTaGAGTTGTGTGCTCAGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: SAQALGCCITLHPRACLSIPTHS*SCVLRC Trigger: ACACCTGAGCACACAACTCCAGCTGTGGGTAGGAAT...GGACAGACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGAGCCTGGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCCCAGGCTCTTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCTGTCCGTCAAAACTTCTTCCTaGAGGCGGCCAGCTCAGATT | + |
|
Preference number: 2 (lower is better) Translates to: SAQALGCCITLHPRACLSVKTSS*RRPAQI Trigger: AATCTGAGCTGGCCGCCTCCAGGAAGAAGTTTTGAC...GGACAGACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGAGCCTGGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGGCTCAAAGTGTGGTCACCCCACTTCTCTAACCCTCTATGTCAAGCCATGTGTGCATCACGAACATaGATGCCCAGGGGCCACACG | + |
|
Preference number: 2 (lower is better) Translates to: RGLKVWSPHFSNPLCQAMCASRT*MPRGHT Trigger: CGTGTGGCCCCTGGGCATCCATGTTCGTGATGCACA...CATGGCTTGACATAGAGGGTTAGAGAAGTGGGGTGACCACACTTTGAGCCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTTCTGCCCAGGCTCTTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCCAGATCATCTACGAGTaGCAGGGAGGGATTCCACTT | + |
|
Preference number: 2 (lower is better) Translates to: WLLPRLLAVVLLSTPEPVQIIYE*QGGIPL Trigger: AAGTGGAATCCCTCCCTGCCACTCGTAGATGATCTG...GACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGAGCCTGGGCAGAAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| 3UTR CAA 90 bp | TCTGAGACTGAAGACCAGACCAGACCAGACCTCCATCTCCTCTACTaGAACAGGCAGAGGATTCTGACAGGGAGAGGGCTCCATCACACA | + |
|
Preference number: 2 (lower is better) Translates to: SETEDQTRPDLHLLY*NRQRILTGRGLHHT Trigger: TGTGTGATGGAGCCCTCTCCCTGTCAGAATCCTCTGCCTGTTCAAGTAGAGGAGATGGAGGTCTGGTCTGGTCTGGTCTTCAGTCTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGAATAAAGCAGACATTAGGTGTCTTCCTGCAATCCTTCCTCTGAAGCACCCCACCGAGGGACTGTGGTaGCAGACATGGCCAGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: KNKADIRCLPAILPLKHPTEGLW*QTWPGQ Trigger: CTGGCCTGGCCATGTCTGTCACCACAGTCCCTCGGT...GGGGTGCTTCAGAGGAAGGATTGCAGGAAGACACCTAATGTCTGCTTTATTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCCTGGCTCTCATTTGCAAGTCAAAACTTCTTCCTGGAGGCGGCCAGCTCAGATCTGGGTGGGAAGGCTaGCCTACGTTTTTCTGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: CLALICKSKLLPGGGQLRSGWEG*PTFFCP Trigger: AGGACAGAAAAACGTAGGGCAGCCTTCCCACCCAGA...TCTGAGCTGGCCGCCTCCAGGAAGAAGTTTTGACTTGCAAATGAGAGCCAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGGCTCAAAGTGTGGTCACCCCACTTCTCTAACCCTCTATGTCAAGCCATGTCCTTCAGGTCTGGGTaGGAAGGCTGCCCTACGTTT | + |
|
Preference number: 2 (lower is better) Translates to: RGLKVWSPHFSNPLCQAMSFRSG*EGCPTF Trigger: AAACGTAGGGCAGCCTTCCCACCCAGACCTGAAGGA...CATGGCTTGACATAGAGGGTTAGAGAAGTGGGGTGACCACACTTTGAGCCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR GCA 90 bp | GGACACAAAAGGACAGCATACTCTGATACCCACAACCCCCTGCTCAACTGTGCCCAGAACACAGGGCTATaGTCTTCCAGAGACTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: GHKRTAYSDTHNPLLNCAQNTGL*SSRDSP Trigger: AGGAGAGTCTCTGGAAGAGCATAGCCCTGTGTTCTG...GGCACAGTTGAGCAGGGGGTTGTGGGTATCAGAGTATGCTGTCCTTTTGTGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGCACAGGCCACTCTGCCAACTTTCAGCACGAACAGATCATCTACGAGTGGCACAGAACACAGGGCTATaGTCTTCCAGAGACTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: RHRPLCQLSARTDHLRVAQNTGL*SSRDSP Trigger: AGGAGAGTCTCTGGAAGAGCATAGCCCTGTGTTCTG...TGCCACTCGTAGATGATCTGTTCGTGCTGAAAGTTGGCAGAGTGGCCTGTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCTGTCCTTACCCACTGCTTTCAGTCTTGGTCCTaGACCTTTGAGTCCCCACCT | + |
|
Preference number: 2 (lower is better) Translates to: SWLLYYSPPQSLSVLTHCFQSWS*TFESPP Trigger: AGGTGGGGACTCAAAGGTGCAGGACCAAGACTGAAA...GCAGTGGGTAAGGACAGACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCTGTCCTTACCCACTGCAGCCCCCTTCCTATTTaGTTTCAAATAGGCGGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SWLLYYSPPQSLSVLTHCSPLPI*FQIGGL Trigger: CAGCCCGCCTATTTGAAAGCAAATAGGAAGGGGGCT...GCAGTGGGTAAGGACAGACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR GCA 90 bp | TACCAAACCCACATCCACATTCTGATGTCTGAGCACCCACCTTCTCATTTCCCCCCCCCTGCTCAACTGTaGCTGGGTTCTAGAGTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: YQTHIHILMSEHPPSHFPPPAQL*LGSRVK Trigger: CTTGACTCTAGAACCCAGGCACAGTTGAGCAGGGGG...GGGGAAATGAGAAGGTGGGTGCTCAGACATCAGAATGTGGATGTGGGTTTGGTA 52% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCACACCTGGCCTTGGCAGTGTGGTTCTGGGTGGGCTGTCTGTACACATCCAGTGCCTGGCTCTCATTTaGAAGTCAAAACTTCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LTPGLGSVVLGGLSVHIQCLALI*KSKLLP Trigger: AGGAAGAAGTTTTGACTTGCAAATGAGAGCCAGGCA...CTGGATGTGTACAGACAGCCCACCCAGAACCACACTGCCAAGGCCAGGTGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | CTATCAGGAGGGAGCCAAGGTCGGTTCTCTGAGACTGAAGACCAGACCAGACCAGGAACATTTCAGTCTTaGTCCTGCACCTTTGAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: LSGGSQGRFSETEDQTRPGTFQS*SCTFES Trigger: GGACTCAAAGGTGCAGGACCAAGACTGAAATGTTCC...TGGTCTGGTCTGGTCTTCAGTCTCAGAGAACCGACCTTGGCTCCCTCCTGATAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTCAGGAGCCTTTGCAGCTGTCTGTGCATTCCCCCAGGGTAGAGATGTGGCTTTCCAGTCCAAGGTTGTaGGAACATTTCAGTCTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: AQEPLQLSVHSPRVEMWLSSPRL*EHFSLG Trigger: ACCAAGACTGAAATGTTCCCACAACCTTGGACTGGA...AAGCCACATCTCTACCCTGGGGGAATGCACAGACAGCTGCAAAGGCTCCTGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCTGTCCTTACCCACTGCCTGCTCAACTGTGCCTaGGTTCTAGAGTCAAGGACA | + |
|
Preference number: 2 (lower is better) Translates to: SWLLYYSPPQSLSVLTHCLLNCA*VLESRT Trigger: TGTCCTTGACTCTAGAACCCAGGCACAGTTGAGCAG...GCAGTGGGTAAGGACAGACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTCAGGAGCCTTTGCAGCTGTCTGTGCATTCCCCCAGGGTAGAGATGTGGCTTTGTCCTCCAAGTTGGTaGCCGAATGAATTTCAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: AQEPLQLSVHSPRVEMWLCPPSW*PNEFQS Trigger: TGACTGAAATTCATTCGGCCACCAACTTGGAGGACA...AAGCCACATCTCTACCCTGGGGGAATGCACAGACAGCTGCAAAGGCTCCTGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGCCTACGCTTCTTGTCCAGCCCACGTCTGTCCTTCCCAGTTTCTCCTTTTGTAGCCCCCTTCCTATTTaGTTTCAAATAGGCGGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: MPTLLVQPTSVLPSFSFCSPLPI*FQIGGL Trigger: CAGCCCGCCTATTTGAAAGCAAATAGGAAGGGGGCT...ACAAAAGGAGAAACTGGGAAGGACAGACGTGGGCTGGACAAGAAGCGTAGGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGAATAAAGCAGACATTAGGTGTCTTCCTGCAATCCTTCCTCTGAAGCACCCCCAGGTTCAGAGGGAGTaGTGGTGGGACCGTCAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: KNKADIRCLPAILPLKHPQVQRE*WWDRQN Trigger: GTTCTGACGGTCCCACCACCACTCCCTCTGAACCTG...GGGGTGCTTCAGAGGAAGGATTGCAGGAAGACACCTAATGTCTGCTTTATTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCTGTCCTTACCCACTGCGGAACATTTCAGTCTTaGTCCTGCACCTTTGAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: SWLLYYSPPQSLSVLTHCGTFQS*SCTFES Trigger: GGACTCAAAGGTGCAGGACCAAGACTGAAATGTTCC...GCAGTGGGTAAGGACAGACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | CTATCAGGAGGGAGCCAAGGTCGGTTCTCTGAGACTGAAGACCAGACCAGACCATCCAGTCCAAGGTTGTaGGAACATTTCAGTCTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: LSGGSQGRFSETEDQTRPSSPRL*EHFSLG Trigger: ACCAAGACTGAAATGTTCCCACAACCTTGGACTGGA...TGGTCTGGTCTGGTCTTCAGTCTCAGAGAACCGACCTTGGCTCCCTCCTGATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGGCTCAAAGTGTGGTCACCCCACTTCTCTAACCCTCTATGTCAAGCCATGCTGCTCAACTGTGCCTaGGTTCTAGAGTCAAGGACA | + |
|
Preference number: 2 (lower is better) Translates to: RGLKVWSPHFSNPLCQAMLLNCA*VLESRT Trigger: TGTCCTTGACTCTAGAACCCAGGCACAGTTGAGCAG...CATGGCTTGACATAGAGGGTTAGAGAAGTGGGGTGACCACACTTTGAGCCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTACTTGAACAGGCAGAGGATTCTGACAGGGAGAGGGCTCCATCACACAAGTCTGCTCAACTGTGCCTaGGTTCTAGAGTCAAGGACA | + |
|
Preference number: 2 (lower is better) Translates to: LYLNRQRILTGRGLHHTSLLNCA*VLESRT Trigger: TGTCCTTGACTCTAGAACCCAGGCACAGTTGAGCAG...ACTTGTGTGATGGAGCCCTCTCCCTGTCAGAATCCTCTGCCTGTTCAAGTAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAAAAGCATTTCTGGGAGGATATCTTTCTCAGCGTATCCTCTTTCCCAGTGACGACGTCCTTCAGGTCTaGGTGGGAAGGCTGCCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: SKAFLGGYLSQRILFPSDDVLQV*VGRLPY Trigger: GTAGGGCAGCCTTCCCACCCAGACCTGAAGGACGTC...GTCACTGGGAAAGAGGATACGCTGAGAAAGATATCCTCCCAGAAATGCTTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAAAAGCATTTCTGGGAGGATATCTTTCTCAGCGTATCCTCTTTCCCAGTGACCCCACTCTGCAGGGATaGTATCAGGAGGGAGCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: SKAFLGGYLSQRILFPSDPTLQG*YQEGAK Trigger: CTTGGCTCCCTCCTGATAGCATCCCTGCAGAGTGGG...GTCACTGGGAAAGAGGATACGCTGAGAAAGATATCCTCCCAGAAATGCTTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGGATATCTTTCTCAGCGTATCCTCTTTCCCAGTGACAGAAAAATCCCAGCCCTCTGGGTGGGAAGGCTaGCCTACGTTTTTCTGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: EDIFLSVSSFPVTEKSQPSGWEG*PTFFCP Trigger: AGGACAGAAAAACGTAGGGCAGCCTTCCCACCCAGA...GGGCTGGGATTTTTCTGTCACTGGGAAAGAGGATACGCTGAGAAAGATATCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCTGTCCTTACCCACTGCAAACACATTCATACTTaGAGAGGCACAGGCCACTCT | + |
|
Preference number: 2 (lower is better) Translates to: SWLLYYSPPQSLSVLTHCKHIHT*RGTGHS Trigger: AGAGTGGCCTGTGCCTCTGCAAGTATGAATGTGTTT...GCAGTGGGTAAGGACAGACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | GGACACAAAAGGACAGCATACTCTGATACCCACAACCCCCTGCTCAACTGTGCCTCCAGTCCAAGGTTGTaGGAACATTTCAGTCTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: GHKRTAYSDTHNPLLNCASSPRL*EHFSLG Trigger: ACCAAGACTGAAATGTTCCCACAACCTTGGACTGGA...GGCACAGTTGAGCAGGGGGTTGTGGGTATCAGAGTATGCTGTCCTTTTGTGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCCTGGCTCTCATTTGCAAGTCAAAACTTCTTCCTGGAGGCGGCCAGCTCAGACATGTTCAGAAGCCCTaGCTTAGAAACACTCTGATC | + |
|
Preference number: 2 (lower is better) Translates to: CLALICKSKLLPGGGQLRHVQKP*LRNTLI Trigger: GATCAGAGTGTTTCTAAGCCAGGGCTTCTGAACATG...TCTGAGCTGGCCGCCTCCAGGAAGAAGTTTTGACTTGCAAATGAGAGCCAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | TACCAAACCCACATCCACATTCTGATGTCTGAGCACCCACCTTCTCATTTCCCCCAGATCATCTACGAGTaGCAGGGAGGGATTCCACTT | + |
|
Preference number: 2 (lower is better) Translates to: YQTHIHILMSEHPPSHFPQIIYE*QGGIPL Trigger: AAGTGGAATCCCTCCCTGCCACTCGTAGATGATCTG...GGGGAAATGAGAAGGTGGGTGCTCAGACATCAGAATGTGGATGTGGGTTTGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGAATAAAGCAGACATTAGGTGTCTTCCTGCAATCCTTCCTCTGAAGCACCCCAAGGACAGCATACTCTaGTACCCACAACCCCCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: KNKADIRCLPAILPLKHPKDSIL*YPQPPA Trigger: AGCAGGGGGTTGTGGGTATCAGAGTATGCTGTCCTT...GGGGTGCTTCAGAGGAAGGATTGCAGGAAGACACCTAATGTCTGCTTTATTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTTCTAGAGTCAAGGACAAGCGAGGTAGCCACAAACCACAACCAAGACCAACTCCTTTCCATTTTAGCTaGCAGTTCCAGTCCAAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: GSRVKDKRGSHKPQPRPTPFHFS*QFQSKV Trigger: AACCTTGGACTGGAACTGGCAGCTAAAATGGAAAGG...AGTTGGTCTTGGTTGTGGTTTGTGGCTACCTCGCTTGTCCTTGACTCTAGAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGATATCTTTCTCAGCGTATCCTCTTTCCCAGTGACAGAAAAATCCCAGCCCCCCCTTAAGTTGTGGTaGACCATCTCCCAATACACT | + |
|
Preference number: 2 (lower is better) Translates to: EDIFLSVSSFPVTEKSQPPLKLW*TISQYT Trigger: AGTGTATTGGGAGATGGTCCACCACAACTTAAGGGG...GGGCTGGGATTTTTCTGTCACTGGGAAAGAGGATACGCTGAGAAAGATATCCTC 48% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGATATCTTTCTCAGCGTATCCTCTTTCCCAGTGACAGAAAAATCCCAGCCCCAACACCGCTCTTCTTaGGGAGATAAGAAAAGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: EDIFLSVSSFPVTEKSQPQHRSS*GDKKRY Trigger: ATACCTTTTCTTATCTCCTCAAGAAGAGCGGTGTTG...GGGCTGGGATTTTTCTGTCACTGGGAAAGAGGATACGCTGAGAAAGATATCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR GCA 90 bp | TCAAAAGCATTTCTGGGAGGATATCTTTCTCAGCGTATCCTCTTTCCCAGTGACCCTTTCCATTTTAGCTaGCAGTTCCAGTCCAAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: SKAFLGGYLSQRILFPSDPFHFS*QFQSKV Trigger: AACCTTGGACTGGAACTGGCAGCTAAAATGGAAAGG...GTCACTGGGAAAGAGGATACGCTGAGAAAGATATCCTCCCAGAAATGCTTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGAATTTCAGTCAACAATTTTCACCCCTTCCAAGCAAAGAAACACAAGCATTCATACCCACAACCCCCTaGTCAACTGTGCCTGGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: MNFSQQFSPLPSKETQAFIPTTP*STVPGF Trigger: GAACCCAGGCACAGTTGAGCAGGGGGTTGTGGGTAT...GAATGCTTGTGTTTCTTTGCTTGGAAGGGGTGAAAATTGTTGACTGAAATTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGAATTTCAGTCAACAATTTTCACCCCTTCCAAGCAAAGAAACACAAGCATTCCAACACCGCTCTTCTTaGGGAGATAAGAAAAGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: MNFSQQFSPLPSKETQAFQHRSS*GDKKRY Trigger: ATACCTTTTCTTATCTCCTCAAGAAGAGCGGTGTTG...GAATGCTTGTGTTTCTTTGCTTGGAAGGGGTGAAAATTGTTGACTGAAATTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR GCA 72 bp | GGCAGGCACCAGCAAGGGTGGGATGGGACGGCCTGGTaGAGGAGTCCATCCAAGGACCGGTATTACTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GRHQQGWDGTAW*RSPSKDRYYSP Trigger: GGGAGAGTAATACCGGTCCTTGGATGGACTCCTGCACCAGGCCGTCCCATCCCACCCTTGCTGGTGCCTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR GCA 72 bp | CCAGCCCAGCAGAACCCTCTAACAGCAAAGGGTCTGTaGATCACGAACATGGATGCCCAGGGGCCACACGGC | + |
|
Preference number: 3 (lower is better) Translates to: PAQQNPLTAKGL*ITNMDAQGPHG Trigger: GCCGTGTGGCCCCTGGGCATCCATGTTCGTGATGCACAGACCCTTTGCTGTTAGAGGGTTCTGCTGGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR TCA 72 bp | CAAATAGGCGGGCTGTGGAACACCGAGGGACTGTGGTaGCAGACATGGCCAGGCCAGCCACAGTCCTTGATG | + |
|
Preference number: 3 (lower is better) Translates to: QIGGLWNTEGLW*QTWPGQPQSLM Trigger: CATCAAGGACTGTGGCTGGCCTGGCCATGTCTGTCACCACAGTCCCTCGGTGTTCCACAGCCCGCCTATTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR TCA 72 bp | CCCAGAGCCTGTCTGTCCTTACCCACTGCCAGCTTCTaGGCCTCTCACACCTGGCCTTGGCAGTGTGGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PRACLSLPTASF*ASHTWPWQCGS Trigger: AGAACCACACTGCCAAGGCCAGGTGTGAGAGGCTCAGAAGCTGGCAGTGGGTAAGGACAGACAGGCTCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR GCA 72 bp | AGGGAGTGGTGGTGGGACCGTCAGAACACAGGGCTATaGTCTTCCAGAGACTCTCCTCAGCACTCCCACCAC | + |
|
Preference number: 3 (lower is better) Translates to: REWWWDRQNTGL*SSRDSPQHSHH Trigger: GTGGTGGGAGTGCTGAGGAGAGTCTCTGGAAGAGCATAGCCCTGTGTTCTGACGGTCCCACCACCACTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR GCA 72 bp | TACTCTCCACCCCAGAGCCTGTCTGTCCTTACCCACTaGCAGCTTCTGAGCCTCTCACACCTGGCCTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: YSPPQSLSVLTH*QLLSLSHLALA Trigger: TGCCAAGGCCAGGTGTGAGAGGCTCAGAAGCTGGCAGTGGGTAAGGACAGACAGGCTCTGGGGTGGAGAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR CCA 72 bp | CCGATGTCCTCAGACGCTCTTCTGCTAACCTGGGGCTaGTCCTCTAGGAAGGGGGACAGGTTCAGAGGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: PMSSDALLLTWG*SSRKGDRFRGS Trigger: ACTCCCTCTGAACCTGTCCCCCTTCCTAGAGGACCAGCCCCAGGTTAGCAGAAGAGCGTCTGAGGACATCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGTCTGTGCATTCCCCCAGGGTAGAGATGTGGCTTCTGCCCAGGCTCTTGGCCTTGGTCCTGCACCTTaGAGTCCCCACCTCATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: AVCAFPQGRDVASAQALGLGPAP*SPHLIS Trigger: TGAGATGAGGTGGGGACTCAAAGGTGCAGGACCAAG...GCCAAGAGCCTGGGCAGAAGCCACATCTCTACCCTGGGGGAATGCACAGACAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCACACCTGGCCTTGGCAGTGTGGTTCTGGGTGGGCTGTCTGTACACATCCAGGGCCAGCCACAGTCCTaGATGTGCTTCAGGACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LTPGLGSVVLGGLSVHIQGQPQS*MCFRTV Trigger: GACAGTCCTGAAGCACATCAAGGACTGTGGCTGGCC...CTGGATGTGTACAGACAGCCCACCCAGAACCACACTGCCAAGGCCAGGTGTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR TCA 72 bp | GCTACGGAACCCAAGTCCTCCACAAGGCACTTGAGCTaGTCCCATCAGGCCCCAGTGCCACACAAACCATGG | + |
|
Preference number: 3 (lower is better) Translates to: ATEPKSSTRHLS*SHQAPVPHKPW Trigger: CCATGGTTTGTGTGGCACTGGGGCCTGATGGGATCAGCTCAAGTGCCTTGTGGAGGACTTGGGTTCCGTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR GCA 72 bp | GTCCAAGGAAGCCCAGCTGCCAGCCCCCTTCCTATTTaGTTTCAAATAGGCGGGCTGTGGAACACCGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: VQGSPAASPLPI*FQIGGLWNTEG Trigger: TCCCTCGGTGTTCCACAGCCCGCCTATTTGAAAGCAAATAGGAAGGGGGCTGGCAGCTGGGCTTCCTTGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CAA 90 bp | CGTCCTTCAGGTCTGGGTGGGAAGGCTGCCCTACGTTTTTCTGTCCTCCAAGTTCAAGGACCAGCTCCCTaGCCCAAGAATGCTGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RPSGLGGKAALRFSVLQVQGPAP*PKNAAG Trigger: ACCTGCAGCATTCTTGGGCAAGGGAGCTGGTCCTTG...AACTTGGAGGACAGAAAAACGTAGGGCAGCCTTCCCACCCAGACCTGAAGGACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR TCA 72 bp | TGGTCCTGCACCTTTGAGTCCCCACCTCATCTCAGCTaGGGTTCAAGGACCAGCTCCCTTGCCCAAGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: WSCTFESPPHLS*GSRTSSLAQEC Trigger: GCATTCTTGGGCAAGGGAGCTGGTCCTTGAACCTCAGCTGAGATGAGGTGGGGACTCAAAGGTGCAGGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR TCA 72 bp | TGTGGTGACAGACATGGCCAGGCCAGCCACAGTCCTTaGTGTGCTTCAGGACTGTCCCCTCCACATTACCTG | + |
|
Preference number: 3 (lower is better) Translates to: CGDRHGQASHSP*CASGLSPPHYL Trigger: CAGGTAATGTGGAGGGGACAGTCCTGAAGCACATCAAGGACTGTGGCTGGCCTGGCCATGTCTGTCACCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR TCA 72 bp | AATGGGCTACGGAACCCAAGTCCTCCACAAGGCACTTaGGCTGATCCCATCAGGCCCCAGTGCCACACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: NGLRNPSPPQGT*ADPIRPQCHTN Trigger: GTTTGTGTGGCACTGGGGCCTGATGGGATCAGCTCAAGTGCCTTGTGGAGGACTTGGGTTCCGTAGCCCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR GCA 72 bp | CTCCCACCTAGGCAGAACGCCACTGTCTGCAGGGCCTaGTCTGACCCAGGAAACACATTCATACTTGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LPPRQNATVCRA*SDPGNTFILAE Trigger: CTCTGCAAGTATGAATGTGTTTCCTGGGTCAGAGCAGGCCCTGCAGACAGTGGCGTTCTGCCTAGGTGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR CCA 72 bp | GCTGCAGGTGTCCCTGGGATACTCATAGCCTCAGACTaGTTACAGAGTTGGGGCTTTGGAGCCGATGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: AAGVPGILIASD*LQSWGFGADVL Trigger: GAGGACATCGGCTCCAAAGCCCCAACTCTGTAACCAGTCTGAGGCTATGAGTATCCCAGGGACACCTGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR CCA 72 bp | GCCTCTCACACCTGGCCTTGGCAGTGTGGTTCTGGGTaGGCTGTCTGTACACATCCAGTTCTCTCTCACTTC | + |
|
Preference number: 3 (lower is better) Translates to: ASHTWPWQCGSG*AVCTHPVLSHF Trigger: GAAGTGAGAGAGAACTGGATGTGTACAGACAGCCCACCCAGAACCACACTGCCAAGGCCAGGTGTGAGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR CCA 72 bp | CAGCTTCTGAGCCTCTCACACCTGGCCTTGGCAGTGTaGTTCTGGGTGGGCTGTCTGTACACATCCAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QLLSLSHLALAV*FWVGCLYTSSS Trigger: AGAACTGGATGTGTACAGACAGCCCACCCAGAACCACACTGCCAAGGCCAGGTGTGAGAGGCTCAGAAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCTGCCAGCCCCCTTCCTATTTGCTTTCAAATAGGCGGGCTGTGGAACACCGATACAGAGTTGGGGCTTaGGAGCCGATGTCCTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SCQPPSYLLSNRRAVEHRYRVGA*EPMSSD Trigger: GTCTGAGGACATCGGCTCCAAAGCCCCAACTCTGTA...TCGGTGTTCCACAGCCCGCCTATTTGAAAGCAAATAGGAAGGGGGCTGGCAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CAA 90 bp | GGACACAAAAGGACAGCATACTCTGATACCCACAACCCCCTGCTCAACTGTGCCCAAGGACCAGCTCCCTaGCCCAAGAATGCTGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: GHKRTAYSDTHNPLLNCAQGPAP*PKNAAG Trigger: ACCTGCAGCATTCTTGGGCAAGGGAGCTGGTCCTTG...GGCACAGTTGAGCAGGGGGTTGTGGGTATCAGAGTATGCTGTCCTTTTGTGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCTGTCCTTACCCACTGCGGCCAGCCACAGTCCTaGATGTGCTTCAGGACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SWLLYYSPPQSLSVLTHCGQPQS*MCFRTV Trigger: GACAGTCCTGAAGCACATCAAGGACTGTGGCTGGCC...GCAGTGGGTAAGGACAGACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGGCTCAAAGTGTGGTCACCCCACTTCTCTAACCCTCTATGTCAAGCCATGCTCTCACACCTGGCCTaGGCAGTGTGGTTCTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: RGLKVWSPHFSNPLCQAMLSHLA*AVWFWV Trigger: CACCCAGAACCACACTGCCAAGGCCAGGTGTGAGAG...CATGGCTTGACATAGAGGGTTAGAGAAGTGGGGTGACCACACTTTGAGCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR GCA 72 bp | ACCTCATCTCAGCTGAGGTTCAAGGACCAGCTCCCTTaGCCAAGAATGCTGCAGGTGTCCCTGGGATACTCA | + |
|
Preference number: 3 (lower is better) Translates to: TSSQLRFKDQLP*PRMLQVSLGYS Trigger: TGAGTATCCCAGGGACACCTGCAGCATTCTTGGGCAAGGGAGCTGGTCCTTGAACCTCAGCTGAGATGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR GCA 72 bp | TTCTCTCAGCTCCCACCTAGGCAGAACGCCACTGTCTaGAGGGCCTGCTCTGACCCAGGAAACACATTCATA | + |
|
Preference number: 3 (lower is better) Translates to: FSQLPPRQNATV*RACSDPGNTFI Trigger: TATGAATGTGTTTCCTGGGTCAGAGCAGGCCCTGCAGACAGTGGCGTTCTGCCTAGGTGGGAGCTGAGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR CCA 72 bp | CAAGAACAAGGGAGGCAGACGTCCTTCAGGTCTGGGTaGGAAGGCTGCCCTACGTTTTTCTGTCCTCCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: QEQGRQTSFRSG*EGCPTFFCPPS Trigger: ACTTGGAGGACAGAAAAACGTAGGGCAGCCTTCCCACCCAGACCTGAAGGACGTCTGCCTCCCTTGTTCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR CCA 72 bp | CTGCCTGGCTCTCATTTGCAAGTCAAAACTTCTTCCTaGAGGCGGCCAGCTCAGATTCCTACCCACAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LPGSHLQVKTSS*RRPAQIPTHSW Trigger: CCAGCTGTGGGTAGGAATCTGAGCTGGCCGCCTCCAGGAAGAAGTTTTGACTTGCAAATGAGAGCCAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCTGTCCTTACCCACTGCTACAGAGTTGGGGCTTaGGAGCCGATGTCCTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SWLLYYSPPQSLSVLTHCYRVGA*EPMSSD Trigger: GTCTGAGGACATCGGCTCCAAAGCCCCAACTCTGTA...GCAGTGGGTAAGGACAGACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR TCA 72 bp | AGCACCCACCTTCTCATTTCCCCTTCTACACACACCTaGGACATCTGTCCAGTGCTAACAACCCACCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: STHLLISPSTHT*DICPVLTTHPS Trigger: GCTGGGGTGGGTTGTTAGCACTGGACAGATGTCTCAGGTGTGTGTAGAAGGGGAAATGAGAAGGTGGGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR CCA 72 bp | CCTGGGATACTCATAGCCTCAGACTGGTTACAGAGTTaGGGCTTTGGAGCCGATGTCCTCAGACGCTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PGILIASDWLQS*GFGADVLRRSS Trigger: AGAAGAGCGTCTGAGGACATCGGCTCCAAAGCCCCAACTCTGTAACCAGTCTGAGGCTATGAGTATCCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR CCA 72 bp | ACCAGCTCCCTTGCCCAAGAATGCTGCAGGTGTCCCTaGGATACTCATAGCCTCAGACTGGTTACAGAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: TSSLAQECCRCP*DTHSLRLVTEL Trigger: CAACTCTGTAACCAGTCTGAGGCTATGAGTATCCCAGGGACACCTGCAGCATTCTTGGGCAAGGGAGCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR CCA 72 bp | TACTCTGATACCCACAACCCCCTGCTCAACTGTGCCTaGGTTCTAGAGTCAAGGACAAGCGAGGTAGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: YSDTHNPLLNCA*VLESRTSEVAT Trigger: TGTGGCTACCTCGCTTGTCCTTGACTCTAGAACCCAGGCACAGTTGAGCAGGGGGTTGTGGGTATCAGAGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR CCA 72 bp | TCCTGGAGGCGGCCAGCTCAGATTCCTACCCACAGCTaGAGTTGTGTGCTCAGGTGTAACCCAAAGATTACA | + |
|
Preference number: 3 (lower is better) Translates to: SWRRPAQIPTHS*SCVLRCNPKIT Trigger: TGTAATCTTTGGGTTACACCTGAGCACACAACTCCAGCTGTGGGTAGGAATCTGAGCTGGCCGCCTCCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGGCTCAAAGTGTGGTCACCCCACTTCTCTAACCCTCTATGTCAAGCCATGCTTGGTCCTGCACCTTaGAGTCCCCACCTCATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RGLKVWSPHFSNPLCQAMLGPAP*SPHLIS Trigger: TGAGATGAGGTGGGGACTCAAAGGTGCAGGACCAAG...CATGGCTTGACATAGAGGGTTAGAGAAGTGGGGTGACCACACTTTGAGCCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR TCA 72 bp | CAGGCCCCAGTGCCACACAAACCATGGGAACACCCGTaGCACAACACCGCTCTTCTTGAGGAGATAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QAPVPHKPWEHP*HNTALLEEIRK Trigger: TTTTCTTATCTCCTCAAGAAGAGCGGTGTTGTGTCACGGGTGTTCCCATGGTTTGTGTGGCACTGGGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR GCA 72 bp | AGAGGTCTTAAGGTAGGTTGCTGCCTGGCTCTCATTTaGAAGTCAAAACTTCTTCCTGGAGGCGGCCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RGLKVGCCLALI*KSKLLPGGGQL Trigger: GAGCTGGCCGCCTCCAGGAAGAAGTTTTGACTTGCAAATGAGAGCCAGGCAGCAACCTACCTTAAGACCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR CCA 72 bp | CAGTTCCAGTCCAAGGTTGTGGGAACATTTCAGTCTTaGTCCTGCACCTTTGAGTCCCCACCTCATCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: QFQSKVVGTFQS*SCTFESPPHLS Trigger: GCTGAGATGAGGTGGGGACTCAAAGGTGCAGGACCAAGACTGAAATGTTCCCACAACCTTGGACTGGAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGGGCTCAAAGTGTGGTCACCCCACTTCTCTAACCCTCTATGTCAAGCCATGAGACTGGTTACAGAGTaGGGGCTTTGGAGCCGATGT | + |
|
Preference number: 3 (lower is better) Translates to: RGLKVWSPHFSNPLCQAMRLVTE*GLWSRC Trigger: ACATCGGCTCCAAAGCCCCAACTCTGTAACCAGTCT...CATGGCTTGACATAGAGGGTTAGAGAAGTGGGGTGACCACACTTTGAGCCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGATATCTTTCTCAGCGTATCCTCTTTCCCAGTGACAGAAAAATCCCAGCCCCAAGGACCAGCTCCCTaGCCCAAGAATGCTGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: EDIFLSVSSFPVTEKSQPQGPAP*PKNAAG Trigger: ACCTGCAGCATTCTTGGGCAAGGGAGCTGGTCCTTG...GGGCTGGGATTTTTCTGTCACTGGGAAAGAGGATACGCTGAGAAAGATATCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CAA 90 bp | TACCAAACCCACATCCACATTCTGATGTCTGAGCACCCACCTTCTCATTTCCCCAGACTGGTTACAGAGTaGGGGCTTTGGAGCCGATGT | + |
|
Preference number: 3 (lower is better) Translates to: YQTHIHILMSEHPPSHFPRLVTE*GLWSRC Trigger: ACATCGGCTCCAAAGCCCCAACTCTGTAACCAGTCT...GGGGAAATGAGAAGGTGGGTGCTCAGACATCAGAATGTGGATGTGGGTTTGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR TCA 72 bp | CCTTGTTCTAAGAGGACACAAAAGGACAGCATACTCTaGTACCCACAACCCCCTGCTCAACTGTGCCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: PCSKRTQKDSIL*YPQPPAQLCLG Trigger: ACCCAGGCACAGTTGAGCAGGGGGTTGTGGGTATCAGAGTATGCTGTCCTTTTGTGTCCTCTTAGAACAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCTGTCCTTACCCACTGCAGTTCCAGTCCAAGGTaGTGGGAACATTTCAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SWLLYYSPPQSLSVLTHCSSSPR*WEHFSL Trigger: AAGACTGAAATGTTCCCACAACCTTGGACTGGAACT...GCAGTGGGTAAGGACAGACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAAAAGCATTTCTGGGAGGATATCTTTCTCAGCGTATCCTCTTTCCCAGTGACGGCCAGCCACAGTCCTaGATGTGCTTCAGGACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SKAFLGGYLSQRILFPSDGQPQS*MCFRTV Trigger: GACAGTCCTGAAGCACATCAAGGACTGTGGCTGGCC...GTCACTGGGAAAGAGGATACGCTGAGAAAGATATCCTCCCAGAAATGCTTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR TCA 72 bp | CTCTCCCTACCAAACCCACATCCACATTCTGATGTCTaGGCACCCACCTTCTCATTTCCCCTTCTACACACA | + |
|
Preference number: 3 (lower is better) Translates to: LSLPNPHPHSDV*APTFSFPLLHT Trigger: TGTGTGTAGAAGGGGAAATGAGAAGGTGGGTGCTCAGACATCAGAATGTGGATGTGGGTTTGGTAGGGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTCAAGGACAAGCGAGGTAGCCACAAACCACAACCAAGACCAACTTCCCAGAGTTCCAGTCCAAGGTaGTGGGAACATTTCAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RVKDKRGSHKPQPRPTSQSSSPR*WEHFSL Trigger: AAGACTGAAATGTTCCCACAACCTTGGACTGGAACT...CTGGGAAGTTGGTCTTGGTTGTGGTTTGTGGCTACCTCGCTTGTCCTTGACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR TCA 72 bp | ACCATGGGAACACCCGTGACACAACACCGCTCTTCTTaGGGAGATAAGAAAAGGTATGCCTACGCTTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: TMGTPVTQHRSS*GDKKRYAYASC Trigger: ACAAGAAGCGTAGGCATACCTTTTCTTATCTCCTCAAGAAGAGCGGTGTTGTGTCACGGGTGTTCCCATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR TCA 72 bp | GGTATTACTCTCCCTACCAAACCCACATCCACATTCTaGTGTCTGAGCACCCACCTTCTCATTTCCCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GITLPTKPTSTF*CLSTHLLISPS Trigger: AGAAGGGGAAATGAGAAGGTGGGTGCTCAGACATCAGAATGTGGATGTGGGTTTGGTAGGGAGAGTAATACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR GCA 72 bp | GAAACACATTCATACTTGCAGAGGCACAGGCCACTCTaGCAACTTTCAGCACGAACAGATCATCTACGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ETHSYLQRHRPL*QLSARTDHLRV Trigger: CACTCGTAGATGATCTGTTCGTGCTGAAAGTTGGCAGAGTGGCCTGTGCCTCTGCAAGTATGAATGTGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR CCA 72 bp | TGGGAAGGCTGCCCTACGTTTTTCTGTCCTCCAAGTTaGTGGCCGAATGAATTTCAGTCAACAATTTTCACC | + |
|
Preference number: 3 (lower is better) Translates to: WEGCPTFFCPPS*WPNEFQSTIFT Trigger: GGTGAAAATTGTTGACTGAAATTCATTCGGCCACCAACTTGGAGGACAGAAAAACGTAGGGCAGCCTTCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR CCA 72 bp | AGTGGCAGGGAGGGATTCCACTTTCAAAAGCATTTCTaGGAGGATATCTTTCTCAGCGTATCCTCTTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SGREGFHFQKHF*EDIFLSVSSFP Trigger: TGGGAAAGAGGATACGCTGAGAAAGATATCCTCCCAGAAATGCTTTTGAAAGTGGAATCCCTCCCTGCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR CCA 72 bp | TCTGCCAACTTTCAGCACGAACAGATCATCTACGAGTaGCAGGGAGGGATTCCACTTTCAAAAGCATTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SANFQHEQIIYE*QGGIPLSKAFL Trigger: CAGAAATGCTTTTGAAAGTGGAATCCCTCCCTGCCACTCGTAGATGATCTGTTCGTGCTGAAAGTTGGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCAGGGGTAGACAAGATAGAAGGGTGTTATAACAGAGTAAGGTCAAGAATATACAGAGTTGGGGCTTaGGAGCCGATGTCCTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: FPGVDKIEGCYNRVRSRIYRVGA*EPMSSD Trigger: GTCTGAGGACATCGGCTCCAAAGCCCCAACTCTGTA...TATTCTTGACCTTACTCTGTTATAACACCCTTCTATCTTGTCTACCCCTGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGAATAAAGCAGACATTAGGTGTCTTCCTGCAATCCTTCCTCTGAAGCACCCCAGTTCCAGTCCAAGGTaGTGGGAACATTTCAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: KNKADIRCLPAILPLKHPSSSPR*WEHFSL Trigger: AAGACTGAAATGTTCCCACAACCTTGGACTGGAACT...GGGGTGCTTCAGAGGAAGGATTGCAGGAAGACACCTAATGTCTGCTTTATTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR GCA 72 bp | TCCCAATACACTGGAAGAGGTCTTAAGGTAGGTTGCTaGCTGGCTCTCATTTGCAAGTCAAAACTTCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SQYTGRGLKVGC*LALICKSKLLP Trigger: AGGAAGAAGTTTTGACTTGCAAATGAGAGCCAGGCAGCAACCTACCTTAAGACCTCTTCCAGTGTATTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR GCA 72 bp | ATCTCCCAATACACTGGAAGAGGTCTTAAGGTAGGTTaGTGCCTGGCTCTCATTTGCAAGTCAAAACTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: ISQYTGRGLKVG*CLALICKSKLL Trigger: AAGAAGTTTTGACTTGCAAATGAGAGCCAGGCAGCAACCTACCTTAAGACCTCTTCCAGTGTATTGGGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR GCA 90 bp | AGGCGGGCTGTGGAACACCGAGGGACTGTGGTGACAGACATGGCCAGGCCAGCCCACATCAGGGCTACCTaGCCGCTCGCCGTTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRAVEHRGTVVTDMARPAHIRAT*PLAVFS Trigger: GCTGAAAACGGCGAGCGGGCAGGTAGCCCTGATGTG...GGCTGGCCTGGCCATGTCTGTCACCACAGTCCCTCGGTGTTCCACAGCCCGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR CCA 90 bp | AGGCGGGCTGTGGAACACCGAGGGACTGTGGTGACAGACATGGCCAGGCCAGCCGCCCTTCAGAAGTCTTaGACTGGCATCCTTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RRAVEHRGTVVTDMARPAALQKS*TGILGT Trigger: TGTGCCAAGGATGCCAGTCCAAGACTTCTGAAGGGC...GGCTGGCCTGGCCATGTCTGTCACCACAGTCCCTCGGTGTTCCACAGCCCGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR CCA 90 bp | AGGCGGGCTGTGGAACACCGAGGGACTGTGGTGACAGACATGGCCAGGCCAGCCTCAGAAGTCTTGGACTaGCATCCTTGGCACATCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RRAVEHRGTVVTDMARPASEVLD*HPWHIR Trigger: ACGGATGTGCCAAGGATGCCAGTCCAAGACTTCTGA...GGCTGGCCTGGCCATGTCTGTCACCACAGTCCCTCGGTGTTCCACAGCCCGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCCCAGGCTCTTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCTGTCCCACATCAGGGCTACCTaGCCGCTCGCCGTTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAQALGCCITLHPRACLSHIRAT*PLAVFS Trigger: GCTGAAAACGGCGAGCGGGCAGGTAGCCCTGATGTG...GGACAGACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGAGCCTGGGCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR CAA 72 bp | TCCCCCAGGGTAGAGATGTGGCTTCTGCCCAGGCTCTaGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPRVEMWLLPRL*AVVLLSTPEPV Trigger: GACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGAGCCTGGGCAGAAGCCACATCTCTACCCTGGGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR TCA 90 bp | GAACAAGGGAGGCAGACGTCCTTCAGGTCTGGGTGGGAAGGCTGCCCTACGTTTTTAGGACGTGCCTCTTaGGGTGGTAACTGCTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: EQGRQTSFRSGWEGCPTFLGRAS*GGNCSE Trigger: TTCGGAGCAGTTACCACCTCAAGAGGCACGTCCTAA...AAACGTAGGGCAGCCTTCCCACCCAGACCTGAAGGACGTCTGCCTCCCTTGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118729.8 ENSMUST00000119800.8 |
||
| CDS-3UTR GCA 90 bp | GAACAAGGGAGGCAGACGTCCTTCAGGTCTGGGTGGGAAGGCTGCCCTACGTTTCGTTTTCAGCCTGCTTaGTGGCAATCTGGCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EQGRQTSFRSGWEGCPTFRFQPA*WQSGSA Trigger: TGCTGAGCCAGATTGCCAGCAAGCAGGCTGAAAACG...AAACGTAGGGCAGCCTTCCCACCCAGACCTGAAGGACGTCTGCCTCCCTTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAGTGGTGGTGGGACCGTCAGAACACAGGGCTATGCTCTTCCAGAGACTCTTCGCCGTTTTCAGCCTaGTTGCTGGCAATCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: REWWWDRQNTGLCSSRDSSPFSA*LLAIWL Trigger: GAGCCAGATTGCCAGCAAGCAGGCTGAAAACGGCGA...AGAGTCTCTGGAAGAGCATAGCCCTGTGTTCTGACGGTCCCACCACCACTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR GCA 90 bp | ATGGGCTACGGAACCCAAGTCCTCCACAAGGCACTTGAGCTGATCCCATCAGGCTCGCCGTTTTCAGCCTaGTTGCTGGCAATCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: MGYGTQVLHKALELIPSGSPFSA*LLAIWL Trigger: GAGCCAGATTGCCAGCAAGCAGGCTGAAAACGGCGA...GCCTGATGGGATCAGCTCAAGTGCCTTGTGGAGGACTTGGGTTCCGTAGCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR CCA 90 bp | GCTGTCTGTGCATTCCCCCAGGGTAGAGATGTGGCTTCTGCCCAGGCTCTTGGCTTGGACTGGCATCCTTaGCACATCCGTTTGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AVCAFPQGRDVASAQALGLDWHP*HIRLCL Trigger: CAGACACAAACGGATGTGCCAAGGATGCCAGTCCAA...GCCAAGAGCCTGGGCAGAAGCCACATCTCTACCCTGGGGGAATGCACAGACAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR CAA 72 bp | CACCTCATCTCAGCTGAGGTTCAAGGACCAGCTCCCTaGCCCAAGAATGCTGCAGGTGTCCCTGGGATACTC | + |
|
Preference number: 4 (lower is better) Translates to: HLISAEVQGPAP*PKNAAGVPGIL Trigger: GAGTATCCCAGGGACACCTGCAGCATTCTTGGGCAAGGGAGCTGGTCCTTGAACCTCAGCTGAGATGAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAGTGGTGGTGGGACCGTCAGAACACAGGGCTATGCTCTTCCAGAGACTCTTTAGGACGTGCCTCTTaGGGTGGTAACTGCTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: REWWWDRQNTGLCSSRDSLGRAS*GGNCSE Trigger: TTCGGAGCAGTTACCACCTCAAGAGGCACGTCCTAA...AGAGTCTCTGGAAGAGCATAGCCCTGTGTTCTGACGGTCCCACCACCACTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118729.8 ENSMUST00000119800.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGGCTCAAAGTGTGGTCACCCCACTTCTCTAACCCTCTATGTCAAGCCATGCACATCAGGGCTACCTaGCCGCTCGCCGTTTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGLKVWSPHFSNPLCQAMHIRAT*PLAVFS Trigger: GCTGAAAACGGCGAGCGGGCAGGTAGCCCTGATGTG...CATGGCTTGACATAGAGGGTTAGAGAAGTGGGGTGACCACACTTTGAGCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR CCA 90 bp | GAACAAGGGAGGCAGACGTCCTTCAGGTCTGGGTGGGAAGGCTGCCCTACGTTTTACAGTCCATCTGACTaGAGCACCTCAGCACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: EQGRQTSFRSGWEGCPTFYSPSD*STSAHQ Trigger: CTGATGTGCTGAGGTGCTCCAGTCAGATGGACTGTA...AAACGTAGGGCAGCCTTCCCACCCAGACCTGAAGGACGTCTGCCTCCCTTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR CAA 72 bp | CCCTGGGATACTCATAGCCTCAGACTGGTTACAGAGTaGGGGCTTTGGAGCCGATGTCCTCAGACGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PWDTHSLRLVTE*GLWSRCPQTLF Trigger: GAAGAGCGTCTGAGGACATCGGCTCCAAAGCCCCAACTCTGTAACCAGTCTGAGGCTATGAGTATCCCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| 3UTR CAA 72 bp | GAAGACCAGACCAGACCAGACCTCCATCTCCTCTACTaGAACAGGCAGAGGATTCTGACAGGGAGAGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EDQTRPDLHLLY*NRQRILTGRGL Trigger: GAGCCCTCTCCCTGTCAGAATCCTCTGCCTGTTCAAGTAGAGGAGATGGAGGTCTGGTCTGGTCTGGTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR GCA 90 bp | GATACCCACAACCCCCTGCTCAACTGTGCCTGGGTTCTAGAGTCAAGGACAAGCCGTTTTCAGCCTGCTTaGTGGCAATCTGGCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DTHNPLLNCAWVLESRTSRFQPA*WQSGSA Trigger: TGCTGAGCCAGATTGCCAGCAAGCAGGCTGAAAACG...GCTTGTCCTTGACTCTAGAACCCAGGCACAGTTGAGCAGGGGGTTGTGGGTATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR GCA 90 bp | AGCTGCCAGCCCCCTTCCTATTTGCTTTCAAATAGGCGGGCTGTGGAACACCGACGTTTTCAGCCTGCTTaGTGGCAATCTGGCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SCQPPSYLLSNRRAVEHRRFQPA*WQSGSA Trigger: TGCTGAGCCAGATTGCCAGCAAGCAGGCTGAAAACG...TCGGTGTTCCACAGCCCGCCTATTTGAAAGCAAATAGGAAGGGGGCTGGCAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR CCA 90 bp | GCTCAGGAGCCTTTGCAGCTGTCTGTGCATTCCCCCAGGGTAGAGATGTGGCTTTTTCAGCCTGCTTGCTaGCAATCTGGCTCAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: AQEPLQLSVHSPRVEMWLFQPAC*QSGSAS Trigger: TGATGCTGAGCCAGATTGCCAGCAAGCAGGCTGAAA...AAGCCACATCTCTACCCTGGGGGAATGCACAGACAGCTGCAAAGGCTCCTGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGCTCAAAGTGTGGTCACCCCACTTCTCTAACCCTCTATGTCAAGCCATGTTCGGTGGCCCTGACTaGAGCACCTCAGCACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGLKVWSPHFSNPLCQAMFGGPD*STSAHQ Trigger: CTGATGTGCTGAGGTGCTCCAGTCAGGGCCACCGAA...CATGGCTTGACATAGAGGGTTAGAGAAGTGGGGTGACCACACTTTGAGCCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118729.8 |
||
| CDS-3UTR CCA 90 bp | TTCAAGGACCAGCTCCCTTGCCCAAGAATGCTGCAGGTGTCCCTGGGATACTCAGCCCTTCAGAAGTCTTaGACTGGCATCCTTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: FKDQLPCPRMLQVSLGYSALQKS*TGILGT Trigger: TGTGCCAAGGATGCCAGTCCAAGACTTCTGAAGGGC...TGAGTATCCCAGGGACACCTGCAGCATTCTTGGGCAAGGGAGCTGGTCCTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR TCA 90 bp | CAAGAACAAGGGAGGCAGACGTCCTTCAGGTCTGGGTGGGAAGGCTGCCCTACGGATGGTACTTCTGGATaGAACGCATATCACAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: QEQGRQTSFRSGWEGCPTDGTSG*NAYHRH Trigger: ATGTCTGTGATATGCGTTTCATCCAGAAGTACCATC...CGTAGGGCAGCCTTCCCACCCAGACCTGAAGGACGTCTGCCTCCCTTGTTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR TCA 90 bp | GATACCCACAACCCCCTGCTCAACTGTGCCTGGGTTCTAGAGTCAAGGACAAGCACATCCGTTTGTGTCTaGGTAATCGGTCTGTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: DTHNPLLNCAWVLESRTSTSVCV*VIGLSE Trigger: CTCGGACAGACCGATTACTCAGACACAAACGGATGT...GCTTGTCCTTGACTCTAGAACCCAGGCACAGTTGAGCAGGGGGTTGTGGGTATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR CCA 90 bp | GTAGGCCTCAGGGGTCCTGGAGTGCTCAATGAAACCCCAAGGTCTCCCTTAAGATCAGAAGTCTTGGACTaGCATCCTTGGCACATCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VGLRGPGVLNETPRSPLRSEVLD*HPWHIR Trigger: ACGGATGTGCCAAGGATGCCAGTCCAAGACTTCTGA...TCTTAAGGGAGACCTTGGGGTTTCATTGAGCACTCCAGGACCCCTGAGGCCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR CCA 90 bp | CTCATCTCAGCTGAGGTTCAAGGACCAGCTCCCTTGCCCAAGAATGCTGCAGGTTCAGAAGTCTTGGACTaGCATCCTTGGCACATCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LISAEVQGPAPLPKNAAGSEVLD*HPWHIR Trigger: ACGGATGTGCCAAGGATGCCAGTCCAAGACTTCTGA...ACCTGCAGCATTCTTGGGCAAGGGAGCTGGTCCTTGAACCTCAGCTGAGATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR TCA 90 bp | TACCAAACCCACATCCACATTCTGATGTCTGAGCACCCACCTTCTCATTTCCCCGGCTTACAGTCCATCTaGCTGGAGCACCTCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: YQTHIHILMSEHPPSHFPGLQSI*LEHLST Trigger: TGTGCTGAGGTGCTCCAGTCAGATGGACTGTAAGCC...GGGGAAATGAGAAGGTGGGTGCTCAGACATCAGAATGTGGATGTGGGTTTGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAGTGGTGGTGGGACCGTCAGAACACAGGGCTATGCTCTTCCAGAGACTCTCATCCTCTTTGCGGTTaGGGGATTTATCACTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: REWWWDRQNTGLCSSRDSHPLCG*GIYHCL Trigger: AAGACAGTGATAAATCCCGCAACCGCAAAGAGGATG...AGAGTCTCTGGAAGAGCATAGCCCTGTGTTCTGACGGTCCCACCACCACTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGCAGGTGTCCCTGGGATACTCATAGCCTCAGACTGGTTACAGAGTTGGGGTTGTGGCGTTCGAGATaGTACTTCTGGATGAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: CCRCPWDTHSLRLVTELGLWRSR*YFWMKR Trigger: GCGTTTCATCCAGAAGTACCATCTCGAACGCCACAA...CCCCAACTCTGTAACCAGTCTGAGGCTATGAGTATCCCAGGGACACCTGCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR CCA 90 bp | GGACACAAAAGGACAGCATACTCTGATACCCACAACCCCCTGCTCAACTGTGCCTACAGTCCATCTGACTaGAGCACCTCAGCACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHKRTAYSDTHNPLLNCAYSPSD*STSAHQ Trigger: CTGATGTGCTGAGGTGCTCCAGTCAGATGGACTGTA...GGCACAGTTGAGCAGGGGGTTGTGGGTATCAGAGTATGCTGTCCTTTTGTGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR TCA 90 bp | TCTCAGCTGAGGTTCAAGGACCAGCTCCCTTGCCCAAGAATGCTGCAGGTGTCCTTTTCGGTGGCCCTTTaGAGACAAATCAAATCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SQLRFKDQLPCPRMLQVSFSVAL*RQIKSR Trigger: CCTAGATTTGATTTGTCTTCAAAGGGCCACCGAAAA...GGACACCTGCAGCATTCTTGGGCAAGGGAGCTGGTCCTTGAACCTCAGCTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR GCA 90 bp | CCTTCAGGTCTGGGTGGGAAGGCTGCCCTACGTTTTTCTGTCCTCCAAGTTGGTCATCCTCTTTGCGGTTaGGGGATTTATCACTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSGLGGKAALRFSVLQVGHPLCG*GIYHCL Trigger: AAGACAGTGATAAATCCCGCAACCGCAAAGAGGATG...ACCAACTTGGAGGACAGAAAAACGTAGGGCAGCCTTCCCACCCAGACCTGAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR GCA 90 bp | CTCATCTCAGCTGAGGTTCAAGGACCAGCTCCCTTGCCCAAGAATGCTGCAGGTGCCTATAGAGAAAACTaGCCTTCAGAAGTCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LISAEVQGPAPLPKNAAGAYREN*PSEVLD Trigger: GTCCAAGACTTCTGAAGGGCAGTTTTCTCTATAGGC...ACCTGCAGCATTCTTGGGCAAGGGAGCTGGTCCTTGAACCTCAGCTGAGATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119168.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCTACGCTTCTTGTCCAGCCCACGTCTGTCCTTCCCAGTTTCTCCTTTTGTTTGGACTGGCATCCTTaGCACATCCGTTTGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MPTLLVQPTSVLPSFSFCLDWHP*HIRLCL Trigger: CAGACACAAACGGATGTGCCAAGGATGCCAGTCCAA...ACAAAAGGAGAAACTGGGAAGGACAGACGTGGGCTGGACAAGAAGCGTAGGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR CCA 90 bp | GGTTCTAGAGTCAAGGACAAGCGAGGTAGCCACAAACCACAACCAAGACCAACTGCCCTTCAGAAGTCTTaGACTGGCATCCTTGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GSRVKDKRGSHKPQPRPTALQKS*TGILGT Trigger: TGTGCCAAGGATGCCAGTCCAAGACTTCTGAAGGGC...AGTTGGTCTTGGTTGTGGTTTGTGGCTACCTCGCTTGTCCTTGACTCTAGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGCAGGTGTCCCTGGGATACTCATAGCCTCAGACTGGTTACAGAGTTGGGGGATGGTACTTCTGGATaGAACGCATATCACAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: CCRCPWDTHSLRLVTELGDGTSG*NAYHRH Trigger: ATGTCTGTGATATGCGTTTCATCCAGAAGTACCATC...CCCCAACTCTGTAACCAGTCTGAGGCTATGAGTATCCCAGGGACACCTGCAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR TCA 90 bp | CTATCAGGAGGGAGCCAAGGTCGGTTCTCTGAGACTGAAGACCAGACCAGACCAGATGGTACTTCTGGATaGAACGCATATCACAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: LSGGSQGRFSETEDQTRPDGTSG*NAYHRH Trigger: ATGTCTGTGATATGCGTTTCATCCAGAAGTACCATC...TGGTCTGGTCTGGTCTTCAGTCTCAGAGAACCGACCTTGGCTCCCTCCTGATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR TCA 90 bp | GGTTCTAGAGTCAAGGACAAGCGAGGTAGCCACAAACCACAACCAAGACCAACTACATCCGTTTGTGTCTaGGTAATCGGTCTGTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSRVKDKRGSHKPQPRPTTSVCV*VIGLSE Trigger: CTCGGACAGACCGATTACTCAGACACAAACGGATGT...AGTTGGTCTTGGTTGTGGTTTGTGGCTACCTCGCTTGTCCTTGACTCTAGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR CCA 90 bp | TACCAAACCCACATCCACATTCTGATGTCTGAGCACCCACCTTCTCATTTCCCCTTGGACTGGCATCCTTaGCACATCCGTTTGTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YQTHIHILMSEHPPSHFPLDWHP*HIRLCL Trigger: CAGACACAAACGGATGTGCCAAGGATGCCAGTCCAA...GGGGAAATGAGAAGGTGGGTGCTCAGACATCAGAATGTGGATGTGGGTTTGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR CCA 90 bp | AGACGTCCTTCAGGTCTGGGTGGGAAGGCTGCCCTACGTTTTTCTGTCCTCCAATCACTGTCTTTTCGGTaGCCCTTTGAAGACAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: RRPSGLGGKAALRFSVLQSLSFR*PFEDKS Trigger: TGATTTGTCTTCAAAGGGCCACCGAAAAGACAGTGA...TTGGAGGACAGAAAAACGTAGGGCAGCCTTCCCACCCAGACCTGAAGGACGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR TCA 90 bp | TTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCTGTCCTTACCCACTGCCATTTTCGGTGGCCCTTTaGAGACAAATCAAATCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAVVLLSTPEPVCPYPLPFSVAL*RQIKSR Trigger: CCTAGATTTGATTTGTCTTCAAAGGGCCACCGAAAA...TGGCAGTGGGTAAGGACAGACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGGCTCAAAGTGTGGTCACCCCACTTCTCTAACCCTCTATGTCAAGCCATGCATCCTCTTTGCGGTTaGGGGATTTATCACTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGLKVWSPHFSNPLCQAMHPLCG*GIYHCL Trigger: AAGACAGTGATAAATCCCGCAACCGCAAAGAGGATG...CATGGCTTGACATAGAGGGTTAGAGAAGTGGGGTGACCACACTTTGAGCCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCTGTCCTTACCCACTGCCATCACTGTCTTTTCGGTaGCCCTTTGAAGACAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: LAVVLLSTPEPVCPYPLPSLSFR*PFEDKS Trigger: TGATTTGTCTTCAAAGGGCCACCGAAAAGACAGTGA...TGGCAGTGGGTAAGGACAGACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR CCA 90 bp | AAGAATAAAGCAGACATTAGGTGTCTTCCTGCAATCCTTCCTCTGAAGCACCCCTTTCAGCCTGCTTGCTaGCAATCTGGCTCAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KNKADIRCLPAILPLKHPFQPAC*QSGSAS Trigger: TGATGCTGAGCCAGATTGCCAGCAAGCAGGCTGAAA...GGGGTGCTTCAGAGGAAGGATTGCAGGAAGACACCTAATGTCTGCTTTATTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR CCA 90 bp | AAGAATAAAGCAGACATTAGGTGTCTTCCTGCAATCCTTCCTCTGAAGCACCCCGGTTTCTCACCAGTGTaGATTAGGACGTGCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KNKADIRCLPAILPLKHPGFSPV*IRTCLL Trigger: CAAGAGGCACGTCCTAATCCACACTGGTGAGAAACC...GGGGTGCTTCAGAGGAAGGATTGCAGGAAGACACCTAATGTCTGCTTTATTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118729.8 ENSMUST00000119800.8 |
||
| CDS-3UTR CCA 90 bp | GAGGATATCTTTCTCAGCGTATCCTCTTTCCCAGTGACAGAAAAATCCCAGCCCTTGTGGCGTTCGAGATaGTACTTCTGGATGAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: EDIFLSVSSFPVTEKSQPLWRSR*YFWMKR Trigger: GCGTTTCATCCAGAAGTACCATCTCGAACGCCACAA...GGGCTGGGATTTTTCTGTCACTGGGAAAGAGGATACGCTGAGAAAGATATCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR CCA 90 bp | CGTCCTTCAGGTCTGGGTGGGAAGGCTGCCCTACGTTTTTCTGTCCTCCAAGTTGACATCACACTCAAATaGTTTCTCACCTTTTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: RPSGLGGKAALRFSVLQVDITLK*FLTFLT Trigger: TGTTAAAAAGGTGAGAAACCATTTGAGTGTGATGTC...AACTTGGAGGACAGAAAAACGTAGGGCAGCCTTCCCACCCAGACCTGAAGGACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000119168.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCAGGGGTAGACAAGATAGAAGGGTGTTATAACAGAGTAAGGTCAAGAATAGGCTTACAGTCCATCTaGCTGGAGCACCTCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: FPGVDKIEGCYNRVRSRIGLQSI*LEHLST Trigger: TGTGCTGAGGTGCTCCAGTCAGATGGACTGTAAGCC...TATTCTTGACCTTACTCTGTTATAACACCCTTCTATCTTGTCTACCCCTGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR CCA 90 bp | TCAAAAGCATTTCTGGGAGGATATCTTTCTCAGCGTATCCTCTTTCCCAGTGACTTGTGGCGTTCGAGATaGTACTTCTGGATGAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: SKAFLGGYLSQRILFPSDLWRSR*YFWMKR Trigger: GCGTTTCATCCAGAAGTACCATCTCGAACGCCACAA...GTCACTGGGAAAGAGGATACGCTGAGAAAGATATCCTCCCAGAAATGCTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCAGGGGTAGACAAGATAGAAGGGTGTTATAACAGAGTAAGGTCAAGAATATTTCAGCCTGCTTGCTaGCAATCTGGCTCAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: FPGVDKIEGCYNRVRSRIFQPAC*QSGSAS Trigger: TGATGCTGAGCCAGATTGCCAGCAAGCAGGCTGAAA...TATTCTTGACCTTACTCTGTTATAACACCCTTCTATCTTGTCTACCCCTGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS GCA 90 bp | TTTTCGGTGGCCCTGACTGGAGCACCTCAGCACATCAGGGCTACCTaGCCGCTCGCCGTTTTCAGCCTGCTTGCTGGCAATCTGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FSVALTGAPQHIRAT*PLAVFSLLAGNLAQ Trigger: CTGAGCCAGATTGCCAGCAAGCAGGCTGAAAACGGCGAGCGGGCAGGTAGCCCTGATGTGCTGAGGTGCTCCAGTCAGGGCCACCGAAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118729.8 ENSMUST00000229886.2 |
||
| CDS GCA 90 bp | CTTACAGTCCATCTGACTGGAGCACCTCAGCACATCAGGGCTACCTaGCCGCTCGCCGTTTTCAGCCTGCTTGCTGGCAATCTGGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LTVHLTGAPQHIRAT*PLAVFSLLAGNLAQ Trigger: CTGAGCCAGATTGCCAGCAAGCAGGCTGAAAACGGCGAGCGGGCAGGTAGCCCTGATGTGCTGAGGTGCTCCAGTCAGATGGACTGTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000119168.8 ENSMUST00000119800.8 ENSMUST00000133986.2 ENSMUST00000139960.8 ENSMUST00000141465.9 |
||
| CDS GCA 90 bp | TCAGCACATCAGGGCTACCTGCCCGCTCGCCGTTTTCAGCCTGCTTaGTGGCAATCTGGCTCAGCATCATCTTCTTGCTGGCTGCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SAHQGYLPARRFQPA*WQSGSASSSCWLQW Trigger: CCACTGCAGCCAGCAAGAAGATGATGCTGAGCCAGATTGCCAGCAAGCAGGCTGAAAACGGCGAGCGGGCAGGTAGCCCTGATGTGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141465.9 |
||
| CDS CCA 90 bp | GGGCTACCTGCCCGCTCGCCGTTTTCAGCCTGCTTGCTGGCAATCTaGCTCAGCATCATCTTCTTGCTGGCTGCAGTGGGAACCAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: GLPARSPFSACLLAI*LSIIFLLAAVGTKL Trigger: GAGTTTGGTTCCCACTGCAGCCAGCAAGAAGATGATGCTGAGCCAGATTGCCAGCAAGCAGGCTGAAAACGGCGAGCGGGCAGGTAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141465.9 |
||
| CDS CCA 90 bp | GCACATCAGGGCTACCTGCCCGCTCGCCGTTTTCAGCCTGCTTGCTaGCAATCTGGCTCAGCATCATCTTCTTGCTGGCTGCAGTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AHQGYLPARRFQPAC*QSGSASSSCWLQWE Trigger: TTCCCACTGCAGCCAGCAAGAAGATGATGCTGAGCCAGATTGCCAGCAAGCAGGCTGAAAACGGCGAGCGGGCAGGTAGCCCTGATGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141465.9 |
||
| CDS-3UTR CAA 90 bp | GAAGTAGGCCTCAGGGGTCCTGGAGTGCTCAATGAAACCCCAAGGTCTCCCTTACCGTTTTCAGCCTGCTaGCTGGCAATCTGGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EVGLRGPGVLNETPRSPLPFSAC*LAIWLS Trigger: GCTGAGCCAGATTGCCAGCAAGCAGGCTGAAAACGG...TAAGGGAGACCTTGGGGTTTCATTGAGCACTCCAGGACCCCTGAGGCCTACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR CAA 90 bp | TTCAAGGACCAGCTCCCTTGCCCAAGAATGCTGCAGGTGTCCCTGGGATACTCACCGTTTTCAGCCTGCTaGCTGGCAATCTGGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FKDQLPCPRMLQVSLGYSPFSAC*LAIWLS Trigger: GCTGAGCCAGATTGCCAGCAAGCAGGCTGAAAACGG...TGAGTATCCCAGGGACACCTGCAGCATTCTTGGGCAAGGGAGCTGGTCCTTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS-3UTR CAA 90 bp | CTCACACCTGGCCTTGGCAGTGTGGTTCTGGGTGGGCTGTCTGTACACATCCAGCTTGGACTGGCATCCTaGGCACATCCGTTTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LTPGLGSVVLGGLSVHIQLGLAS*AHPFVS Trigger: AGACACAAACGGATGTGCCAAGGATGCCAGTCCAAG...CTGGATGTGTACAGACAGCCCACCCAGAACCACACTGCCAAGGCCAGGTGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
||
| CDS GCA 90 bp | CGTTTTCAGCCTGCTTGCTGGCAATCTGGCTCAGCATCATCTTCTTaGTGGCTGCAGTGGGAACCAAACTCACACCTGCTAGGCCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RFQPACWQSGSASSS*WLQWEPNSHLLGLH Trigger: GTGAAGGCCTAGCAGGTGTGAGTTTGGTTCCCACTGCAGCCAGCAAGAAGATGATGCTGAGCCAGATTGCCAGCAAGCAGGCTGAAAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141465.9 |
||
| CDS CCA 90 bp | GCTTGCTGGCAATCTGGCTCAGCATCATCTTCTTGCTGGCTGCAGTaGGAACCAAACTCACACCTGCTAGGCCTTCACAAGCCAGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: ACWQSGSASSSCWLQ*EPNSHLLGLHKPED Trigger: GTCTTCTGGCTTGTGAAGGCCTAGCAGGTGTGAGTTTGGTTCCCACTGCAGCCAGCAAGAAGATGATGCTGAGCCAGATTGCCAGCAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141465.9 |
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| CDS-3UTR CAA 90 bp | GGGACCGTCAGAACACAGGGCTATGCTCTTCCAGAGACTCTCCTCAGCACTCCCTCATCCTCTTTGCGGTaGCGGGATTTATCACTGTCT | + |
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Preference number: 5 (lower is better) Translates to: GTVRTQGYALPETLLSTPSSSLR*RDLSLS Trigger: AGACAGTGATAAATCCCGCAACCGCAAAGAGGATGA...GGGAGTGCTGAGGAGAGTCTCTGGAAGAGCATAGCCCTGTGTTCTGACGGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| CDS CCA 90 bp | TTTCAGCCTGCTTGCTGGCAATCTGGCTCAGCATCATCTTCTTGCTaGCTGCAGTGGGAACCAAACTCACACCTGCTAGGCCTTCACAAG | + |
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Preference number: 5 (lower is better) Translates to: FQPACWQSGSASSSC*LQWEPNSHLLGLHK Trigger: CTTGTGAAGGCCTAGCAGGTGTGAGTTTGGTTCCCACTGCAGCCAGCAAGAAGATGATGCTGAGCCAGATTGCCAGCAAGCAGGCTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141465.9 |
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| CDS-3UTR CAA 90 bp | GGAGCCAAGGTCGGTTCTCTGAGACTGAAGACCAGACCAGACCAGACCTCCATCTCATCCTCTTTGCGGTaGCGGGATTTATCACTGTCT | + |
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Preference number: 5 (lower is better) Translates to: GAKVGSLRLKTRPDQTSISSSLR*RDLSLS Trigger: AGACAGTGATAAATCCCGCAACCGCAAAGAGGATGA...GATGGAGGTCTGGTCTGGTCTGGTCTTCAGTCTCAGAGAACCGACCTTGGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| CDS-3UTR CAA 90 bp | ATGGGCTACGGAACCCAAGTCCTCCACAAGGCACTTGAGCTGATCCCATCAGGCAAGCTGTCATCCTCTTaGCGGTTGCGGGATTTATCA | + |
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Preference number: 5 (lower is better) Translates to: MGYGTQVLHKALELIPSGKLSSS*RLRDLS Trigger: TGATAAATCCCGCAACCGCAAAGAGGATGACAGCTT...GCCTGATGGGATCAGCTCAAGTGCCTTGTGGAGGACTTGGGTTCCGTAGCCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| CDS-3UTR CAA 90 bp | AGACGTCCTTCAGGTCTGGGTGGGAAGGCTGCCCTACGTTTTTCTGTCCTCCAACCTTGGCACATCCGTTaGTGTCTGAGTAATCGGTCT | + |
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Preference number: 5 (lower is better) Translates to: RRPSGLGGKAALRFSVLQPWHIR*CLSNRS Trigger: AGACCGATTACTCAGACACAAACGGATGTGCCAAGG...TTGGAGGACAGAAAAACGTAGGGCAGCCTTCCCACCCAGACCTGAAGGACGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| CDS-3UTR CAA 90 bp | TCTTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCTGTCCTTACCCACTGCCTTGGACTGGCATCCTaGGCACATCCGTTTGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: SWLLYYSPPQSLSVLTHCLGLAS*AHPFVS Trigger: AGACACAAACGGATGTGCCAAGGATGCCAGTCCAAG...GCAGTGGGTAAGGACAGACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| CDS-3UTR CAA 90 bp | TTGGCTGTTGTATTACTCTCCACCCCAGAGCCTGTCTGTCCTTACCCACTGCCACCTTGGCACATCCGTTaGTGTCTGAGTAATCGGTCT | + |
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Preference number: 5 (lower is better) Translates to: LAVVLLSTPEPVCPYPLPPWHIR*CLSNRS Trigger: AGACCGATTACTCAGACACAAACGGATGTGCCAAGG...TGGCAGTGGGTAAGGACAGACAGGCTCTGGGGTGGAGAGTAATACAACAGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| CDS-3UTR CAA 90 bp | CTGCCAACTTTCAGCACGAACAGATCATCTACGAGTGGCAGGGAGGGATTCCACCCTTGGCACATCCGTTaGTGTCTGAGTAATCGGTCT | + |
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Preference number: 5 (lower is better) Translates to: LPTFSTNRSSTSGREGFHPWHIR*CLSNRS Trigger: AGACCGATTACTCAGACACAAACGGATGTGCCAAGG...GTGGAATCCCTCCCTGCCACTCGTAGATGATCTGTTCGTGCTGAAAGTTGGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| CDS-3UTR CAA 90 bp | TACCAAACCCACATCCACATTCTGATGTCTGAGCACCCACCTTCTCATTTCCCCCTTGGACTGGCATCCTaGGCACATCCGTTTGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: YQTHIHILMSEHPPSHFPLGLAS*AHPFVS Trigger: AGACACAAACGGATGTGCCAAGGATGCCAGTCCAAG...GGGGAAATGAGAAGGTGGGTGCTCAGACATCAGAATGTGGATGTGGGTTTGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| CDS-3UTR CAA 90 bp | GGTTCTAGAGTCAAGGACAAGCGAGGTAGCCACAAACCACAACCAAGACCAACTAAGCTGTCATCCTCTTaGCGGTTGCGGGATTTATCA | + |
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Preference number: 5 (lower is better) Translates to: GSRVKDKRGSHKPQPRPTKLSSS*RLRDLS Trigger: TGATAAATCCCGCAACCGCAAAGAGGATGACAGCTT...AGTTGGTCTTGGTTGTGGTTTGTGGCTACCTCGCTTGTCCTTGACTCTAGAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| CDS-3UTR CAA 90 bp | TGCCTGGCTCTCATTTGCAAGTCAAAACTTCTTCCTGGAGGCGGCCAGCTCAGATTGAAAAGAGCCATTTaGTTCCACTACCACCACCTT | + |
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Preference number: 5 (lower is better) Translates to: CLALICKSKLLPGGGQLRLKRAI*FHYHHL Trigger: AAGGTGGTGGTAGTGGAACAAAATGGCTCTTTTCAA...TCTGAGCTGGCCGCCTCCAGGAAGAAGTTTTGACTTGCAAATGAGAGCCAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118729.8 ENSMUST00000119800.8 |
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| CDS TCA 90 bp | CTTCAGAAGTCTTGGACTGGCATCCTTGGCACATCCGTTTGTGTCTaGGTAATCGGTCTGTCCGAGAAAAACACTGATGACATCGTTCAC | + |
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Preference number: 5 (lower is better) Translates to: LQKSWTGILGTSVCV*VIGLSEKNTDDIVH Trigger: GTGAACGATGTCATCAGTGTTTTTCTCGGACAGACCGATTACTCAGACACAAACGGATGTGCCAAGGATGCCAGTCCAAGACTTCTGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 ENSMUST00000230867.2 |
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| CDS CCA 90 bp | GCCTATAGAGAAAACTGCCCTTCAGAAGTCTTGGACTGGCATCCTTaGCACATCCGTTTGTGTCTGAGTAATCGGTCTGTCCGAGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: AYRENCPSEVLDWHP*HIRLCLSNRSVREK Trigger: TTTTTCTCGGACAGACCGATTACTCAGACACAAACGGATGTGCCAAGGATGCCAGTCCAAGACTTCTGAAGGGCAGTTTTCTCTATAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119168.8 |
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| CDS-3UTR CAA 90 bp | AGAGTCAAGGACAAGCGAGGTAGCCACAAACCACAACCAAGACCAACTTCCCAGTTGAAAAGAGCCATTTaGTTCCACTACCACCACCTT | + |
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Preference number: 5 (lower is better) Translates to: RVKDKRGSHKPQPRPTSQLKRAI*FHYHHL Trigger: AAGGTGGTGGTAGTGGAACAAAATGGCTCTTTTCAA...CTGGGAAGTTGGTCTTGGTTGTGGTTTGTGGCTACCTCGCTTGTCCTTGACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118729.8 ENSMUST00000119800.8 |
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| CDS TCA 90 bp | CTCTTTGCGGTTGCGGGATTTATCACTGTCTTTTCGGTGGCCCTTTaGAGACAAATCAAATCTAGGCTTACAGTCCATCTGACTGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: LFAVAGFITVFSVAL*RQIKSRLTVHLTGA Trigger: TGCTCCAGTCAGATGGACTGTAAGCCTAGATTTGATTTGTCTTCAAAGGGCCACCGAAAAGACAGTGATAAATCCCGCAACCGCAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000119168.8 ENSMUST00000119800.8 ENSMUST00000133986.2 ENSMUST00000139960.8 ENSMUST00000141465.9 |
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| CDS-3UTR CAA 90 bp | TTTCCAGGGGTAGACAAGATAGAAGGGTGTTATAACAGAGTAAGGTCAAGAATACCGTTTTCAGCCTGCTaGCTGGCAATCTGGCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: FPGVDKIEGCYNRVRSRIPFSAC*LAIWLS Trigger: GCTGAGCCAGATTGCCAGCAAGCAGGCTGAAAACGG...TATTCTTGACCTTACTCTGTTATAACACCCTTCTATCTTGTCTACCCCTGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 |
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| CDS GCA 72 bp | GCCCTGACTGGAGCACCTCAGCACATCAGGGCTACCTaGCCGCTCGCCGTTTTCAGCCTGCTTGCTGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: ALTGAPQHIRAT*PLAVFSLLAGN Trigger: ATTGCCAGCAAGCAGGCTGAAAACGGCGAGCGGGCAGGTAGCCCTGATGTGCTGAGGTGCTCCAGTCAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118729.8 ENSMUST00000229886.2 |
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| CDS GCA 72 bp | CATCTGACTGGAGCACCTCAGCACATCAGGGCTACCTaGCCGCTCGCCGTTTTCAGCCTGCTTGCTGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: HLTGAPQHIRAT*PLAVFSLLAGN Trigger: ATTGCCAGCAAGCAGGCTGAAAACGGCGAGCGGGCAGGTAGCCCTGATGTGCTGAGGTGCTCCAGTCAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000119168.8 ENSMUST00000119800.8 ENSMUST00000133986.2 ENSMUST00000139960.8 ENSMUST00000141465.9 |
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| CDS GCA 72 bp | CAGGGCTACCTGCCCGCTCGCCGTTTTCAGCCTGCTTaGTGGCAATCTGGCTCAGCATCATCTTCTTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: QGYLPARRFQPA*WQSGSASSSCW Trigger: CCAGCAAGAAGATGATGCTGAGCCAGATTGCCAGCAAGCAGGCTGAAAACGGCGAGCGGGCAGGTAGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141465.9 |
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| CDS CCA 72 bp | GCCCGCTCGCCGTTTTCAGCCTGCTTGCTGGCAATCTaGCTCAGCATCATCTTCTTGCTGGCTGCAGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: ARSPFSACLLAI*LSIIFLLAAVG Trigger: TCCCACTGCAGCCAGCAAGAAGATGATGCTGAGCCAGATTGCCAGCAAGCAGGCTGAAAACGGCGAGCGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141465.9 |
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| CDS CCA 72 bp | GGCTACCTGCCCGCTCGCCGTTTTCAGCCTGCTTGCTaGCAATCTGGCTCAGCATCATCTTCTTGCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GYLPARRFQPAC*QSGSASSSCWL Trigger: CAGCCAGCAAGAAGATGATGCTGAGCCAGATTGCCAGCAAGCAGGCTGAAAACGGCGAGCGGGCAGGTAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141465.9 |
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| CDS CAA 90 bp | CTCAGCACATCAGGGCTACCTGCCCGCTCGCCGTTTTCAGCCTGCTaGCTGGCAATCTGGCTCAGCATCATCTTCTTGCTGGCTGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: LSTSGLPARSPFSAC*LAIWLSIIFLLAAV Trigger: CACTGCAGCCAGCAAGAAGATGATGCTGAGCCAGATTGCCAGCAAGCAGGCTGAAAACGGCGAGCGGGCAGGTAGCCCTGATGTGCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141465.9 |
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| CDS CAA 72 bp | TCAGGGCTACCTGCCCGCTCGCCGTTTTCAGCCTGCTaGCTGGCAATCTGGCTCAGCATCATCTTCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SGLPARSPFSAC*LAIWLSIIFLL Trigger: CAGCAAGAAGATGATGCTGAGCCAGATTGCCAGCAAGCAGGCTGAAAACGGCGAGCGGGCAGGTAGCCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141465.9 |
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| CDS GCA 72 bp | GAGAGGCCTCAGCCAAGCTGTCATCCTCTTTGCGGTTaGGGGATTTATCACTGTCTTTTCGGTGGCCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: ERPQPSCHPLCG*GIYHCLFGGPD Trigger: GTCAGGGCCACCGAAAAGACAGTGATAAATCCCGCAACCGCAAAGAGGATGACAGCTTGGCTGAGGCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118729.8 ENSMUST00000229886.2 |
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| CDS GCA 72 bp | GAGAGGCCTCAGCCAAGCTGTCATCCTCTTTGCGGTTaGGGGATTTATCACTGTCTTTTCGGTGGCCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: ERPQPSCHPLCG*GIYHCLFGGPE Trigger: CTCAGGGCCACCGAAAAGACAGTGATAAATCCCGCAACCGCAAAGAGGATGACAGCTTGGCTGAGGCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000230867.2 |
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| CDS CAA 90 bp | CCGTTTTCAGCCTGCTTGCTGGCAATCTGGCTCAGCATCATCTTCTaGCTGGCTGCAGTGGGAACCAAACTCACACCTGCTAGGCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PFSACLLAIWLSIIF*LAAVGTKLTPARPS Trigger: TGAAGGCCTAGCAGGTGTGAGTTTGGTTCCCACTGCAGCCAGCAAGAAGATGATGCTGAGCCAGATTGCCAGCAAGCAGGCTGAAAACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141465.9 |
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| CDS GCA 72 bp | GAGAGGCCTCAGCCAAGCTGTCATCCTCTTTGCGGTTaGGGGATTTATCACTGTCTTTTCGGTGGCCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: ERPQPSCHPLCG*GIYHCLFGGPL Trigger: CAAAGGGCCACCGAAAAGACAGTGATAAATCCCGCAACCGCAAAGAGGATGACAGCTTGGCTGAGGCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000119168.8 ENSMUST00000119800.8 ENSMUST00000133986.2 ENSMUST00000139960.8 ENSMUST00000141465.9 |
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| CDS CCA 72 bp | GAAAACTGCCCTTCAGAAGTCTTGGACTGGCATCCTTaGCACATCCGTTTGTGTCTGAGTAATCGGTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: ENCPSEVLDWHP*HIRLCLSNRSV Trigger: GACAGACCGATTACTCAGACACAAACGGATGTGCCAAGGATGCCAGTCCAAGACTTCTGAAGGGCAGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 ENSMUST00000230867.2 |
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| CDS TCA 72 bp | TCTTGGACTGGCATCCTTGGCACATCCGTTTGTGTCTaGGTAATCGGTCTGTCCGAGAAAAACACTGATGAC | + |
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Preference number: 6 (lower is better) Translates to: SWTGILGTSVCV*VIGLSEKNTDD Trigger: GTCATCAGTGTTTTTCTCGGACAGACCGATTACTCAGACACAAACGGATGTGCCAAGGATGCCAGTCCAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 ENSMUST00000230867.2 |
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| CDS CAA 72 bp | TCAGAAGTCTTGGACTGGCATCCTTGGCACATCCGTTaGTGTCTGAGTAATCGGTCTGTCCGAGAAAAACAC | + |
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Preference number: 6 (lower is better) Translates to: SEVLDWHPWHIR*CLSNRSVREKH Trigger: GTGTTTTTCTCGGACAGACCGATTACTCAGACACAAACGGATGTGCCAAGGATGCCAGTCCAAGACTTCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 ENSMUST00000230867.2 |
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| CDS TCA 72 bp | GTACCCGCTTGTGGCGTTCGAGATGGTACTTCTGGATaGAACGCATATCACAGACATCACACTCAAATGGTT | + |
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Preference number: 6 (lower is better) Translates to: VPACGVRDGTSG*NAYHRHHTQMV Trigger: AACCATTTGAGTGTGATGTCTGTGATATGCGTTTCATCCAGAAGTACCATCTCGAACGCCACAAGCGGGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000118729.8 ENSMUST00000119168.8 ENSMUST00000119800.8 ENSMUST00000141465.9 ENSMUST00000230867.2 |
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| CDS CCA 72 bp | GCCTATAGAGAAAACTGCCCTTCAGAAGTCTTGGACTaGCATCCTTGGCACATCCGTTTGTGTCTGAGTAAT | + |
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Preference number: 6 (lower is better) Translates to: AYRENCPSEVLD*HPWHIRLCLSN Trigger: ATTACTCAGACACAAACGGATGTGCCAAGGATGCCAGTCCAAGACTTCTGAAGGGCAGTTTTCTCTATAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119168.8 |
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| CDS TCA 72 bp | GTTGCGGGATTTATCACTGTCTTTTCGGTGGCCCTTTaGAGACAAATCAAATCTAGGCTTACAGTCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: VAGFITVFSVAL*RQIKSRLTVHL Trigger: CAGATGGACTGTAAGCCTAGATTTGATTTGTCTTCAAAGGGCCACCGAAAAGACAGTGATAAATCCCGCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000119168.8 ENSMUST00000119800.8 ENSMUST00000133986.2 ENSMUST00000139960.8 ENSMUST00000141465.9 |
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| CDS CCA 72 bp | TCTTTGCGGTTGCGGGATTTATCACTGTCTTTTCGGTaGCCCTTTGAAGACAAATCAAATCTAGGCTTACAG | + |
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Preference number: 6 (lower is better) Translates to: SLRLRDLSLSFR*PFEDKSNLGLQ Trigger: CTGTAAGCCTAGATTTGATTTGTCTTCAAAGGGCCACCGAAAAGACAGTGATAAATCCCGCAACCGCAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000119168.8 ENSMUST00000119800.8 ENSMUST00000133986.2 ENSMUST00000139960.8 ENSMUST00000141465.9 |
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