Pregenerated sensors for ZFP74 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059975Ensembl transcript IDs: ENSMUST00000032797.9, ENSMUST00000108205.9, ENSMUST00000108211.8, ENSMUST00000108212.8
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCTCTGCTGAGATCCACCAGCGCTCTGGTGCTCACGCTGGCCCCTaGCTTGAGAGACCGTGTGCACAGTTCCTTTTCTTCTTTCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: SSAEIHQRSGAHAGP*LERPCAQFLFFFLF Trigger: GAAGAGAAAGAAGAAAAGGAACTGTGCACACGGTCTCTCAAGCCAGGGGCCAGCGTGAGCACCAGAGCGCTGGTGGATCTCAGCAGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
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| 3UTR GCA 90 bp | TGCTGGACAAAGCAGGGAAGAAAGCATGACCTCAGGGCTTCAGGTTaGTGGCTCAGCACAGTGCTGATGTCACGGGCATTTCTGTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: CWTKQGRKHDLRASG*WLSTVLMSRAFLCL Trigger: CAGACACAGAAATGCCCGTGACATCAGCACTGTGCTGAGCCAGCAACCTGAAGCCCTGAGGTCATGCTTTCTTCCCTGCTTTGTCCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108212.8 |
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| 3UTR CCA 90 bp | TGGACAAAGCAGGGAAGAAAGCATGACCTCAGGGCTTCAGGTTGCTaGCTCAGCACAGTGCTGATGTCACGGGCATTTCTGTGTCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: WTKQGRKHDLRASGC*LSTVLMSRAFLCLL Trigger: AAGCAGACACAGAAATGCCCGTGACATCAGCACTGTGCTGAGCCAGCAACCTGAAGCCCTGAGGTCATGCTTTCTTCCCTGCTTTGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108212.8 |
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| 3UTR TCA 90 bp | GTGAGAAAGACTGATAAAGTGCTGGACAAAGCAGGGAAGAAAGCATaGCCTCAGGGCTTCAGGTTGCTGGCTCAGCACAGTGCTGATGTC | + |
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Preference number: 1 (lower is better) Translates to: VRKTDKVLDKAGKKA*PQGFRLLAQHSADV Trigger: GACATCAGCACTGTGCTGAGCCAGCAACCTGAAGCCCTGAGGTCATGCTTTCTTCCCTGCTTTGTCCAGCACTTTATCAGTCTTTCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108212.8 |
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| 3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTACATGCATACCATGGCGTGCCATTaGAGGTCAGAGGACAAGTGTAGAAGTTGGTTCTTTCCACCCACC | + |
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Preference number: 1 (lower is better) Translates to: VCVCVCVYMHTMACH*RSEDKCRSWFFPPT Trigger: GGTGGGTGGAAAGAACCAACTTCTACACTTGTCCTCTGACCTCCAATGGCACGCCATGGTATGCATGTACACACACACACACACACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR GCA 90 bp | AGTTTCTCATACAATTGGTCCCCGAAGTGGGAATTGTCTAACAGATaGATGGGACCTTCCCAAGGCTCTCCTACAGTCAGCGCCAGAACT | + |
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Preference number: 1 (lower is better) Translates to: SFSYNWSPKWELSNR*MGPSQGSPTVSART Trigger: AGTTCTGGCGCTGACTGTAGGAGAGCCTTGGGAAGGTCCCATGCATCTGTTAGACAATTCCCACTTCGGGGACCAATTGTATGAGAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR CCA 90 bp | AGGTCAGAGGACAAGTGTAGAAGTTGGTTCTTTCCACCCACCATGTaGATTCTGGGTATCGTAGTCAGCTGTGAAGCTTGGCAGCAAACC | + |
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Preference number: 1 (lower is better) Translates to: RSEDKCRSWFFPPTM*ILGIVVSCEAWQQT Trigger: GGTTTGCTGCCAAGCTTCACAGCTGACTACGATACCCAGAATCCACATGGTGGGTGGAAAGAACCAACTTCTACACTTGTCCTCTGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTACATGCATACCATGGCGTaGCATTGGAGGTCAGAGGACAAGTGTAGAAGTTGGTTCTTTCCA | + |
|
Preference number: 1 (lower is better) Translates to: VCVCVCVCVYMHTMA*HWRSEDKCRSWFFP Trigger: TGGAAAGAACCAACTTCTACACTTGTCCTCTGACCTCCAATGGCACGCCATGGTATGCATGTACACACACACACACACACACACACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATGCATACCATaGCGTGCCATTGGAGGTCAGAGGACAAGTGTAGAAGTTGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: CVCVCVCVCVCTCIP*RAIGGQRTSVEVGS Trigger: AGAACCAACTTCTACACTTGTCCTCTGACCTCCAATGGCACGCCATGGTATGCATGTACACACACACACACACACACACACACACACACA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR GCA 90 bp | TTTCTGTTTAAAAATCCAGAAACTGGTATTATGGCAGCACATGCCTaGAAACCCAGCACTCAGAAGGTTAGAGGCCATGAGTCTGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: FLFKNPETGIMAAHA*KPSTQKVRGHESEP Trigger: GGGCTCAGACTCATGGCCTCTAACCTTCTGAGTGCTGGGTTTGCAGGCATGTGCTGCCATAATACCAGTTTCTGGATTTTTAAACAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
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| 3UTR TCA 90 bp | CCTTGCCGTATTACTCTGAAATCAGTTCATGAAATCCTTTATAACTaGTGTGTAAATTTTGAGTGGAAGTATGGACAAGGGAGAGACTGG | + |
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Preference number: 1 (lower is better) Translates to: PCRITLKSVHEILYN*CVNFEWKYGQGRDW Trigger: CCAGTCTCTCCCTTGTCCATACTTCCACTCAAAATTTACACATCAGTTATAAAGGATTTCATGAACTGATTTCAGAGTAATACGGCAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR CAA 90 bp | CTGCTGAGATCCACCAGCGCTCTGGTGCTCACGCTGGCCCCTGGCTaGAGAGACCGTGTGCACAGTTCCTTTTCTTCTTTCTCTTCGACT | + |
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Preference number: 2 (lower is better) Translates to: LLRSTSALVLTLAPG*RDRVHSSFSSFSST Trigger: AGTCGAAGAGAAAGAAGAAAAGGAACTGTGCACACGGTCTCTCAAGCCAGGGGCCAGCGTGAGCACCAGAGCGCTGGTGGATCTCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGAAACTGGTATTATGGCAGCACATGCCTGCAAACCCAGCACTCAGAAGGTTCGCTGGCCCCTGGCTTaGGAGACCGTGTGCACAGTT | + |
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Preference number: 2 (lower is better) Translates to: PETGIMAAHACKPSTQKVRWPLA*ETVCTV Trigger: AACTGTGCACACGGTCTCTCAAGCCAGGGGCCAGCG...AACCTTCTGAGTGCTGGGTTTGCAGGCATGTGCTGCCATAATACCAGTTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
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| 3UTR-3UTR TCA 90 bp | AGCACTCAGAAGGTTAGAGGCCATGAGTCTGAGCCCAGCCTGGTCTACAGAGGTCTCAAAAAGCTCTGCTaGGATCCACCAGCGCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: STQKVRGHESEPSLVYRGLKKLC*DPPALW Trigger: CCAGAGCGCTGGTGGATCTCAGCAGAGCTTTTTGAG...ACCTCTGTAGACCAGGCTGGGCTCAGACTCATGGCCTCTAACCTTCTGAGTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
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| 3UTR-3UTR TCA 90 bp | TTATGGCAGCACATGCCTGCAAACCCAGCACTCAGAAGGTTAGAGGCCATGAGTCTCAAAAAGCTCTGCTaGGATCCACCAGCGCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LWQHMPANPALRRLEAMSLKKLC*DPPALW Trigger: CCAGAGCGCTGGTGGATCTCAGCAGAGCTTTTTGAG...ACTCATGGCCTCTAACCTTCTGAGTGCTGGGTTTGCAGGCATGTGCTGCCATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
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| 3UTR-3UTR GCA 90 bp | CTCATGCCAACAGCTAGAAGCGAGCTTTTTACCTGTACCTGGCCTTCACCTGGCATGGCAGCACATGCCTaGAAACCCAGCACTCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LMPTARSELFTCTWPSPGMAAHA*KPSTQK Trigger: CTTCTGAGTGCTGGGTTTGCAGGCATGTGCTGCCAT...GCCAGGTGAAGGCCAGGTACAGGTAAAAAGCTCGCTTCTAGCTGTTGGCATGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108212.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAGCAGGGAAGAAAGCATGACCTCAGGGCTTCAGGTTGCTGGCTCAGCACAGCCCATGCAAAACTCATaGCAACAGCTAGAAGCGAGC | + |
|
Preference number: 2 (lower is better) Translates to: QSREESMTSGLQVAGSAQPMQNS*QQLEAS Trigger: GCTCGCTTCTAGCTGTTGGCATGAGTTTTGCATGGG...CTGTGCTGAGCCAGCAACCTGAAGCCCTGAGGTCATGCTTTCTTCCCTGCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108212.8 |
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| 3UTR-3UTR CCA 90 bp | GGTATCGTAGTCAGCTGTGAAGCTTGGCAGCAAACCCCTATCAGTGGGGCCGTCAGGTGTTCACTTCAATaGGAGGCAGTCCTCACATTC | + |
|
Preference number: 2 (lower is better) Translates to: GIVVSCEAWQQTPISGAVRCSLQ*EAVLTF Trigger: GAATGTGAGGACTGCCTCCCATTGAAGTGAACACCT...GACGGCCCCACTGATAGGGGTTTGCTGCCAAGCTTCACAGCTGACTACGATACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR-3UTR TCA 90 bp | CCAGCCTGGTCTACAGAGGTGTTTCAACACAATCCACAAAACCATCACCACCCCAAAGGTTCTGACGAGTaGGACAGACAGCTTTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: PAWSTEVFQHNPQNHHHPKGSDE*DRQLSG Trigger: ACCAGAAAGCTGTCTGTCTCACTCGTCAGAACCTTT...GGGGTGGTGATGGTTTTGTGGATTGTGTTGAAACACCTCTGTAGACCAGGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
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| 3UTR-3UTR GCA 90 bp | TCATGCCAACAGCTAGAAGCGAGCTTTTTACCTGTACCTGGCCTTCACCTGGCATATTATGGCAGCACATaGCTGCAAACCCAGCACTCA | + |
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Preference number: 2 (lower is better) Translates to: SCQQLEASFLPVPGLHLAYYGST*LQTQHS Trigger: TGAGTGCTGGGTTTGCAGGCATGTGCTGCCATAATA...TGCCAGGTGAAGGCCAGGTACAGGTAAAAAGCTCGCTTCTAGCTGTTGGCATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108212.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCAGAAACTGGTATTATGGCAGCACATGCCTGCAAACCCAGCACTCAGAAGGAGTCTGAGCCCAGCCTaGTCTACAGAGGTGTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: IQKLVLWQHMPANPALRRSLSPA*STEVFQ Trigger: TTGAAACACCTCTGTAGACCAGGCTGGGCTCAGACT...CCTTCTGAGTGCTGGGTTTGCAGGCATGTGCTGCCATAATACCAGTTTCTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
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| 3UTR-3UTR CCA 90 bp | AGCACTCAGAAGGTTAGAGGCCATGAGTCTGAGCCCAGCCTGGTCTACAGAGGTAGACAGACAGCTTTCTaGTACTATGACAAGAATGTC | + |
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Preference number: 2 (lower is better) Translates to: STQKVRGHESEPSLVYRGRQTAF*YYDKNV Trigger: GACATTCTTGTCATAGTACCAGAAAGCTGTCTGTCT...ACCTCTGTAGACCAGGCTGGGCTCAGACTCATGGCCTCTAACCTTCTGAGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTACATGCATACCATGGCGTGCCATTGGAGGTCAGAGGAAATTGGTCCCCGAAGTaGGAATTGTCTAACAGATGC | + |
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Preference number: 2 (lower is better) Translates to: CVCVCVHAYHGVPLEVRGNWSPK*ELSNRC Trigger: GCATCTGTTAGACAATTCCCACTTCGGGGACCAATT...TCCTCTGACCTCCAATGGCACGCCATGGTATGCATGTACACACACACACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTACATGCATACCATGGCGTGCCATTGGAGGTCAGAGGATGTTTTTGCTATTTGTaGTCCTTTCCCTTGCCGTAT | + |
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Preference number: 2 (lower is better) Translates to: CVCVCVHAYHGVPLEVRGCFCYL*SFPLPY Trigger: ATACGGCAAGGGAAAGGACCACAAATAGCAAAAACA...TCCTCTGACCTCCAATGGCACGCCATGGTATGCATGTACACACACACACACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATGCATACCATGGCGACTTGCTTTATCAAGTaGTCTTTTGCATTCGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: CVCVCVCVCVCVYMHTMATCFIK*SFAFVS Trigger: GCTGACGAATGCAAAAGACCACTTGATAAAGCAAGT...CGCCATGGTATGCATGTACACACACACACACACACACACACACACACACACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR-3UTR TCA 90 bp | ATCCAGAAACTGGTATTATGGCAGCACATGCCTGCAAACCCAGCACTCAGAAGGAGCTTTCTGGTACTATaGCAAGAATGTCTTTTGGTA | + |
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Preference number: 2 (lower is better) Translates to: IQKLVLWQHMPANPALRRSFLVL*QECLLV Trigger: TACCAAAAGACATTCTTGTCATAGTACCAGAAAGCT...CCTTCTGAGTGCTGGGTTTGCAGGCATGTGCTGCCATAATACCAGTTTCTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTACCTTTCCTATTTTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTCTAACAGATGCATaGGACCTTCCCAAGGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: FYLSYFECVCVCVCVCVCCLTDA*DLPKAL Trigger: GAGAGCCTTGGGAAGGTCCCATGCATCTGTTAGACA...ACACACACACACACACACACACACACACACACACTCAAAATAGGAAAGGTAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR-3UTR TCA 90 bp | GAAACTGGTATTATGGCAGCACATGCCTGCAAACCCAGCACTCAGAAGGTTAGAAGCTTTCTGGTACTATaGCAAGAATGTCTTTTGGTA | + |
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Preference number: 2 (lower is better) Translates to: ETGIMAAHACKPSTQKVRSFLVL*QECLLV Trigger: TACCAAAAGACATTCTTGTCATAGTACCAGAAAGCT...TCTAACCTTCTGAGTGCTGGGTTTGCAGGCATGTGCTGCCATAATACCAGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCGACTGCAGCCCAAACGCAACGGGACCTTACATTTTAAATTGAGAGTCAATAGACAGACAGCTTTCTaGTACTATGACAAGAATGTC | + |
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Preference number: 2 (lower is better) Translates to: LRLQPKRNGTLHFKLRVNRQTAF*YYDKNV Trigger: GACATTCTTGTCATAGTACCAGAAAGCTGTCTGTCT...ATTGACTCTCAATTTAAAATGTAAGGTCCCGTTGCGTTTGGGCTGCAGTCGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
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| 3UTR-3UTR TCA 90 bp | ATTGCCTTTTGTTTTTCTACTACTTTCAACTGGGAAAGGAGCTATGTTGAAGATAAAGGTTCTGACGAGTaGGACAGACAGCTTTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: IAFCFSTTFNWERSYVEDKGSDE*DRQLSG Trigger: ACCAGAAAGCTGTCTGTCTCACTCGTCAGAACCTTT...ATCTTCAACATAGCTCCTTTCCCAGTTGAAAGTAGTAGAAAAACAAAAGGCAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
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| 3UTR-3UTR GCA 90 bp | AATCTGGGAACATTTATAGATAGATCTTTGCAGACATACATGGATACTTCTGAGGAATTGTCTAACAGATaGATGGGACCTTCCCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: NLGTFIDRSLQTYMDTSEELSNR*MGPSQG Trigger: GCCTTGGGAAGGTCCCATGCATCTGTTAGACAATTC...CTCAGAAGTATCCATGTATGTCTGCAAAGATCTATCTATAAATGTTCCCAGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR CAA 90 bp | TATTTTCTTTCAGACTTGAAAGAGAATACTGATATCACTGGGTGTTaGGTGACAGTTTCTCATACAATTGGTCCCCGAAGTGGGAATTGT | + |
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Preference number: 2 (lower is better) Translates to: YFLSDLKENTDITGC*VTVSHTIGPRSGNC Trigger: ACAATTCCCACTTCGGGGACCAATTGTATGAGAAACTGTCACCAAACACCCAGTGATATCAGTATTCTCTTTCAAGTCTGAAAGAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR CAA 90 bp | AGGAGCTCGAGTTCGTTGATTGACAGTAGATATTTTCTTTCAGACTaGAAAGAGAATACTGATATCACTGGGTGTTTGGTGACAGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: RSSSSLIDSRYFLSD*KENTDITGCLVTVS Trigger: AGAAACTGTCACCAAACACCCAGTGATATCAGTATTCTCTTTCAAGTCTGAAAGAAAATATCTACTGTCAATCAACGAACTCGAGCTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR CAA 90 bp | AGAGCAAACCAAGCCACAAATCTGGGAACATTTATAGATAGATCTTaGCAGACATACATGGATACTTCTGAGTCCAGTACACTAAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: RANQATNLGTFIDRS*QTYMDTSESSTLKE Trigger: TTCTTTTAGTGTACTGGACTCAGAAGTATCCATGTATGTCTGCAAAGATCTATCTATAAATGTTCCCAGATTTGTGGCTTGGTTTGCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR-3UTR CCA 90 bp | AATCTGGGAACATTTATAGATAGATCTTTGCAGACATACATGGATACTTCTGAGTGTGTAAATTTTGAGTaGAAGTATGGACAAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: NLGTFIDRSLQTYMDTSECVNFE*KYGQGR Trigger: TCTCCCTTGTCCATACTTCCACTCAAAATTTACACA...CTCAGAAGTATCCATGTATGTCTGCAAAGATCTATCTATAAATGTTCCCAGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR-3UTR CAA 90 bp | AGCACTCAGAAGGTTAGAGGCCATGAGTCTGAGCCCAGCCTGGTCTACAGAGGTACGCTGGCCCCTGGCTaGAGAGACCGTGTGCACAGT | + |
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Preference number: 3 (lower is better) Translates to: STQKVRGHESEPSLVYRGTLAPG*RDRVHS Trigger: ACTGTGCACACGGTCTCTCAAGCCAGGGGCCAGCGT...ACCTCTGTAGACCAGGCTGGGCTCAGACTCATGGCCTCTAACCTTCTGAGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
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| 3UTR TCA 72 bp | CCACCAGCGCTCTGGTGCTCACGCTGGCCCCTGGCTTaGGAGACCGTGTGCACAGTTCCTTTTCTTCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: PPALWCSRWPLA*ETVCTVPFLLS Trigger: AGAAAGAAGAAAAGGAACTGTGCACACGGTCTCTCAAGCCAGGGGCCAGCGTGAGCACCAGAGCGCTGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
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| 3UTR CCA 72 bp | CAGGGAAGAAAGCATGACCTCAGGGCTTCAGGTTGCTaGCTCAGCACAGTGCTGATGTCACGGGCATTTCTG | + |
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Preference number: 3 (lower is better) Translates to: QGRKHDLRASGC*LSTVLMSRAFL Trigger: CAGAAATGCCCGTGACATCAGCACTGTGCTGAGCCAGCAACCTGAAGCCCTGAGGTCATGCTTTCTTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108212.8 |
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| 3UTR CCA 72 bp | CTGATTGTGTCGCGTGCTATGAGGTGTTCACTTCAATaGGAGGCAGTCCTCACATTCACCGTGGTCACGGCG | + |
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Preference number: 3 (lower is better) Translates to: LIVSRAMRCSLQ*EAVLTFTVVTA Trigger: CGCCGTGACCACGGTGAATGTGAGGACTGCCTCCCATTGAAGTGAACACCTCATAGCACGCGACACAATCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR GCA 72 bp | TCTCCTACAGTCAGCGCCAGAACTGATTGTGTCGCGTaGTATGAGGTGTTCACTTCAATGGGAGGCAGTCCT | + |
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Preference number: 3 (lower is better) Translates to: SPTVSARTDCVA*YEVFTSMGGSP Trigger: AGGACTGCCTCCCATTGAAGTGAACACCTCATAGCACGCGACACAATCAGTTCTGGCGCTGACTGTAGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR TCA 72 bp | ACCTCAGGGCTTCAGGTTGCTGGCTCAGCACAGTGCTaGTGTCACGGGCATTTCTGTGTCTGCTTTGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: TSGLQVAGSAQC*CHGHFCVCFEK Trigger: TTTTTCAAAGCAGACACAGAAATGCCCGTGACATCAGCACTGTGCTGAGCCAGCAACCTGAAGCCCTGAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108212.8 |
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| 3UTR TCA 72 bp | ACTGATAAAGTGCTGGACAAAGCAGGGAAGAAAGCATaGCCTCAGGGCTTCAGGTTGCTGGCTCAGCACAGT | + |
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Preference number: 3 (lower is better) Translates to: TDKVLDKAGKKA*PQGFRLLAQHS Trigger: ACTGTGCTGAGCCAGCAACCTGAAGCCCTGAGGTCATGCTTTCTTCCCTGCTTTGTCCAGCACTTTATCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108212.8 |
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| 3UTR GCA 72 bp | TACAATTGGTCCCCGAAGTGGGAATTGTCTAACAGATaGATGGGACCTTCCCAAGGCTCTCCTACAGTCAGC | + |
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Preference number: 3 (lower is better) Translates to: YNWSPKWELSNR*MGPSQGSPTVS Trigger: GCTGACTGTAGGAGAGCCTTGGGAAGGTCCCATGCATCTGTTAGACAATTCCCACTTCGGGGACCAATTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR CCA 72 bp | ACCATTTCCAGTGACACAGAGGACATGGGGAGCCCATaGAATGATGTGTCAGAGGACATGCAAGTAGCACCA | + |
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Preference number: 3 (lower is better) Translates to: TISSDTEDMGSP*NDVSEDMQVAP Trigger: TGGTGCTACTTGCATGTCCTCTGACACATCATTCCATGGGCTCCCCATGTCCTCTGTGTCACTGGAAATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108212.8 |
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| 3UTR CCA 72 bp | GCGTGCCATTGGAGGTCAGAGGACAAGTGTAGAAGTTaGTTCTTTCCACCCACCATGTGGATTCTGGGTATC | + |
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Preference number: 3 (lower is better) Translates to: ACHWRSEDKCRS*FFPPTMWILGI Trigger: GATACCCAGAATCCACATGGTGGGTGGAAAGAACCAACTTCTACACTTGTCCTCTGACCTCCAATGGCACGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR GCA 72 bp | TGTGTGTGTGTGTGTGTGTACATGCATACCATGGCGTaGCATTGGAGGTCAGAGGACAAGTGTAGAAGTTGG | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVYMHTMA*HWRSEDKCRSW Trigger: CCAACTTCTACACTTGTCCTCTGACCTCCAATGGCACGCCATGGTATGCATGTACACACACACACACACACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR CCA 72 bp | CTCAGAAGGTTAGAGGCCATGAGTCTGAGCCCAGCCTaGTCTACAGAGGTGTTTCAACACAATCCACAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LRRLEAMSLSPA*STEVFQHNPQN Trigger: GTTTTGTGGATTGTGTTGAAACACCTCTGTAGACCAGGCTGGGCTCAGACTCATGGCCTCTAACCTTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
||
| 3UTR CCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTACATGCATACCATaGCGTGCCATTGGAGGTCAGAGGACAAGTGTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VCVCVCVCTCIP*RAIGGQRTSVE Trigger: TTCTACACTTGTCCTCTGACCTCCAATGGCACGCCATGGTATGCATGTACACACACACACACACACACACAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| 3UTR-3UTR CAA 90 bp | TATCAGTGGGGCCGTCTCACCAGCCTGAGGGAATCTGTATATCTTTGTTTAAGATCCCCGAAGTGGGAATaGTCTAACAGATGCATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: YQWGRLTSLRESVYLCLRSPKWE*SNRCMG Trigger: TCCCATGCATCTGTTAGACAATTCCCACTTCGGGGA...TCTTAAACAAAGATATACAGATTCCCTCAGGCTGGTGAGACGGCCCCACTGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTACATGCATACCATGGCGTGCCATTGGAGGTCAGAGGATTTTGTTTTTGCTATTaGTGGTCCTTTCCCTTGCCG | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCVHAYHGVPLEVRGFCFCY*WSFPLP Trigger: CGGCAAGGGAAAGGACCACAAATAGCAAAAACAAAA...TCCTCTGACCTCCAATGGCACGCCATGGTATGCATGTACACACACACACACACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCCTGGTCTACAGAGGTGTTTCAACACAATCCACAAAACCATCACCACCCCAAATGGTTTATGCTGTaGGTTGGCATTATCCCGATA | + |
|
Preference number: 3 (lower is better) Translates to: PAWSTEVFQHNPQNHHHPKWFML*VGIIPI Trigger: TATCGGGATAATGCCAACCAACAGCATAAACCATTT...GGGGTGGTGATGGTTTTGTGGATTGTGTTGAAACACCTCTGTAGACCAGGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
||
| 3UTR TCA 72 bp | ACCACATGGTGGCTCACAACCATCTTTAATAAGATCTaGCGCCCTCTTCTGGTGTGTCTGAAGAGACAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: TTWWLTTIFNKI*RPLLVCLKRQL Trigger: TAGCTGTCTCTTCAGACACACCAGAAGAGGGCGTCAGATCTTATTAAAGATGGTTGTGAGCCACCATGTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108212.8 |
||
| 3UTR TCA 72 bp | CATATATGGATGAGTGTCCTATTGGAGAATCCTGACTaGTACTCTGGGAACAAGAATGGCCTAGAGAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: HIWMSVLLENPD*YSGNKNGLERG Trigger: GCCCCTCTCTAGGCCATTCTTGTTCCCAGAGTATCAGTCAGGATTCTCCAATAGGACACTCATCCATATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108212.8 |
||
| 3UTR GCA 72 bp | AAAAATCCAGAAACTGGTATTATGGCAGCACATGCCTaGAAACCCAGCACTCAGAAGGTTAGAGGCCATGAG | + |
|
Preference number: 3 (lower is better) Translates to: KNPETGIMAAHA*KPSTQKVRGHE Trigger: CTCATGGCCTCTAACCTTCTGAGTGCTGGGTTTGCAGGCATGTGCTGCCATAATACCAGTTTCTGGATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGAAACTGGTATTATGGCAGCACATGCCTGCAAACCCAGCACTCAGAAGGTGGGAAAGGAGCTATGTaGAAGATAAATGCTTCAATT | + |
|
Preference number: 3 (lower is better) Translates to: SRNWYYGSTCLQTQHSEGGKGAM*KINASI Trigger: AATTGAAGCATTTATCTTCAACATAGCTCCTTTCCC...ACCTTCTGAGTGCTGGGTTTGCAGGCATGTGCTGCCATAATACCAGTTTCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
||
| 3UTR CCA 72 bp | TATCACTGGGTGTTTGGTGACAGTTTCTCATACAATTaGTCCCCGAAGTGGGAATTGTCTAACAGATGCATG | + |
|
Preference number: 3 (lower is better) Translates to: YHWVFGDSFSYN*SPKWELSNRCM Trigger: CATGCATCTGTTAGACAATTCCCACTTCGGGGACCAATTGTATGAGAAACTGTCACCAAACACCCAGTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTCGACTGCAGCCCAAACGCAACGGGACCTTACATTTTAAATTGAGAGTCAATAAATGGTTTATGCTGTaGGTTGGCATTATCCCGATA | + |
|
Preference number: 3 (lower is better) Translates to: LRLQPKRNGTLHFKLRVNKWFML*VGIIPI Trigger: TATCGGGATAATGCCAACCAACAGCATAAACCATTT...ATTGACTCTCAATTTAAAATGTAAGGTCCCGTTGCGTTTGGGCTGCAGTCGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTTACCTTTCCTATTTTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCAGTTTCTCATACAATaGGTCCCCGAAGTGGGAATT | + |
|
Preference number: 3 (lower is better) Translates to: FYLSYFECVCVCVCVCVCQFLIQ*VPEVGI Trigger: AATTCCCACTTCGGGGACCAATTGTATGAGAAACTG...ACACACACACACACACACACACACACACACACACTCAAAATAGGAAAGGTAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| 3UTR-3UTR CAA 90 bp | GCCTTTCTGTTTAAAAATCCAGAAACTGGTATTATGGCAGCACATGCCTGCAAAGGGAAAGGAGCTATGTaGAAGATAAATGCTTCAATT | + |
|
Preference number: 3 (lower is better) Translates to: AFLFKNPETGIMAAHACKGKGAM*KINASI Trigger: AATTGAAGCATTTATCTTCAACATAGCTCCTTTCCC...TTTGCAGGCATGTGCTGCCATAATACCAGTTTCTGGATTTTTAAACAGAAAGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108212.8 |
||
| 3UTR-3UTR CAA 90 bp | AATCTGGGAACATTTATAGATAGATCTTTGCAGACATACATGGATACTTCTGAGGATATCACTGGGTGTTaGGTGACAGTTTCTCATACA | + |
|
Preference number: 3 (lower is better) Translates to: NLGTFIDRSLQTYMDTSEDITGC*VTVSHT Trigger: TGTATGAGAAACTGTCACCAAACACCCAGTGATATC...CTCAGAAGTATCCATGTATGTCTGCAAAGATCTATCTATAAATGTTCCCAGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| 3UTR GCA 72 bp | TCCAATGATTTCAGTAGCACCAGGCAGATAGAAAATTaGCAAGTCTTGGGTTTCAATTTGTTTCCAAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SNDFSSTRQIEN*QVLGFNLFPKV Trigger: AACTTTTGGAAACAAATTGAAACCCAAGACTTGGCAATTTTCTATCTGCCTGGTGCTACTGAAATCATTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| 3UTR CAA 72 bp | TCCACCAGCGCTCTGGTGCTCACGCTGGCCCCTGGCTaGAGAGACCGTGTGCACAGTTCCTTTTCTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: STSALVLTLAPG*RDRVHSSFSSF Trigger: GAAAGAAGAAAAGGAACTGTGCACACGGTCTCTCAAGCCAGGGGCCAGCGTGAGCACCAGAGCGCTGGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
||
| CDS-3UTR CCA 90 bp | GTCGCGTGCTATGAGGTGTTCACTTCAATGGGAGGCAGTCCTCACATTCACCGTTCCCAAAATCTCCCCTaGACAGGGTCTCCACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VACYEVFTSMGGSPHIHRSQNLP*TGSPQH Trigger: GTGCTGTGGAGACCCTGTCCAGGGGAGATTTTGGGA...ACGGTGAATGTGAGGACTGCCTCCCATTGAAGTGAACACCTCATAGCACGCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTACATGCATACCATGGCGTGCCATTGGAGGTCAGAGGATTCGCAGATGAAGCGTaGGGGAAGCGATCTGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVHAYHGVPLEVRGFADEA*GKRSGK Trigger: TTTCCCAGATCGCTTCCCTCACGCTTCATCTGCGAA...TCCTCTGACCTCCAATGGCACGCCATGGTATGCATGTACACACACACACACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| CDS-3UTR TCA 90 bp | GGTATCGTAGTCAGCTGTGAAGCTTGGCAGCAAACCCCTATCAGTGGGGCCGTCGTGCCTGACAAGGTTTaGCATCTGGATAAAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GIVVSCEAWQQTPISGAVVPDKV*HLDKSF Trigger: AAAGCTTTTATCCAGATGTCAAACCTTGTCAGGCAC...GACGGCCCCACTGATAGGGGTTTGCTGCCAAGCTTCACAGCTGACTACGATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| CDS-3UTR CCA 90 bp | GAAACTGGTATTATGGCAGCACATGCCTGCAAACCCAGCACTCAGAAGGTTAGATCCCAAAATCTCCCCTaGACAGGGTCTCCACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ETGIMAAHACKPSTQKVRSQNLP*TGSPQH Trigger: GTGCTGTGGAGACCCTGTCCAGGGGAGATTTTGGGA...TCTAACCTTCTGAGTGCTGGGTTTGCAGGCATGTGCTGCCATAATACCAGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTACATGCATACCATGGCGTGCCATTGGAGGTCAGAGGAGTGAGGGAAGCGATCTaGGAAAAGGCTTTCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVHAYHGVPLEVRGVREAI*EKAFPH Trigger: ATGTGGGAAAGCCTTTTCCCAGATCGCTTCCCTCAC...TCCTCTGACCTCCAATGGCACGCCATGGTATGCATGTACACACACACACACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| CDS-3UTR CCA 90 bp | GGCTTGAGAGACCGTGTGCACAGTTCCTTTTCTTCTTTCTCTTCGACTGCAGCCTTTGGGGACCTTCTTTaGGGGAAACATCCCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: GLRDRVHSSFSSFSSTAAFGDLL*GKHPRS Trigger: GGATCTGGGATGTTTCCCCCAAAGAAGGTCCCCAAA...GGCTGCAGTCGAAGAGAAAGAAGAAAAGGAACTGTGCACACGGTCTCTCAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
||
| CDS-3UTR TCA 90 bp | GGCTTGAGAGACCGTGTGCACAGTTCCTTTTCTTCTTTCTCTTCGACTGCAGCCCTATATAGGTTCCGCTaGGTAGGATCCAGTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLRDRVHSSFSSFSSTAALYRFR*VGSSCF Trigger: GAAGCAACTGGATCCTACTCAGCGGAACCTATATAG...GGCTGCAGTCGAAGAGAAAGAAGAAAAGGAACTGTGCACACGGTCTCTCAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTACATGCATACCATGGCGTGCCATTGGAGGTCAGAGGAATGAGGTCCAGGGTCTaGCTAAAGCCTTTTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVHAYHGVPLEVRGMRSRV*LKPFPQ Trigger: TTGTGGAAAAGGCTTTAGTCAGACCCTGGACCTCAT...TCCTCTGACCTCCAATGGCACGCCATGGTATGCATGTACACACACACACACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| CDS-3UTR TCA 90 bp | GTCGCGTGCTATGAGGTGTTCACTTCAATGGGAGGCAGTCCTCACATTCACCGTTTCTCATGTGTAAGTTaGGTAGTGAGCACTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VACYEVFTSMGGSPHIHRFSCVS*VVSTGR Trigger: TCTCCCAGTGCTCACTACTCAACTTACACATGAGAA...ACGGTGAATGTGAGGACTGCCTCCCATTGAAGTGAACACCTCATAGCACGCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTACATGCATACCATGGCGTGCCATTGGAGGTCAGAGGAGTGTCTGACAAGGTGTaGCTTTTGGCTGAAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVHAYHGVPLEVRGVSDKV*LLAESF Trigger: AAAGCTTTCAGCCAAAAGTCACACCTTGTCAGACAC...TCCTCTGACCTCCAATGGCACGCCATGGTATGCATGTACACACACACACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| CDS-3UTR GCA 90 bp | AGCACTCAGAAGGTTAGAGGCCATGAGTCTGAGCCCAGCCTGGTCTACAGAGGTAGATCCAACCATAATTaGAAATTCCTCCGGACATTC | + |
|
Preference number: 4 (lower is better) Translates to: STQKVRGHESEPSLVYRGRSNHN*KFLRTF Trigger: GAATGTCCGGAGGAATTTGCAATTATGGTTGGATCT...ACCTCTGTAGACCAGGCTGGGCTCAGACTCATGGCCTCTAACCTTCTGAGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
||
| 3UTR CAA 72 bp | GACAGTTTCTCATACAATTGGTCCCCGAAGTGGGAATaGTCTAACAGATGCATGGGACCTTCCCAAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSFSYNWSPKWE*SNRCMGPSQGS Trigger: AGAGCCTTGGGAAGGTCCCATGCATCTGTTAGACAATTCCCACTTCGGGGACCAATTGTATGAGAAACTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| CDS-3UTR TCA 90 bp | TTTTACCTTTCCTATTTTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGGGCGAGCTGGTGTaGAATGGCTGCATAGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: FYLSYFECVCVCVCVCVCWGELV*NGCIAS Trigger: CGATGCTATGCAGCCATTTCACACCAGCTCGCCCCA...ACACACACACACACACACACACACACACACACACTCAAAATAGGAAAGGTAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACATGCATACCATGGCGGTGTGTTTCCTCATGTaGAGCGTAAGAGAAGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCVCVYMHTMAVCFLM*SVREEI Trigger: GATCTCTTCTCTTACGCTTCACATGAGGAAACACAC...CGCCATGGTATGCATGTACACACACACACACACACACACACACACACACACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTACATGCATACCATGGCGTGCCATTGGAGGTCAGAGGACATTCAAAGAGACTGTaGATGGAAGGAATGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVHAYHGVPLEVRGHSKRL*MEGMES Trigger: AGACTCCATTCCTTCCATGCACAGTCTCTTTGAATG...TCCTCTGACCTCCAATGGCACGCCATGGTATGCATGTACACACACACACACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| CDS-3UTR CCA 90 bp | TTTTACCTTTCCTATTTTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCTTCTCCCCTGTGTaGCCCCTCATATGCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FYLSYFECVCVCVCVCVCGFSPV*PLICRA Trigger: TGCTCTGCATATGAGGGGCCACACAGGGGAGAAGCC...ACACACACACACACACACACACACACACACACACTCAAAATAGGAAAGGTAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| CDS-3UTR TCA 90 bp | TATCAGTGGGGCCGTCTCACCAGCCTGAGGGAATCTGTATATCTTTGTTTAAGACTCTCATATGCACGATaGGGGACGTTCTTTGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YQWGRLTSLRESVYLCLRLSYAR*GTFFER Trigger: TCTCTCAAAGAACGTCCCTCATCGTGCATATGAGAG...TCTTAAACAAAGATATACAGATTCCCTCAGGCTGGTGAGACGGCCCCACTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| CDS-3UTR GCA 90 bp | TATCAGTGGGGCCGTCTCACCAGCCTGAGGGAATCTGTATATCTTTGTTTAAGACGTAACACTGCTCCCTaGTATGGAGCTTATGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: YQWGRLTSLRESVYLCLRRNTAP*YGAYDG Trigger: ACCATCATAAGCTCCATAGCAGGGAGCAGTGTTACG...TCTTAAACAAAGATATACAGATTCCCTCAGGCTGGTGAGACGGCCCCACTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGAAACTGGTATTATGGCAGCACATGCCTGCAAACCCAGCACTCAGAAGGTTGCTTCCATTCTTCTTaGGTAAAATCAATGGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: SRNWYYGSTCLQTQHSEGCFHSS*VKSMAT Trigger: CGTGGCCATTGATTTTACCCAAGAAGAATGGAAGCA...ACCTTCTGAGTGCTGGGTTTGCAGGCATGTGCTGCCATAATACCAGTTTCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
||
| CDS-3UTR CCA 90 bp | TATCAGTGGGGCCGTCTCACCAGCCTGAGGGAATCTGTATATCTTTGTTTAAGAATCAGCTTCTCCTTGTaGCTAAAGCCTTTCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: YQWGRLTSLRESVYLCLRISFSL*LKPFPH Trigger: GTGTGGGAAAGGCTTTAGCCACAAGGAGAAGCTGAT...TCTTAAACAAAGATATACAGATTCCCTCAGGCTGGTGAGACGGCCCCACTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| CDS-3UTR TCA 90 bp | CTTCGACTGCAGCCCAAACGCAACGGGACCTTACATTTTAAATTGAGAGTCAATCTATATAGGTTCCGCTaGGTAGGATCCAGTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRLQPKRNGTLHFKLRVNLYRFR*VGSSCF Trigger: GAAGCAACTGGATCCTACTCAGCGGAACCTATATAG...ATTGACTCTCAATTTAAAATGTAAGGTCCCGTTGCGTTTGGGCTGCAGTCGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
||
| CDS-3UTR GCA 90 bp | TTAGACTTTCTTCCCGACACATACATTATCATTCAAAACCTACTTCCCCATAGTGTGTGGCCCCTCATATaGAGAGCAAGGGAAGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: LDFLPDTYIIIQNLLPHSVWPLI*RAREAT Trigger: CGTGGCTTCCCTTGCTCTGCATATGAGGGGCCACAC...ACTATGGGGAAGTAGGTTTTGAATGATAATGTATGTGTCGGGAAGAAAGTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| CDS-3UTR CCA 90 bp | TATCAGTGGGGCCGTCTCACCAGCCTGAGGGAATCTGTATATCTTTGTTTAAGATGCTTCCATTCTTCTTaGGTAAAATCAATGGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: YQWGRLTSLRESVYLCLRCFHSS*VKSMAT Trigger: CGTGGCCATTGATTTTACCCAAGAAGAATGGAAGCA...TCTTAAACAAAGATATACAGATTCCCTCAGGCTGGTGAGACGGCCCCACTGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| CDS-3UTR GCA 90 bp | TTTTACCTTTCCTATTTTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGGCCTCTCATATaGACGATGAGGGACGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FYLSYFECVCVCVCVCVCVWPLI*TMRDVL Trigger: AAGAACGTCCCTCATCGTGCATATGAGAGGCCATAC...ACACACACACACACACACACACACACACACACACTCAAAATAGGAAAGGTAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| CDS-3UTR CCA 90 bp | CTTCGACTGCAGCCCAAACGCAACGGGACCTTACATTTTAAATTGAGAGTCAATTGCTTCCATTCTTCTTaGGTAAAATCAATGGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: LRLQPKRNGTLHFKLRVNCFHSS*VKSMAT Trigger: CGTGGCCATTGATTTTACCCAAGAAGAATGGAAGCA...ATTGACTCTCAATTTAAAATGTAAGGTCCCGTTGCGTTTGGGCTGCAGTCGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
||
| CDS-3UTR CCA 90 bp | TTTTACCTTTCCTATTTTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCAAAGAGACTGTGCATaGAAGGAATGGAGTCTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: FYLSYFECVCVCVCVCVCQRDCA*KEWSLR Trigger: ACGCAGACTCCATTCCTTCCATGCACAGTCTCTTTG...ACACACACACACACACACACACACACACACACACTCAAAATAGGAAAGGTAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| CDS-3UTR GCA 90 bp | AATCTGGGAACATTTATAGATAGATCTTTGCAGACATACATGGATACTTCTGAGGTGTGGATCCTCTGGTaGCTGACAAGGTTTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: NLGTFIDRSLQTYMDTSEVWILW*LTRFDI Trigger: GATGTCAAACCTTGTCAGGCACCAGAGGATCCACAC...CTCAGAAGTATCCATGTATGTCTGCAAAGATCTATCTATAAATGTTCCCAGATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| CDS-3UTR CCA 90 bp | ATTGCCTTTTGTTTTTCTACTACTTTCAACTGGGAAAGGAGCTATGTTGAAGATTTTGGGGACCTTCTTTaGGGGAAACATCCCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: IAFCFSTTFNWERSYVEDFGDLL*GKHPRS Trigger: GGATCTGGGATGTTTCCCCCAAAGAAGGTCCCCAAA...ATCTTCAACATAGCTCCTTTCCCAGTTGAAAGTAGTAGAAAAACAAAAGGCAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
||
| CDS-3UTR TCA 90 bp | TGTCACCTAATTACCTTAGACTTTCTTCCCGACACATACATTATCATTCAAAACCTATATAGGTTCCGCTaGGTAGGATCCAGTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CHLITLDFLPDTYIIIQNLYRFR*VGSSCF Trigger: GAAGCAACTGGATCCTACTCAGCGGAACCTATATAG...GTTTTGAATGATAATGTATGTGTCGGGAAGAAAGTCTAAGGTAATTAGGTGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
||
| CDS-3UTR TCA 90 bp | AATCTGGGAACATTTATAGATAGATCTTTGCAGACATACATGGATACTTCTGAGATGAGCATGGAAAACTaGGAGAAGGCTTTCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: NLGTFIDRSLQTYMDTSEMSMEN*EKAFPH Trigger: GTGTGGGAAAGCCTTCTCTCAGTTTTCCATGCTCAT...CTCAGAAGTATCCATGTATGTCTGCAAAGATCTATCTATAAATGTTCCCAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| CDS-3UTR GCA 90 bp | AATCTGGGAACATTTATAGATAGATCTTTGCAGACATACATGGATACTTCTGAGGGAAGGAATGGAGTCTaGGTTTGGGAAAAACGTACT | + |
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Preference number: 4 (lower is better) Translates to: NLGTFIDRSLQTYMDTSEGRNGV*VWEKRT Trigger: AGTACGTTTTTCCCAAACGCAGACTCCATTCCTTCC...CTCAGAAGTATCCATGTATGTCTGCAAAGATCTATCTATAAATGTTCCCAGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR CAA 72 bp | CAAGCCACAAATCTGGGAACATTTATAGATAGATCTTaGCAGACATACATGGATACTTCTGAGTCCAGTACA | + |
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Preference number: 4 (lower is better) Translates to: QATNLGTFIDRS*QTYMDTSESST Trigger: TGTACTGGACTCAGAAGTATCCATGTATGTCTGCAAAGATCTATCTATAAATGTTCCCAGATTTGTGGCTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| CDS-3UTR CCA 90 bp | TTAGACTTTCTTCCCGACACATACATTATCATTCAAAACCTACTTCCCCATAGTCGAGTATGGATTTTCTaGTGGGTGATGAAGTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: LDFLPDTYIIIQNLLPHSRVWIF*WVMKFF Trigger: GAAAAACTTCATCACCCACCAGAAAATCCATACTCG...ACTATGGGGAAGTAGGTTTTGAATGATAATGTATGTGTCGGGAAGAAAGTCTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| 3UTR CAA 72 bp | CTCTTGCTTAATACATCAGCAAGGAGCTCGAGTTCGTaGATTGACAGTAGATATTTTCTTTCAGACTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: LLLNTSARSSSS*IDSRYFLSDLK Trigger: TTTCAAGTCTGAAAGAAAATATCTACTGTCAATCAACGAACTCGAGCTCCTTGCTGATGTATTAAGCAAGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| CDS-3UTR GCA 90 bp | ATTGCCTTTTGTTTTTCTACTACTTTCAACTGGGAAAGGAGCTATGTTGAAGATAGATCCAACCATAATTaGAAATTCCTCCGGACATTC | + |
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Preference number: 4 (lower is better) Translates to: IAFCFSTTFNWERSYVEDRSNHN*KFLRTF Trigger: GAATGTCCGGAGGAATTTGCAATTATGGTTGGATCT...ATCTTCAACATAGCTCCTTTCCCAGTTGAAAGTAGTAGAAAAACAAAAGGCAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
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| 3UTR CAA 72 bp | AGTTCGTTGATTGACAGTAGATATTTTCTTTCAGACTaGAAAGAGAATACTGATATCACTGGGTGTTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: SSLIDSRYFLSD*KENTDITGCLV Trigger: CACCAAACACCCAGTGATATCAGTATTCTCTTTCAAGTCTGAAAGAAAATATCTACTGTCAATCAACGAACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| CDS-3UTR CAA 90 bp | GGTATCGTAGTCAGCTGTGAAGCTTGGCAGCAAACCCCTATCAGTGGGGCCGTCATGTGCGACAAGGCTTaGTTTCTGGCTGAAGGATTT | + |
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Preference number: 5 (lower is better) Translates to: GIVVSCEAWQQTPISGAVMCDKA*FLAEGF Trigger: AAATCCTTCAGCCAGAAACAAAGCCTTGTCGCACAT...GACGGCCCCACTGATAGGGGTTTGCTGCCAAGCTTCACAGCTGACTACGATACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTACATGCATACCATGGCGTGCCATTGGAGGTCAGAGGAATGAGATTTGACATCTaGATGAAAGTCTTCCCGCAC | + |
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Preference number: 5 (lower is better) Translates to: CVCVCVHAYHGVPLEVRGMRFDI*MKVFPH Trigger: GTGCGGGAAGACTTTCATCAAGATGTCAAATCTCAT...TCCTCTGACCTCCAATGGCACGCCATGGTATGCATGTACACACACACACACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| CDS GCA 90 bp | TTGGGCTCTAAACACTCTCCAACACCGTCACATTCAAAGAGACTGTaGATGGAAGGAATGGAGTCTGCGTTTGGGAAAAACGTACTTGCA | + |
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Preference number: 5 (lower is better) Translates to: LGSKHSPTPSHSKRL*MEGMESAFGKNVLA Trigger: TGCAAGTACGTTTTTCCCAAACGCAGACTCCATTCCTTCCATGCACAGTCTCTTTGAATGTGACGGTGTTGGAGAGTGTTTAGAGCCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032797.9 ENSMUST00000108205.9 |
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| CDS-3UTR CAA 90 bp | TATCAGTGGGGCCGTCTCACCAGCCTGAGGGAATCTGTATATCTTTGTTTAAGACTTCTCATGTGTAAGTaGAGTAGTGAGCACTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: YQWGRLTSLRESVYLCLRLLMCK*SSEHWE Trigger: CTCCCAGTGCTCACTACTCAACTTACACATGAGAAG...TCTTAAACAAAGATATACAGATTCCCTCAGGCTGGTGAGACGGCCCCACTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| CDS-3UTR CAA 90 bp | CTTCTCTTGCTTAATACATCAGCAAGGAGCTCGAGTTCGTTGATTGACAGTAGATTGATCAGCTTCTCCTaGTGGCTAAAGCCTTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: LLLLNTSARSSSSLIDSRLISFS*WLKPFP Trigger: TGGGAAAGGCTTTAGCCACAAGGAGAAGCTGATCAA...TCTACTGTCAATCAACGAACTCGAGCTCCTTGCTGATGTATTAAGCAAGAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| CDS-3UTR CAA 90 bp | CTTCTCTTGCTTAATACATCAGCAAGGAGCTCGAGTTCGTTGATTGACAGTAGACTCTGGCAACGGGTATaGTACATCATCATCACCAAA | + |
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Preference number: 5 (lower is better) Translates to: LLLLNTSARSSSSLIDSRLWQRV*YIIITK Trigger: TTTGGTGATGATGATGTACAATACCCGTTGCCAGAG...TCTACTGTCAATCAACGAACTCGAGCTCCTTGCTGATGTATTAAGCAAGAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| CDS-3UTR CAA 90 bp | CTTCTCTTGCTTAATACATCAGCAAGGAGCTCGAGTTCGTTGATTGACAGTAGATCATCATCACCAAAATaGGGCTCTAAACACTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: LLLLNTSARSSSSLIDSRSSSPK*GSKHSP Trigger: TGGAGAGTGTTTAGAGCCCAATTTTGGTGATGATGA...TCTACTGTCAATCAACGAACTCGAGCTCCTTGCTGATGTATTAAGCAAGAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| CDS-3UTR CAA 90 bp | AATCTGGGAACATTTATAGATAGATCTTTGCAGACATACATGGATACTTCTGAGCCTTTTCCACAATGGTaGCACTTAAAGGGGGTCAGC | + |
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Preference number: 5 (lower is better) Translates to: NLGTFIDRSLQTYMDTSEPFPQW*HLKGVS Trigger: GCTGACCCCCTTTAAGTGCAACCATTGTGGAAAAGG...CTCAGAAGTATCCATGTATGTCTGCAAAGATCTATCTATAAATGTTCCCAGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108205.9 |
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| CDS GCA 72 bp | GGAAGGAATGGAGTCTGCGTTTGGGAAAAACGTACTTaGAAATTCCTCCGGACATTCGCTGGCTTCACTCGT | + |
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Preference number: 6 (lower is better) Translates to: GRNGVCVWEKRT*KFLRTFAGFTR Trigger: ACGAGTGAAGCCAGCGAATGTCCGGAGGAATTTGCAAGTACGTTTTTCCCAAACGCAGACTCCATTCCTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032797.9 ENSMUST00000108205.9 |
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| CDS CAA 72 bp | TGGAAGGAATGGAGTCTGCGTTTGGGAAAAACGTACTaGCAAATTCCTCCGGACATTCGCTGGCTTCACTCG | + |
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Preference number: 6 (lower is better) Translates to: WKEWSLRLGKTY*QIPPDIRWLHS Trigger: CGAGTGAAGCCAGCGAATGTCCGGAGGAATTTGCAAGTACGTTTTTCCCAAACGCAGACTCCATTCCTTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032797.9 ENSMUST00000108205.9 |
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| CDS GCA 72 bp | CTTCTTTGGGGGAAACATCCCAGATCCAACCATAATTaGAAATTCCTCCGGACATTCGCTGGCTTCACTCGT | + |
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Preference number: 6 (lower is better) Translates to: LLWGKHPRSNHN*KFLRTFAGFTR Trigger: ACGAGTGAAGCCAGCGAATGTCCGGAGGAATTTGCAATTATGGTTGGATCTGGGATGTTTCCCCCAAAGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108211.8 ENSMUST00000108212.8 |
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| CDS CCA 72 bp | ACTCTCCAACACCGTCACATTCAAAGAGACTGTGCATaGAAGGAATGGAGTCTGCGTTTGGGAAAAACGTAC | + |
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Preference number: 6 (lower is better) Translates to: TLQHRHIQRDCA*KEWSLRLGKTY Trigger: GTACGTTTTTCCCAAACGCAGACTCCATTCCTTCCATGCACAGTCTCTTTGAATGTGACGGTGTTGGAGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032797.9 ENSMUST00000108205.9 |
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| CDS GCA 72 bp | ACATTCAAAGAGACTGTGCATGGAAGGAATGGAGTCTaGGTTTGGGAAAAACGTACTTGCAAATTCCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: TFKETVHGRNGV*VWEKRTCKFLR Trigger: CCGGAGGAATTTGCAAGTACGTTTTTCCCAAACGCAGACTCCATTCCTTCCATGCACAGTCTCTTTGAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032797.9 ENSMUST00000108205.9 |
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| CDS GCA 72 bp | AAACACTCTCCAACACCGTCACATTCAAAGAGACTGTaGATGGAAGGAATGGAGTCTGCGTTTGGGAAAAAC | + |
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Preference number: 6 (lower is better) Translates to: KHSPTPSHSKRL*MEGMESAFGKN Trigger: GTTTTTCCCAAACGCAGACTCCATTCCTTCCATGCACAGTCTCTTTGAATGTGACGGTGTTGGAGAGTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032797.9 ENSMUST00000108205.9 |
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| CDS CCA 72 bp | CTGGCAACGGGTATTGTACATCATCATCACCAAAATTaGGCTCTAAACACTCTCCAACACCGTCACATTCAA | + |
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Preference number: 6 (lower is better) Translates to: LATGIVHHHHQN*ALNTLQHRHIQ Trigger: TTGAATGTGACGGTGTTGGAGAGTGTTTAGAGCCCAATTTTGGTGATGATGATGTACAATACCCGTTGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032797.9 ENSMUST00000108205.9 |
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