RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ZFP738 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000048280

Ensembl transcript IDs: ENSMUST00000125495.10, ENSMUST00000137496.10, ENSMUST00000175678.2

Found 198 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGAGACAGAGCACTGCCTGCCTCACAGGAGGCCTGCTCTAACCTaGGACACACAGTTCACCCTGGTTCCAGTGAGGCCTGCCCCAATC +
Preference number: 1 (lower is better)
Translates to: PETEHCLPHRRPALT*DTQFTLVPVRPAPI
Trigger: GATTGGGGCAGGCCTCACTGGAACCAGGGTGAACTGTGTGTCCCAGGTTAGAGCAGGCCTCCTGTGAGGCAGGCAGTGCTCTGTCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR GCA 90 bp CCTGGTGTAACCAGAGACAGAGCACTGCCTGCCTCACAGGAGGCCTaGTCTAACCTGGGACACACAGTTCACCCTGGTTCCAGTGAGGCC +
Preference number: 1 (lower is better)
Translates to: PGVTRDRALPASQEA*SNLGHTVHPGSSEA
Trigger: GGCCTCACTGGAACCAGGGTGAACTGTGTGTCCCAGGTTAGAGCAGGCCTCCTGTGAGGCAGGCAGTGCTCTGTCTCTGGTTACACCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 90 bp GGGGTGGGGCCAGATCAAGCCAGGTTGGAGCAAGCAGGGCCAGAGTaGGCAGAAGCCCTAATTCCAATTCCCAGCAACCACATGATGGCT +
Preference number: 1 (lower is better)
Translates to: GVGPDQARLEQAGPE*AEALIPIPSNHMMA
Trigger: AGCCATCATGTGGTTGCTGGGAATTGGAATTAGGGCTTCTGCTCACTCTGGCCCTGCTTGCTCCAACCTGGCTTGATCTGGCCCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR GCA 90 bp CTCACCAAGGCTGACCTGGCTACAGCTGCTGCTGGATGCCACATCTaGCATCACCAGAGACCAAAACTGAGCCCCAGATGTAGCACCATT +
Preference number: 1 (lower is better)
Translates to: LTKADLATAAAGCHI*HHQRPKLSPRCSTI
Trigger: AATGGTGCTACATCTGGGGCTCAGTTTTGGTCTCTGGTGATGGCAGATGTGGCATCCAGCAGCAGCTGTAGCCAGGTCAGCCTTGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR GCA 90 bp GGTAATTCACTCACCAAGGCTGACCTGGCTACAGCTGCTGCTGGATaGCACATCTGCCATCACCAGAGACCAAAACTGAGCCCCAGATGT +
Preference number: 1 (lower is better)
Translates to: GNSLTKADLATAAAG*HICHHQRPKLSPRC
Trigger: ACATCTGGGGCTCAGTTTTGGTCTCTGGTGATGGCAGATGTGGCATCCAGCAGCAGCTGTAGCCAGGTCAGCCTTGGTGAGTGAATTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 90 bp CATCACCAGAGACCAAAACTGAGCCCCAGATGTAGCACCATTCACTaGAGTGACCAGCCAGCAATACATTGGAGAGCTTCTTCCATGGGA +
Preference number: 1 (lower is better)
Translates to: HHQRPKLSPRCSTIH*SDQPAIHWRASSMG
Trigger: TCCCATGGAAGAAGCTCTCCAATGTATTGCTGGCTGGTCACTTCAGTGAATGGTGCTACATCTGGGGCTCAGTTTTGGTCTCTGGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 90 bp AAAGAAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATaGACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGC +
Preference number: 1 (lower is better)
Translates to: KEAKGICNPIGGTTL*TNQYPGALDSSCIC
Trigger: GCATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 90 bp TCCTGGACACCCAGACCAGTTAACACCAAACAACCAGATGGCAAATaGAAAGCAGAAGAACATAACTCACAGGAGGCATTGCAATTTGGC +
Preference number: 1 (lower is better)
Translates to: SWTPRPVNTKQPDGK*KAEEHNSQEALQFG
Trigger: GCCAAATTGCAATGCCTCCTGTGAGTTATGTTCTTCTGCTTTTCATTTGCCATCTGGTTGTTTGGTGTTAACTGGTCTGGGTGTCCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 90 bp TTGCTTTTTGATAGAGCACACTATGGATTGCTGTTGATATGCAGGTaGGGGCCAGTGAAATATAAGGCTAGAGTCTGTGAATGGGCAGTG +
Preference number: 1 (lower is better)
Translates to: LLFDRAHYGLLLICR*GPVKYKARVCEWAV
Trigger: CACTGCCCATTCACAGACTCTAGCCTTATATTTCACTGGCCCTCACCTGCATATCAACAGCAATCCATAGTGTGCTCTATCAAAAAGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR GCA 90 bp AGGGCAACAGATCTCATTATAGGTGGTTGTGAACCATTATGTGGTTaGTTGGATTTGAACTCAGGACCATTTGGAAGAGCAGTCAGTGCT +
Preference number: 1 (lower is better)
Translates to: RATDLIIGGCEPLCG*LDLNSGPFGRAVSA
Trigger: AGCACTGACTGCTCTTCCAAATGGTCCTGAGTTCAAATCCAAGCAACCACATAATGGTTCACAACCACCTATAATGAGATCTGTTGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR GCA 90 bp CAGATGGCAAATGAAAAGCAGAAGAACATAACTCACAGGAGGCATTaGAATTTGGCACCATCAGGACCCAGTTCTCCTATTACAGCAATC +
Preference number: 1 (lower is better)
Translates to: QMANEKQKNITHRRH*NLAPSGPSSPITAI
Trigger: GATTGCTGTAATAGGAGAACTGGGTCCTGATGGTGCCAAATTGCAATGCCTCCTGTGAGTTATGTTCTTCTGCTTTTCATTTGCCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CCA 90 bp AATGGAATGCCAATGACTCAGGCTCTAAGATCAACAATTGACAGATaGGGCCTCAGGAAACTGAAAAGCTTCTGTAAGGCAAAGGACAGT +
Preference number: 1 (lower is better)
Translates to: NGMPMTQALRSTIDR*GLRKLKSFCKAKDS
Trigger: ACTGTCCTTTGCCTTACAGAAGCTTTTCAGTTTCCTGAGGCCCCATCTGTCAATTGTTGATCTTAGAGCCTGAGTCATTGGCATTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 90 bp ATCATGGAATCCACTGGTCTTACCTTGTACACCACCATCCTGAAGTaGGATGACATGACAGAGAAATGGAATGTCCTTTTGAAGACACAG +
Preference number: 1 (lower is better)
Translates to: IMESTGLTLYTTILK*DDMTEKWNVLLKTQ
Trigger: CTGTGTCTTCAAAAGGACATTCCATTTCTCTGTCATGTCATCTCACTTCAGGATGGTGGTGTACAAGGTAAGACCAGTGGATTCCATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CCA 90 bp ACGGAATCTCATAGAAGAGAAAGTAGGAAAGAGCCTAGAACTCATTaGTACAGGGGAAATTTCCTGAATGGAATGCCAATGACTCAGGCT +
Preference number: 1 (lower is better)
Translates to: TESHRRESRKEPRTH*YRGNFLNGMPMTQA
Trigger: AGCCTGAGTCATTGGCATTCCATTCAGGAAATTTCCCCTGTACCAATGAGTTCTAGGCTCTTTCCTACTTTCTCTTCTATGAGATTCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 90 bp ACCCAGGAAAGATCAGCCCCAAATCCAGAGAACAAACATACAATCTaGCAGCTCTACTTTTGGCATGATTGTGTGAATGATTCCAAAGTC +
Preference number: 1 (lower is better)
Translates to: TQERSAPNPENKHTI*QLYFWHDCVNDSKV
Trigger: GACTTTGGAATCATTCACACAATCATGCCAAAAGTAGAGCTGTCAGATTGTATGTTTGTTCTCTGGATTTGGGGCTGATCTTTCCTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 90 bp CAATCTTGTTTAGTAAATCAATTCCCAGCCATCCCTGCCATTGCTTaGTGTACACATGAACAAAGTGGCCATGTTGGCAAGATGTGTTCA +
Preference number: 1 (lower is better)
Translates to: QSCLVNQFPAIPAIA*CTHEQSGHVGKMCS
Trigger: TGAACACATCTTGCCAACATGGCCACTTTGTTCATGTGTACATCAAGCAATGGCAGGGATGGCTGGGAATTGATTTACTAAACAAGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 90 bp AAAATATACCTTCCTCTCAGCACCTCATATAACCTTCTCCAAAACTaGCCATACATCTGGACACAGAACAAGCCGCAACAGATACAAGAA +
Preference number: 1 (lower is better)
Translates to: KIYLPLSTSYNLLQN*PYIWTQNKPQQIQE
Trigger: TTCTTGTATCTGTTGCGGCTTGTTCTGTGTCCAGATGTATGGTCAGTTTTGGAGAAGGTTATATGAGGTGCTGAGAGGAAGGTATATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 90 bp CCATACATCTGGACACAGAACAAGCCGCAACAGATACAAGAATATTaGAACAAACCATGCATTCTATCAAACTACCACAGAACAAGGTTG +
Preference number: 1 (lower is better)
Translates to: PYIWTQNKPQQIQEY*NKPCILSNYHRTRL
Trigger: CAACCTTGTTCTGTGGTAGTTTGATAGAATGCATGGTTTGTTTCAATATTCTTGTATCTGTTGCGGCTTGTTCTGTGTCCAGATGTATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 90 bp TTTAATAATTACAACACTATGAAAGCTCACAGTCCATGTGTCACATaGCACTCAAGGCAATCTCTTTGTGTGAGCTCTTACAACATAAGA +
Preference number: 1 (lower is better)
Translates to: FNNYNTMKAHSPCVT*HSRQSLCVSSYNIR
Trigger: TCTTATGTTGTAAGAGCTCACACAAAGAGATTGCCTTGAGTGTCATGTGACACATGGACTGTGAGCTTTCATAGTGTTGTAATTATTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CCA 90 bp AAAATAGATCCCTATTCATCACCTTGTACAAAGTTCAAGTCCAAGTaGATCAAGGACCTCAACATAAAACCAGATATACGGAATCTCATA +
Preference number: 1 (lower is better)
Translates to: KIDPYSSPCTKFKSK*IKDLNIKPDIRNLI
Trigger: TATGAGATTCCGTATATCTGGTTTTATGTTGAGGTCCTTGATCCACTTGGACTTGAACTTTGTACAAGGTGATGAATAGGGATCTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CCA 90 bp ATCAGAGTTAAAGACTACTTAGAAATAACAGATCTTTGGCTGTCCTaGGGAACACAAGTTAATATCATGGTGGAAGAAAACAAAGCTTAT +
Preference number: 1 (lower is better)
Translates to: IRVKDYLEITDLWLS*GTQVNIMVEENKAY
Trigger: ATAAGCTTTGTTTTCTTCCACCATGATATTAACTTGTGTTCCCCAGGACAGCCAAAGATCTGTTATTTCTAAGTAGTCTTTAACTCTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000125495.10
ENSMUST00000175678.2
3UTR-3UTR TCA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAATCACCCTGGTTCCAGTaGGGCCTGCCCCAATCCTGG +
Preference number: 2 (lower is better)
Translates to: VSPIAGNHGSRNQGVERESPWFQ*GLPQSW
Trigger: CCAGGATTGGGGCAGGCCTCACTGGAACCAGGGTGA...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp AAGAGAAAGAGGGGTGGGGCCAGATCAAGCCAGGTTGGAGCAAGCAGGGCCAGACTAGCAAACAGTCCCTaGACCAAGCTAGAGTGGCAA +
Preference number: 2 (lower is better)
Translates to: KRKRGGARSSQVGASRARLANSP*TKLEWQ
Trigger: TTGCCACTCTAGCTTGGTTCAGGGACTGTTTGCTAG...TCTGGCCCTGCTTGCTCCAACCTGGCTTGATCTGGCCCCACCCCTCTTTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR GCA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAACCAGAGACAGAGCACTaGCTGCCTCACAGGAGGCCT +
Preference number: 2 (lower is better)
Translates to: VSPIAGNHGSRNQGVEREPETEH*LPHRRP
Trigger: AGGCCTCCTGTGAGGCAGGCAGTGCTCTGTCTCTGG...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp AAGAGAAAGAGGGGTGGGGCCAGATCAAGCCAGGTTGGAGCAAGCAGGGCCAGAAGTACTGACGGAAAATaGAAGGCCTTGCCACATTCC +
Preference number: 2 (lower is better)
Translates to: KRKRGGARSSQVGASRARSTDGK*KALPHS
Trigger: GGAATGTGGCAAGGCCTTCCATTTTCCGTCAGTACT...TCTGGCCCTGCTTGCTCCAACCTGGCTTGATCTGGCCCCACCCCTCTTTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAACAAGCAGGGCCAGAGTaGGCAGAAGCCCTAATTCCA +
Preference number: 2 (lower is better)
Translates to: VSPIAGNHGSRNQGVEREQAGPE*AEALIP
Trigger: TGGAATTAGGGCTTCTGCTCACTCTGGCCCTGCTTG...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp AAGAGAAAGAGGGGTGGGGCCAGATCAAGCCAGGTTGGAGCAAGCAGGGCCAGATCACCTTTAGATGGATaGAATAGGCAGAGCTCCTAC +
Preference number: 2 (lower is better)
Translates to: KRKRGGARSSQVGASRARSPLDG*NRQSSY
Trigger: GTAGGAGCTCTGCCTATTCCATCCATCTAAAGGTGA...TCTGGCCCTGCTTGCTCCAACCTGGCTTGATCTGGCCCCACCCCTCTTTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR GCA 90 bp AAGAGAAAGAGGGGTGGGGCCAGATCAAGCCAGGTTGGAGCAAGCAGGGCCAGACCGGTGTTCAGATCATaGTTTGGAACTTCTGATGTA +
Preference number: 2 (lower is better)
Translates to: KRKRGGARSSQVGASRARPVFRS*FGTSDV
Trigger: TACATCAGAAGTTCCAAAGCATGATCTGAACACCGG...TCTGGCCCTGCTTGCTCCAACCTGGCTTGATCTGGCCCCACCCCTCTTTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTGGCCTGCCCCAATCCTaGACACCCAGACCAGTTAAC +
Preference number: 2 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSGLPQS*TPRPVN
Trigger: GTTAACTGGTCTGGGTGTCCAGGATTGGGGCAGGCC...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAACCAGGACAGCACAATTaGAAGTGCAGCCAGTTCTCT +
Preference number: 2 (lower is better)
Translates to: VSPIAGNHGSRNQGVEREPGQHN*KCSQFS
Trigger: AGAGAACTGGCTGCACTTTCAATTGTGCTGTCCTGG...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTGGGTGGTGCTGGTGCTaGCTATGTTGTGGAGTCTAC +
Preference number: 2 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSGWCWC*LCCGVY
Trigger: GTAGACTCCACAACATAGTCAGCACCAGCACCACCC...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR GCA 90 bp AAGAGAAAGAGGGGTGGGGCCAGATCAAGCCAGGTTGGAGCAAGCAGGGCCAGAAATTCTGAACATTGTTaGCACAAATGCAAGGGTACC +
Preference number: 2 (lower is better)
Translates to: KRKRGGARSSQVGASRARNSEHC*HKCKGT
Trigger: GGTACCCTTGCATTTGTGGCAACAATGTTCAGAATT...TCTGGCCCTGCTTGCTCCAACCTGGCTTGATCTGGCCCCACCCCTCTTTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR GCA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAAAGTGTGGATTTGACATaGCACCTGGAGAAACCTGCC +
Preference number: 2 (lower is better)
Translates to: VSPIAGNHGSRNQGVERESVDLT*HLEKPA
Trigger: GGCAGGTTTCTCCAGGTGGCATGTCAAATCCACACT...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR GCA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAACCAGAACTTCATCCCTaGATCAACTGGTGCTGGCAA +
Preference number: 2 (lower is better)
Translates to: VSPIAGNHGSRNQGVEREPELHP*INWCWQ
Trigger: TTGCCAGCACCAGTTGATGCAGGGATGAAGTTCTGG...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp AAGAGAAAGAGGGGTGGGGCCAGATCAAGCCAGGTTGGAGCAAGCAGGGCCAGAAGGAATCAAAAGAGATaGGGAAGGACACTTCATACT +
Preference number: 2 (lower is better)
Translates to: KRKRGGARSSQVGASRARRNQKR*GRTLHT
Trigger: AGTATGAAGTGTCCTTCCCCATCTCTTTTGATTCCT...TCTGGCCCTGCTTGCTCCAACCTGGCTTGATCTGGCCCCACCCCTCTTTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTCCCTCTGGAAAGGGGTaGTGTAATGGCTATGGGGCT +
Preference number: 2 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSPSGKG*CNGYGA
Trigger: AGCCCCATAGCCATTACACCACCCCTTTCCAGAGGG...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp AAGAGAAAGAGGGGTGGGGCCAGATCAAGCCAGGTTGGAGCAAGCAGGGCCAGAAACAAACATACAATCTaGCAGCTCTACTTTTGGCAT +
Preference number: 2 (lower is better)
Translates to: KRKRGGARSSQVGASRARNKHTI*QLYFWH
Trigger: ATGCCAAAAGTAGAGCTGTCAGATTGTATGTTTGTT...TCTGGCCCTGCTTGCTCCAACCTGGCTTGATCTGGCCCCACCCCTCTTTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp AAGAGAAAGAGGGGTGGGGCCAGATCAAGCCAGGTTGGAGCAAGCAGGGCCAGACAATATCAATTGCTCTaGGTTGATTGTGTAGACGTT +
Preference number: 2 (lower is better)
Translates to: KRKRGGARSSQVGASRARQYQLL*VDCVDV
Trigger: AACGTCTACACAATCAACTCAGAGCAATTGATATTG...TCTGGCCCTGCTTGCTCCAACCTGGCTTGATCTGGCCCCACCCCTCTTTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp AAGAGAAAGAGGGGTGGGGCCAGATCAAGCCAGGTTGGAGCAAGCAGGGCCAGATATCAGAATGACACATaGCTTCTCAACAGATACTCT +
Preference number: 2 (lower is better)
Translates to: KRKRGGARSSQVGASRARYQNDT*LLNRYS
Trigger: AGAGTATCTGTTGAGAAGTCATGTGTCATTCTGATA...TCTGGCCCTGCTTGCTCCAACCTGGCTTGATCTGGCCCCACCCCTCTTTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTCTCGGTCTCCAACACTaGGCATCTCCATCCCAGTTA +
Preference number: 2 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSLGLQH*ASPSQL
Trigger: TAACTGGGATGGAGATGCTCAGTGTTGGAGACCGAG...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAACTGTTGATATGCAGGTaGGGGCCAGTGAAATATAAG +
Preference number: 2 (lower is better)
Translates to: VSPIAGNHGSRNQGVERELLICR*GPVKYK
Trigger: CTTATATTTCACTGGCCCTCACCTGCATATCAACAG...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTACACCCAAGAGGAGTTaGTGGCCGGAAAGAGGTAAA +
Preference number: 2 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSTPKRS*WPERGK
Trigger: TTTACCTCTTTCCGGCCATCAACTCCTCTTGGGTGT...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR GCA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTGGCTGCCTTCTGTTCTaGAGCTACAAAGTGGAGACT +
Preference number: 2 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSGCLLF*SYKVET
Trigger: AGTCTCCACTTTGTAGCTGCAGAACAGAAGGCAGCC...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp AAGAGAAAGAGGGGTGGGGCCAGATCAAGCCAGGTTGGAGCAAGCAGGGCCAGATGTGTAGACGTTTTGTaGGTTGAAATTTTGCTGTTA +
Preference number: 2 (lower is better)
Translates to: KRKRGGARSSQVGASRARCVDVL*VEILLL
Trigger: TAACAGCAAAATTTCAACCCACAAAACGTCTACACA...TCTGGCCCTGCTTGCTCCAACCTGGCTTGATCTGGCCCCACCCCTCTTTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAAAAGAGTGTACGGTTTTaGTACAAAGACAGCCAGGTC +
Preference number: 2 (lower is better)
Translates to: VSPIAGNHGSRNQGVEREKSVRF*YKDSQV
Trigger: GACCTGGCTGTCTTTGTACCAAAACCGTACACTCTT...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CAA 90 bp CACAGTATGTCTTCTGACCAAGAAACACATTTCACACCCAAAGAATaGCCACAGCAGGGCCCCATGATCATGGAATCCACTGGTCTTACC +
Preference number: 2 (lower is better)
Translates to: HSMSSDQETHFTPKE*PQQGPMIMESTGLT
Trigger: GGTAAGACCAGTGGATTCCATGATCATGGGGCCCTGCTGTGGCAATTCTTTGGGTGTGAAATGTGTTTCTTGGTCAGAAGACATACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR GCA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAAGATAATGGAAGGCCTTaGCACATATATCACTTGTGG +
Preference number: 2 (lower is better)
Translates to: VSPIAGNHGSRNQGVEREDNGRP*HIYHLW
Trigger: CCACAAGTGATATATGTGGCAAGGCCTTCCATTATC...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR GCA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAAGACTCTAGCTGCATATaGATCAAAAGATGGCCTAGT +
Preference number: 2 (lower is better)
Translates to: VSPIAGNHGSRNQGVEREDSSCI*IKRWPS
Trigger: ACTAGGCCATCTTTTGATGCATATGCAGCTAGAGTC...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAAAATAGTTCTGGACATTaGAAGTCCTTGCCACATGCT +
Preference number: 2 (lower is better)
Translates to: VSPIAGNHGSRNQGVERENSSGH*KSLPHA
Trigger: AGCATGTGGCAAGGACTTCCAATGTCCAGAACTATT...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTATGCTTGGAAAGTCGTaGGGGATAATGGAAGGCTTT +
Preference number: 2 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSMLGKS*GIMEGF
Trigger: AAAGCCTTCCATTATCCCTCACGACTTTCCAAGCAT...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTAGTCCATGTGTCACATaGCACTCAAGGCAATCTCTT +
Preference number: 2 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSSPCVT*HSRQSL
Trigger: AAGAGATTGCCTTGAGTGTCATGTGACACATGGACT...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAATCAATTGCTCTGAGTTaGTTGTGTAGACGTTTTGTG +
Preference number: 2 (lower is better)
Translates to: VSPIAGNHGSRNQGVERESIALS*LCRRFV
Trigger: CACAAAACGTCTACACAATCAACTCAGAGCAATTGA...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAACAATACAAGGAATCATaGAAACCAAGAGCTGGTTCT +
Preference number: 2 (lower is better)
Translates to: VSPIAGNHGSRNQGVEREQYKES*KPRAGS
Trigger: AGAACCAGCTCTTGGTTTTCATGATTCCTTGTATTG...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTAACCTTCTCCAAAACTaGCCATACATCTGGACACAG +
Preference number: 2 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSNLLQN*PYIWTQ
Trigger: CTGTGTCCAGATGTATGGTCAGTTTTGGAGAAGGTT...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR GCA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTAAACATGGAAGTCCTTaGCACACACTTCACACTGGT +
Preference number: 2 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSKHGSP*HTLHTG
Trigger: ACCAGTGTGAAGTGTGTGGCAAGGACTTCCATGTTT...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR GCA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAACATTGTTGCCACAAATaGAAGGGTACCACATTCATA +
Preference number: 2 (lower is better)
Translates to: VSPIAGNHGSRNQGVEREHCCHK*KGTTFI
Trigger: TATGAATGTGGTACCCTTGCATTTGTGGCAACAATG...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTACACACCGGATGAAGTaGAAAATGCCTACATCACCT +
Preference number: 2 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSTHRMK*KMPTSP
Trigger: AGGTGATGTAGGCATTTTCCACTTCATCCGGTGTGT...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTTCTGCAGCTACAAAGTaGAGACTGTTGCCATCAATG +
Preference number: 2 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSSAATK*RLLPSM
Trigger: CATTGATGGCAACAGTCTCCACTTTGTAGCTGCAGA...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CAA 90 bp GCAAATGAAAAGCAGAAGAACATAACTCACAGGAGGCATTGCAATTaGGCACCATCAGGACCCAGTTCTCCTATTACAGCAATCCCTGGA +
Preference number: 2 (lower is better)
Translates to: ANEKQKNITHRRHCN*APSGPSSPITAIPG
Trigger: TCCAGGGATTGCTGTAATAGGAGAACTGGGTCCTGATGGTGCCAAATTGCAATGCCTCCTGTGAGTTATGTTCTTCTGCTTTTCATTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR GCA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAAAGTAATGGAAGGCCTTaGCTTATAAGTCACAATTGT +
Preference number: 2 (lower is better)
Translates to: VSPIAGNHGSRNQGVERESNGRP*LISHNC
Trigger: ACAATTGTGACTTATAAGGCAAGGCCTTCCATTACT...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAAGGGTTGGTTTGTCTCTaGTATATTTTACTTTTAGTC +
Preference number: 2 (lower is better)
Translates to: VSPIAGNHGSRNQGVEREGLVCL*YILLLV
Trigger: GACTAAAAGTAAAATATACCAGAGACAAACCAACCC...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAATGTAAAGATCTTCCATaGTCATGGATAACAAGGATT +
Preference number: 2 (lower is better)
Translates to: VSPIAGNHGSRNQGVERECKDLP*SWITRI
Trigger: AATCCTTGTTATCCATGACCATGGAAGATCTTTACA...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTACCACAGAACAAGGTTaGATTTCCACAACAACAGAA +
Preference number: 2 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSTTEQG*ISTTTE
Trigger: TTCTGTTGTTGTGGAAATCCAACCTTGTTCTGTGGT...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CAA 90 bp GATCTCATTATAGGTGGTTGTGAACCATTATGTGGTTGCTTGGATTaGAACTCAGGACCATTTGGAAGAGCAGTCAGTGCTCTTAACTGC +
Preference number: 2 (lower is better)
Translates to: DLIIGGCEPLCGCLD*NSGPFGRAVSALNC
Trigger: GCAGTTAAGAGCACTGACTGCTCTTCCAAATGGTCCTGAGTTCAAATCCAAGCAACCACATAATGGTTCACAACCACCTATAATGAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CAA 90 bp GCAACAGATCTCATTATAGGTGGTTGTGAACCATTATGTGGTTGCTaGGATTTGAACTCAGGACCATTTGGAAGAGCAGTCAGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: ATDLIIGGCEPLCGC*DLNSGPFGRAVSAL
Trigger: AAGAGCACTGACTGCTCTTCCAAATGGTCCTGAGTTCAAATCCAAGCAACCACATAATGGTTCACAACCACCTATAATGAGATCTGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CAA 90 bp CCATCCCTGCCATTGCTTGATGTACACATGAACAAAGTGGCCATGTaGGCAAGATGTGTTCATGCTTCGGTTCAAAAACATGGTAATTCA +
Preference number: 2 (lower is better)
Translates to: PSLPLLDVHMNKVAM*ARCVHASVQKHGNS
Trigger: TGAATTACCATGTTTTTGAACCGAAGCATGAACACATCTTGCCAACATGGCCACTTTGTTCATGTGTACATCAAGCAATGGCAGGGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTGATCTTCCATGGTCATaGATAACAAGGATTAACAAG +
Preference number: 2 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSDLPWS*ITRINK
Trigger: CTTGTTAATCCTTGTTATCCATGACCATGGAAGATC...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTAGGTACATACCGAAATaGAACAAAAGCAATGTACAG +
Preference number: 2 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSRYIPK*NKSNVQ
Trigger: CTGTACATTGCTTTTGTTCCATTTCGGTATGTACCT...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATCCCAAGCAAGGACATTaGGAGCAAGTGAGAGGCTCT +
Preference number: 2 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNPKQGH*EQVRGS
Trigger: AGAGCCTCTCACTTGCTCTCAATGTCCTTGCTTGGG...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATGGGGCCTCAGGAAACTaGAAAGCTTCTGTAAGGCAA +
Preference number: 2 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNGASGN*KASVRQ
Trigger: TTGCCTTACAGAAGCTTTTCAGTTTCCTGAGGCCCC...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR GCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATGCTGGATGCCACATCTaGCATCACCAGAGACCAAAA +
Preference number: 2 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNAGCHI*HHQRPK
Trigger: TTTTGGTCTCTGGTGATGGCAGATGTGGCATCCAGC...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATGAAGGACAGAGAAGATaGAGGAAGAGGACCAACCAG +
Preference number: 2 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNEGQRR*RKRTNQ
Trigger: CTGGTTGGTCCTCTTCCTCCATCTTCTCTGTCCTTC...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATCCCACTAATAGCAAATaGGTGGTGCTGGTGCTGACT +
Preference number: 2 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNPTNSK*VVLVLT
Trigger: AGTCAGCACCAGCACCACCCATTTGCTATTAGTGGG...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATGAACTCAGGACCATTTaGAAGAGCAGTCAGTGCTCT +
Preference number: 2 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNELRTI*KSSQCS
Trigger: AGAGCACTGACTGCTCTTCCAAATGGTCCTGAGTTC...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATGTGCTGACTATGTTGTaGAGTCTACGGGTGTCTTCA +
Preference number: 2 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNVLTML*SLRVSS
Trigger: TGAAGACACCCGTAGACTCCACAACATAGTCAGCAC...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CAA 90 bp ACCATACATCTGGACACAGAACAAGCCGCAACAGATACAAGAATATaGAAACAAACCATGCATTCTATCAAACTACCACAGAACAAGGTT +
Preference number: 2 (lower is better)
Translates to: TIHLDTEQAATDTRI*KQTMHSIKLPQNKV
Trigger: AACCTTGTTCTGTGGTAGTTTGATAGAATGCATGGTTTGTTTCAATATTCTTGTATCTGTTGCGGCTTGTTCTGTGTCCAGATGTATGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp GGGAAGGACACTTCATACTCATCAAAAGAAAAATCTACCAGAAGGAAGTTTCAAGGCTTCTCTCCCATATaGATTATCCCGTGTTTAGAT +
Preference number: 2 (lower is better)
Translates to: GKDTSYSSKEKSTRRKFQGFSPI*IIPCLD
Trigger: ATCTAAACACGGGATAATTCATATGGGAGAGAAGCC...TTGAAACTTCCTTCTGGTAGATTTTTCTTTTGATGAGTATGAAGTGTCCTTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATTCTGTGAATGGGCAGTaGAATAGGAAGATGGAGCTA +
Preference number: 2 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNSVNGQ*NRKMEL
Trigger: TAGCTCCATCTTCCTATTTCACTGCCCATTCACAGA...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp GGGAAGGACACTTCATACTCATCAAAAGAAAAATCTACCAGAAGGAAGTTTCAAAGTGATGATGAAACATaGAAGTCCTTGCCACACACT +
Preference number: 2 (lower is better)
Translates to: GKDTSYSSKEKSTRRKFQSDDET*KSLPHT
Trigger: AGTGTGTGGCAAGGACTTCCATGTTTCATCATCACT...TTGAAACTTCCTTCTGGTAGATTTTTCTTTTGATGAGTATGAAGTGTCCTTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp GGGAAGGACACTTCATACTCATCAAAAGAAAAATCTACCAGAAGGAAGTTTCAATCAACAATTGACAGATaGGGCCTCAGGAAACTGAAA +
Preference number: 2 (lower is better)
Translates to: GKDTSYSSKEKSTRRKFQSTIDR*GLRKLK
Trigger: TTTCAGTTTCCTGAGGCCCCATCTGTCAATTGTTGA...TTGAAACTTCCTTCTGGTAGATTTTTCTTTTGATGAGTATGAAGTGTCCTTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATTCAGTATTCCGTACATaGTACAGTGTCTCCCATAGC +
Preference number: 2 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNSVFRT*YSVSHS
Trigger: GCTATGGGAGACACTGTACCATGTACGGAATACTGA...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CAA 90 bp CCTTTGCATTTCATTGTACTGGGAATACTAACATGGGTACAGGTTTaGTTGGCAATTAAGTTTGTTCCCAAAGTCATCATGCTAGCTTTA +
Preference number: 2 (lower is better)
Translates to: PLHFIVLGILTWVQV*LAIKFVPKVIMLAL
Trigger: TAAAGCTAGCATGATGACTTTGGGAACAAACTTAATTGCCAACAAAACCTGTACCCATGTTAGTATTCCCAGTACAATGAAATGCAAAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CAA 90 bp ACTCATGACAAAACTAAACTTAATAATATCTTTCTACTATTCCATTaGTACAGACACACACACATGCGCGTGCACACACACACACACACA +
Preference number: 2 (lower is better)
Translates to: THDKTKLNNIFLLFH*YRHTHMRVHTHTHT
Trigger: TGTGTGTGTGTGTGTGTGCACGCGCATGTGTGTGTGTCTGTACAAATGGAATAGTAGAAAGATATTATTAAGTTTAGTTTTGTCATGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATATGGCTGGAAAGTTTTaGAGGATAATGGAAGGCCTT +
Preference number: 2 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNMAGKF*RIMEGL
Trigger: AAGGCCTTCCATTATCCTTCAAAACTTTCCAGCCAT...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATGAAAGAGCAAGACTTTaGGGTACATACCGAAATGGA +
Preference number: 2 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNERARL*GTYRNG
Trigger: TCCATTTCGGTATGTACCTCAAAGTCTTGCTCTTTC...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR GCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATGGTCTATGCCATCACTaGAATTCAGAAGACTATGGA +
Preference number: 2 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNGLCHH*NSEDYG
Trigger: TCCATAGTCTTCTGAATTGCAGTGATGGCATAGACC...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR GCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATCATGACCATGGTCTATaGCATCACTGCAATTCAGAA +
Preference number: 2 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNHDHGL*HHCNSE
Trigger: TTCTGAATTGCAGTGATGGCATAGACCATGGTCATG...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp GGGAAGGACACTTCATACTCATCAAAAGAAAAATCTACCAGAAGGAAGTTTCAAGGGTACAGGTTTTGTTaGCAATTAAGTTTGTTCCCA +
Preference number: 2 (lower is better)
Translates to: GKDTSYSSKEKSTRRKFQGYRFC*QLSLFP
Trigger: TGGGAACAAACTTAATTGCCAACAAAACCTGTACCC...TTGAAACTTCCTTCTGGTAGATTTTTCTTTTGATGAGTATGAAGTGTCCTTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp GGGAAGGACACTTCATACTCATCAAAAGAAAAATCTACCAGAAGGAAGTTTCAACTCACCTCACATCAATaGACAGTTCATCAAAACAGA +
Preference number: 2 (lower is better)
Translates to: GKDTSYSSKEKSTRRKFQLTSHQ*TVHQNR
Trigger: TCTGTTTTGATGAACTGTCCATTGATGTGAGGTGAG...TTGAAACTTCCTTCTGGTAGATTTTTCTTTTGATGAGTATGAAGTGTCCTTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp GGGAAGGACACTTCATACTCATCAAAAGAAAAATCTACCAGAAGGAAGTTTCAATTTATTTTATGTACATaGGTGCTCTGCCTGCATGTA +
Preference number: 2 (lower is better)
Translates to: GKDTSYSSKEKSTRRKFQFILCT*VLCLHV
Trigger: TACATGCAGGCAGAGCACTCATGTACATAAAATAAA...TTGAAACTTCCTTCTGGTAGATTTTTCTTTTGATGAGTATGAAGTGTCCTTCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp GGGAAGGACACTTCATACTCATCAAAAGAAAAATCTACCAGAAGGAAGTTTCAAACTCAAAGATATCAGTaGCCTTTCTTCATGCAAATG +
Preference number: 2 (lower is better)
Translates to: GKDTSYSSKEKSTRRKFQTQRYQ*PFFMQM
Trigger: CATTTGCATGAAGAAAGGTCACTGATATCTTTGAGT...TTGAAACTTCCTTCTGGTAGATTTTTCTTTTGATGAGTATGAAGTGTCCTTCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR GCA 90 bp GGGAAGGACACTTCATACTCATCAAAAGAAAAATCTACCAGAAGGAAGTTTCAAGATAATGGAAGTCCTTaGCACAATATTCACACTTGT +
Preference number: 2 (lower is better)
Translates to: GKDTSYSSKEKSTRRKFQDNGSP*HNIHTC
Trigger: ACAAGTGTGAATATTGTGGCAAGGACTTCCATTATC...TTGAAACTTCCTTCTGGTAGATTTTTCTTTTGATGAGTATGAAGTGTCCTTCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp GGGAAGGACACTTCATACTCATCAAAAGAAAAATCTACCAGAAGGAAGTTTCAATTCTTCACACTTGTGTaGTTTCACTCACAGATGAAT +
Preference number: 2 (lower is better)
Translates to: GKDTSYSSKEKSTRRKFQFFTLV*FHSQMN
Trigger: ATTCATCTGTGAGTGAAACCACACAAGTGTGAAGAA...TTGAAACTTCCTTCTGGTAGATTTTTCTTTTGATGAGTATGAAGTGTCCTTCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATATTCCAGAGTTGGTATaGCCATCTGTGTTACTATTC +
Preference number: 2 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNIPELV*PSVLLF
Trigger: GAATAGTAACACAGATGGCCATACCAACTCTGGAAT...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATCAAGAGCTGGTTCTTTaGGAAAATCAACATGATAGA +
Preference number: 2 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNQELVL*ENQHDR
Trigger: TCTATCATGTTGATTTTCTCAAAGAACCAGCTCTTG...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATAGGAAGTTTCAATTCTaGACATTGTTGCCACAAATG +
Preference number: 2 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNRKFQF*TLLPQM
Trigger: CATTTGTGGCAACAATGTTCAGAATTGAAACTTCCT...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR TCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATACCAATCAAAGAAACTaGCAAACGGAAAAAGTTCCT +
Preference number: 2 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNTNQRN*QTEKVP
Trigger: AGGAACTTTTTCCGTTTGTCAGTTTCTTTGATTGGT...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CCA 72 bp GAGCACTGCCTGCCTCACAGGAGGCCTGCTCTAACCTaGGACACACAGTTCACCCTGGTTCCAGTGAGGCCT +
Preference number: 3 (lower is better)
Translates to: EHCLPHRRPALT*DTQFTLVPVRP
Trigger: AGGCCTCACTGGAACCAGGGTGAACTGTGTGTCCCAGGTTAGAGCAGGCCTCCTGTGAGGCAGGCAGTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 72 bp CCAGATCAAGCCAGGTTGGAGCAAGCAGGGCCAGAGTaGGCAGAAGCCCTAATTCCAATTCCCAGCAACCAC +
Preference number: 3 (lower is better)
Translates to: PDQARLEQAGPE*AEALIPIPSNH
Trigger: GTGGTTGCTGGGAATTGGAATTAGGGCTTCTGCTCACTCTGGCCCTGCTTGCTCCAACCTGGCTTGATCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CAA 90 bp AAGAGAAAGAGGGGTGGGGCCAGATCAAGCCAGGTTGGAGCAAGCAGGGCCAGATGCCACATATATCACTaGTGGGGGTTTTCTTCTGTA +
Preference number: 3 (lower is better)
Translates to: KRKRGGARSSQVGASRARCHIYH*WGFSSV
Trigger: TACAGAAGAAAACCCCCACAAGTGATATATGTGGCA...TCTGGCCCTGCTTGCTCCAACCTGGCTTGATCTGGCCCCACCCCTCTTTCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CCA 72 bp GGAGCTCTTGACTCTAGCTGCATATGCATCAAAAGATaGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCAT +
Preference number: 3 (lower is better)
Translates to: GALDSSCICIKR*PSRPSLEREAH
Trigger: ATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATGCATATGCAGCTAGAGTCAAGAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CCA 72 bp CGTACATGGTACAGTGTCTCCCATAGCTGGGAATCATaGGTCCAGGAATCAAGGGGTAGAAAGGGAACAGGT +
Preference number: 3 (lower is better)
Translates to: RTWYSVSHSWES*VQESRGRKGTG
Trigger: ACCTGTTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACACTGTACCATGTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CCA 72 bp ATTGCCACAGCAGGGCCCCATGATCATGGAATCCACTaGTCTTACCTTGTACACCACCATCCTGAAGTGAGA +
Preference number: 3 (lower is better)
Translates to: IATAGPHDHGIH*SYLVHHHPEVR
Trigger: TCTCACTTCAGGATGGTGGTGTACAAGGTAAGACCAGTGGATTCCATGATCATGGGGCCCTGCTGTGGCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CAA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAAAGTGAGGGCCAGATGTaGTTAGTTCAGAATTCTACC +
Preference number: 3 (lower is better)
Translates to: VSPIAGNHGSRNQGVERESEGQM*LVQNST
Trigger: GGTAGAATTCTGAACTAACAACATCTGGCCCTCACT...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 72 bp ATTTCACACCCAAAGAATTGCCACAGCAGGGCCCCATaGTCATGGAATCCACTGGTCTTACCTTGTACACCA +
Preference number: 3 (lower is better)
Translates to: ISHPKNCHSRAP*SWNPLVLPCTP
Trigger: TGGTGTACAAGGTAAGACCAGTGGATTCCATGATCATGGGGCCCTGCTGTGGCAATTCTTTGGGTGTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 72 bp AGACCAAAACTGAGCCCCAGATGTAGCACCATTCACTaGAGTGACCAGCCAGCAATACATTGGAGAGCTTCT +
Preference number: 3 (lower is better)
Translates to: RPKLSPRCSTIH*SDQPAIHWRAS
Trigger: AGAAGCTCTCCAATGTATTGCTGGCTGGTCACTTCAGTGAATGGTGCTACATCTGGGGCTCAGTTTTGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CCA 72 bp TCAGTATTCCGTACATGGTACAGTGTCTCCCATAGCTaGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAG +
Preference number: 3 (lower is better)
Translates to: SVFRTWYSVSHS*ESWVQESRGRK
Trigger: CTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACACTGTACCATGTACGGAATACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CAA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAATCTACAGGAGTTCACTaGCACTTAACAATTGTAGGG +
Preference number: 3 (lower is better)
Translates to: VSPIAGNHGSRNQGVERESTGVH*HLTIVG
Trigger: CCCTACAATTGTTAAGTGCAAGTGAACTCCTGTAGA...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CAA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAACTTCCACTAATAGGGTaGGTTTGTCTCTGGTATATT +
Preference number: 3 (lower is better)
Translates to: VSPIAGNHGSRNQGVERELPLIG*VCLWYI
Trigger: AATATACCAGAGACAAACCAACCCTATTAGTGGAAG...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 72 bp CTTCCTCTCAGCACCTCATATAACCTTCTCCAAAACTaGCCATACATCTGGACACAGAACAAGCCGCAACAG +
Preference number: 3 (lower is better)
Translates to: LPLSTSYNLLQN*PYIWTQNKPQQ
Trigger: CTGTTGCGGCTTGTTCTGTGTCCAGATGTATGGTCAGTTTTGGAGAAGGTTATATGAGGTGCTGAGAGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CAA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTTATGGCTGGAAAGTTTaGAAGGATAATGGAAGGCCT +
Preference number: 3 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSYGWKV*KDNGRP
Trigger: AGGCCTTCCATTATCCTTCAAAACTTTCCAGCCATA...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CAA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAAACATGGGTACAGGTTTaGTTGGCAATTAAGTTTGTT +
Preference number: 3 (lower is better)
Translates to: VSPIAGNHGSRNQGVERETWVQV*LAIKFV
Trigger: AACAAACTTAATTGCCAACAAAACCTGTACCCATGT...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CAA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAACAGTTTCATATGATCTaGCTTTTTGATAGAGCACAC +
Preference number: 3 (lower is better)
Translates to: VSPIAGNHGSRNQGVEREQFHMI*LFDRAH
Trigger: GTGTGCTCTATCAAAAAGCAAGATCATATGAAACTG...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CAA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAACTCTCAATGACAACTTaGTTAAACTCAGTTCCTAGA +
Preference number: 3 (lower is better)
Translates to: VSPIAGNHGSRNQGVERELSMTT*LNSVPR
Trigger: TCTAGGAACTGAGTTTAACAAAGTTGTCATTGAGAG...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 72 bp CCGGAAGAGGGCAACAGATCTCATTATAGGTGGTTGTaGACCATTATGTGGTTGCTTGGATTTGAACTCAGG +
Preference number: 3 (lower is better)
Translates to: PEEGNRSHYRWL*TIMWLLGFELR
Trigger: CCTGAGTTCAAATCCAAGCAACCACATAATGGTTCACAACCACCTATAATGAGATCTGTTGCCCTCTTCCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR GCA 72 bp TCTTTCTACTATTCCATTTGTACAGACACACACACATaGGCGTGCACACACACACACACACACAGAGAGAGA +
Preference number: 3 (lower is better)
Translates to: SFYYSICTDTHT*ACTHTHTHRER
Trigger: TCTCTCTCTGTGTGTGTGTGTGTGTGTGCACGCGCATGTGTGTGTGTCTGTACAAATGGAATAGTAGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CCA 72 bp TTGTTCCACCTAGGGTTGCAGACTCTTTCACCTCCTTaGGTGCTTTCTCTAGCTGAAAATGGAAAGTCTTGT +
Preference number: 3 (lower is better)
Translates to: LFHLGLQTLSPP*VLSLAENGKSC
Trigger: ACAAGACTTTCCATTTTCAGCTAGAGAAAGCACCCAAGGAGGTGAAAGAGTCTGCAACCCTAGGTGGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CAA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTTGTTGGCAATTAAGTTaGTTCCCAAAGTCATCATGC +
Preference number: 3 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSCWQLS*FPKSSC
Trigger: GCATGATGACTTTGGGAACAAACTTAATTGCCAACA...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CAA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTGATTGTGTAGACGTTTaGTGGGTTGAAATTTTGCTG +
Preference number: 3 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSDCVDV*WVEILL
Trigger: CAGCAAAATTTCAACCCACAAAACGTCTACACAATC...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 72 bp TACAACACTATGAAAGCTCACAGTCCATGTGTCACATaGCACTCAAGGCAATCTCTTTGTGTGAGCTCTTAC +
Preference number: 3 (lower is better)
Translates to: YNTMKAHSPCVT*HSRQSLCVSSY
Trigger: GTAAGAGCTCACACAAAGAGATTGCCTTGAGTGTCATGTGACACATGGACTGTGAGCTTTCATAGTGTTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 72 bp CCATTCCTGACCTCAAGCTGTACTACAGAGGAATTGTaGTTAAAGAGTGTACGGTTTTGGTACAAAGACAGC +
Preference number: 3 (lower is better)
Translates to: PFLTSSCTTEEL*LKSVRFWYKDS
Trigger: GCTGTCTTTGTACCAAAACCGTACACTCTTTAATCACAATTCCTCTGTAGTACAGCTTGAGGTCAGGAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 72 bp CCAACAACCCTCCAAGTCTTGGAAAGAGCAAGACTTTaGGGTACATACCGAAATGGAACAAAAGCAATGTAC +
Preference number: 3 (lower is better)
Translates to: PTTLQVLERARL*GTYRNGTKAMY
Trigger: GTACATTGCTTTTGTTCCATTTCGGTATGTACCTCAAAGTCTTGCTCTTTCCAAGACTTGGAGGGTTGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CCA 72 bp AGAGTCACTCCCATAGAAAACACACACCGGATGAAGTaGAAAATGCCTACATCACCTTTAGATGGATGGAAT +
Preference number: 3 (lower is better)
Translates to: RVTPIENTHRMK*KMPTSPLDGWN
Trigger: ATTCCATCCATCTAAAGGTGATGTAGGCATTTTCCACTTCATCCGGTGTGTGTTTTCTATGGGAGTGACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CAA 90 bp GGGAAGGACACTTCATACTCATCAAAAGAAAAATCTACCAGAAGGAAGTTTCAAGAAACATGGAAGTCCTaGCCACACACTTCACACTGG +
Preference number: 3 (lower is better)
Translates to: GKDTSYSSKEKSTRRKFQETWKS*PHTSHW
Trigger: CCAGTGTGAAGTGTGTGGCAAGGACTTCCATGTTTC...TTGAAACTTCCTTCTGGTAGATTTTTCTTTTGATGAGTATGAAGTGTCCTTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CAA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATCCCAGGACAGCACAATaGAAAGTGCAGCCAGTTCTC +
Preference number: 3 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNPRTAQ*KVQPVL
Trigger: GAGAACTGGCTGCACTTTCAATTGTGCTGTCCTGGG...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CAA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATCTGGTGCTGACTATGTaGTGGAGTCTACGGGTGTCT +
Preference number: 3 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNLVLTM*WSLRVS
Trigger: AGACACCCGTAGACTCCACAACATAGTCAGCACCAG...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR GCA 72 bp GAATGGCTAAAACAGGGTTCTCCAGAAAGCAGTATATaGTTTGAATCAGTATTCCGTACATGGTACAGTGTC +
Preference number: 3 (lower is better)
Translates to: EWLKQGSPESSI*FESVFRTWYSV
Trigger: GACACTGTACCATGTACGGAATACTGATTCAAAGCATATACTGCTTTCTGGAGAACCCTGTTTTAGCCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR GCA 72 bp AGTAAGGGAAAGAAGAATTTAGATAAGAGCCTACCATaGCACCACATAATGAAACTGAAAAGGGGTAGCCCA +
Preference number: 3 (lower is better)
Translates to: SKGKKNLDKSLP*HHIMKLKRGSP
Trigger: TGGGCTACCCCTTTTCAGTTTCATTATGTGGTGGCATGGTAGGCTCTTATCTAAATTCTTCTTTCCCTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CCA 72 bp CATAGAAGAGAAAGTAGGAAAGAGCCTAGAACTCATTaGTACAGGGGAAATTTCCTGAATGGAATGCCAATG +
Preference number: 3 (lower is better)
Translates to: HRRESRKEPRTH*YRGNFLNGMPM
Trigger: CATTGGCATTCCATTCAGGAAATTTCCCCTGTACCAATGAGTTCTAGGCTCTTTCCTACTTTCTCTTCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CCA 72 bp CCCTATTCATCACCTTGTACAAAGTTCAAGTCCAAGTaGATCAAGGACCTCAACATAAAACCAGATATACGG +
Preference number: 3 (lower is better)
Translates to: PYSSPCTKFKSK*IKDLNIKPDIR
Trigger: CCGTATATCTGGTTTTATGTTGAGGTCCTTGATCCACTTGGACTTGAACTTTGTACAAGGTGATGAATAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CCA 72 bp TGCCACATGCTTCCACTAATAGGGTTGGTTTGTCTCTaGTATATTTTACTTTTAGTCACCAGGCAACATACT +
Preference number: 3 (lower is better)
Translates to: CHMLPLIGLVCL*YILLLVTRQHT
Trigger: AGTATGTTGCCTGGTGACTAAAAGTAAAATATACCAGAGACAAACCAACCCTATTAGTGGAAGCATGTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CCA 72 bp CTTGGAAAGAGCAAGACTTTGAGGTACATACCGAAATaGAACAAAAGCAATGTACAGCAAACCACTATCCAA +
Preference number: 3 (lower is better)
Translates to: LGKSKTLRYIPK*NKSNVQQTTIQ
Trigger: TTGGATAGTGGTTTGCTGTACATTGCTTTTGTTCCATTTCGGTATGTACCTCAAAGTCTTGCTCTTTCCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CCA 72 bp AGGGGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTaGCAATCTTGTTTAGTAAATCAATTCCCAGCCATC +
Preference number: 3 (lower is better)
Translates to: RGSPKLLETNFS*QSCLVNQFPAI
Trigger: GATGGCTGGGAATTGATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CAA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATCCATTATGTGGTTGCTaGGATTTGAACTCAGGACCA +
Preference number: 3 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNPLCGC*DLNSGP
Trigger: TGGTCCTGAGTTCAAATCCAAGCAACCACATAATGG...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 72 bp TGGACACAGAACAAGCCGCAACAGATACAAGAATATTaGAACAAACCATGCATTCTATCAAACTACCACAGA +
Preference number: 3 (lower is better)
Translates to: WTQNKPQQIQEY*NKPCILSNYHR
Trigger: TCTGTGGTAGTTTGATAGAATGCATGGTTTGTTTCAATATTCTTGTATCTGTTGCGGCTTGTTCTGTGTCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 72 bp TATCCATTGTCATGGTATTCTACACAGTATGTCTTCTaGCCAAGAAACACATTTCACACCCAAAGAATTGCC +
Preference number: 3 (lower is better)
Translates to: YPLSWYSTQYVF*PRNTFHTQRIA
Trigger: GGCAATTCTTTGGGTGTGAAATGTGTTTCTTGGTCAGAAGACATACTGTGTAGAATACCATGACAATGGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CCA 72 bp ATCTTTGGCTGTCCTGGGGAACACAAGTTAATATCATaGTGGAAGAAAACAAAGCTTATGAGATTCAAAGCA +
Preference number: 3 (lower is better)
Translates to: IFGCPGEHKLIS*WKKTKLMRFKA
Trigger: TGCTTTGAATCTCATAAGCTTTGTTTTCTTCCACCATGATATTAACTTGTGTTCCCCAGGACAGCCAAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000125495.10
ENSMUST00000175678.2
3UTR CCA 72 bp AAAGCCTTTAATAAAATCCAACAACCCTCCAAGTCTTaGAAAGAGCAAGACTTTGAGGTACATACCGAAATG +
Preference number: 3 (lower is better)
Translates to: KAFNKIQQPSKS*KEQDFEVHTEM
Trigger: CATTTCGGTATGTACCTCAAAGTCTTGCTCTTTCCAAGACTTGGAGGGTTGTTGGATTTTATTAAAGGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CAA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATTACCACAGAACAAGGTaGGATTTCCACAACAACAGA +
Preference number: 3 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNYHRTR*DFHNNR
Trigger: TCTGTTGTTGTGGAAATCCAACCTTGTTCTGTGGTA...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 72 bp ATACAATCTGACAGCTCTACTTTTGGCATGATTGTGTaGATGATTCCAAAGTCTTTACTTACCACACATTGC +
Preference number: 3 (lower is better)
Translates to: IQSDSSTFGMIV*MIPKSLLTTHC
Trigger: GCAATGTGTGGTAAGTAAAGACTTTGGAATCATTCACACAATCATGCCAAAAGTAGAGCTGTCAGATTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR GCA 72 bp AATCTACCAGAAGGAAGTTTCAATTCTGAACATTGTTaGCACAAATGCAAGGGTACCACATTCATAAAACCT +
Preference number: 3 (lower is better)
Translates to: NLPEGSFNSEHC*HKCKGTTFIKP
Trigger: AGGTTTTATGAATGTGGTACCCTTGCATTTGTGGCAACAATGTTCAGAATTGAAACTTCCTTCTGGTAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CCA 72 bp ATCAGAGTTAAAGACTACTTAGAAATAACAGATCTTTaGCTGTCCTGGGGAACACAAGTTAATATCATGGTG +
Preference number: 3 (lower is better)
Translates to: IRVKDYLEITDL*LSWGTQVNIMV
Trigger: CACCATGATATTAACTTGTGTTCCCCAGGACAGCCAAAGATCTGTTATTTCTAAGTAGTCTTTAACTCTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000125495.10
ENSMUST00000175678.2
3UTR CCA 72 bp AAAGTCTTTACTTACCACACATTGCTTACTCTTATCTaGTTTCTATTCAGCAGGGAGCTTTTAGTGTCTGAA +
Preference number: 3 (lower is better)
Translates to: KVFTYHTLLTLI*FLFSRELLVSE
Trigger: TTCAGACACTAAAAGCTCCCTGCTGAATAGAAACCAGATAAGAGTAAGCAATGTGTGGTAAGTAAAGACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CAA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATTCCCTATTCATCACCTaGTACAAAGTTCAAGTCCAA +
Preference number: 3 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNSLFIT*YKVQVQ
Trigger: TTGGACTTGAACTTTGTACAAGGTGATGAATAGGGA...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CAA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATAAGTTAATTCCAGAGTaGGTATGGCCATCTGTGTTA +
Preference number: 3 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNKLIPE*VWPSVL
Trigger: TAACACAGATGGCCATACCAACTCTGGAATTAACTT...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR-3UTR CAA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATTTTCTACTATTCCATTaGTACAGACACACACACATG +
Preference number: 3 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNFLLFH*YRHTHM
Trigger: CATGTGTGTGTGTCTGTACAAATGGAATAGTAGAAA...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 72 bp GAAAGGTCCATACAAGATTTAATAATTACAACACTATaGAAGCTCACAGTCCATGTGTCACATGACACTCAA +
Preference number: 3 (lower is better)
Translates to: ERSIQDLIITTL*KLTVHVSHDTQ
Trigger: TTGAGTGTCATGTGACACATGGACTGTGAGCTTTCATAGTGTTGTAATTATTAAATCTTGTATGGACCTTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR TCA 72 bp TCAAAAGAAAAATCTACCAGAAGGAAGTTTCAATTCTaGACATTGTTGCCACAAATGCAAGGGTACCACATT +
Preference number: 3 (lower is better)
Translates to: SKEKSTRRKFQF*TLLPQMQGYHI
Trigger: AATGTGGTACCCTTGCATTTGTGGCAACAATGTTCAGAATTGAAACTTCCTTCTGGTAGATTTTTCTTTTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CCA 72 bp GAAGATATCAGAAGATGTAAAGATCTTCCATGGTCATaGATAACAAGGATTAACAAGGTGAAAATGGTCATC +
Preference number: 3 (lower is better)
Translates to: EDIRRCKDLPWS*ITRINKVKMVI
Trigger: GATGACCATTTTCACCTTGTTAATCCTTGTTATCCATGACCATGGAAGATCTTTACATCTTCTGATATCTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CCA 72 bp TTTAATGAAAATGAAGACACAGTATACCTATTCCCATaGGACACAGAGTTACTTTGGGAAAGCAGTATTAAT +
Preference number: 3 (lower is better)
Translates to: FNENEDTVYLFP*DTELLWESSIN
Trigger: ATTAATACTGCTTTCCCAAAGTAACTCTGTGTCCCATGGGAATAGGTATACTGTGTCTTCATTTTCATTAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR CCA 90 bp AAGAGAAAGAGGGGTGGGGCCAGATCAAGCCAGGTTGGAGCAAGCAGGGCCAGAAGTCTTGATGGATGTTaGAAGGCCTTGCCACACACT +
Preference number: 4 (lower is better)
Translates to: KRKRGGARSSQVGASRARSLDGC*KALPHT
Trigger: AGTGTGTGGCAAGGCCTTCCAACATCCATCAAGACT...TCTGGCCCTGCTTGCTCCAACCTGGCTTGATCTGGCCCCACCCCTCTTTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR TCA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTCTGTACAGATCCAACTaGGCAGGCTCCAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSLYRSN*AGSRHS
Trigger: GGAATGCCTGGAGCCTGCTCAGTTGGATCTGTACAG...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR TCA 90 bp AAGAGAAAGAGGGGTGGGGCCAGATCAAGCCAGGTTGGAGCAAGCAGGGCCAGAGTCTTGAAGGATAAATaGAGGCCTTGCCACATAATT +
Preference number: 4 (lower is better)
Translates to: KRKRGGARSSQVGASRARVLKDK*RPCHII
Trigger: AATTATGTGGCAAGGCCTTCATTTATCCTTCAAGAC...TCTGGCCCTGCTTGCTCCAACCTGGCTTGATCTGGCCCCACCCCTCTTTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR GCA 90 bp AAGAGAAAGAGGGGTGGGGCCAGATCAAGCCAGGTTGGAGCAAGCAGGGCCAGAGGTTTCTCTCTTGTATaGATTTTTGCATGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: KRKRGGARSSQVGASRARGFSLV*IFAWVE
Trigger: TTCTACCCATGCAAAAATGCATACAAGAGAGAAACC...TCTGGCCCTGCTTGCTCCAACCTGGCTTGATCTGGCCCCACCCCTCTTTCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CAA 72 bp ATGTGGTTGCCGGAACTTGAACCCAGGACAGCACAATaGAAAGTGCAGCCAGTTCTCTTAACTGCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: MWLPELEPRTAQ*KVQPVLLTAEP
Trigger: TGGCTCAGCAGTTAAGAGAACTGGCTGCACTTTCAATTGTGCTGTCCTGGGTTCAAGTTCCGGCAACCACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR CCA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTATGAGAAAGTTTGGATaGAACATGGAACGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSMRKFG*NMERLA
Trigger: GGCCAGGCGTTCCATGTTCCATCCAAACTTTCTCAT...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR CCA 90 bp GTGTCTCCCATAGCTGGGAATCATGGGTCCAGGAATCAAGGGGTAGAAAGGGAATGTGATGAGAAAGTTTaGATGGAACATGGAACGCCT +
Preference number: 4 (lower is better)
Translates to: VSPIAGNHGSRNQGVERECDEKV*MEHGTP
Trigger: AGGCGTTCCATGTTCCATCCAAACTTTCTCATCACA...TTCCCTTTCTACCCCTTGATTCCTGGACCCATGATTCCCAGCTATGGGAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR TCA 90 bp GTTAAAGACTACTTAGAAATAACAGATCTTTGGCTGTCCTGGGGAACACAAGTTCTGTACAGATCCAACTaGGCAGGCTCCAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: VKDYLEITDLWLSWGTQVLYRSN*AGSRHS
Trigger: GGAATGCCTGGAGCCTGCTCAGTTGGATCTGTACAG...AACTTGTGTTCCCCAGGACAGCCAAAGATCTGTTATTTCTAAGTAGTCTTTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000125495.10
ENSMUST00000175678.2
3UTR CAA 72 bp AAGCAGAAGAACATAACTCACAGGAGGCATTGCAATTaGGCACCATCAGGACCCAGTTCTCCTATTACAGCA +
Preference number: 4 (lower is better)
Translates to: KQKNITHRRHCN*APSGPSSPITA
Trigger: TGCTGTAATAGGAGAACTGGGTCCTGATGGTGCCAAATTGCAATGCCTCCTGTGAGTTATGTTCTTCTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR TCA 90 bp TTTCATTTTGGAGCTAGGCAGGGACAGAGACAAATCTTCACTTTTAAGAATGTACTGTACAGATCCAACTaGGCAGGCTCCAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: FHFGARQGQRQIFTFKNVLYRSN*AGSRHS
Trigger: GGAATGCCTGGAGCCTGCTCAGTTGGATCTGTACAG...TACATTCTTAAAAGTGAAGATTTGTCTCTGTCCCTGCCTAGCTCCAAAATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000125495.10
CDS-3UTR TCA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTGAACGGAAAGCCTTTTaGCATACTTCACACTTGTAT +
Preference number: 4 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSERKAF*HTSHLY
Trigger: ATACAAGTGTGAAGTATGTCAAAAGGCTTTCCGTTC...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CAA 72 bp GAACAACATTATGAACTAACCAGTACCCCGGAGCTCTaGACTCTAGCTGCATATGCATCAAAAGATGGCCTA +
Preference number: 4 (lower is better)
Translates to: EQHYELTSTPEL*TLAAYASKDGL
Trigger: TAGGCCATCTTTTGATGCATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CAA 72 bp ATAGGTGGTTGTGAACCATTATGTGGTTGCTTGGATTaGAACTCAGGACCATTTGGAAGAGCAGTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: IGGCEPLCGCLD*NSGPFGRAVSA
Trigger: AGCACTGACTGCTCTTCCAAATGGTCCTGAGTTCAAATCCAAGCAACCACATAATGGTTCACAACCACCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CAA 72 bp AGAAATAGTAAGAAACTATTCACCCAAGCAAGGACATaGAGAGCAAGTGAGAGGCTCTCAGTTGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: RNSKKLFTQART*RASERLSVAEE
Trigger: CTCCTCAGCAACTGAGAGCCTCTCACTTGCTCTCAATGTCCTTGCTTGGGTGAATAGTTTCTTACTATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR CCA 90 bp GGGAAGGACACTTCATACTCATCAAAAGAAAAATCTACCAGAAGGAAGTTTCAAGCATTTCCTGAAAGATaGCGCTGCTCCCTGCACCAA +
Preference number: 4 (lower is better)
Translates to: GKDTSYSSKEKSTRRKFQAFPER*RCSLHQ
Trigger: TTGGTGCAGGGAGCAGCGCCATCTTTCAGGAAATGC...TTGAAACTTCCTTCTGGTAGATTTTTCTTTTGATGAGTATGAAGTGTCCTTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR CCA 90 bp TACTTAGAAATAACAGATCTTTGGCTGTCCTGGGGAACACAAGTTAATATCATGGCATTTCCTGAAAGATaGCGCTGCTCCCTGCACCAA +
Preference number: 4 (lower is better)
Translates to: YLEITDLWLSWGTQVNIMAFPER*RCSLHQ
Trigger: TTGGTGCAGGGAGCAGCGCCATCTTTCAGGAAATGC...CATGATATTAACTTGTGTTCCCCAGGACAGCCAAAGATCTGTTATTTCTAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000175678.2
3UTR CAA 72 bp CTCATTATAGGTGGTTGTGAACCATTATGTGGTTGCTaGGATTTGAACTCAGGACCATTTGGAAGAGCAGTC +
Preference number: 4 (lower is better)
Translates to: LIIGGCEPLCGC*DLNSGPFGRAV
Trigger: GACTGCTCTTCCAAATGGTCCTGAGTTCAAATCCAAGCAACCACATAATGGTTCACAACCACCTATAATGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CAA 72 bp AAGTCCTTGCCACATGCTTCCACTAATAGGGTTGGTTaGTCTCTGGTATATTTTACTTTTAGTCACCAGGCA +
Preference number: 4 (lower is better)
Translates to: KSLPHASTNRVG*SLVYFTFSHQA
Trigger: TGCCTGGTGACTAAAAGTAAAATATACCAGAGACAAACCAACCCTATTAGTGGAAGCATGTGGCAAGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CAA 72 bp TCCAACAACCCTCCAAGTCTTGGAAAGAGCAAGACTTaGAGGTACATACCGAAATGGAACAAAAGCAATGTA +
Preference number: 4 (lower is better)
Translates to: SNNPPSLGKSKT*RYIPKWNKSNV
Trigger: TACATTGCTTTTGTTCCATTTCGGTATGTACCTCAAAGTCTTGCTCTTTCCAAGACTTGGAGGGTTGTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR TCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATCTTGTGTTTAGAAAGTaGGGACAGAGAGCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNLVFRK*GQRAEG
Trigger: GCCTTCCGCTCTCTGTCCTCACTTTCTAAACACAAG...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CAA 72 bp ATTGGAAGTCCTTGCCACATGCTTCCACTAATAGGGTaGGTTTGTCTCTGGTATATTTTACTTTTAGTCACC +
Preference number: 4 (lower is better)
Translates to: IGSPCHMLPLIG*VCLWYILLLVT
Trigger: GGTGACTAAAAGTAAAATATACCAGAGACAAACCAACCCTATTAGTGGAAGCATGTGGCAAGGACTTCCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CAA 72 bp CTGGACACAGAACAAGCCGCAACAGATACAAGAATATaGAAACAAACCATGCATTCTATCAAACTACCACAG +
Preference number: 4 (lower is better)
Translates to: LDTEQAATDTRI*KQTMHSIKLPQ
Trigger: CTGTGGTAGTTTGATAGAATGCATGGTTTGTTTCAATATTCTTGTATCTGTTGCGGCTTGTTCTGTGTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR CCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATAGTAGTGATGCAACATaGAAGGCCTTGCCACATACT +
Preference number: 4 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNSSDAT*KALPHT
Trigger: AGTATGTGGCAAGGCCTTCCATGTTGCATCACTACT...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR TCA 90 bp GGGAAGGACACTTCATACTCATCAAAAGAAAAATCTACCAGAAGGAAGTTTCAAGGTTTTTCTCCTGCATaGATTCTGTTCTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: GKDTSYSSKEKSTRRKFQGFSPA*ILFSSE
Trigger: TTCTGAAGAGAACAGAATTCATGCAGGAGAAAAACC...TTGAAACTTCCTTCTGGTAGATTTTTCTTTTGATGAGTATGAAGTGTCCTTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR TCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATGTGATGAGAAAGTTTTaGTGGAACATGAAACGCCTG +
Preference number: 4 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNVMRKF*WNMKRL
Trigger: CAGGCGTTTCATGTTCCATCAAAACTTTCTCATCAC...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR GCA 90 bp GGGAAGGACACTTCATACTCATCAAAAGAAAAATCTACCAGAAGGAAGTTTCAAGATAATGGAAGGCTTTaGCACATACTGTACACTTGT +
Preference number: 4 (lower is better)
Translates to: GKDTSYSSKEKSTRRKFQDNGRL*HILYTC
Trigger: ACAAGTGTACAGTATGTGGCAAAGCCTTCCATTATC...TTGAAACTTCCTTCTGGTAGATTTTTCTTTTGATGAGTATGAAGTGTCCTTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR CCA 90 bp GGGAAGGACACTTCATACTCATCAAAAGAAAAATCTACCAGAAGGAAGTTTCAACTTAATGATGGACTATaGAAGGACTTGGCACATTCT +
Preference number: 4 (lower is better)
Translates to: GKDTSYSSKEKSTRRKFQLNDGL*KDLAHS
Trigger: AGAATGTGCCAAGTCCTTCCATAGTCCATCATTAAG...TTGAAACTTCCTTCTGGTAGATTTTTCTTTTGATGAGTATGAAGTGTCCTTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CAA 72 bp ATTGTACTGGGAATACTAACATGGGTACAGGTTTTGTaGGCAATTAAGTTTGTTCCCAAAGTCATCATGCTA +
Preference number: 4 (lower is better)
Translates to: IVLGILTWVQVL*AIKFVPKVIML
Trigger: TAGCATGATGACTTTGGGAACAAACTTAATTGCCAACAAAACCTGTACCCATGTTAGTATTCCCAGTACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CAA 72 bp TTCATTGTACTGGGAATACTAACATGGGTACAGGTTTaGTTGGCAATTAAGTTTGTTCCCAAAGTCATCATG +
Preference number: 4 (lower is better)
Translates to: FIVLGILTWVQV*LAIKFVPKVIM
Trigger: CATGATGACTTTGGGAACAAACTTAATTGCCAACAAAACCTGTACCCATGTTAGTATTCCCAGTACAATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CAA 72 bp AAGATCAGAGGACAACATTCAGAGATAATTACCCCTTaGCATTTCATTGTACTGGGAATACTAACATGGGTA +
Preference number: 4 (lower is better)
Translates to: KIRGQHSEIITP*HFIVLGILTWV
Trigger: TACCCATGTTAGTATTCCCAGTACAATGAAATGCAAAGGGGTAATTATCTCTGAATGTTGTCCTCTGATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CAA 72 bp AAACCATGCATTCTATCAAACTACCACAGAACAAGGTaGGATTTCCACAACAACAGAAACAACAGAAATCAC +
Preference number: 4 (lower is better)
Translates to: KPCILSNYHRTR*DFHNNRNNRNH
Trigger: GTGATTTCTGTTGTTTCTGTTGTTGTGGAAATCCAACCTTGTTCTGTGGTAGTTTGATAGAATGCATGGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
3UTR CAA 72 bp CACCACATAATGAAACTGAAAAGGGGTAGCCCAAAGTaGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTA +
Preference number: 4 (lower is better)
Translates to: HHIMKLKRGSPK*LETNFSWQSCL
Trigger: TAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACCCCTTTTCAGTTTCATTATGTGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR TCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATATGGTTGGAAAGTCTTaGTGGATAATAAAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNMVGKS*WIIKGL
Trigger: AAGGCCTTTTATTATCCATCAAGACTTTCCAACCAT...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR GCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATGGTTTCTCTCTTGTATaGATTTCTGCATGGTTAGAA +
Preference number: 4 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNGFSLV*ISAWLE
Trigger: TTCTAACCATGCAGAAATGCATACAAGAGAGAAACC...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR GCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATAAACTAATAATGGAATaGAGAAGGCCTTGCCACATA +
Preference number: 4 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNKLIME*RRPCHI
Trigger: TATGTGGCAAGGCCTTCTGCATTCCATTATTAGTTT...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR CCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATAGTAATGATGGAAAGTaGAAGGCTTTTCCACATACT +
Preference number: 4 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNSNDGK*KAFPHT
Trigger: AGTATGTGGAAAAGCCTTCCACTTTCCATCATTACT...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR CCA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATGAATGGATTTTCTTATaGTTGGAAAGTCTTGATGGA +
Preference number: 4 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNEWIFL*LESLDG
Trigger: TCCATCAAGACTTTCCAACCATAAGAAAATCCATTC...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR CAA 90 bp AAGAGAAAGAGGGGTGGGGCCAGATCAAGCCAGGTTGGAGCAAGCAGGGCCAGATATGGTTGGAAAGTCTaGATGGATAATGGAAGGCCT +
Preference number: 5 (lower is better)
Translates to: KRKRGGARSSQVGASRARYGWKV*MDNGRP
Trigger: AGGCCTTCCATTATCCATCAAGACTTTCCAACCATA...TCTGGCCCTGCTTGCTCCAACCTGGCTTGATCTGGCCCCACCCCTCTTTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR CAA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTGGATGTTGGAAGGCCTaGCCACACACTTCACACTTG +
Preference number: 5 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSGCWKA*PHTSHL
Trigger: CAAGTGTGAAGTGTGTGGCAAGGCCTTCCAACATCC...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR CAA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTGGACTATGGAAGGACTaGGCACATTCTTCACACTTG +
Preference number: 5 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSGLWKD*AHSSHL
Trigger: CAAGTGTGAAGAATGTGCCAAGTCCTTCCATAGTCC...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR CAA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTTATGTCTGGAAAGTCTaGATGGATGTTGGAAGGCCT +
Preference number: 5 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSYVWKV*MDVGRP
Trigger: AGGCCTTCCAACATCCATCAAGACTTTCCAGACATA...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR CAA 90 bp AGCAACGTTTTTACTTCCTGTTCCCACACCCCAAACTTCTGCTGGCCTAGAAGTAAGCATCTGGTGATTTaGAAACACTTTTGTCCACTC +
Preference number: 5 (lower is better)
Translates to: SNVFTSCSHTPNFCWPRSKHLVI*KHFCPL
Trigger: GAGTGGACAAAAGTGTTTCAAAATCACCAGATGCTT...ACTTCTAGGCCAGCAGAAGTTTGGGGTGTGGGAACAGGAAGTAAAAACGTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR CAA 90 bp GGGAAGGACACTTCATACTCATCAAAAGAAAAATCTACCAGAAGGAAGTTTCAATATGGTTGGAAAGTCTaGATGGATAATAAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: GKDTSYSSKEKSTRRKFQYGWKV*MDNKRP
Trigger: AGGCCTTTTATTATCCATCAAGACTTTCCAACCATA...TTGAAACTTCCTTCTGGTAGATTTTTCTTTTGATGAGTATGAAGTGTCCTTCCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS-3UTR CAA 90 bp GGTAGCCCAAAGTTGTTAGAAACCAACTTTAGTTGGCAATCTTGTTTAGTAAATTGTGATGAGAAAGTTTaGATGGAACATGAAACGCCT +
Preference number: 5 (lower is better)
Translates to: GSPKLLETNFSWQSCLVNCDEKV*MEHETP
Trigger: AGGCGTTTCATGTTCCATCAAAACTTTCTCATCACA...ATTTACTAAACAAGATTGCCAACTAAAGTTGGTTTCTAACAACTTTGGGCTACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS TCA 72 bp CTCTCTTGTATGCATTTCTGCATGGTTAGAAAGTCTTaGGGGATAATCGAAAGCCTTGCCACATACTTCACA +
Preference number: 6 (lower is better)
Translates to: LSCMHFCMVRKS*GIIESLATYFT
Trigger: TGTGAAGTATGTGGCAAGGCTTTCGATTATCCCTCAAGACTTTCTAACCATGCAGAAATGCATACAAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS TCA 72 bp CTCTCTTGTATGCATTTTTGCATGGGTAGAAAGTCTTaGGGGATAATCGAAAGCCTTGCCACATACTTCACA +
Preference number: 6 (lower is better)
Translates to: LSCMHFCMGRKS*GIIESLATYFT
Trigger: TGTGAAGTATGTGGCAAGGCTTTCGATTATCCCTCAAGACTTTCTACCCATGCAAAAATGCATACAAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS CCA 72 bp TCCTGTCTGAATTATTTTGTGATGAGAAAGTTTGGATaGAACATGGAACGCCTGGCCACATATGTCAGACTT +
Preference number: 6 (lower is better)
Translates to: SCLNYFVMRKFG*NMERLATYVRL
Trigger: AAGTCTGACATATGTGGCCAGGCGTTCCATGTTCCATCCAAACTTTCTCATCACAAAATAATTCAGACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10
CDS TCA 72 bp TTCTCCTCTATGAATTATTTTGTGATGAGAAAGTTTTaGTGGAACATGAAACGCCTGGTCACATATATCACA +
Preference number: 6 (lower is better)
Translates to: FSSMNYFVMRKF*WNMKRLVTYIT
Trigger: TGTGATATATGTGACCAGGCGTTTCATGTTCCATCAAAACTTTCTCATCACAAAATAATTCATAGAGGAGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000137496.10