Pregenerated sensors for ZFP729B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058093Ensembl transcript IDs: ENSMUST00000012873.16, ENSMUST00000138725.3
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CATGGAGGTCAGAGAAAAATCTGCAGAGGTAATTACCTATTTTGTGGGTACTTGATCTGCATGTACATCTaGATACCAGAAGAGGGCATC | + |
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Preference number: 2 (lower is better) Translates to: HGGQRKICRGNYLFCGYLICMYI*IPEEGI Trigger: GATGCCCTCTTCTGGTATGCAGATGTACATGCAGAT...CAAGTACCCACAAAATAGGTAATTACCTCTGCAGATTTTTCTCTGACCTCCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| 3UTR-3UTR TCA 90 bp | CATGGAGGTCAGAGAAAAATCTGCAGAGGTAATTACCTATTTTGTGGGTACTTGTGGAGTACCTTGTGTTaGGACATACAAGAAAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: HGGQRKICRGNYLFCGYLWSTLC*DIQESL Trigger: TAGACTTTCTTGTATGTCTCAACACAAGGTACTCCA...CAAGTACCCACAAAATAGGTAATTACCTCTGCAGATTTTTCTCTGACCTCCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| 3UTR-3UTR GCA 90 bp | GTCCATGTGTTATGTGAGACTCAAGGCAATCTCTTATGTGTGATCTATTACAACGACAATGGAAATCCTTaGCACACACTACACACTTGT | + |
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Preference number: 2 (lower is better) Translates to: VHVLCETQGNLLCVIYYNDNGNP*HTLHTC Trigger: ACAAGTGTGTAGTGTGTGGCAAGGATTTCCATTGTC...GTTGTAATAGATCACACATAAGAGATTGCCTTGAGTCTCACATAACACATGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| 3UTR-3UTR GCA 90 bp | CATGGAGGTCAGAGAAAAATCTGCAGAGGTAATTACCTATTTTGTGGGTACTTGGTAGGAATTATCCTGTaGTCAGCATATGCTATGGAA | + |
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Preference number: 2 (lower is better) Translates to: HGGQRKICRGNYLFCGYLVGIIL*SAYAME Trigger: TTCCATAGCATATGCTGAGCACAGGATAATTCCTAC...CAAGTACCCACAAAATAGGTAATTACCTCTGCAGATTTTTCTCTGACCTCCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| 3UTR-3UTR TCA 90 bp | ATATTTCTGTACAGTAGGAATTATCCTGTGCTCAGCATATGCTATGGAACTTCTAGTGATGATGAAATTTaGGGCCCGTCTACATACTTC | + |
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Preference number: 2 (lower is better) Translates to: IFLYSRNYPVLSICYGTSSDDEI*GPSTYF Trigger: GAAGTATGTAGACGGGCCTCAAATTTCATCATCACT...AGAAGTTCCATAGCATATGCTGAGCACAGGATAATTCCTACTGTACAGAAATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| 3UTR-3UTR TCA 90 bp | CTATTTCACTCCAGCTTGGAGTACCTTGTGTTGAGACATACAAGAAAGTCTATTGCAACATTTTTCACATaGGGCATTTCAGTCTTGTAT | + |
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Preference number: 2 (lower is better) Translates to: LFHSSLEYLVLRHTRKSIATFFT*GISVLY Trigger: ATACAAGACTGAAATGCCTCATGTGAAAAATGTTGC...AATAGACTTTCTTGTATGTCTCAACACAAGGTACTCCAAGCTGGAGTGAAATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| 3UTR-3UTR TCA 90 bp | GTCCATGTGTTATGTGAGACTCAAGGCAATCTCTTATGTGTGATCTATTACAACGGTATAGAAGTGTTCTaGTTCTCAAACAGAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: VHVLCETQGNLLCVIYYNGIEVF*FSNRRN Trigger: GTTTCTTCTGTTTGAGAATCAGAACACTTCTATACC...GTTGTAATAGATCACACATAAGAGATTGCCTTGAGTCTCACATAACACATGGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| 3UTR-3UTR GCA 90 bp | ATTATTTTAGAAAGCATGCTTAGGGAACATGGTGGAATGGAGACAGATATGATACCTGTGCTCAGCATATaGTATGGAACTTCTGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: IILESMLREHGGMETDMIPVLSI*YGTSEV Trigger: TACTTCAGAAGTTCCATAGCATATGCTGAGCACAGG...TATCATATCTGTCTCCATTCCACCATGTTCCCTAAGCATGCTTTCTAAAATAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| 3UTR-3UTR GCA 90 bp | GTCCATGTGTTATGTGAGACTCAAGGCAATCTCTTATGTGTGATCTATTACAACACAAGTGACTACTTTTaGAACAATGGTATAGAAGTG | + |
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Preference number: 2 (lower is better) Translates to: VHVLCETQGNLLCVIYYNTSDYF*NNGIEV Trigger: CACTTCTATACCATTGTTGCAAAAGTAGTCACTTGT...GTTGTAATAGATCACACATAAGAGATTGCCTTGAGTCTCACATAACACATGGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| 3UTR-3UTR GCA 90 bp | ATTATTTTAGAAAGCATGCTTAGGGAACATGGTGGAATGGAGACAGATATGATAGGTCAGAGAAAAATCTaGAGAGGTAATTACCTATTT | + |
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Preference number: 2 (lower is better) Translates to: IILESMLREHGGMETDMIGQRKI*RGNYLF Trigger: AAATAGGTAATTACCTCTGCAGATTTTTCTCTGACC...TATCATATCTGTCTCCATTCCACCATGTTCCCTAAGCATGCTTTCTAAAATAAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| 3UTR-3UTR CAA 90 bp | ATTATTTTAGAAAGCATGCTTAGGGAACATGGTGGAATGGAGACAGATATGATAGGACAATGGAAATCCTaGCCACACACTACACACTTG | + |
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Preference number: 3 (lower is better) Translates to: IILESMLREHGGMETDMIGQWKS*PHTTHL Trigger: CAAGTGTGTAGTGTGTGGCAAGGATTTCCATTGTCC...TATCATATCTGTCTCCATTCCACCATGTTCCCTAAGCATGCTTTCTAAAATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| 3UTR-3UTR CAA 90 bp | ATTCAGCAGAAAGCTTTCGATAACTTAGTGTCTGAAGAAGTGTTAATGTACTGTTCCCTAATGTTTTTGTaGAGCACAGAAGGCCAGGAT | + |
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Preference number: 3 (lower is better) Translates to: IQQKAFDNLVSEEVLMYCSLMFL*STEGQD Trigger: ATCCTGGCCTTCTGTGCTCAACAAAAACATTAGGGA...ACAGTACATTAACACTTCTTCAGACACTAAGTTATCGAAAGCTTTCTGCTGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| 3UTR CCA 72 bp | CCTATTTTGTGGGTACTTGGAATACTAACATGGGTATaGGTCTTGTCTTTTAAGTTTGTTCCCAAACTCATG | + |
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Preference number: 3 (lower is better) Translates to: PILWVLGILTWV*VLSFKFVPKLM Trigger: CATGAGTTTGGGAACAAACTTAAAAGACAAGACCCATACCCATGTTAGTATTCCAAGTACCCACAAAATAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| 3UTR TCA 72 bp | TTGTACTATTTCACTCCAGCTTGGAGTACCTTGTGTTaGGACATACAAGAAAGTCTATTAAAGGGTTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: LYYFTPAWSTLC*DIQESLLKGLQ Trigger: TTGCAAACCCTTTAATAGACTTTCTTGTATGTCTCAACACAAGGTACTCCAAGCTGGAGTGAAATAGTACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| 3UTR CAA 72 bp | TTGTGGGTACTTGGAATACTAACATGGGTATGGGTCTaGTCTTTTAAGTTTGTTCCCAAACTCATGCTAGCC | + |
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Preference number: 4 (lower is better) Translates to: LWVLGILTWVWV*SFKFVPKLMLA Trigger: GGCTAGCATGAGTTTGGGAACAAACTTAAAAGACAAGACCCATACCCATGTTAGTATTCCAAGTACCCACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS-3UTR CCA 90 bp | GTCCATGTGTTATGTGAGACTCAAGGCAATCTCTTATGTGTGATCTATTACAACATATTCTCTGCATTCTaGGAGCATAGAGGTAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VHVLCETQGNLLCVIYYNIFSAF*EHRGSC Trigger: GCAGCTACCTCTATGCTCCCAGAATGCAGAGAATAT...GTTGTAATAGATCACACATAAGAGATTGCCTTGAGTCTCACATAACACATGGAC 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS-3UTR TCA 90 bp | ATTCAGCAGAAAGCTTTCGATAACTTAGTGTCTGAAGAAGTGTTAATGTACTGTCAATGGCCACATCCTTaGATGACAGCATTTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: IQQKAFDNLVSEEVLMYCQWPHP*MTAFPP Trigger: TGGAGGAAATGCTGTCATTCAAGGATGTGGCCATTG...ACAGTACATTAACACTTCTTCAGACACTAAGTTATCGAAAGCTTTCTGCTGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS-3UTR TCA 90 bp | CATGGAGGTCAGAGAAAAATCTGCAGAGGTAATTACCTATTTTGTGGGTACTTGATGGCTAAAAAGTCTTaGTGGATAATGGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: HGGQRKICRGNYLFCGYLMAKKS*WIMEGL Trigger: AAGGCCTTCCATTATCCATCAAGACTTTTTAGCCAT...CAAGTACCCACAAAATAGGTAATTACCTCTGCAGATTTTTCTCTGACCTCCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS-3UTR GCA 90 bp | ATTCAGCAGAAAGCTTTCGATAACTTAGTGTCTGAAGAAGTGTTAATGTACTGTGATGTTGGAAGGCCTTaGCACACACTTCACACTTGT | + |
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Preference number: 4 (lower is better) Translates to: IQQKAFDNLVSEEVLMYCDVGRP*HTLHTC Trigger: ACAAGTGTGAAGTGTGTGGCAAGGCCTTCCAACATC...ACAGTACATTAACACTTCTTCAGACACTAAGTTATCGAAAGCTTTCTGCTGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS-3UTR GCA 90 bp | ATTATTTTAGAAAGCATGCTTAGGGAACATGGTGGAATGGAGACAGATATGATAAAACATGGAAGGCCTTaGCACACACTTCACACTGGT | + |
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Preference number: 4 (lower is better) Translates to: IILESMLREHGGMETDMIKHGRP*HTLHTG Trigger: ACCAGTGTGAAGTGTGTGGCAAGGCCTTCCATGTTT...TATCATATCTGTCTCCATTCCACCATGTTCCCTAAGCATGCTTTCTAAAATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS-3UTR CCA 90 bp | GTCCATGTGTTATGTGAGACTCAAGGCAATCTCTTATGTGTGATCTATTACAACAGCAATGATGGAAAATaGAAGGCCTTGCCACATTCT | + |
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Preference number: 4 (lower is better) Translates to: VHVLCETQGNLLCVIYYNSNDGK*KALPHS Trigger: AGAATGTGGCAAGGCCTTCCATTTTCCATCATTGCT...GTTGTAATAGATCACACATAAGAGATTGCCTTGAGTCTCACATAACACATGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS-3UTR TCA 90 bp | ATATTTCTGTACAGTAGGAATTATCCTGTGCTCAGCATATGCTATGGAACTTCTATGCGTGGAAAGTCTTaGTGGATAATAGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: IFLYSRNYPVLSICYGTSMRGKS*WIIEGL Trigger: AAGGCCTTCTATTATCCATCAAGACTTTCCACGCAT...AGAAGTTCCATAGCATATGCTGAGCACAGGATAATTCCTACTGTACAGAAATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS-3UTR TCA 90 bp | GTCCATGTGTTATGTGAGACTCAAGGCAATCTCTTATGTGTGATCTATTACAACGTGATGAGAAAGTTTTaGTGGAACATGAAATGCCTG | + |
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Preference number: 4 (lower is better) Translates to: VHVLCETQGNLLCVIYYNVMRKF*WNMKCL Trigger: CAGGCATTTCATGTTCCATCAAAACTTTCTCATCAC...GTTGTAATAGATCACACATAAGAGATTGCCTTGAGTCTCACATAACACATGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS-3UTR GCA 90 bp | GGCTTTATTTACCACATTTCTCAATCTTACATAGTTTCCATTCAGCAGAAAGCTGAAGGCTCTTGTATTTaGTCCAGACATGTGACCAGA | + |
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Preference number: 4 (lower is better) Translates to: GFIYHISQSYIVSIQQKAEGSCI*SRHVTR Trigger: TCTGGTCACATGTCTGGAGCAAATACAAGAGCCTTC...AGCTTTCTGCTGAATGGAAACTATGTAAGATTGAGAAATGTGGTAAATAAAGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS-3UTR CCA 90 bp | GTCCATGTGTTATGTGAGACTCAAGGCAATCTCTTATGTGTGATCTATTACAACAGTAATGATGCAATGTaGAAGGCCTTTCCACATACA | + |
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Preference number: 4 (lower is better) Translates to: VHVLCETQGNLLCVIYYNSNDAM*KAFPHT Trigger: TGTATGTGGAAAGGCCTTCCACATTGCATCATTACT...GTTGTAATAGATCACACATAAGAGATTGCCTTGAGTCTCACATAACACATGGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS-3UTR TCA 90 bp | CTATTTCACTCCAGCTTGGAGTACCTTGTGTTGAGACATACAAGAAAGTCTATTATGATTGGAAAGTTTTaGAGGATAATGGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LFHSSLEYLVLRHTRKSIMIGKF*RIMEGL Trigger: AAGGCCTTCCATTATCCTTCAAAACTTTCCAATCAT...AATAGACTTTCTTGTATGTCTCAACACAAGGTACTCCAAGCTGGAGTGAAATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS-3UTR GCA 90 bp | ATATTTCTGTACAGTAGGAATTATCCTGTGCTCAGCATATGCTATGGAACTTCTGTAAGGTTTTTCTCCTaGATGAATTGTGCTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: IFLYSRNYPVLSICYGTSVRFFS*MNCALF Trigger: GAAGAGAGCACAATTCATGCAGGAGAAAAACCTTAC...AGAAGTTCCATAGCATATGCTGAGCACAGGATAATTCCTACTGTACAGAAATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS-3UTR GCA 90 bp | GGCTTTATTTACCACATTTCTCAATCTTACATAGTTTCCATTCAGCAGAAAGCTAAAGGAGTGATAAAATaGGGAAGGCCTTCCCACATA | + |
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Preference number: 4 (lower is better) Translates to: GFIYHISQSYIVSIQQKAKGVIK*GRPSHI Trigger: TATGTGGGAAGGCCTTCCGCATTTTATCACTCCTTT...AGCTTTCTGCTGAATGGAAACTATGTAAGATTGAGAAATGTGGTAAATAAAGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS-3UTR CCA 90 bp | TTTCACTCCAGCTTGGAGTACCTTGTGTTGAGACATACAAGAAAGTCTATTAAACTTAATGATGGAATATaGAAGGACTTGGCACGTTCT | + |
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Preference number: 4 (lower is better) Translates to: FHSSLEYLVLRHTRKSIKLNDGI*KDLARS Trigger: AGAACGTGCCAAGTCCTTCCATATTCCATCATTAAG...TTTAATAGACTTTCTTGTATGTCTCAACACAAGGTACTCCAAGCTGGAGTGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| 3UTR CAA 72 bp | TTTGTACTATTTCACTCCAGCTTGGAGTACCTTGTGTaGAGACATACAAGAAAGTCTATTAAAGGGTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: FVLFHSSLEYLV*RHTRKSIKGFA Trigger: TGCAAACCCTTTAATAGACTTTCTTGTATGTCTCAACACAAGGTACTCCAAGCTGGAGTGAAATAGTACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS-3UTR TCA 90 bp | ATTATTTTAGAAAGCATGCTTAGGGAACATGGTGGAATGGAGACAGATATGATAAGTTTTGATGGAACATaGAATGCCTGGTCACATATG | + |
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Preference number: 4 (lower is better) Translates to: IILESMLREHGGMETDMISFDGT*NAWSHM Trigger: CATATGTGACCAGGCATTTCATGTTCCATCAAAACT...TATCATATCTGTCTCCATTCCACCATGTTCCCTAAGCATGCTTTCTAAAATAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS-3UTR TCA 90 bp | GGCTTTATTTACCACATTTCTCAATCTTACATAGTTTCCATTCAGCAGAAAGCTGTGTTTAGAAAGCAATaGTGGAAAATGGAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GFIYHISQSYIVSIQQKAVFRKQ*WKMEGL Trigger: AAGGCCTTCCATTTTCCATCATTGCTTTCTAAACAC...AGCTTTCTGCTGAATGGAAACTATGTAAGATTGAGAAATGTGGTAAATAAAGCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS-3UTR TCA 90 bp | ATTATTTTAGAAAGCATGCTTAGGGAACATGGTGGAATGGAGACAGATATGATAGTGTTTAGAGAGTATTaGTGGATAATGAAAGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: IILESMLREHGGMETDMIVFREY*WIMKGL Trigger: AAGGCCTTTCATTATCCATCAATACTCTCTAAACAC...TATCATATCTGTCTCCATTCCACCATGTTCCCTAAGCATGCTTTCTAAAATAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS GCA 90 bp | ATAGAGGTAGCTGCTCCTCTTTTCACATCTGAAGGCTCTTGTATTTaGTCCAGACATGTGACCAGATATGGCTTAGACGAAGTAAGACCC | + |
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Preference number: 5 (lower is better) Translates to: IEVAAPLFTSEGSCI*SRHVTRYGLDEVRP Trigger: GGGTCTTACTTCGTCTAAGCCATATCTGGTCACATGTCTGGAGCAAATACAAGAGCCTTCAGATGTGAAAAGAGGAGCAGCTACCTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000012873.16 ENSMUST00000138725.3 |
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| CDS-3UTR CAA 90 bp | CTATTTCACTCCAGCTTGGAGTACCTTGTGTTGAGACATACAAGAAAGTCTATTGAAACATGGAAGGCCTaGCCACACACTTCACACTGG | + |
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Preference number: 5 (lower is better) Translates to: LFHSSLEYLVLRHTRKSIETWKA*PHTSHW Trigger: CCAGTGTGAAGTGTGTGGCAAGGCCTTCCATGTTTC...AATAGACTTTCTTGTATGTCTCAACACAAGGTACTCCAAGCTGGAGTGAAATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS-3UTR CAA 90 bp | CTATTTCACTCCAGCTTGGAGTACCTTGTGTTGAGACATACAAGAAAGTCTATTTATGCGTGGAAAGTCTaGATGGATAATAGAAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: LFHSSLEYLVLRHTRKSIYAWKV*MDNRRP Trigger: AGGCCTTCTATTATCCATCAAGACTTTCCACGCATA...AATAGACTTTCTTGTATGTCTCAACACAAGGTACTCCAAGCTGGAGTGAAATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS-3UTR CAA 90 bp | ATTATTTTAGAAAGCATGCTTAGGGAACATGGTGGAATGGAGACAGATATGATACCACATACATCACACTaGTGGGGTTTTCCTTCCATA | + |
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Preference number: 5 (lower is better) Translates to: IILESMLREHGGMETDMIPHTSH*WGFPSI Trigger: TATGGAAGGAAAACCCCACAAGTGTGATGTATGTGG...TATCATATCTGTCTCCATTCCACCATGTTCCCTAAGCATGCTTTCTAAAATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS-3UTR CAA 90 bp | ATATTTCTGTACAGTAGGAATTATCCTGTGCTCAGCATATGCTATGGAACTTCTTGTGATGAGAAAGTTTaGATGGAACATGAAATGCCT | + |
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Preference number: 5 (lower is better) Translates to: IFLYSRNYPVLSICYGTSCDEKV*MEHEMP Trigger: AGGCATTTCATGTTCCATCAAAACTTTCTCATCACA...AGAAGTTCCATAGCATATGCTGAGCACAGGATAATTCCTACTGTACAGAAATAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS-3UTR CAA 90 bp | ATTCAGCAGAAAGCTTTCGATAACTTAGTGTCTGAAGAAGTGTTAATGTACTGTAATTATCTGGTGATTTaGAAACACTTTGGACCACTC | + |
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Preference number: 5 (lower is better) Translates to: IQQKAFDNLVSEEVLMYCNYLVI*KHFGPL Trigger: GAGTGGTCCAAAGTGTTTCAAAATCACCAGATAATT...ACAGTACATTAACACTTCTTCAGACACTAAGTTATCGAAAGCTTTCTGCTGAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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| CDS-3UTR CAA 90 bp | ATTCAGCAGAAAGCTTTCGATAACTTAGTGTCTGAAGAAGTGTTAATGTACTGTTATGATTGGAAAGTTTaGAAGGATAATGGAAGGCCT | + |
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Preference number: 5 (lower is better) Translates to: IQQKAFDNLVSEEVLMYCYDWKV*KDNGRP Trigger: AGGCCTTCCATTATCCTTCAAAACTTTCCAATCATA...ACAGTACATTAACACTTCTTCAGACACTAAGTTATCGAAAGCTTTCTGCTGAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000012873.16 |
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