Pregenerated sensors for ZFP709 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056019Ensembl transcript IDs: ENSMUST00000034259.8, ENSMUST00000188374.7, ENSMUST00000188685.7
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAAGGTCGCCGGCGGTGGTGGTGCACGCCTTTAATCCTTGCACTTaGGAGGCAGAGGCAGGCAGATTTCTGAGTTTGAGGCCAGCATGG | + |
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Preference number: 1 (lower is better) Translates to: PRSPAVVVHAFNPCT*EAEAGRFLSLRPAW Trigger: CCATGCTGGCCTCAAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCAAGGATTAAAGGCGTGCACCACCACCGCCGGCGACCTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR GCA 90 bp | GAGTTGCCAAGGTCGCCGGCGGTGGTGGTGCACGCCTTTAATCCTTaGACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTTGAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: ELPRSPAVVVHAFNP*TWEAEAGRFLSLRP Trigger: TGGCCTCAAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCAAGGATTAAAGGCGTGCACCACCACCGCCGGCGACCTTGGCAACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR GCA 90 bp | AATGTTTTCTTTTATAAGAGTTGCCAAGGTCGCCGGCGGTGGTGGTaGACGCCTTTAATCCTTGCACTTGGGAGGCAGAGGCAGGCAGAT | + |
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Preference number: 1 (lower is better) Translates to: NVFFYKSCQGRRRWW*TPLILALGRQRQAD Trigger: ATCTGCCTGCCTCTGCCTCCCAAGTGCAAGGATTAAAGGCGTGCACCACCACCGCCGGCGACCTTGGCAACTCTTATAAAAGAAAACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR CCA 90 bp | AAGATAAAGCCCAGCATGATGGCACACACCTTTATTCCCAGCACTTaGGAAGCAGAGACAGATAGATCTCCAAGTTTGATGCCAGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: KIKPSMMAHTFIPST*EAETDRSPSLMPVW Trigger: CCAGACTGGCATCAAACTTGGAGATCTATCTGTCTCTGCTTCCCAAGTGCTGGGAATAAAGGTGTGTGCCATCATGCTGGGCTTTATCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR GCA 90 bp | AACAGGTTAGAGTTATCACAGAGAAAGGAGCTTAAGTTGGGGAAGTaGCTCCATGAGATCGAGCTGTGGAGCATTTTCCCAATTAGTGAT | + |
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Preference number: 1 (lower is better) Translates to: NRLELSQRKELKLGK*LHEIELWSIFPISD Trigger: ATCACTAATTGGGAAAATGCTCCACAGCTCGATCTCATGGAGGCACTTCCCCAACTTAAGCTCCTTTCTCTGTGATAACTCTAACCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR CCA 90 bp | AATTTGAAGTTGAGATATACAAGTACAGTTTCTCATGATGCTGGTTaGATAGTAGCAAGCAGCATAGTAAGCCACCACCGATGCGGGAGC | + |
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Preference number: 1 (lower is better) Translates to: NLKLRYTSTVSHDAG*IVASSIVSHHRCGS Trigger: GCTCCCGCATCGGTGGTGGCTTACTATGCTGCTTGCTACTATCCAACCAGCATCATGAGAAACTGTACTTGTATATCTCAACTTCAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR CCA 90 bp | AATTTGAAGTTGAGATATACAAGTACAGTTTCTCATGATGCTGGTTaGGTAGTAGCAAGCAGCATAGTAAGCCACCACCCACAAGGTACC | + |
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Preference number: 1 (lower is better) Translates to: NLKLRYTSTVSHDAG*VVASSIVSHHPQGT Trigger: GGTACCTTGTGGGTGGTGGCTTACTATGCTGCTTGCTACTACCCAACCAGCATCATGAGAAACTGTACTTGTATATCTCAACTTCAAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR TCA 90 bp | TGTATCACTGCTGACTTCTGTAGTATCATGCCTTCTTTGGGTCAATaGACTGAGACCTCCCTTAAGTTCTTCTTCCATCTGGTTTATCAC | + |
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Preference number: 1 (lower is better) Translates to: CITADFCSIMPSLGQ*TETSLKFFFHLVYH Trigger: GTGATAAACCAGATGGAAGAAGAACTTAAGGGAGGTCTCAGTTCATTGACCCAAAGAAGGCATGATACTACAGAAGTCAGCAGTGATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR CCA 90 bp | ATTATCACTGTATCACTGCTGACTTCTGTAGTATCATGCCTTCTTTaGGTCAATGAACTGAGACCTCCCTTAAGTTCTTCTTCCATCTGG | + |
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Preference number: 1 (lower is better) Translates to: IITVSLLTSVVSCLL*VNELRPPLSSSSIW Trigger: CCAGATGGAAGAAGAACTTAAGGGAGGTCTCAGTTCATTGACCCAAAGAAGGCATGATACTACAGAAGTCAGCAGTGATACAGTGATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR TCA 90 bp | AGCAAGCAGCATAGTAAGCCACCACCGATGCGGGAGCACATAAACTaGTGCCATTCAATACAAGTATTTGGTGAACTATATGATATATTC | + |
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Preference number: 1 (lower is better) Translates to: SKQHSKPPPMREHIN*CHSIQVFGELYDIF Trigger: GAATATATCATATAGTTCACCAAATACTTGTATTGAATGGCATCAGTTTATGTGCTCCCGCATCGGTGGTGGCTTACTATGCTGCTTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR CCA 90 bp | CTATCTCAATGGGATTCCCTGGCTTTATTTTGGTATTCCCTTGTTTaGGTGAGATTTGCTACTGTCCTTAGTAAATACTTTGCAGACCAG | + |
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Preference number: 1 (lower is better) Translates to: LSQWDSLALFWYSLV*VRFATVLSKYFADQ Trigger: CTGGTCTGCAAAGTATTTACTAAGGACAGTAGCAAATCTCACCCAAACAAGGGAATACCAAAATAAAGCCAGGGAATCCCATTGAGATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR GCA 90 bp | GTACTGAGTTCTTCTCATGACTTATGTTTCCCTTTATTGCATAATTaGAGCCTTCTGGGTAAGAAATACCAAGCGCTAAAGATCTATGCT | + |
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Preference number: 1 (lower is better) Translates to: VLSSSHDLCFPLLHN*SLLGKKYQALKIYA Trigger: AGCATAGATCTTTAGCGCTTGGTATTTCTTACCCAGAAGGCTGCAATTATGCAATAAAGGGAAACATAAGTCATGAGAAGAACTCAGTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR TCA 90 bp | CTTAAGTGTATCAACTGTATGTTCAACCTACTATATACTTCTTGGTaGAACTGTACTTTTGAAACCTGGAAAAGAACCACCACTGCCCTT | + |
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Preference number: 1 (lower is better) Translates to: LKCINCMFNLLYTSW*NCTFETWKRTTTAL Trigger: AAGGGCAGTGGTGGTTCTTTTCCAGGTTTCAAAAGTACAGTTTCACCAAGAAGTATATAGTAGGTTGAACATACAGTTGATACACTTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR CCA 90 bp | CATTCTTACAGGATTCTAAGCTTGGCTTCTGGAATCTTGGAACACTaGGGAGACTTAACTATAACAGGATTTAATCTTAAAAGGCATTTA | + |
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Preference number: 1 (lower is better) Translates to: HSYRILSLASGILEH*GDLTITGFNLKRHL Trigger: TAAATGCCTTTTAAGATTAAATCCTGTTATAGTTAAGTCTCCCCAGTGTTCCAAGATTCCAGAAGCCAAGCTTAGAATCCTGTAAGAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR-3UTR TCA 90 bp | GACCTGCTTGAGTTCCAGTCCTTACTTCCTTTGGTGATAAACAGCAATGTGGACCGGGAGCACATAAACTaGTGCCATTCAATACAAGTA | + |
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Preference number: 2 (lower is better) Translates to: DLLEFQSLLPLVINSNVDREHIN*CHSIQV Trigger: TACTTGTATTGAATGGCATCAGTTTATGTGCTCCCG...GTCCACATTGCTGTTTATCACCAAAGGAAGTAAGGACTGGAACTCAAGCAGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR-3UTR CCA 90 bp | GACCTGCTTGAGTTCCAGTCCTTACTTCCTTTGGTGATAAACAGCAATGTGGACTGTACTTTTGAAACCTaGAAAAGAACCACCACTGCC | + |
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Preference number: 2 (lower is better) Translates to: DLLEFQSLLPLVINSNVDCTFET*KRTTTA Trigger: GGCAGTGGTGGTTCTTTTCCAGGTTTCAAAAGTACA...GTCCACATTGCTGTTTATCACCAAAGGAAGTAAGGACTGGAACTCAAGCAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR-3UTR TCA 90 bp | GCCATGGTCATGGTGTCTCATCATAGCAATAGAAGAGCAATGACTAAGACATATCCTTCTTTGGGTCAATaGACTGAGACCTCCCTTAAG | + |
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Preference number: 2 (lower is better) Translates to: AMVMVSHHSNRRAMTKTYPSLGQ*TETSLK Trigger: CTTAAGGGAGGTCTCAGTTCATTGACCCAAAGAAGG...ATATGTCTTAGTCATTGCTCTTCTATTGCTATGATGAGACACCATGACCATGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR CAA 90 bp | GAGGTGATATGCAGGAGGTATGACATAATTGGAGGGAGTAAGTCATaGGGAAAAGTTGTCCTTGTGAAATGGTCTACTGGTTCCTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: EVICRRYDIIGGSKS*GKVVLVKWSTGSFL Trigger: TAAGAAGGAACCAGTAGACCATTTCACAAGGACAACTTTTCCCAATGACTTACTCCCTCCAATTATGTCATACCTCCTGCATATCACCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR-3UTR TCA 90 bp | CTTCTTGGTGAAACTGTACTTTTGAAACCTGGAAAAGAACCACCACTGCCCTTAGGTATGTGTCTCTATTaGCATCATGTTGGAGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: LLGETVLLKPGKEPPLPLGMCLY*HHVGAS Trigger: AGAAGCTCCAACATGATGTCAATAGAGACACATACC...TAAGGGCAGTGGTGGTTCTTTTCCAGGTTTCAAAAGTACAGTTTCACCAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR-3UTR TCA 90 bp | CTTCTTGGTGAAACTGTACTTTTGAAACCTGGAAAAGAACCACCACTGCCCTTAAACTGGACTTCACTGTaGGATGCTAGCACAATAGTA | + |
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Preference number: 2 (lower is better) Translates to: LLGETVLLKPGKEPPLPLNWTSL*DASTIV Trigger: TACTATTGTGCTAGCATCTCACAGTGAAGTCCAGTT...TAAGGGCAGTGGTGGTTCTTTTCCAGGTTTCAAAAGTACAGTTTCACCAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR-3UTR GCA 90 bp | GACCTGCTTGAGTTCCAGTCCTTACTTCCTTTGGTGATAAACAGCAATGTGGACCCTTTATTGCATAATTaGAGCCTTCTGGGTAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: DLLEFQSLLPLVINSNVDPLLHN*SLLGKK Trigger: TTTCTTACCCAGAAGGCTGCAATTATGCAATAAAGG...GTCCACATTGCTGTTTATCACCAAAGGAAGTAAGGACTGGAACTCAAGCAGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR-3UTR GCA 90 bp | AGTATATTACCAGGAGCAGGTCAACTTTTGAAGGTTTTGACTATTTATTTCCTGCGGGTCTCTGCCCGATaGATTGTCATGCTAAGAATG | + |
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Preference number: 2 (lower is better) Translates to: SILPGAGQLLKVLTIYFLRVSAR*IVMLRM Trigger: CATTCTTAGCATGACAATGCATCGGGCAGAGACCCG...CAGGAAATAAATAGTCAAAACCTTCAAAAGTTGACCTGCTCCTGGTAATATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR-3UTR CCA 90 bp | GCCATGGTCATGGTGTCTCATCATAGCAATAGAAGAGCAATGACTAAGACATATTCTCATGATGCTGGTTaGATAGTAGCAAGCAGCATA | + |
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Preference number: 2 (lower is better) Translates to: AMVMVSHHSNRRAMTKTYSHDAG*IVASSI Trigger: TATGCTGCTTGCTACTATCCAACCAGCATCATGAGA...ATATGTCTTAGTCATTGCTCTTCTATTGCTATGATGAGACACCATGACCATGGC 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR-3UTR CCA 90 bp | GACCTGCTTGAGTTCCAGTCCTTACTTCCTTTGGTGATAAACAGCAATGTGGACGTAAATATACACACATaGAACAGGTGGATTACACAT | + |
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Preference number: 2 (lower is better) Translates to: DLLEFQSLLPLVINSNVDVNIHT*NRWITH Trigger: ATGTGTAATCCACCTGTTCCATGTGTGTATATTTAC...GTCCACATTGCTGTTTATCACCAAAGGAAGTAAGGACTGGAACTCAAGCAGGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR-3UTR GCA 90 bp | CTTCTTGGTGAAACTGTACTTTTGAAACCTGGAAAAGAACCACCACTGCCCTTATTCAGAAGTCTAGTGTaGAAAGTCTTCAAGAAAACA | + |
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Preference number: 2 (lower is better) Translates to: LLGETVLLKPGKEPPLPLFRSLV*KVFKKT Trigger: TGTTTTCTTGAAGACTTTGCACACTAGACTTCTGAA...TAAGGGCAGTGGTGGTTCTTTTCCAGGTTTCAAAAGTACAGTTTCACCAAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR-3UTR GCA 90 bp | AGTATATTACCAGGAGCAGGTCAACTTTTGAAGGTTTTGACTATTTATTTCCTGAGCGCTAAAGATCTATaGTCACACCTACAGTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: SILPGAGQLLKVLTIYFLSAKDL*SHLQCS Trigger: GCTACACTGTAGGTGTGAGCATAGATCTTTAGCGCT...CAGGAAATAAATAGTCAAAACCTTCAAAAGTTGACCTGCTCCTGGTAATATACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR-3UTR GCA 90 bp | GCCATGGTCATGGTGTCTCATCATAGCAATAGAAGAGCAATGACTAAGACATATACTTCTGTAGTATCATaGCTTCTTTGGGTCAATGAA | + |
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Preference number: 2 (lower is better) Translates to: AMVMVSHHSNRRAMTKTYTSVVS*LLWVNE Trigger: TTCATTGACCCAAAGAAGGCATGATACTACAGAAGT...ATATGTCTTAGTCATTGCTCTTCTATTGCTATGATGAGACACCATGACCATGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR CAA 90 bp | TCCTTACTGCATTCTTACAGGATTCTAAGCTTGGCTTCTGGAATCTaGGAACACTGGGGAGACTTAACTATAACAGGATTTAATCTTAAA | + |
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Preference number: 2 (lower is better) Translates to: SLLHSYRILSLASGI*EHWGDLTITGFNLK Trigger: TTTAAGATTAAATCCTGTTATAGTTAAGTCTCCCCAGTGTTCCAAGATTCCAGAAGCCAAGCTTAGAATCCTGTAAGAATGCAGTAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAGACTTAAGCAGTAAATATACACACATGGAACAGGTGGATTACACATTTCTATTGACATCATGTTaGAGCTTCTCACTATGCTAT | + |
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Preference number: 2 (lower is better) Translates to: PGDLSSKYTHMEQVDYTFLLTSC*SFSLCY Trigger: ATAGCATAGTGAGAAGCTCCAACATGATGTCAATAG...AAATGTGTAATCCACCTGTTCCATGTGTGTATATTTACTGCTTAAGTCTCCTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR-3UTR CCA 90 bp | AGTATATTACCAGGAGCAGGTCAACTTTTGAAGGTTTTGACTATTTATTTCCTGGTATCATGCCTTCTTTaGGTCAATGAACTGAGACCT | + |
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Preference number: 2 (lower is better) Translates to: SILPGAGQLLKVLTIYFLVSCLL*VNELRP Trigger: AGGTCTCAGTTCATTGACCCAAAGAAGGCATGATAC...CAGGAAATAAATAGTCAAAACCTTCAAAAGTTGACCTGCTCCTGGTAATATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR-3UTR GCA 90 bp | AGTATATTACCAGGAGCAGGTCAACTTTTGAAGGTTTTGACTATTTATTTCCTGTTCGGAGAGGTGATATaGAGGAGGTATGACATAATT | + |
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Preference number: 2 (lower is better) Translates to: SILPGAGQLLKVLTIYFLFGEVI*RRYDII Trigger: AATTATGTCATACCTCCTGCATATCACCTCTCCGAA...CAGGAAATAAATAGTCAAAACCTTCAAAAGTTGACCTGCTCCTGGTAATATACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR CAA 90 bp | TTATTAATTGTACTGAGTTCTTCTCATGACTTATGTTTCCCTTTATaGCATAATTGCAGCCTTCTGGGTAAGAAATACCAAGCGCTAAAG | + |
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Preference number: 2 (lower is better) Translates to: LLIVLSSSHDLCFPL*HNCSLLGKKYQALK Trigger: CTTTAGCGCTTGGTATTTCTTACCCAGAAGGCTGCAATTATGCAATAAAGGGAAACATAAGTCATGAGAAGAACTCAGTACAATTAATAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR CAA 90 bp | ACAACAGAAGATATCTTCACTTTTCAAGATGAGCTCAATTTGAAGTaGAGATATACAAGTACAGTTTCTCATGATGCTGGTTGGGTAGTA | + |
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Preference number: 2 (lower is better) Translates to: TTEDIFTFQDELNLK*RYTSTVSHDAGWVV Trigger: TACTACCCAACCAGCATCATGAGAAACTGTACTTGTATATCTCAACTTCAAATTGAGCTCATCTTGAAAAGTGAAGATATCTTCTGTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR-3UTR TCA 90 bp | AGTATATTACCAGGAGCAGGTCAACTTTTGAAGGTTTTGACTATTTATTTCCTGAAGAAGAAATGTACATaGCTTGTAAAGACACAACCC | + |
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Preference number: 2 (lower is better) Translates to: SILPGAGQLLKVLTIYFLKKKCT*LVKTQP Trigger: GGGTTGTGTCTTTACAAGTCATGTACATTTCTTCTT...CAGGAAATAAATAGTCAAAACCTTCAAAAGTTGACCTGCTCCTGGTAATATACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR-3UTR GCA 90 bp | AGTATATTACCAGGAGCAGGTCAACTTTTGAAGGTTTTGACTATTTATTTCCTGTATGTTTCCCTTTATTaGATAATTGCAGCCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: SILPGAGQLLKVLTIYFLYVSLY*IIAAFW Trigger: CCAGAAGGCTGCAATTATGCAATAAAGGGAAACATA...CAGGAAATAAATAGTCAAAACCTTCAAAAGTTGACCTGCTCCTGGTAATATACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR-3UTR CCA 90 bp | AGTATATTACCAGGAGCAGGTCAACTTTTGAAGGTTTTGACTATTTATTTCCTGAGTTCTTCTTCCATCTaGTTTATCACAGCAATACAA | + |
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Preference number: 2 (lower is better) Translates to: SILPGAGQLLKVLTIYFLSSSSI*FITAIQ Trigger: TTGTATTGCTGTGATAAACCAGATGGAAGAAGAACT...CAGGAAATAAATAGTCAAAACCTTCAAAAGTTGACCTGCTCCTGGTAATATACT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR GCA 72 bp | AGAGGCATTCCTACAGACAACATGGCCCCGGGTCTCTaGCCGATGCATTGTCATGCTAAGAATGCCTTTCCA | + |
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Preference number: 3 (lower is better) Translates to: RGIPTDNMAPGL*PMHCHAKNAFP Trigger: TGGAAAGGCATTCTTAGCATGACAATGCATCGGGCAGAGACCCGGGGCCATGTTGTCTGTAGGAATGCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR GCA 72 bp | TTCCTACAGACAACATGGCCCCGGGTCTCTGCCCGATaGATTGTCATGCTAAGAATGCCTTTCCATGTTCTA | + |
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Preference number: 3 (lower is better) Translates to: FLQTTWPRVSAR*IVMLRMPFHVL Trigger: TAGAACATGGAAAGGCATTCTTAGCATGACAATGCATCGGGCAGAGACCCGGGGCCATGTTGTCTGTAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR GCA 72 bp | GAGTTATCACAGAGAAAGGAGCTTAAGTTGGGGAAGTaGCTCCATGAGATCGAGCTGTGGAGCATTTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: ELSQRKELKLGK*LHEIELWSIFP Trigger: TGGGAAAATGCTCCACAGCTCGATCTCATGGAGGCACTTCCCCAACTTAAGCTCCTTTCTCTGTGATAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR CCA 72 bp | CCCAGCATGATGGCACACACCTTTATTCCCAGCACTTaGGAAGCAGAGACAGATAGATCTCCAAGTTTGATG | + |
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Preference number: 3 (lower is better) Translates to: PSMMAHTFIPST*EAETDRSPSLM Trigger: CATCAAACTTGGAGATCTATCTGTCTCTGCTTCCCAAGTGCTGGGAATAAAGGTGTGTGCCATCATGCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR CCA 72 bp | CTTAAGTTGGGGAAGTGCCTCCATGAGATCGAGCTGTaGAGCATTTTCCCAATTAGTGATCAAGTAGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: LKLGKCLHEIEL*SIFPISDQVGR Trigger: CCTCCCTACTTGATCACTAATTGGGAAAATGCTCCACAGCTCGATCTCATGGAGGCACTTCCCCAACTTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR GCA 72 bp | CCCTCTGCATATGAGGTACAGTTCGGAGAGGTGATATaGAGGAGGTATGACATAATTGGAGGGAGTAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: PSAYEVQFGEVI*RRYDIIGGSKS Trigger: TGACTTACTCCCTCCAATTATGTCATACCTCCTGCATATCACCTCTCCGAACTGTACCTCATATGCAGAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR TCA 72 bp | GCTGACTTCTGTAGTATCATGCCTTCTTTGGGTCAATaGACTGAGACCTCCCTTAAGTTCTTCTTCCATCTG | + |
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Preference number: 3 (lower is better) Translates to: ADFCSIMPSLGQ*TETSLKFFFHL Trigger: CAGATGGAAGAAGAACTTAAGGGAGGTCTCAGTTCATTGACCCAAAGAAGGCATGATACTACAGAAGTCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR TCA 72 bp | TCCTTTGGTGATAAACAGCAATGTGGACGTGTAAGCTaGATAAACCCTTTCCTCCGCACCTTGCTTTTTGGT | + |
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Preference number: 3 (lower is better) Translates to: SFGDKQQCGRVS*INPFLRTLLFG Trigger: ACCAAAAAGCAAGGTGCGGAGGAAAGGGTTTATTCAGCTTACACGTCCACATTGCTGTTTATCACCAAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR CCA 72 bp | TTGAGATATACAAGTACAGTTTCTCATGATGCTGGTTaGGTAGTAGCAAGCAGCATAGTAAGCCACCACCCA | + |
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Preference number: 3 (lower is better) Translates to: LRYTSTVSHDAG*VVASSIVSHHP Trigger: TGGGTGGTGGCTTACTATGCTGCTTGCTACTACCCAACCAGCATCATGAGAAACTGTACTTGTATATCTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR TCA 72 bp | CTGAAGATCATGATGCAGCTCTCAAGTTATTGCTGCTaGACTAAGTGTTCTACCATGCTCCCCACAACAATA | + |
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Preference number: 3 (lower is better) Translates to: LKIMMQLSSYCC*TKCSTMLPTTI Trigger: TATTGTTGTGGGGAGCATGGTAGAACACTTAGTTCAGCAGCAATAACTTGAGAGCTGCATCATGATCTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR CCA 72 bp | TTGAGATATACAAGTACAGTTTCTCATGATGCTGGTTaGATAGTAGCAAGCAGCATAGTAAGCCACCACCGA | + |
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Preference number: 3 (lower is better) Translates to: LRYTSTVSHDAG*IVASSIVSHHR Trigger: TCGGTGGTGGCTTACTATGCTGCTTGCTACTATCCAACCAGCATCATGAGAAACTGTACTTGTATATCTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
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| 3UTR CCA 72 bp | ACCTGTAGACACAGGGTTGAAGGGGTACAGAATAAATaGCAATGTGGACACCTTTATGTAGCCACAGTTATT | + |
|
Preference number: 3 (lower is better) Translates to: TCRHRVEGVQNK*QCGHLYVATVI Trigger: AATAACTGTGGCTACATAAAGGTGTCCACATTGCCATTTATTCTGTACCCCTTCAACCCTGTGTCTACAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR-3UTR CAA 90 bp | GACCTGCTTGAGTTCCAGTCCTTACTTCCTTTGGTGATAAACAGCAATGTGGACGGAGCAGGTCAACTTTaGAAGGTTTTGACTATTTAT | + |
|
Preference number: 3 (lower is better) Translates to: DLLEFQSLLPLVINSNVDGAGQL*KVLTIY Trigger: ATAAATAGTCAAAACCTTCAAAAGTTGACCTGCTCC...GTCCACATTGCTGTTTATCACCAAAGGAAGTAAGGACTGGAACTCAAGCAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR TCA 72 bp | TTCAAGCATGATGTAATGGCTTGGGCCTGTTATCCTTaGAATAAGAGTGAATTACAGGCTAACCTGGGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: FKHDVMAWACYP*NKSELQANLGS Trigger: TGAACCCAGGTTAGCCTGTAATTCACTCTTATTTCAAGGATAACAGGCCCAAGCCATTACATCATGCTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR TCA 72 bp | CAATTTGAAGTTGAGATATACAAGTACAGTTTCTCATaGTGCTGGTTGGGTAGTAGCAAGCAGCATAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: QFEVEIYKYSFS*CWLGSSKQHSK Trigger: CTTACTATGCTGCTTGCTACTACCCAACCAGCATCATGAGAAACTGTACTTGTATATCTCAACTTCAAATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR TCA 72 bp | TACCAACTTGCTTCTAATATGCAATGTAGCCTGTACTaGAGATTTCTATCTCAATGGGATTCCCTGGCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: YQLASNMQCSLY*RFLSQWDSLAL Trigger: TAAAGCCAGGGAATCCCATTGAGATAGAAATCTTCAGTACAGGCTACATTGCATATTAGAAGCAAGTTGGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR CCA 72 bp | ATCCATTTAAGGTATGTGTCTCTATTGACATCATGTTaGAGCTTCTCACTATGCTATGAACTACCACATAGG | + |
|
Preference number: 3 (lower is better) Translates to: IHLRYVSLLTSC*SFSLCYELPHR Trigger: CCTATGTGGTAGTTCATAGCATAGTGAGAAGCTCCAACATGATGTCAATAGAGACACATACCTTAAATGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR TCA 72 bp | CAATTTGAAGTTGAGATATACAAGTACAGTTTCTCATaGTGCTGGTTGGATAGTAGCAAGCAGCATAGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: QFEVEIYKYSFS*CWLDSSKQHSK Trigger: CTTACTATGCTGCTTGCTACTATCCAACCAGCATCATGAGAAACTGTACTTGTATATCTCAACTTCAAATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR TCA 72 bp | GTACAGAAAATACAAAGGGTAGCAGGCAAAGTACATTaGAGTTACCAGGTACAAAACAAAGGAATGACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: VQKIQRVAGKVH*SYQVQNKGMTS Trigger: TGAAGTCATTCCTTTGTTTTGTACCTGGTAACTTCAATGTACTTTGCCTGCTACCCTTTGTATTTTCTGTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR CCA 72 bp | AGGATTCTAAGCTTGGCTTCTGGAATCTTGGAACACTaGGGAGACTTAACTATAACAGGATTTAATCTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: RILSLASGILEH*GDLTITGFNLK Trigger: TTTAAGATTAAATCCTGTTATAGTTAAGTCTCCCCAGTGTTCCAAGATTCCAGAAGCCAAGCTTAGAATCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR-3UTR CAA 90 bp | TTGCTTTATATTTTCTCTGTATTCCATACTCAAAGCTTGAAGGAAGGTACACACGCCATTTCCATATTGTaGAGCTACATTATCCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LLYIFSVFHTQSLKEGTHAISIL*SYIILS Trigger: ACTCAGGATAATGTAGCTCAACAATATGGAAATGGC...GTGTGTACCTTCCTTCAAGCTTTGAGTATGGAATACAGAGAAAATATAAAGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188374.7 |
||
| 3UTR TCA 72 bp | AAGTACATTGAAGTTACCAGGTACAAAACAAAGGAATaGCTTCAAAAGGATTTACAGGAACCAGGTAGATGT | + |
|
Preference number: 3 (lower is better) Translates to: KYIEVTRYKTKE*LQKDLQEPGRC Trigger: ACATCTACCTGGTTCCTGTAAATCCTTTTGAAGTCATTCCTTTGTTTTGTACCTGGTAACTTCAATGTACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR CAA 72 bp | AAGCCACCACCCACAAGGTACCCTGGGCAGGTAATCTaGGGTTCTATAAGCAAGCAAGCTGAGCAAGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: KPPPTRYPGQVI*GSISKQAEQAV Trigger: CACGGCTTGCTCAGCTTGCTTGCTTATAGAACCCAAGATTACCTGCCCAGGGTACCTTGTGGGTGGTGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| CDS-3UTR TCA 90 bp | ATGACTAGAGGCATTCCTACAGACAACATGGCCCCGGGTCTCTGCCCGATGCATGGTTTCTCCCCACAGTaGATCCTTTCATGGCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: MTRGIPTDNMAPGLCPMHGFSPQ*ILSWHR Trigger: TCGATGCCATGAAAGGATTCACTGTGGGGAGAAACC...ATGCATCGGGCAGAGACCCGGGGCCATGTTGTCTGTAGGAATGCCTCTAGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| CDS-3UTR GCA 90 bp | ATGACTAGAGGCATTCCTACAGACAACATGGCCCCGGGTCTCTGCCCGATGCATGTGCCACTGTCTTTATaGTTCAGAAAGCATTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MTRGIPTDNMAPGLCPMHVPLSL*FRKHSG Trigger: TCCAGAATGCTTTCTGAAGCATAAAGACAGTGGCAC...ATGCATCGGGCAGAGACCCGGGGCCATGTTGTCTGTAGGAATGCCTCTAGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR CAA 72 bp | AGCACTTGGGAAGCAGAGACAGATAGATCTCCAAGTTaGATGCCAGTCTGGTCTAAGGAACCAGCTCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: STWEAETDRSPS*MPVWSKEPALG Trigger: CCCTAGAGCTGGTTCCTTAGACCAGACTGGCATCAAACTTGGAGATCTATCTGTCTCTGCTTCCCAAGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR CAA 72 bp | GGCCTTGTTGGAGGAAGGGTGTCACTAGAAGTGATCTaGGGGGTTTCACAAAGGTCATACCAGGCTAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLVGGRVSLEVI*GVSQRSYQAKL Trigger: AAGCTTAGCCTGGTATGACCTTTGTGAAACCCCCAAGATCACTTCTAGTGACACCCTTCCTCCAACAAGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR CAA 72 bp | AACAGGTTAGAGTTATCACAGAGAAAGGAGCTTAAGTaGGGGAAGTGCCTCCATGAGATCGAGCTGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NRLELSQRKELK*GKCLHEIELWS Trigger: GCTCCACAGCTCGATCTCATGGAGGCACTTCCCCAACTTAAGCTCCTTTCTCTGTGATAACTCTAACCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| CDS-3UTR TCA 90 bp | GACCTGCTTGAGTTCCAGTCCTTACTTCCTTTGGTGATAAACAGCAATGTGGACGGTTTGTGTGGAGTCTaGAGAGGCACAGATACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: DLLEFQSLLPLVINSNVDGLCGV*RGTDTV Trigger: TACTGTATCTGTGCCTCTTCAGACTCCACACAAACC...GTCCACATTGCTGTTTATCACCAAAGGAAGTAAGGACTGGAACTCAAGCAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR CAA 72 bp | TCTTGGGGGTTTCACAAAGGTCATACCAGGCTAAGCTaGCTCTCTCTTGTTCTGAAGATCATGATGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SWGFHKGHTRLS*LSLVLKIMMQL Trigger: GAGCTGCATCATGATCTTCAGAACAAGAGAGAGCAAGCTTAGCCTGGTATGACCTTTGTGAAACCCCCAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| CDS-3UTR TCA 90 bp | CTTCTTGGTGAAACTGTACTTTTGAAACCTGGAAAAGAACCACCACTGCCCTTATTCATGGCGTTGAAGTaGACTATGTCCAGTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLGETVLLKPGKEPPLPLFMALK*TMSSEG Trigger: GCCTTCACTGGACATAGTTCACTTCAACGCCATGAA...TAAGGGCAGTGGTGGTTCTTTTCCAGGTTTCAAAAGTACAGTTTCACCAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| CDS-3UTR TCA 90 bp | GACCTGCTTGAGTTCCAGTCCTTACTTCCTTTGGTGATAAACAGCAATGTGGACAGATACAGTAAGAGATaGCTGACTAATGAGCACGTT | + |
|
Preference number: 4 (lower is better) Translates to: DLLEFQSLLPLVINSNVDRYSKR*LTNEHV Trigger: AACGTGCTCATTAGTCAGTCATCTCTTACTGTATCT...GTCCACATTGCTGTTTATCACCAAAGGAAGTAAGGACTGGAACTCAAGCAGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| CDS-3UTR CCA 90 bp | GACCTGCTTGAGTTCCAGTCCTTACTTCCTTTGGTGATAAACAGCAATGTGGACTCCTCATCTATGTTCTaGCCTTCTTGTGTTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DLLEFQSLLPLVINSNVDSSSMF*PSCVFP Trigger: AGGAAAAACACAAGAAGGCCAGAACATAGATGAGGA...GTCCACATTGCTGTTTATCACCAAAGGAAGTAAGGACTGGAACTCAAGCAGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR CAA 72 bp | TGCAGGAGGTATGACATAATTGGAGGGAGTAAGTCATaGGGAAAAGTTGTCCTTGTGAAATGGTCTACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CRRYDIIGGSKS*GKVVLVKWSTG Trigger: ACCAGTAGACCATTTCACAAGGACAACTTTTCCCAATGACTTACTCCCTCCAATTATGTCATACCTCCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| CDS-3UTR CCA 90 bp | CTTCTTGGTGAAACTGTACTTTTGAAACCTGGAAAAGAACCACCACTGCCCTTATTGTGCAGCTTCTTTTaGGAAGGATCTAGTAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLGETVLLKPGKEPPLPLLCSFF*EGSSKA Trigger: GGCTTTACTAGATCCTTCCCAAAAGAAGCTGCACAA...TAAGGGCAGTGGTGGTTCTTTTCCAGGTTTCAAAAGTACAGTTTCACCAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| CDS-3UTR CCA 90 bp | GACCTGCTTGAGTTCCAGTCCTTACTTCCTTTGGTGATAAACAGCAATGTGGACGTTCACAATGGTGTTTaGAATCTGTCTGAAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: DLLEFQSLLPLVINSNVDVHNGV*NLSEDF Trigger: GAAATCTTCAGACAGATTCCAAACACCATTGTGAAC...GTCCACATTGCTGTTTATCACCAAAGGAAGTAAGGACTGGAACTCAAGCAGGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR CAA 72 bp | AGTATATTACCAGGAGCAGGTCAACTTTTGAAGGTTTaGACTATTTATTTCCTGGCTGCTGGTAGCAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SILPGAGQLLKV*TIYFLAAGSSQ Trigger: TTGGCTGCTACCAGCAGCCAGGAAATAAATAGTCAAAACCTTCAAAAGTTGACCTGCTCCTGGTAATATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR CAA 72 bp | TTAACTTCCTTACTGCATTCTTACAGGATTCTAAGCTaGGCTTCTGGAATCTTGGAACACTGGGGAGACTTA | + |
|
Preference number: 4 (lower is better) Translates to: LTSLLHSYRILS*ASGILEHWGDL Trigger: TAAGTCTCCCCAGTGTTCCAAGATTCCAGAAGCCAAGCTTAGAATCCTGTAAGAATGCAGTAAGGAAGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR CAA 72 bp | GGTAGAGAAAGTATATTACCAGGAGCAGGTCAACTTTaGAAGGTTTTGACTATTTATTTCCTGGCTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRESILPGAGQL*KVLTIYFLAAG Trigger: ACCAGCAGCCAGGAAATAAATAGTCAAAACCTTCAAAAGTTGACCTGCTCCTGGTAATATACTTTCTCTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR CAA 72 bp | CATTCTTACAGGATTCTAAGCTTGGCTTCTGGAATCTaGGAACACTGGGGAGACTTAACTATAACAGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: HSYRILSLASGI*EHWGDLTITGF Trigger: AAATCCTGTTATAGTTAAGTCTCCCCAGTGTTCCAAGATTCCAGAAGCCAAGCTTAGAATCCTGTAAGAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| CDS-3UTR TCA 90 bp | CCAGGAGACTTAAGCAGTAAATATACACACATGGAACAGGTGGATTACACATTTTGGAATTATAGTAACTaGAGGCTTTCCCACATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGDLSSKYTHMEQVDYTFWNYSN*RLSHIA Trigger: AGCAATGTGGGAAAGCCTTCAGTTACTATAATTCCA...AAATGTGTAATCCACCTGTTCCATGTGTGTATATTTACTGCTTAAGTCTCCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR CAA 72 bp | AAGATTTCTATCTCAATGGGATTCCCTGGCTTTATTTaGGTATTCCCTTGTTTGGGTGAGATTTGCTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KISISMGFPGFI*VFPCLGEICYC Trigger: ACAGTAGCAAATCTCACCCAAACAAGGGAATACCAAAATAAAGCCAGGGAATCCCATTGAGATAGAAATCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| CDS-3UTR CCA 90 bp | TTGCTTTATATTTTCTCTGTATTCCATACTCAAAGCTTGAAGGAAGGTACACACTTGTGCAGCTTCTTTTaGGAAGGATCTAGTAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLYIFSVFHTQSLKEGTHLCSFF*EGSSKA Trigger: GGCTTTACTAGATCCTTCCCAAAAGAAGCTGCACAA...GTGTGTACCTTCCTTCAAGCTTTGAGTATGGAATACAGAGAAAATATAAAGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188374.7 |
||
| 3UTR CAA 72 bp | GTACTGAGTTCTTCTCATGACTTATGTTTCCCTTTATaGCATAATTGCAGCCTTCTGGGTAAGAAATACCAA | + |
|
Preference number: 4 (lower is better) Translates to: VLSSSHDLCFPL*HNCSLLGKKYQ Trigger: TTGGTATTTCTTACCCAGAAGGCTGCAATTATGCAATAAAGGGAAACATAAGTCATGAGAAGAACTCAGTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR CAA 72 bp | TCAACCTACTATATACTTCTTGGTGAAACTGTACTTTaGAAACCTGGAAAAGAACCACCACTGCCCTTATTA | + |
|
Preference number: 4 (lower is better) Translates to: STYYILLGETVL*KPGKEPPLPLL Trigger: TAATAAGGGCAGTGGTGGTTCTTTTCCAGGTTTCAAAAGTACAGTTTCACCAAGAAGTATATAGTAGGTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR CAA 72 bp | CTGGAGAATCTCCATTTGTCAGAAGAATTTACCAACTaGCTTCTAATATGCAATGTAGCCTGTACTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LENLHLSEEFTN*LLICNVACTED Trigger: ATCTTCAGTACAGGCTACATTGCATATTAGAAGCAAGTTGGTAAATTCTTCTGACAAATGGAGATTCTCCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR CAA 72 bp | AGTACAGAAAATACAAAGGGTAGCAGGCAAAGTACATaGAAGTTACCAGGTACAAAACAAAGGAATGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: STENTKGSRQST*KLPGTKQRNDF Trigger: GAAGTCATTCCTTTGTTTTGTACCTGGTAACTTCAATGTACTTTGCCTGCTACCCTTTGTATTTTCTGTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| CDS-3UTR TCA 90 bp | AGTATATTACCAGGAGCAGGTCAACTTTTGAAGGTTTTGACTATTTATTTCCTGAGTTTGTCAAATAACTaGAAGCCTTACCACAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SILPGAGQLLKVLTIYFLSLSNN*KPYHRH Trigger: ATGCCTGTGGTAAGGCTTTCAGTTATTTGACAAACT...CAGGAAATAAATAGTCAAAACCTTCAAAAGTTGACCTGCTCCTGGTAATATACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| CDS-3UTR CCA 90 bp | TTGCTTTATATTTTCTCTGTATTCCATACTCAAAGCTTGAAGGAAGGTACACACTCCTCATCTATGTTCTaGCCTTCTTGTGTTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLYIFSVFHTQSLKEGTHSSSMF*PSCVFP Trigger: AGGAAAAACACAAGAAGGCCAGAACATAGATGAGGA...GTGTGTACCTTCCTTCAAGCTTTGAGTATGGAATACAGAGAAAATATAAAGCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000188374.7 |
||
| CDS-3UTR CCA 90 bp | GGGAGAAATGCTTTAAATTACATCACCTTGAAGTTGAGCTTATTGGGATGTTGTCTTCTAGAATATCTATaGTCCTCATCTATGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRNALNYITLKLSLLGCCLLEYL*SSSMFW Trigger: CCAGAACATAGATGAGGACCATAGATATTCTAGAAG...ACAACATCCCAATAAGCTCAACTTCAAGGTGATGTAATTTAAAGCATTTCTCCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188374.7 |
||
| 3UTR CAA 72 bp | ACTTCTCTATACATCCATTTAAGGTATGTGTCTCTATaGACATCATGTTGGAGCTTCTCACTATGCTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TSLYIHLRYVSL*TSCWSFSLCYE Trigger: TTCATAGCATAGTGAGAAGCTCCAACATGATGTCAATAGAGACACATACCTTAAATGGATGTATAGAGAAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR CAA 72 bp | GATATCTTCACTTTTCAAGATGAGCTCAATTTGAAGTaGAGATATACAAGTACAGTTTCTCATGATGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DIFTFQDELNLK*RYTSTVSHDAG Trigger: ACCAGCATCATGAGAAACTGTACTTGTATATCTCAACTTCAAATTGAGCTCATCTTGAAAAGTGAAGATATC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| 3UTR CAA 72 bp | GCACTTTTTGGGAGAAATGCTTTAAATTACATCACCTaGAAGTTGAGCTTATTGGGATGTTGTCTTGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALFGRNALNYIT*KLSLLGCCLDF Trigger: AAAATCAAGACAACATCCCAATAAGCTCAACTTCAAGGTGATGTAATTTAAAGCATTTCTCCCAAAAAGTGC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000188374.7 |
||
| CDS-3UTR CAA 90 bp | ATGACTAGAGGCATTCCTACAGACAACATGGCCCCGGGTCTCTGCCCGATGCATTCCTCCATTACATCTTaGTGCAGCTTCTTTTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: MTRGIPTDNMAPGLCPMHSSITS*CSFFWE Trigger: TTCCCAAAAGAAGCTGCACAAAGATGTAATGGAGGA...ATGCATCGGGCAGAGACCCGGGGCCATGTTGTCTGTAGGAATGCCTCTAGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| CDS-3UTR CAA 90 bp | ATGACTAGAGGCATTCCTACAGACAACATGGCCCCGGGTCTCTGCCCGATGCATTTACTTTCAGTACCTTaGCTATGCTCCAACAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: MTRGIPTDNMAPGLCPMHLLSVP*LCSNSL Trigger: AAGACTGTTGGAGCATAGCAAAGGTACTGAAAGTAA...ATGCATCGGGCAGAGACCCGGGGCCATGTTGTCTGTAGGAATGCCTCTAGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| CDS TCA 90 bp | ATGAGGTTTGTGTGGAGTCTGAAGAGGCACAGATACAGTAAGAGATaGCTGACTAATGAGCACGTTGTCCTTGTACACATGGTTTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: MRFVWSLKRHRYSKR*LTNEHVVLVHMVFT Trigger: AGTGAAAACCATGTGTACAAGGACAACGTGCTCATTAGTCAGTCATCTCTTACTGTATCTGTGCCTCTTCAGACTCCACACAAACCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034259.8 ENSMUST00000188685.7 |
||
| CDS-3UTR CAA 90 bp | CTTCTTGGTGAAACTGTACTTTTGAAACCTGGAAAAGAACCACCACTGCCCTTAATGAGCACGTTGTCCTaGTACACATGGTTTTCACTA | + |
|
Preference number: 5 (lower is better) Translates to: LLGETVLLKPGKEPPLPLMSTLS*YTWFSL Trigger: TAGTGAAAACCATGTGTACAAGGACAACGTGCTCAT...TAAGGGCAGTGGTGGTTCTTTTCCAGGTTTCAAAAGTACAGTTTCACCAAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| CDS TCA 90 bp | AGCACGTTGTCCTTGTACACATGGTTTTCACTAAGCATTGTTCTATaGGAACTTTTCCTGTTCACAATGGTGTTTGGAATCTGTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: STLSLYTWFSLSIVL*ELFLFTMVFGICLK Trigger: CTTCAGACAGATTCCAAACACCATTGTGAACAGGAAAAGTTCTCATAGAACAATGCTTAGTGAAAACCATGTGTACAAGGACAACGTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034259.8 ENSMUST00000188685.7 |
||
| CDS-3UTR CAA 90 bp | AGTATATTACCAGGAGCAGGTCAACTTTTGAAGGTTTTGACTATTTATTTCCTGAGGGTACTGGAAGAATaGAAACCTTTCCCGCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: SILPGAGQLLKVLTIYFLRVLEE*KPFPHC Trigger: GCAATGCGGGAAAGGTTTCAATTCTTCCAGTACCCT...CAGGAAATAAATAGTCAAAACCTTCAAAAGTTGACCTGCTCCTGGTAATATACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000188685.7 |
||
| CDS TCA 90 bp | GTACCTTTGCTATGCTCCAACAGTCTTTCCACAACTTCATTTCTTTaGTTTCTTCTAGAATATCTATGGTCCTCATCTATGTTCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VPLLCSNSLSTTSFL*FLLEYLWSSSMFWP Trigger: AGGCCAGAACATAGATGAGGACCATAGATATTCTAGAAGAAATCAAAGAAATGAAGTTGTGGAAAGACTGTTGGAGCATAGCAAAGGTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034259.8 ENSMUST00000188685.7 |
||
| CDS-3UTR CAA 90 bp | GGGAGAAATGCTTTAAATTACATCACCTTGAAGTTGAGCTTATTGGGATGTTGTTCCTCCATTACATCTTaGTGCAGCTTCTTTTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: GRNALNYITLKLSLLGCCSSITS*CSFFWE Trigger: TTCCCAAAAGAAGCTGCACAAAGATGTAATGGAGGA...ACAACATCCCAATAAGCTCAACTTCAAGGTGATGTAATTTAAAGCATTTCTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188374.7 |
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| CDS TCA 72 bp | GTGTGGAGTCTGAAGAGGCACAGATACAGTAAGAGATaGCTGACTAATGAGCACGTTGTCCTTGTACACATG | + |
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Preference number: 6 (lower is better) Translates to: VWSLKRHRYSKR*LTNEHVVLVHM Trigger: CATGTGTACAAGGACAACGTGCTCATTAGTCAGTCATCTCTTACTGTATCTGTGCCTCTTCAGACTCCACAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034259.8 ENSMUST00000188685.7 |
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