Pregenerated sensors for ZFP708 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058883Ensembl transcript IDs: ENSMUST00000109742.11, ENSMUST00000109743.5, ENSMUST00000190566.3
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TCTCCAATCTCTCAAGATTTACATGATGAGCAAAGTGTTGCAACACTGTTTACAAGTTCCTGTATTACCTaGATTTGTAGTGTTTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: SPISQDLHDEQSVATLFTSSCIT*ICSVSL Trigger: TAGAGAAACACTACAAATGCAGGTAATACAGGAACT...TGTAAACAGTGTTGCAACACTTTGCTCATCATGTAAATCTTGAGAGATTGGAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| 3UTR-3UTR GCA 90 bp | ATCTCTCAAGATTTACATGATGAGCAAAGTGTTGCAACACTGTTTACAAAGTGCAGTTCCTGTATTACCTaGATTTGTAGTGTTTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: ISQDLHDEQSVATLFTKCSSCIT*ICSVSL Trigger: TAGAGAAACACTACAAATGCAGGTAATACAGGAACT...GCACTTTGTAAACAGTGTTGCAACACTTTGCTCATCATGTAAATCTTGAGAGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| 3UTR-3UTR CCA 90 bp | TTCTTAGTGAGTTCAGAGTTCTGTATTAATTCTTTAGGAATTCAGAGCAGCACTATCCTATACAGCTCCTaGAATTTGTCTCTTATGATA | + |
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Preference number: 2 (lower is better) Translates to: FLVSSEFCINSLGIQSSTILYSS*NLSLMI Trigger: TATCATAAGAGACAAATTCCAGGAGCTGTATAGGAT...AGTGCTGCTCTGAATTCCTAAAGAATTAATACAGAACTCTGAACTCACTAAGAA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| 3UTR-3UTR CAA 90 bp | ACGGCCATCTTCTTCACTATTACAAGATCTCTCCAGTATGTAATGGTGGATGTTTTCTTTAGTGCTGAATaGTCAATGAACAACTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: TAIFFTITRSLQYVMVDVFFSAE*SMNNCG Trigger: TCCACAGTTGTTCATTGACAATTCAGCACTAAAGAA...AACATCCACCATTACATACTGGAGAGATCTTGTAATAGTGAAGAAGATGGCCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| 3UTR CCA 72 bp | TTCTGTATTAATTCTTTAGGAATTCAGAGCAGCACTTaGTGGCTTGCTAAATCCTATACAGCTCCTGGAATT | + |
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Preference number: 3 (lower is better) Translates to: FCINSLGIQSST*WLAKSYTAPGI Trigger: AATTCCAGGAGCTGTATAGGATTTAGCAAGCCACCAAGTGCTGCTCTGAATTCCTAAAGAATTAATACAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| 3UTR-3UTR CAA 90 bp | ATCTCTCAAGATTTACATGATGAGCAAAGTGTTGCAACACTGTTTACAAAGTGCTTCTTTAGTGCTGAATaGTCAATGAACAACTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: ISQDLHDEQSVATLFTKCFFSAE*SMNNCG Trigger: TCCACAGTTGTTCATTGACAATTCAGCACTAAAGAA...GCACTTTGTAAACAGTGTTGCAACACTTTGCTCATCATGTAAATCTTGAGAGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| 3UTR-3UTR CAA 90 bp | ATCTCTCAAGATTTACATGATGAGCAAAGTGTTGCAACACTGTTTACAAAGTGCCTCAGTTTTATGTATTaGTCAGTGTTCCTTCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: ISQDLHDEQSVATLFTKCLSFMY*SVFLPK Trigger: CTTTGGAAGGAACACTGACAAATACATAAAACTGAG...GCACTTTGTAAACAGTGTTGCAACACTTTGCTCATCATGTAAATCTTGAGAGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| 3UTR-3UTR CAA 90 bp | TTCTTAGTGAGTTCAGAGTTCTGTATTAATTCTTTAGGAATTCAGAGCAGCACTCTCAGTTTTATGTATTaGTCAGTGTTCCTTCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: FLVSSEFCINSLGIQSSTLSFMY*SVFLPK Trigger: CTTTGGAAGGAACACTGACAAATACATAAAACTGAG...AGTGCTGCTCTGAATTCCTAAAGAATTAATACAGAACTCTGAACTCACTAAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| 3UTR GCA 72 bp | CATGATGAGCAAAGTGTTGCAACACTGTTTACAAAGTaGTTTTTACTGAACCAGTTTGGTTTTCTCAGTTTT | + |
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Preference number: 3 (lower is better) Translates to: HDEQSVATLFTK*FLLNQFGFLSF Trigger: AAAACTGAGAAAACCAAACTGGTTCAGTAAAAAGCACTTTGTAAACAGTGTTGCAACACTTTGCTCATCATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR TCA 90 bp | ACGGCCATCTTCTTCACTATTACAAGATCTCTCCAGTATGTAATGGTGGATGTTGAATGCAGCGACCGGTaGAGGCCATGCCACATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TAIFFTITRSLQYVMVDVECSDR*RPCHIL Trigger: AAGAATGTGGCATGGCCTTCACCGGTCGCTGCATTC...AACATCCACCATTACATACTGGAGAGATCTTGTAATAGTGAAGAAGATGGCCGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR TCA 90 bp | TCTCCAATCTCTCAAGATTTACATGATGAGCAAAGTGTTGCAACACTGTTTACAGAATGCAGCGACCGGTaGAGGCCATGCCACATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPISQDLHDEQSVATLFTECSDR*RPCHIL Trigger: AAGAATGTGGCATGGCCTTCACCGGTCGCTGCATTC...TGTAAACAGTGTTGCAACACTTTGCTCATCATGTAAATCTTGAGAGATTGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR TCA 90 bp | ACGGCCATCTTCTTCACTATTACAAGATCTCTCCAGTATGTAATGGTGGATGTTCACACTCCACAGATCTaGACTCTGCTCCAGAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: TAIFFTITRSLQYVMVDVHTPQI*TLLQKC Trigger: ACATTTCTGGAGCAGAGTTCAGATCTGTGGAGTGTG...AACATCCACCATTACATACTGGAGAGATCTTGTAATAGTGAAGAAGATGGCCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR CCA 90 bp | ACGGCCATCTTCTTCACTATTACAAGATCTCTCCAGTATGTAATGGTGGATGTTTTGATCCTAGATGGATaGCCACTGATGCCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TAIFFTITRSLQYVMVDVLILDG*PLMPSS Trigger: AGAGGAAGGCATCAGTGGCCATCCATCTAGGATCAA...AACATCCACCATTACATACTGGAGAGATCTTGTAATAGTGAAGAAGATGGCCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR TCA 90 bp | TTCTGTATTAATTCTTTAGGAATTCAGAGCAGCACTTGGTGGCTTGCTAAATCCCACACTCCACAGATCTaGACTCTGCTCCAGAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: FCINSLGIQSSTWWLAKSHTPQI*TLLQKC Trigger: ACATTTCTGGAGCAGAGTTCAGATCTGTGGAGTGTG...GGATTTAGCAAGCCACCAAGTGCTGCTCTGAATTCCTAAAGAATTAATACAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR GCA 90 bp | TTCTGTATTAATTCTTTAGGAATTCAGAGCAGCACTTGGTGGCTTGCTAAATCCCACAGATCTGAACTCTaGTCCAGAAATGTGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FCINSLGIQSSTWWLAKSHRSEL*SRNVTR Trigger: CCTGGTCACATTTCTGGAGCAGAGTTCAGATCTGTG...GGATTTAGCAAGCCACCAAGTGCTGCTCTGAATTCCTAAAGAATTAATACAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR CCA 90 bp | GAGCAAAGTGTTGCAACACTGTTTACAAAGTGCTTTTTACTGAACCAGTTTGGTGCTTTTGATCCTAGATaGATGGCCACTGATGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EQSVATLFTKCFLLNQFGAFDPR*MATDAF Trigger: GAAGGCATCAGTGGCCATCCATCTAGGATCAAAAGC...ACCAAACTGGTTCAGTAAAAAGCACTTTGTAAACAGTGTTGCAACACTTTGCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR TCA 90 bp | TCTCCAATCTCTCAAGATTTACATGATGAGCAAAGTGTTGCAACACTGTTTACACACACTCCACAGATCTaGACTCTGCTCCAGAAATGT | + |
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Preference number: 4 (lower is better) Translates to: SPISQDLHDEQSVATLFTHTPQI*TLLQKC Trigger: ACATTTCTGGAGCAGAGTTCAGATCTGTGGAGTGTG...TGTAAACAGTGTTGCAACACTTTGCTCATCATGTAAATCTTGAGAGATTGGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR TCA 90 bp | ACGGCCATCTTCTTCACTATTACAAGATCTCTCCAGTATGTAATGGTGGATGTTATTTGTTGGTGTTGGTaGAGGTTAGAAGAACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TAIFFTITRSLQYVMVDVICWCW*RLEEQL Trigger: CAGCTGTTCTTCTAACCTTCACCAACACCAACAAAT...AACATCCACCATTACATACTGGAGAGATCTTGTAATAGTGAAGAAGATGGCCGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR TCA 90 bp | GAGCAAAGTGTTGCAACACTGTTTACAAAGTGCTTTTTACTGAACCAGTTTGGTTTAGAGAGTGATGTGTaGACACTAAAGGCCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EQSVATLFTKCFLLNQFGLESDV*TLKALP Trigger: TGGCAAGGCCTTTAGTGTTCACACATCACTCTCTAA...ACCAAACTGGTTCAGTAAAAAGCACTTTGTAAACAGTGTTGCAACACTTTGCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR GCA 90 bp | GCAAAGTGTTGCAACACTGTTTACAAAGTGCTTTTTACTGAACCAGTTTGGTTTCACAGATCTGAACTCTaGTCCAGAAATGTGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: AKCCNTVYKVLFTEPVWFHRSEL*SRNVTR Trigger: CCTGGTCACATTTCTGGAGCAGAGTTCAGATCTGTG...AAACCAAACTGGTTCAGTAAAAAGCACTTTGTAAACAGTGTTGCAACACTTTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR GCA 90 bp | ATCTCTCAAGATTTACATGATGAGCAAAGTGTTGCAACACTGTTTACAAAGTGCCACAGATCTGAACTCTaGTCCAGAAATGTGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: ISQDLHDEQSVATLFTKCHRSEL*SRNVTR Trigger: CCTGGTCACATTTCTGGAGCAGAGTTCAGATCTGTG...GCACTTTGTAAACAGTGTTGCAACACTTTGCTCATCATGTAAATCTTGAGAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR CCA 90 bp | TCTCCAATCTCTCAAGATTTACATGATGAGCAAAGTGTTGCAACACTGTTTACATTGATCCTAGATGGATaGCCACTGATGCCTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: SPISQDLHDEQSVATLFTLILDG*PLMPSS Trigger: AGAGGAAGGCATCAGTGGCCATCCATCTAGGATCAA...TGTAAACAGTGTTGCAACACTTTGCTCATCATGTAAATCTTGAGAGATTGGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR CCA 90 bp | TCTCCAATCTCTCAAGATTTACATGATGAGCAAAGTGTTGCAACACTGTTTACAGCTTTTGATCCTAGATaGATGGCCACTGATGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: SPISQDLHDEQSVATLFTAFDPR*MATDAF Trigger: GAAGGCATCAGTGGCCATCCATCTAGGATCAAAAGC...TGTAAACAGTGTTGCAACACTTTGCTCATCATGTAAATCTTGAGAGATTGGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR TCA 90 bp | TCTCCAATCTCTCAAGATTTACATGATGAGCAAAGTGTTGCAACACTGTTTACATTAGAGAGTGATGTGTaGACACTAAAGGCCTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: SPISQDLHDEQSVATLFTLESDV*TLKALP Trigger: TGGCAAGGCCTTTAGTGTTCACACATCACTCTCTAA...TGTAAACAGTGTTGCAACACTTTGCTCATCATGTAAATCTTGAGAGATTGGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR TCA 90 bp | ACGGCCATCTTCTTCACTATTACAAGATCTCTCCAGTATGTAATGGTGGATGTTATGTTGAACAAGGGGTaGAGGATATTTGAAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: TAIFFTITRSLQYVMVDVMLNKG*RIFEGL Trigger: AAGACCTTCAAATATCCTTCACCCCTTGTTCAACAT...AACATCCACCATTACATACTGGAGAGATCTTGTAATAGTGAAGAAGATGGCCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR CCA 90 bp | CAGTGTTCCTTCCAAAGTCATTTTGCATGTATAACATCTGGTTATAAATCACTCTTGATCCTAGATGGATaGCCACTGATGCCTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: QCSFQSHFACITSGYKSLLILDG*PLMPSS Trigger: AGAGGAAGGCATCAGTGGCCATCCATCTAGGATCAA...GAGTGATTTATAACCAGATGTTATACATGCAAAATGACTTTGGAAGGAACACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR TCA 90 bp | GCAAAGTGTTGCAACACTGTTTACAAAGTGCTTTTTACTGAACCAGTTTGGTTTATTTGTTGGTGTTGGTaGAGGTTAGAAGAACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: AKCCNTVYKVLFTEPVWFICWCW*RLEEQL Trigger: CAGCTGTTCTTCTAACCTTCACCAACACCAACAAAT...AAACCAAACTGGTTCAGTAAAAAGCACTTTGTAAACAGTGTTGCAACACTTTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR TCA 90 bp | ATCTCTCAAGATTTACATGATGAGCAAAGTGTTGCAACACTGTTTACAAAGTGCATTTGTTGGTGTTGGTaGAGGTTAGAAGAACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: ISQDLHDEQSVATLFTKCICWCW*RLEEQL Trigger: CAGCTGTTCTTCTAACCTTCACCAACACCAACAAAT...GCACTTTGTAAACAGTGTTGCAACACTTTGCTCATCATGTAAATCTTGAGAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR TCA 90 bp | ACGGCCATCTTCTTCACTATTACAAGATCTCTCCAGTATGTAATGGTGGATGTTCCAGTGTGGATTCTTTaGTGTTTATGCAGATATGTA | + |
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Preference number: 4 (lower is better) Translates to: TAIFFTITRSLQYVMVDVPVWIL*CLCRYV Trigger: TACATATCTGCATAAACATCAAAGAATCCACACTGG...AACATCCACCATTACATACTGGAGAGATCTTGTAATAGTGAAGAAGATGGCCGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR TCA 90 bp | ACGGCCATCTTCTTCACTATTACAAGATCTCTCCAGTATGTAATGGTGGATGTTTTAGAGAATGTTGAGTaGACACTAAAGGTCTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: TAIFFTITRSLQYVMVDVLENVE*TLKVFP Trigger: TGGAAAGACCTTTAGTGTTCACTCAACATTCTCTAA...AACATCCACCATTACATACTGGAGAGATCTTGTAATAGTGAAGAAGATGGCCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR TCA 90 bp | TTCTGTATTAATTCTTTAGGAATTCAGAGCAGCACTTGGTGGCTTGCTAAATCCATGTTGAACAAGGGGTaGAGGATATTTGAAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: FCINSLGIQSSTWWLAKSMLNKG*RIFEGL Trigger: AAGACCTTCAAATATCCTTCACCCCTTGTTCAACAT...GGATTTAGCAAGCCACCAAGTGCTGCTCTGAATTCCTAAAGAATTAATACAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR TCA 90 bp | TTCTGTATTAATTCTTTAGGAATTCAGAGCAGCACTTGGTGGCTTGCTAAATCCTTAGAGAATGTTGAGTaGACACTAAAGGTCTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: FCINSLGIQSSTWWLAKSLENVE*TLKVFP Trigger: TGGAAAGACCTTTAGTGTTCACTCAACATTCTCTAA...GGATTTAGCAAGCCACCAAGTGCTGCTCTGAATTCCTAAAGAATTAATACAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR TCA 90 bp | TCTCCAATCTCTCAAGATTTACATGATGAGCAAAGTGTTGCAACACTGTTTACAATGTTGAACAAGGGGTaGAGGATATTTGAAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SPISQDLHDEQSVATLFTMLNKG*RIFEGL Trigger: AAGACCTTCAAATATCCTTCACCCCTTGTTCAACAT...TGTAAACAGTGTTGCAACACTTTGCTCATCATGTAAATCTTGAGAGATTGGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR TCA 90 bp | GCAAAGTGTTGCAACACTGTTTACAAAGTGCTTTTTACTGAACCAGTTTGGTTTCCAGTGTGGATTCTTTaGTGTTTATGCAGATATGTA | + |
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Preference number: 4 (lower is better) Translates to: AKCCNTVYKVLFTEPVWFPVWIL*CLCRYV Trigger: TACATATCTGCATAAACATCAAAGAATCCACACTGG...AAACCAAACTGGTTCAGTAAAAAGCACTTTGTAAACAGTGTTGCAACACTTTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR TCA 90 bp | GCAAAGTGTTGCAACACTGTTTACAAAGTGCTTTTTACTGAACCAGTTTGGTTTTTAGAGAATGTTGAGTaGACACTAAAGGTCTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: AKCCNTVYKVLFTEPVWFLENVE*TLKVFP Trigger: TGGAAAGACCTTTAGTGTTCACTCAACATTCTCTAA...AAACCAAACTGGTTCAGTAAAAAGCACTTTGTAAACAGTGTTGCAACACTTTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR TCA 90 bp | CAGTGTTCCTTCCAAAGTCATTTTGCATGTATAACATCTGGTTATAAATCACTCCCAGTGTGGATTCTTTaGTGTTTATGCAGATATGTA | + |
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Preference number: 4 (lower is better) Translates to: QCSFQSHFACITSGYKSLPVWIL*CLCRYV Trigger: TACATATCTGCATAAACATCAAAGAATCCACACTGG...GAGTGATTTATAACCAGATGTTATACATGCAAAATGACTTTGGAAGGAACACTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR CAA 90 bp | TCTCCAATCTCTCAAGATTTACATGATGAGCAAAGTGTTGCAACACTGTTTACAAATGACAGAGGGTCCTaGGTCATTTCTTTGGCGTTG | + |
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Preference number: 5 (lower is better) Translates to: SPISQDLHDEQSVATLFTNDRGS*VISLAL Trigger: CAACGCCAAAGAAATGACCAAGGACCCTCTGTCATT...TGTAAACAGTGTTGCAACACTTTGCTCATCATGTAAATCTTGAGAGATTGGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109743.5 |
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| CDS-3UTR CAA 90 bp | GAGCAAAGTGTTGCAACACTGTTTACAAAGTGCTTTTTACTGAACCAGTTTGGTTACATTTATGGGCTTTaGATCCTAGATGGATGGCCA | + |
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Preference number: 5 (lower is better) Translates to: EQSVATLFTKCFLLNQFGYIYGL*ILDGWP Trigger: TGGCCATCCATCTAGGATCAAAAGCCCATAAATGTA...ACCAAACTGGTTCAGTAAAAAGCACTTTGTAAACAGTGTTGCAACACTTTGCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR CAA 90 bp | ACGGCCATCTTCTTCACTATTACAAGATCTCTCCAGTATGTAATGGTGGATGTTTTCCCTATGAATTTGTaGGTGTTGGTGAAGGTTAGA | + |
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Preference number: 5 (lower is better) Translates to: TAIFFTITRSLQYVMVDVFPMNL*VLVKVR Trigger: TCTAACCTTCACCAACACCAACAAATTCATAGGGAA...AACATCCACCATTACATACTGGAGAGATCTTGTAATAGTGAAGAAGATGGCCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR CAA 90 bp | GAGCAAAGTGTTGCAACACTGTTTACAAAGTGCTTTTTACTGAACCAGTTTGGTCTCTTCCCTATGAATTaGTTGGTGTTGGTGAAGGTT | + |
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Preference number: 5 (lower is better) Translates to: EQSVATLFTKCFLLNQFGLFPMN*LVLVKV Trigger: AACCTTCACCAACACCAACAAATTCATAGGGAAGAG...ACCAAACTGGTTCAGTAAAAAGCACTTTGTAAACAGTGTTGCAACACTTTGCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR CAA 90 bp | ATCTCTCAAGATTTACATGATGAGCAAAGTGTTGCAACACTGTTTACAAAGTGCTACATTTATGGGCTTTaGATCCTAGATGGATGGCCA | + |
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Preference number: 5 (lower is better) Translates to: ISQDLHDEQSVATLFTKCYIYGL*ILDGWP Trigger: TGGCCATCCATCTAGGATCAAAAGCCCATAAATGTA...GCACTTTGTAAACAGTGTTGCAACACTTTGCTCATCATGTAAATCTTGAGAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR CAA 90 bp | GAGCAAAGTGTTGCAACACTGTTTACAAAGTGCTTTTTACTGAACCAGTTTGGTTTCCCTATGAATTTGTaGGTGTTGGTGAAGGTTAGA | + |
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Preference number: 5 (lower is better) Translates to: EQSVATLFTKCFLLNQFGFPMNL*VLVKVR Trigger: TCTAACCTTCACCAACACCAACAAATTCATAGGGAA...ACCAAACTGGTTCAGTAAAAAGCACTTTGTAAACAGTGTTGCAACACTTTGCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR CAA 90 bp | ATCTCTCAAGATTTACATGATGAGCAAAGTGTTGCAACACTGTTTACAAAGTGCCTCTTCCCTATGAATTaGTTGGTGTTGGTGAAGGTT | + |
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Preference number: 5 (lower is better) Translates to: ISQDLHDEQSVATLFTKCLFPMN*LVLVKV Trigger: AACCTTCACCAACACCAACAAATTCATAGGGAAGAG...GCACTTTGTAAACAGTGTTGCAACACTTTGCTCATCATGTAAATCTTGAGAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR CAA 90 bp | TTCTTAGTGAGTTCAGAGTTCTGTATTAATTCTTTAGGAATTCAGAGCAGCACTTACATTTATGGGCTTTaGATCCTAGATGGATGGCCA | + |
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Preference number: 5 (lower is better) Translates to: FLVSSEFCINSLGIQSSTYIYGL*ILDGWP Trigger: TGGCCATCCATCTAGGATCAAAAGCCCATAAATGTA...AGTGCTGCTCTGAATTCCTAAAGAATTAATACAGAACTCTGAACTCACTAAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR CAA 90 bp | TTCTTAGTGAGTTCAGAGTTCTGTATTAATTCTTTAGGAATTCAGAGCAGCACTCTCTTCCCTATGAATTaGTTGGTGTTGGTGAAGGTT | + |
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Preference number: 5 (lower is better) Translates to: FLVSSEFCINSLGIQSSTLFPMN*LVLVKV Trigger: AACCTTCACCAACACCAACAAATTCATAGGGAAGAG...AGTGCTGCTCTGAATTCCTAAAGAATTAATACAGAACTCTGAACTCACTAAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR CAA 90 bp | CAGTGTTCCTTCCAAAGTCATTTTGCATGTATAACATCTGGTTATAAATCACTCTTCCCTATGAATTTGTaGGTGTTGGTGAAGGTTAGA | + |
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Preference number: 5 (lower is better) Translates to: QCSFQSHFACITSGYKSLFPMNL*VLVKVR Trigger: TCTAACCTTCACCAACACCAACAAATTCATAGGGAA...GAGTGATTTATAACCAGATGTTATACATGCAAAATGACTTTGGAAGGAACACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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| CDS-3UTR CAA 90 bp | CAGTGTTCCTTCCAAAGTCATTTTGCATGTATAACATCTGGTTATAAATCACTCATGAATTTGTTGGTGTaGGTGAAGGTTAGAAGAACA | + |
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Preference number: 5 (lower is better) Translates to: QCSFQSHFACITSGYKSLMNLLV*VKVRRT Trigger: TGTTCTTCTAACCTTCACCAACACCAACAAATTCAT...GAGTGATTTATAACCAGATGTTATACATGCAAAATGACTTTGGAAGGAACACTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000109742.11 ENSMUST00000109743.5 ENSMUST00000190566.3 |
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