Pregenerated sensors for ZFP703 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000085795Ensembl transcript IDs: ENSMUST00000127097.9, ENSMUST00000154256.3, ENSMUST00000209610.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGTCCCTGAGGGGCCAGGAAGGTAGAAGTCTTGGCAGGCTCAGTTaGAGGCCATTGGGTCACTGCTGGTGGCACAGGGACTTCCCGAAC | + |
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Preference number: 1 (lower is better) Translates to: GSLRGQEGRSLGRLS*RPLGHCWWHRDFPN Trigger: GTTCGGGAAGTCCCTGTGCCACCAGCAGTGACCCAATGGCCTCCAACTGAGCCTGCCAAGACTTCTACCTTCCTGGCCCCTCAGGGACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR CCA 90 bp | GGGGCCAGGAAGGTAGAAGTCTTGGCAGGCTCAGTTGGAGGCCATTaGGTCACTGCTGGTGGCACAGGGACTTCCCGAACTGAGCACCCT | + |
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Preference number: 1 (lower is better) Translates to: GARKVEVLAGSVGGH*VTAGGTGTSRTEHP Trigger: AGGGTGCTCAGTTCGGGAAGTCCCTGTGCCACCAGCAGTGACCCAATGGCCTCCAACTGAGCCTGCCAAGACTTCTACCTTCCTGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR TCA 90 bp | AAAGGACTCTTCTTGGCGTCCAGCTTGTGGGTTAGTCCCCGAGTGTaGCATGGGCGCTGGCGCGCAGGAGAAATGGCTCAACCACAGCCC | + |
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Preference number: 1 (lower is better) Translates to: KGLFLASSLWVSPRV*HGRWRAGEMAQPQP Trigger: GGGCTGTGGTTGAGCCATTTCTCCTGCGCGCCAGCGCCCATGTCACACTCGGGGACTAACCCACAAGCTGGACGCCAAGAAGAGTCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209610.2 |
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| 3UTR TCA 90 bp | GGCACAGGGACTTCCCGAACTGAGCACCCTGGAGGGTCAAGGCTGTaGTTTGATTTGGGGGCTCAGGGCCTAGAACCAAGTGCTCATGTG | + |
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Preference number: 1 (lower is better) Translates to: GTGTSRTEHPGGSRL*FDLGAQGLEPSAHV Trigger: CACATGAGCACTTGGTTCTAGGCCCTGAGCCCCCAAATCAAATCACAGCCTTGACCCTCCAGGGTGCTCAGTTCGGGAAGTCCCTGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR CCA 90 bp | TCCCTGAGTCCCCAGCCTGCCCCCAACAGAGCTCCTAAAGTTGTCTaGTCTGCTGACTTGAGGACTGGTAAGCTTTGGAGGGATCCATCA | + |
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Preference number: 1 (lower is better) Translates to: SLSPQPAPNRAPKVV*SADLRTGKLWRDPS Trigger: TGATGGATCCCTCCAAAGCTTACCAGTCCTCAAGTCAGCAGACCAGACAACTTTAGGAGCTCTGTTGGGGGCAGGCTGGGGACTCAGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR CCA 90 bp | ATAAAGAGCAATTTCGTGCCAGCGGGGCCTTCTAAGACATTTAATTaGATGTGTCAGGTCCCTGTCAGCCGGCAATTTGACTGCACCGCA | + |
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Preference number: 1 (lower is better) Translates to: IKSNFVPAGPSKTFN*MCQVPVSRQFDCTA Trigger: TGCGGTGCAGTCAAATTGCCGGCTGACAGGGACCTGACACATCCAATTAAATGTCTTAGAAGGCCCCGCTGGCACGAAATTGCTCTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR GCA 90 bp | GTTACCTGGGTGGTTAATATTATTATTTGGGGGAGACAGACTTTTTaGATACCACTGACTCATGTGGTCATTAATGCACTTATGTTCCCA | + |
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Preference number: 1 (lower is better) Translates to: VTWVVNIIIWGRQTF*IPLTHVVINALMFP Trigger: TGGGAACATAAGTGCATTAATGACCACATGAGTCAGTGGTATGCAAAAAGTCTGTCTCCCCCAAATAATAATATTAACCACCCAGGTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR TCA 90 bp | TGGTTAATATTATTATTTGGGGGAGACAGACTTTTTGCATACCACTaGCTCATGTGGTCATTAATGCACTTATGTTCCCAGCTTGTAAGC | + |
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Preference number: 1 (lower is better) Translates to: WLILLFGGDRLFAYH*LMWSLMHLCSQLVS Trigger: GCTTACAAGCTGGGAACATAAGTGCATTAATGACCACATGAGTCAGTGGTATGCAAAAAGTCTGTCTCCCCCAAATAATAATATTAACCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR CAA 90 bp | GCGCCGGGGGCGGAGCGGCTCGGGTCTTTCTCGGATCCCAGCCCGTaGGCCGCCGCCGCCGCTACGGAGTTGAGCTTGGATGAGGGCGGC | + |
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Preference number: 2 (lower is better) Translates to: APGAERLGSFSDPSP*AAAAATELSLDEGG Trigger: GCCGCCCTCATCCAAGCTCAACTCCGTAGCGGCGGCGGCGGCCAACGGGCTGGGATCCGAGAAAGACCCGAGCCGCTCCGCCCCCGGCGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127097.9 |
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| 3UTR-3UTR GCA 90 bp | GCGGAGCGGCTCGGGTCTTTCTCGGATCCCAGCCCGTTGGCCGCCGCCGCCGCTTCGGGCTTGCCGATCTaGGAGCAGGTCTGGGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: AERLGSFSDPSPLAAAAASGLPI*EQVWAS Trigger: GCTAGCCCAGACCTGCTCGCAGATCGGCAAGCCCGA...AGCGGCGGCGGCGGCCAACGGGCTGGGATCCGAGAAAGACCCGAGCCGCTCCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127097.9 |
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| 3UTR-3UTR TCA 90 bp | GGTCTGGGACATGGCGAAGGGAGTGCTCTGATCCTAGGGCTCCCTGAGTCCCCAGAAGGCAGTGGGACGTaGGAGGAAGGGGTGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: GLGHGEGSALILGLPESPEGSGT*EEGVGG Trigger: CCCACCCACCCCTTCCTCTCACGTCCCACTGCCTTC...TGGGGACTCAGGGAGCCCTAGGATCAGAGCACTCCCTTCGCCATGTCCCAGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR-3UTR GCA 90 bp | GTGACATGGGCGCTGGCGCGCAGGAGAAATGGCTCAACCACAGCCCTCCCGGTTTCGGGCTTGCCGATCTaGGAGCAGGTCTGGGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: VTWALARRRNGSTTALPVSGLPI*EQVWAS Trigger: GCTAGCCCAGACCTGCTCGCAGATCGGCAAGCCCGA...AACCGGGAGGGCTGTGGTTGAGCCATTTCTCCTGCGCGCCAGCGCCCATGTCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209610.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGCAAGGGAGAGCTCTGTTCACCCCACAAGAGGCCCCGCAGCCGAGGCCGGCCCATTGGGTCACTGCTaGTGGCACAGGGACTTCCCG | + |
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Preference number: 2 (lower is better) Translates to: LARESSVHPTRGPAAEAGPLGHC*WHRDFP Trigger: CGGGAAGTCCCTGTGCCACCAGCAGTGACCCAATGG...GCCGGCCTCGGCTGCGGGGCCTCTTGTGGGGTGAACAGAGCTCTCCCTTGCTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR-3UTR TCA 90 bp | GGTCTGGGACATGGCGAAGGGAGTGCTCTGATCCTAGGGCTCCCTGAGTCCCCAAGGGACTTCCCGAACTaGGCACCCTGGAGGGTCAAG | + |
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Preference number: 2 (lower is better) Translates to: GLGHGEGSALILGLPESPRDFPN*APWRVK Trigger: CTTGACCCTCCAGGGTGCTCAGTTCGGGAAGTCCCT...TGGGGACTCAGGGAGCCCTAGGATCAGAGCACTCCCTTCGCCATGTCCCAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR-3UTR CCA 90 bp | GTCTTTCTCGGATCCCAGCCCGTTGGCCGCCGCCGCCGCTACGGAGTTGAGCTTATCTGCGAGCAGGTCTaGGCTAGCAGAGCCAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: VFLGSQPVGRRRRYGVELICEQV*ASRAKG Trigger: TCCTTTGGCTCTGCTAGCCCAGACCTGCTCGCAGAT...AAGCTCAACTCCGTAGCGGCGGCGGCGGCCAACGGGCTGGGATCCGAGAAAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127097.9 |
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| 3UTR-3UTR CCA 90 bp | TCACTGCTGGTGGCACAGGGACTTCCCGAACTGAGCACCCTGGAGGGTCAAGGCAAATACACAGTCCGGTaGGGGAGGGGCTGGGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: SLLVAQGLPELSTLEGQGKYTVR*GRGWAG Trigger: TCCAGCCCAGCCCCTCCCCCACCGGACTGTGTATTT...GCCTTGACCCTCCAGGGTGCTCAGTTCGGGAAGTCCCTGTGCCACCAGCAGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGCTCTGTTCACCCCACAAGAGGCCCCGCAGCCGAGGCCGGCCCGAAGCCGCTCCTAAAGTTGTCTaGTCTGCTGACTTGAGGACT | + |
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Preference number: 2 (lower is better) Translates to: GELCSPHKRPRSRGRPEAAPKVV*SADLRT Trigger: AGTCCTCAAGTCAGCAGACCAGACAACTTTAGGAGC...GGCTTCGGGCCGGCCTCGGCTGCGGGGCCTCTTGTGGGGTGAACAGAGCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR-3UTR CCA 90 bp | CCCGAGTGTGACATGGGCGCTGGCGCGCAGGAGAAATGGCTCAACCACAGCCCTATCTGCGAGCAGGTCTaGGCTAGCAGAGCCAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: PECDMGAGAQEKWLNHSPICEQV*ASRAKG Trigger: TCCTTTGGCTCTGCTAGCCCAGACCTGCTCGCAGAT...AGGGCTGTGGTTGAGCCATTTCTCCTGCGCGCCAGCGCCCATGTCACACTCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209610.2 |
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| 3UTR-3UTR TCA 90 bp | GTCAGCCGGCAATTTGACTGCACCGCAAGGTGTGGGTCCCTGAGGGGCCAGGAAGGAGGGTCAAGGCTGTaGTTTGATTTGGGGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: VSRQFDCTARCGSLRGQEGGSRL*FDLGAQ Trigger: CTGAGCCCCCAAATCAAATCACAGCCTTGACCCTCC...TTCCTGGCCCCTCAGGGACCCACACCTTGCGGTGCAGTCAAATTGCCGGCTGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR-3UTR CCA 90 bp | TCACTGCTGGTGGCACAGGGACTTCCCGAACTGAGCACCCTGGAGGGTCAAGGCAAGAAGGGAGAGGGGTaGGGGGAATCATGGAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: SLLVAQGLPELSTLEGQGKKGEG*GESWSY Trigger: GTAACTCCATGATTCCCCCCACCCCTCTCCCTTCTT...GCCTTGACCCTCCAGGGTGCTCAGTTCGGGAAGTCCCTGTGCCACCAGCAGTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR-3UTR CCA 90 bp | CGGAAACCTAATGCCAGCTTTGGCGATTGCTGGCTCAGGTCTGGGACATGGCGATTGGGTCACTGCTGGTaGCACAGGGACTTCCCGAAC | + |
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Preference number: 2 (lower is better) Translates to: RKPNASFGDCWLRSGTWRLGHCW*HRDFPN Trigger: GTTCGGGAAGTCCCTGTGCCACCAGCAGTGACCCAA...TCGCCATGTCCCAGACCTGAGCCAGCAATCGCCAAAGCTGGCATTAGGTTTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR-3UTR TCA 90 bp | TTAGCAAGGGAGAGCTCTGTTCACCCCACAAGAGGCCCCGCAGCCGAGGCCGGCCTTTTTGCATACCACTaGCTCATGTGGTCATTAATG | + |
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Preference number: 2 (lower is better) Translates to: LARESSVHPTRGPAAEAGLFAYH*LMWSLM Trigger: CATTAATGACCACATGAGTCAGTGGTATGCAAAAAG...GCCGGCCTCGGCTGCGGGGCCTCTTGTGGGGTGAACAGAGCTCTCCCTTGCTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR-3UTR TCA 90 bp | TCACTGCTGGTGGCACAGGGACTTCCCGAACTGAGCACCCTGGAGGGTCAAGGCAAACTTCACATGGAATaGAACAAGATGGGGTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: SLLVAQGLPELSTLEGQGKLHME*NKMGWE Trigger: TTCCCACCCCATCTTGTTTCATTCCATGTGAAGTTT...GCCTTGACCCTCCAGGGTGCTCAGTTCGGGAAGTCCCTGTGCCACCAGCAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR-3UTR GCA 90 bp | CGGAAACCTAATGCCAGCTTTGGCGATTGCTGGCTCAGGTCTGGGACATGGCGAGGGAGACAGACTTTTTaGATACCACTGACTCATGTG | + |
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Preference number: 2 (lower is better) Translates to: RKPNASFGDCWLRSGTWRGRQTF*IPLTHV Trigger: CACATGAGTCAGTGGTATGCAAAAAGTCTGTCTCCC...TCGCCATGTCCCAGACCTGAGCCAGCAATCGCCAAAGCTGGCATTAGGTTTCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR-3UTR CCA 90 bp | GGTCTGGGACATGGCGAAGGGAGTGCTCTGATCCTAGGGCTCCCTGAGTCCCCAATGGAGTTACCTGGGTaGTTAATATTATTATTTGGG | + |
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Preference number: 2 (lower is better) Translates to: GLGHGEGSALILGLPESPMELPG*LILLFG Trigger: CCCAAATAATAATATTAACCACCCAGGTAACTCCAT...TGGGGACTCAGGGAGCCCTAGGATCAGAGCACTCCCTTCGCCATGTCCCAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR-3UTR CAA 90 bp | GGAGAGCTCTGTTCACCCCACAAGAGGCCCCGCAGCCGAGGCCGGCCCGAAGCCCTCAGTTGGAGGCCATaGGGTCACTGCTGGTGGCAC | + |
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Preference number: 3 (lower is better) Translates to: GELCSPHKRPRSRGRPEALSWRP*GHCWWH Trigger: GTGCCACCAGCAGTGACCCAATGGCCTCCAACTGAG...GGCTTCGGGCCGGCCTCGGCTGCGGGGCCTCTTGTGGGGTGAACAGAGCTCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR TCA 72 bp | GCCGGCAATTTGACTGCACCGCAAGGTGTGGGTCCCTaGGGGGCCAGGAAGGTAGAAGTCTTGGCAGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: AGNLTAPQGVGP*GARKVEVLAGS Trigger: TGAGCCTGCCAAGACTTCTACCTTCCTGGCCCCTCAGGGACCCACACCTTGCGGTGCAGTCAAATTGCCGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR TCA 72 bp | TTCTTGGCGTCCAGCTTGTGGGTTAGTCCCCGAGTGTaGCATGGGCGCTGGCGCGCAGGAGAAATGGCTCAA | + |
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Preference number: 3 (lower is better) Translates to: FLASSLWVSPRV*HGRWRAGEMAQ Trigger: TTGAGCCATTTCTCCTGCGCGCCAGCGCCCATGTCACACTCGGGGACTAACCCACAAGCTGGACGCCAAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209610.2 |
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| 3UTR CCA 72 bp | AGCAGGTCTGGGCTAGCAGAGCCAAAGGACTCTTCTTaGCGTCCAGCTTGTGGGTTAGTCCCCGAGTGTGAC | + |
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Preference number: 3 (lower is better) Translates to: SRSGLAEPKDSS*RPACGLVPECD Trigger: GTCACACTCGGGGACTAACCCACAAGCTGGACGCCAAGAAGAGTCCTTTGGCTCTGCTAGCCCAGACCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209610.2 |
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| 3UTR-3UTR CAA 90 bp | GGGTCACTGCTGGTGGCACAGGGACTTCCCGAACTGAGCACCCTGGAGGGTCAAGGGGAGACAGACTTTTaGCATACCACTGACTCATGT | + |
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Preference number: 3 (lower is better) Translates to: GSLLVAQGLPELSTLEGQGETDF*HTTDSC Trigger: ACATGAGTCAGTGGTATGCAAAAAGTCTGTCTCCCC...TTGACCCTCCAGGGTGCTCAGTTCGGGAAGTCCCTGTGCCACCAGCAGTGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR CCA 72 bp | AAGGTAGAAGTCTTGGCAGGCTCAGTTGGAGGCCATTaGGTCACTGCTGGTGGCACAGGGACTTCCCGAACT | + |
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Preference number: 3 (lower is better) Translates to: KVEVLAGSVGGH*VTAGGTGTSRT Trigger: AGTTCGGGAAGTCCCTGTGCCACCAGCAGTGACCCAATGGCCTCCAACTGAGCCTGCCAAGACTTCTACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR TCA 72 bp | ACTTCCCGAACTGAGCACCCTGGAGGGTCAAGGCTGTaGTTTGATTTGGGGGCTCAGGGCCTAGAACCAAGT | + |
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Preference number: 3 (lower is better) Translates to: TSRTEHPGGSRL*FDLGAQGLEPS Trigger: ACTTGGTTCTAGGCCCTGAGCCCCCAAATCAAATCACAGCCTTGACCCTCCAGGGTGCTCAGTTCGGGAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR CCA 72 bp | AATTTCGTGCCAGCGGGGCCTTCTAAGACATTTAATTaGATGTGTCAGGTCCCTGTCAGCCGGCAATTTGAC | + |
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Preference number: 3 (lower is better) Translates to: NFVPAGPSKTFN*MCQVPVSRQFD Trigger: GTCAAATTGCCGGCTGACAGGGACCTGACACATCCAATTAAATGTCTTAGAAGGCCCCGCTGGCACGAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR TCA 72 bp | AGACTCATGCAAGAGACTTCCCAAGATGGGGGAAACTaGAAGTGTAGGACCCCAACTCTTCCTTCATTCCTT | + |
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Preference number: 3 (lower is better) Translates to: RLMQETSQDGGN*KCRTPTLPSFL Trigger: AAGGAATGAAGGAAGAGTTGGGGTCCTACACTTTCAGTTTCCCCCATCTTGGGAAGTCTCTTGCATGAGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR TCA 72 bp | TTATTATTTGGGGGAGACAGACTTTTTGCATACCACTaGCTCATGTGGTCATTAATGCACTTATGTTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: LLFGGDRLFAYH*LMWSLMHLCSQ Trigger: CTGGGAACATAAGTGCATTAATGACCACATGAGTCAGTGGTATGCAAAAAGTCTGTCTCCCCCAAATAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR GCA 90 bp | CGGAGCGGCTCGGGTCTTTCTCGGATCCCAGCCCGTTGGCCGCCGCCGCCGCTATGCTGCCGCCGCCGCTaGCGCTGCTTTCGGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: RSGSGLSRIPARWPPPPLCCRRR*RCFRVS Trigger: GGACACCCGAAAGCAGCGGCAGCGGCGGCGGCAGCA...TAGCGGCGGCGGCGGCCAACGGGCTGGGATCCGAGAAAGACCCGAGCCGCTCCG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127097.9 |
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| CDS-3UTR CCA 90 bp | GGAGAGCTCTGTTCACCCCACAAGAGGCCCCGCAGCCGAGGCCGGCCCGAAGCCTGCGCCCCGATGCGGTaGCTTCCGGGCCACCGTGAG | + |
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Preference number: 4 (lower is better) Translates to: GELCSPHKRPRSRGRPEACAPMR*LPGHRE Trigger: CTCACGGTGGCCCGGAAGCCACCGCATCGGGGCGCA...GGCTTCGGGCCGGCCTCGGCTGCGGGGCCTCTTGTGGGGTGAACAGAGCTCTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR GCA 90 bp | GCGGAGCGGCTCGGGTCTTTCTCGGATCCCAGCCCGTTGGCCGCCGCCGCCGCTGTGGAGGACAGCGGTTaGAGGTACTCCGGGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: AERLGSFSDPSPLAAAAAVEDSG*RYSGCR Trigger: CCTGCACCCGGAGTACCTGCAACCGCTGTCCTCCAC...AGCGGCGGCGGCGGCCAACGGGCTGGGATCCGAGAAAGACCCGAGCCGCTCCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127097.9 |
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| CDS-3UTR TCA 90 bp | CGGAGCGGCTCGGGTCTTTCTCGGATCCCAGCCCGTTGGCCGCCGCCGCCGCTACCATCTCAATTGGGCTaGCGGGTGTGGAGGACAGCG | + |
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Preference number: 4 (lower is better) Translates to: RSGSGLSRIPARWPPPPLPSQLG*RVWRTA Trigger: CGCTGTCCTCCACACCCGTCAGCCCAATTGAGATGG...TAGCGGCGGCGGCGGCCAACGGGCTGGGATCCGAGAAAGACCCGAGCCGCTCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127097.9 |
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| CDS-3UTR GCA 90 bp | TTAGCAAGGGAGAGCTCTGTTCACCCCACAAGAGGCCCCGCAGCCGAGGCCGGCTGCTGCCGCCGCCGCTaGCGCTGCTTTCGGGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: LARESSVHPTRGPAAEAGCCRRR*RCFRVS Trigger: GGACACCCGAAAGCAGCGGCAGCGGCGGCGGCAGCA...GCCGGCCTCGGCTGCGGGGCCTCTTGTGGGGTGAACAGAGCTCTCCCTTGCTAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR CCA 90 bp | GAGGGGCTGGGCTGGATCCTGGTAGGGGTAAGCGGTAGTGGAGCTTGCAGCGTCCGGCCTGGGCGGCGCTaGAGGAGAGCGCCGCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: EGLGWILVGVSGSGACSVRPGRR*RRAPQV Trigger: AACCTGCGGCGCTCTCCTCCAGCGCCGCCCAGGCCG...GACGCTGCAAGCTCCACTACCGCTTACCCCTACCAGGATCCAGCCCAGCCCCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR CAA 72 bp | GCGGAGCGGCTCGGGTCTTTCTCGGATCCCAGCCCGTaGGCCGCCGCCGCCGCTACGGAGTTGAGCTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: AERLGSFSDPSP*AAAAATELSLD Trigger: ATCCAAGCTCAACTCCGTAGCGGCGGCGGCGGCCAACGGGCTGGGATCCGAGAAAGACCCGAGCCGCTCCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127097.9 |
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| CDS-3UTR GCA 90 bp | GGAGAGCTCTGTTCACCCCACAAGAGGCCCCGCAGCCGAGGCCGGCCCGAAGCCTCACGGCATAATCCCTaGAGGAAGGAGGGTGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: GELCSPHKRPRSRGRPEASRHNP*RKEGGE Trigger: CTCCCCACCCTCCTTCCTGCAGGGATTATGCCGTGA...GGCTTCGGGCCGGCCTCGGCTGCGGGGCCTCTTGTGGGGTGAACAGAGCTCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR CCA 90 bp | TGTGTCAGGTCCCTGTCAGCCGGCAATTTGACTGCACCGCAAGGTGTGGGTCCCGACACTGGAGCCACGTaGCCCGCCCCCACCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: CVRSLSAGNLTAPQGVGPDTGAT*PAPTRA Trigger: CGCCCTGGTGGGGGCGGGCCACGTGGCTCCAGTGTC...GGGACCCACACCTTGCGGTGCAGTCAAATTGCCGGCTGACAGGGACCTGACACA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR GCA 90 bp | TTAGCAAGGGAGAGCTCTGTTCACCCCACAAGAGGCCCCGCAGCCGAGGCCGGCTCGGGCTTGCCGATCTaGGAGCAGGTCTGGGCTAGC | + |
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Preference number: 4 (lower is better) Translates to: LARESSVHPTRGPAAEAGSGLPI*EQVWAS Trigger: GCTAGCCCAGACCTGCTCGCAGATCGGCAAGCCCGA...GCCGGCCTCGGCTGCGGGGCCTCTTGTGGGGTGAACAGAGCTCTCCCTTGCTAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR GCA 90 bp | GGGTCACTGCTGGTGGCACAGGGACTTCCCGAACTGAGCACCCTGGAGGGTCAATGCGGCTGCAGCGGCTaGAGCGGCACTGCCCAAGCT | + |
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Preference number: 4 (lower is better) Translates to: GSLLVAQGLPELSTLEGQCGCSG*SGTAQA Trigger: AGCTTGGGCAGTGCCGCTGCAGCCGCTGCAGCCGCA...TTGACCCTCCAGGGTGCTCAGTTCGGGAAGTCCCTGTGCCACCAGCAGTGACCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR TCA 90 bp | GTCAGCCGGCAATTTGACTGCACCGCAAGGTGTGGGTCCCTGAGGGGCCAGGAAGCAAGTGGAACAGCTTaGGCCGCCGAGGTGCGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSRQFDCTARCGSLRGQEASGTA*AAEVRG Trigger: GCCTCGCACCTCGGCGGCTCAAGCTGTTCCACTTGC...TTCCTGGCCCCTCAGGGACCCACACCTTGCGGTGCAGTCAAATTGCCGGCTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR GCA 90 bp | TCACTGCTGGTGGCACAGGGACTTCCCGAACTGAGCACCCTGGAGGGTCAAGGCGCAGGTTGCAAGGGGTaGCCCGGGTACACCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLVAQGLPELSTLEGQGAGCKG*PGYTRG Trigger: CCCTCTGGTGTACCCGGGGCACCCCTTGCAACCTGC...GCCTTGACCCTCCAGGGTGCTCAGTTCGGGAAGTCCCTGTGCCACCAGCAGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
||
| CDS-3UTR GCA 90 bp | GGGTCACTGCTGGTGGCACAGGGACTTCCCGAACTGAGCACCCTGGAGGGTCAAACAAGAGGCTGCGGCTaGAGCGGCTGCAGCGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GSLLVAQGLPELSTLEGQTRGCG*SGCSGT Trigger: AGTGCCGCTGCAGCCGCTGCAGCCGCAGCCTCTTGT...TTGACCCTCCAGGGTGCTCAGTTCGGGAAGTCCCTGTGCCACCAGCAGTGACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
||
| CDS-3UTR GCA 90 bp | GGGTCACTGCTGGTGGCACAGGGACTTCCCGAACTGAGCACCCTGGAGGGTCAAGGGAAGGGACGGCACTaGCAGGCCCCCAGCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSLLVAQGLPELSTLEGQGKGRH*QAPSCR Trigger: TCTACAGCTGGGGGCCTGGCAGTGCCGTCCCTTCCC...TTGACCCTCCAGGGTGCTCAGTTCGGGAAGTCCCTGTGCCACCAGCAGTGACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR TCA 90 bp | GGTCTGGGACATGGCGAAGGGAGTGCTCTGATCCTAGGGCTCCCTGAGTCCCCAGCCTGGTTTGTAGGGTaGCACTGGAGCCACGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLGHGEGSALILGLPESPAWFVG*HWSHVA Trigger: GGCCACGTGGCTCCAGTGTCACCCTACAAACCAGGC...TGGGGACTCAGGGAGCCCTAGGATCAGAGCACTCCCTTCGCCATGTCCCAGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR GCA 90 bp | CTAGCAGAGCCAAAGGACTCTTCTTGGCGTCCAGCTTGTGGGTTAGTCCCCGAGTGCTGCCGCCGCCGCTaGCGCTGCTTTCGGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LAEPKDSSWRPACGLVPECCRRR*RCFRVS Trigger: GGACACCCGAAAGCAGCGGCAGCGGCGGCGGCAGCA...CTCGGGGACTAACCCACAAGCTGGACGCCAAGAAGAGTCCTTTGGCTCTGCTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209610.2 |
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| CDS-3UTR GCA 90 bp | TGTGTCAGGTCCCTGTCAGCCGGCAATTTGACTGCACCGCAAGGTGTGGGTCCCCAGGTGACAAGAGGCTaGGGCTGCAGCGGCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CVRSLSAGNLTAPQGVGPQVTRG*GCSGCS Trigger: GCTGCAGCCGCTGCAGCCGCAGCCTCTTGTCACCTG...GGGACCCACACCTTGCGGTGCAGTCAAATTGCCGGCTGACAGGGACCTGACACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
||
| CDS-3UTR CCA 90 bp | TCTTTCTCGGATCCCAGCCCGTTGGCCGCCGCCGCCGCTACGGAGTTGAGCTTGGCTTTCGGGTGTCCTTaGGTTAGATCCAGCGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SFSDPSPLAAAAATELSLAFGCP*VRSSGR Trigger: TCGCCCGCTGGATCTAACCCAAGGACACCCGAAAGC...CAAGCTCAACTCCGTAGCGGCGGCGGCGGCCAACGGGCTGGGATCCGAGAAAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127097.9 |
||
| CDS-3UTR CCA 90 bp | GTCAGCCGGCAATTTGACTGCACCGCAAGGTGTGGGTCCCTGAGGGGCCAGGAACGTAGGCGCCCACGATaGAGCCGTGGTAACCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: VSRQFDCTARCGSLRGQERRRPR*SRGNRC Trigger: GCATCGGTTACCACGGCTCCATCGTGGGCGCCTACG...TTCCTGGCCCCTCAGGGACCCACACCTTGCGGTGCAGTCAAATTGCCGGCTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
||
| CDS-3UTR CCA 90 bp | TCACTGCTGGTGGCACAGGGACTTCCCGAACTGAGCACCCTGGAGGGTCAAGGCAGTAGGGTCCGGCTGTaGGAAGGGACGGCACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLLVAQGLPELSTLEGQGSRVRL*EGTALP Trigger: TGGCAGTGCCGTCCCTTCCCACAGCCGGACCCTACT...GCCTTGACCCTCCAGGGTGCTCAGTTCGGGAAGTCCCTGTGCCACCAGCAGTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
||
| CDS-3UTR CCA 90 bp | GGGTCACTGCTGGTGGCACAGGGACTTCCCGAACTGAGCACCCTGGAGGGTCAACGGCTGGCTCGGGACTaGGTTTGGCTTCCTGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSLLVAQGLPELSTLEGQRLARD*VWLPAL Trigger: AAGAGCAGGAAGCCAAACCCAGTCCCGAGCCAGCCG...TTGACCCTCCAGGGTGCTCAGTTCGGGAAGTCCCTGTGCCACCAGCAGTGACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR GCA 90 bp | TCTTGGCAGGCTCAGTTGGAGGCCATTGGGTCACTGCTGGTGGCACAGGGACTTGTGGAGGACAGCGGTTaGAGGTACTCCGGGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SWQAQLEAIGSLLVAQGLVEDSG*RYSGCR Trigger: CCTGCACCCGGAGTACCTGCAACCGCTGTCCTCCAC...AAGTCCCTGTGCCACCAGCAGTGACCCAATGGCCTCCAACTGAGCCTGCCAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
||
| CDS-3UTR CCA 90 bp | TCACTGCTGGTGGCACAGGGACTTCCCGAACTGAGCACCCTGGAGGGTCAAGGCGCTTTCGGGTGTCCTTaGGTTAGATCCAGCGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SLLVAQGLPELSTLEGQGAFGCP*VRSSGR Trigger: TCGCCCGCTGGATCTAACCCAAGGACACCCGAAAGC...GCCTTGACCCTCCAGGGTGCTCAGTTCGGGAAGTCCCTGTGCCACCAGCAGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
||
| CDS-3UTR CCA 90 bp | GAGGGGCTGGGCTGGATCCTGGTAGGGGTAAGCGGTAGTGGAGCTTGCAGCGTCTTCTTGCAGTCTGAGTaGTGTGGTGAACCTCCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EGLGWILVGVSGSGACSVFLQSE*CGEPPR Trigger: CCGCGGAGGTTCACCACACCACTCAGACTGCAAGAA...GACGCTGCAAGCTCCACTACCGCTTACCCCTACCAGGATCCAGCCCAGCCCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
||
| CDS-3UTR GCA 90 bp | TGTGTCAGGTCCCTGTCAGCCGGCAATTTGACTGCACCGCAAGGTGTGGGTCCCTCGGATCGTGCGCGCTaGAAGTGGAACAGCTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CVRSLSAGNLTAPQGVGPSDRAR*KWNSLS Trigger: GCTCAAGCTGTTCCACTTGCAGCGCGCACGATCCGA...GGGACCCACACCTTGCGGTGCAGTCAAATTGCCGGCTGACAGGGACCTGACACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR CCA 90 bp | CGGAAACCTAATGCCAGCTTTGGCGATTGCTGGCTCAGGTCTGGGACATGGCGACGTGCGCGCTGCAAGTaGAACAGCTTGAGCCGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RKPNASFGDCWLRSGTWRRARCK*NSLSRR Trigger: TCGGCGGCTCAAGCTGTTCCACTTGCAGCGCGCACG...TCGCCATGTCCCAGACCTGAGCCAGCAATCGCCAAAGCTGGCATTAGGTTTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR CCA 90 bp | GGGTCACTGCTGGTGGCACAGGGACTTCCCGAACTGAGCACCCTGGAGGGTCAATCCATACAGTGCGTATaGCGAGTAGTAGGGTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSLLVAQGLPELSTLEGQSIQCV*RVVGSG Trigger: GCCGGACCCTACTACTCGCCATACGCACTGTATGGA...TTGACCCTCCAGGGTGCTCAGTTCGGGAAGTCCCTGTGCCACCAGCAGTGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
||
| CDS-3UTR TCA 90 bp | CGGAAACCTAATGCCAGCTTTGGCGATTGCTGGCTCAGGTCTGGGACATGGCGAGAGTCCGTAGATGGCTaGGCAGCTCCTCAGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RKPNASFGDCWLRSGTWRESVDG*AAPQRW Trigger: CCACCTCTGAGGAGCTGCTCAGCCATCTACGGACTC...TCGCCATGTCCCAGACCTGAGCCAGCAATCGCCAAAGCTGGCATTAGGTTTCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
||
| CDS-3UTR TCA 90 bp | CTAGCAGAGCCAAAGGACTCTTCTTGGCGTCCAGCTTGTGGGTTAGTCCCCGAGAAGCCTCAATTGGGCTaGCGGGTGTGGAGGACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LAEPKDSSWRPACGLVPEKPQLG*RVWRTA Trigger: CGCTGTCCTCCACACCCGTCAGCCCAATTGAGGCTT...CTCGGGGACTAACCCACAAGCTGGACGCCAAGAAGAGTCCTTTGGCTCTGCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209610.2 |
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| CDS-3UTR CCA 90 bp | TGTGTCAGGTCCCTGTCAGCCGGCAATTTGACTGCACCGCAAGGTGTGGGTCCCATCTGCGAGCAGGTCTaGGCTAGCAGAGCCAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CVRSLSAGNLTAPQGVGPICEQV*ASRAKG Trigger: TCCTTTGGCTCTGCTAGCCCAGACCTGCTCGCAGAT...GGGACCCACACCTTGCGGTGCAGTCAAATTGCCGGCTGACAGGGACCTGACACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
||
| CDS-3UTR CCA 90 bp | TCACTGCTGGTGGCACAGGGACTTCCCGAACTGAGCACCCTGGAGGGTCAAGGCGCTCGGGACTGGGTTTaGCTTCCTGCTCTTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLVAQGLPELSTLEGQGARDWV*LPALSC Trigger: ACAAGAAAGAGCAGGAAGCCAAACCCAGTCCCGAGC...GCCTTGACCCTCCAGGGTGCTCAGTTCGGGAAGTCCCTGTGCCACCAGCAGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR GCA 90 bp | GGTCTGGGACATGGCGAAGGGAGTGCTCTGATCCTAGGGCTCCCTGAGTCCCCACTGGGTTTGGCTTCCTaGTCTTTCTTGTCCAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GLGHGEGSALILGLPESPLGLAS*SFLSSS Trigger: CGAACTGGACAAGAAAGAGCAGGAAGCCAAACCCAG...TGGGGACTCAGGGAGCCCTAGGATCAGAGCACTCCCTTCGCCATGTCCCAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR CCA 90 bp | CGCGCAGGAGAAATGGCTCAACCACAGCCCTCCCGGTTAAAGGTGACTTCTCTGGCTTTCGGGTGTCCTTaGGTTAGATCCAGCGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RAGEMAQPQPSRLKVTSLAFGCP*VRSSGR Trigger: TCGCCCGCTGGATCTAACCCAAGGACACCCGAAAGC...CAGAGAAGTCACCTTTAACCGGGAGGGCTGTGGTTGAGCCATTTCTCCTGCGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209610.2 |
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| CDS-3UTR CCA 90 bp | TGTGTCAGGTCCCTGTCAGCCGGCAATTTGACTGCACCGCAAGGTGTGGGTCCCCCAAAGGACTCTTCTTaGCGTCCAGCTCAATTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CVRSLSAGNLTAPQGVGPPKDSS*RPAQLG Trigger: GCCCAATTGAGCTGGACGCCAAGAAGAGTCCTTTGG...GGGACCCACACCTTGCGGTGCAGTCAAATTGCCGGCTGACAGGGACCTGACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR CCA 90 bp | TCTTGGCAGGCTCAGTTGGAGGCCATTGGGTCACTGCTGGTGGCACAGGGACTTCCAATTGCAGCTGTGTaGCAGCGGTTCGTTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SWQAQLEAIGSLLVAQGLPIAAV*QRFVLQ Trigger: CTGCAGAACGAACCGCTGCCACACAGCTGCAATTGG...AAGTCCCTGTGCCACCAGCAGTGACCCAATGGCCTCCAACTGAGCCTGCCAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| 3UTR CAA 72 bp | GAAGGTAGAAGTCTTGGCAGGCTCAGTTGGAGGCCATaGGGTCACTGCTGGTGGCACAGGGACTTCCCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: EGRSLGRLSWRP*GHCWWHRDFPN Trigger: GTTCGGGAAGTCCCTGTGCCACCAGCAGTGACCCAATGGCCTCCAACTGAGCCTGCCAAGACTTCTACCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR TCA 90 bp | GAAAGTGTAGGACCCCAACTCTTCCTTCATTCCTTAACACCAAACCAGTCAAAACGGCGCTGGGGACCCTaGAGCCCGCCTTGTCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ESVGPQLFLHSLTPNQSKRRWGP*SPPCLR Trigger: CCGGAGACAAGGCGGGCTTCAGGGTCCCCAGCGCCG...TTTTGACTGGTTTGGTGTTAAGGAATGAAGGAAGAGTTGGGGTCCTACACTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR GCA 90 bp | CGGAAACCTAATGCCAGCTTTGGCGATTGCTGGCTCAGGTCTGGGACATGGCGATCTCTGTCCATACAGTaGGTATGGCGAGTAGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RKPNASFGDCWLRSGTWRSLSIQ*VWRVVG Trigger: CCCTACTACTCGCCATACGCACTGTATGGACAGAGA...TCGCCATGTCCCAGACCTGAGCCAGCAATCGCCAAAGCTGGCATTAGGTTTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR TCA 90 bp | GAAAGTGTAGGACCCCAACTCTTCCTTCATTCCTTAACACCAAACCAGTCAAAACCCGGCAGGGCTGTGTaGGTCCGTAGATGGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ESVGPQLFLHSLTPNQSKPGRAV*VRRWLS Trigger: GCTCAGCCATCTACGGACTCACACAGCCCTGCCGGG...TTTTGACTGGTTTGGTGTTAAGGAATGAAGGAAGAGTTGGGGTCCTACACTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR GCA 90 bp | GTTTTAACAGTTAAGACTCATGCAAGAGACTTCCCAAGATGGGGGAAACTGAAAAGGAGCCGCTGTCTTTaGGGGAGTCGCCGCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VLTVKTHARDFPRWGKLKRSRCL*GSRRLR Trigger: CCGGAGGCGGCGACTCCCGCAAAGACAGCGGCTCCT...TTTCAGTTTCCCCCATCTTGGGAAGTCTCTTGCATGAGTCTTAACTGTTAAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR GCA 90 bp | GTTTTAACAGTTAAGACTCATGCAAGAGACTTCCCAAGATGGGGGAAACTGAAACGCCGCCGCCGTTCTTaGAGTCTGAGTGGTGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLTVKTHARDFPRWGKLKRRRRS*SLSGVV Trigger: CACCACACCACTCAGACTGCAAGAACGGCGGCGGCG...TTTCAGTTTCCCCCATCTTGGGAAGTCTCTTGCATGAGTCTTAACTGTTAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR CCA 90 bp | GTTTTAACAGTTAAGACTCATGCAAGAGACTTCCCAAGATGGGGGAAACTGAAAAGGACGAAGAGGTGGTaGAGGACACCGACGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLTVKTHARDFPRWGKLKRTKRW*RTPTRS Trigger: GCTCCTCGTCGGTGTCCTCCACCACCTCTTCGTCCT...TTTCAGTTTCCCCCATCTTGGGAAGTCTCTTGCATGAGTCTTAACTGTTAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR TCA 90 bp | GTTTTAACAGTTAAGACTCATGCAAGAGACTTCCCAAGATGGGGGAAACTGAAAGTTCGTTCTGCAGCATaGAGCCATAGGTGTAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLTVKTHARDFPRWGKLKVRSAA*SHRCRE Trigger: CTCTCTACACCTATGGCTTCATGCTGCAGAACGAAC...TTTCAGTTTCCCCCATCTTGGGAAGTCTCTTGCATGAGTCTTAACTGTTAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS GCA 90 bp | GAGCCACGTGGCCCGCCCCCACCAGGGCGGAGGGCGGCTCTGACTTaGGCCCCGATGCGGTGGCTTCCGGGCCACCGTGAGCCGAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EPRGPPPPGRRAALT*APMRWLPGHREPSP Trigger: GGGACTCGGCTCACGGTGGCCCGGAAGCCACCGCATCGGGGCGCAAGTCAGAGCCGCCCTCCGCCCTGGTGGGGGCGGGCCACGTGGCTC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS TCA 90 bp | GGCGGCTCTGACTTGCGCCCCGATGCGGTGGCTTCCGGGCCACCGTaGGCCGAGTCCCCGCCGCTACCTCGGCTCCCAGCGGCTGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: GGSDLRPDAVASGPP*AESPPLPRLPAAGS Trigger: CGAGCCAGCCGCTGGGAGCCGAGGTAGCGGCGGGGACTCGGCTCACGGTGGCCCGGAAGCCACCGCATCGGGGCGCAAGTCAGAGCCGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
||
| CDS TCA 90 bp | CACTGGAGCCACGTGGCCCGCCCCCACCAGGGCGGAGGGCGGCTCTaGCTTGCGCCCCGATGCGGTGGCTTCCGGGCCACCGTGAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: HWSHVARPHQGGGRL*LAPRCGGFRATVSR Trigger: TCGGCTCACGGTGGCCCGGAAGCCACCGCATCGGGGCGCAAGTCAGAGCCGCCCTCCGCCCTGGTGGGGGCGGGCCACGTGGCTCCAGTG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
||
| CDS CCA 90 bp | CCCCGCCGCTACCTCGGCTCCCAGCGGCTGGCTCGGGACTGGGTTTaGCTTCCTGCTCTTTCTTGTCCAGTTCGCCGGCCCCGCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PRRYLGSQRLARDWV*LPALSCPVRRPRRR Trigger: GCGGCGGCGGGGCCGGCGAACTGGACAAGAAAGAGCAGGAAGCCAAACCCAGTCCCGAGCCAGCCGCTGGGAGCCGAGGTAGCGGCGGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
||
| CDS CCA 90 bp | GTGAACCTCCGCGGGAGCCGCCGGGAGAAGACGAGTTTGATGAGGTaGAGACCGATGCCCCGTGCGGGGGAAAGGGAGGGCAGGCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: VNLRGSRREKTSLMR*RPMPRAGEREGRRR Trigger: GCGCCGCCTGCCCTCCCTTTCCCCCGCACGGGGCATCGGTCTCCACCTCATCAAACTCGTCTTCTCCCGGCGGCTCCCGCGGAGGTTCAC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
||
| CDS CCA 90 bp | CCGAGTCCCCGCCGCTACCTCGGCTCCCAGCGGCTGGCTCGGGACTaGGTTTGGCTTCCTGCTCTTTCTTGTCCAGTTCGCCGGCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PSPRRYLGSQRLARD*VWLPALSCPVRRPR Trigger: GCGGGGCCGGCGAACTGGACAAGAAAGAGCAGGAAGCCAAACCCAGTCCCGAGCCAGCCGCTGGGAGCCGAGGTAGCGGCGGGGACTCGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
||
| CDS CCA 90 bp | CATAGGTGTAGAGAGGATGGCCCGGGAGAGCGGCCTGGGCGGCGCTaGAGGAGAGCGCCGCAGGTTGCAAGGGGTGCCCCGGGTACACCA | + |
|
Preference number: 5 (lower is better) Translates to: HRCREDGPGERPGRR*RRAPQVARGAPGTP Trigger: TGGTGTACCCGGGGCACCCCTTGCAACCTGCGGCGCTCTCCTCCAGCGCCGCCCAGGCCGCTCTCCCGGGCCATCCTCTCTACACCTATG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
||
| CDS-3UTR CAA 90 bp | CCGTTGGCCGCCGCCGCCGCTACGGAGTTGAGCTTGGATGAGGGCGGCGGGTCGTGTGGAGGACAGCGGTaGCAGGTACTCCGGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLAAAAATELSLDEGGGSCGGQR*QVLRVQ Trigger: CTGCACCCGGAGTACCTGCAACCGCTGTCCTCCACA...CGACCCGCCGCCCTCATCCAAGCTCAACTCCGTAGCGGCGGCGGCGGCCAACGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127097.9 |
||
| CDS GCA 90 bp | CCTGCTCTTTCTTGTCCAGTTCGCCGGCCCCGCCGCCGCCGTTCTTaGAGTCTGAGTGGTGTGGTGAACCTCCGCGGGAGCCGCCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PALSCPVRRPRRRRS*SLSGVVNLRGSRRE Trigger: CTCCCGGCGGCTCCCGCGGAGGTTCACCACACCACTCAGACTGCAAGAACGGCGGCGGCGGGGCCGGCGAACTGGACAAGAAAGAGCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
||
| CDS-3UTR CAA 90 bp | TCACTGCTGGTGGCACAGGGACTTCCCGAACTGAGCACCCTGGAGGGTCAAGGCGAGTCCCCCAGCTGCTaGAGCGCCGCGGCCGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLLVAQGLPELSTLEGQGESPSC*SAAAAE Trigger: CTCCGCGGCCGCGGCGCTCAAGCAGCTGGGGGACTC...GCCTTGACCCTCCAGGGTGCTCAGTTCGGGAAGTCCCTGTGCCACCAGCAGTGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
||
| CDS-3UTR CAA 90 bp | TGTGTCAGGTCCCTGTCAGCCGGCAATTTGACTGCACCGCAAGGTGTGGGTCCCTCGGATCCCAGCCCGTaGGCCGCCGCCGCCGCTACG | + |
|
Preference number: 5 (lower is better) Translates to: CVRSLSAGNLTAPQGVGPSDPSP*AAAAAT Trigger: CGTAGCGGCGGCGGCGGCCAACGGGCTGGGATCCGA...GGGACCCACACCTTGCGGTGCAGTCAAATTGCCGGCTGACAGGGACCTGACACA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
||
| CDS-3UTR CAA 90 bp | GAGGGGCTGGGCTGGATCCTGGTAGGGGTAAGCGGTAGTGGAGCTTGCAGCGTCGAGGAGCCGCTGTCTTaGCGGGAGTCGCCGCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: EGLGWILVGVSGSGACSVEEPLS*RESPPP Trigger: CGGAGGCGGCGACTCCCGCAAAGACAGCGGCTCCTC...GACGCTGCAAGCTCCACTACCGCTTACCCCTACCAGGATCCAGCCCAGCCCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
||
| CDS CCA 90 bp | TTGTCCAGTTCGCCGGCCCCGCCGCCGCCGTTCTTGCAGTCTGAGTaGTGTGGTGAACCTCCGCGGGAGCCGCCGGGAGAAGACGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSSSPAPPPPFLQSE*CGEPPREPPGEDEF Trigger: AAACTCGTCTTCTCCCGGCGGCTCCCGCGGAGGTTCACCACACCACTCAGACTGCAAGAACGGCGGCGGCGGGGCCGGCGAACTGGACAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS CCA 90 bp | GCCACCGTGAGCCGAGTCCCCGCCGCTACCTCGGCTCCCAGCGGCTaGCTCGGGACTGGGTTTGGCTTCCTGCTCTTTCTTGTCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ATVSRVPAATSAPSG*LGTGFGFLLFLVQF Trigger: GAACTGGACAAGAAAGAGCAGGAAGCCAAACCCAGTCCCGAGCCAGCCGCTGGGAGCCGAGGTAGCGGCGGGGACTCGGCTCACGGTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR CAA 90 bp | GAGGGGCTGGGCTGGATCCTGGTAGGGGTAAGCGGTAGTGGAGCTTGCAGCGTCACCCTGAAGCCCGCCTaGTCTCCGGGGGACGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: EGLGWILVGVSGSGACSVTLKPA*SPGDEE Trigger: CTCCTCGTCCCCCGGAGACAAGGCGGGCTTCAGGGT...GACGCTGCAAGCTCCACTACCGCTTACCCCTACCAGGATCCAGCCCAGCCCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR CAA 90 bp | TTAGCAAGGGAGAGCTCTGTTCACCCCACAAGAGGCCCCGCAGCCGAGGCCGGCTGTGGAGGACAGCGGTaGCAGGTACTCCGGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LARESSVHPTRGPAAEAGCGGQR*QVLRVQ Trigger: CTGCACCCGGAGTACCTGCAACCGCTGTCCTCCACA...GCCGGCCTCGGCTGCGGGGCCTCTTGTGGGGTGAACAGAGCTCTCCCTTGCTAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR CAA 90 bp | GAGGGGCTGGGCTGGATCCTGGTAGGGGTAAGCGGTAGTGGAGCTTGCAGCGTCGCTACGGAGTTGAGCTaGGATGAGGGCGGCGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: EGLGWILVGVSGSGACSVATELS*DEGGGS Trigger: CGACCCGCCGCCCTCATCCAAGCTCAACTCCGTAGC...GACGCTGCAAGCTCCACTACCGCTTACCCCTACCAGGATCCAGCCCAGCCCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR CAA 90 bp | GGGTCACTGCTGGTGGCACAGGGACTTCCCGAACTGAGCACCCTGGAGGGTCAAGGCTTGAAGCTCGACTaGTCCTCCGCGGGGGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSLLVAQGLPELSTLEGQGLKLD*SSAGES Trigger: GGACTCCCCCGCGGAGGACAAGTCGAGCTTCAAGCC...TTGACCCTCCAGGGTGCTCAGTTCGGGAAGTCCCTGTGCCACCAGCAGTGACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS TCA 90 bp | CCGCCACCCAATTGCAGCTGTGTGGCAGCGGTTCGTTCTGCAGCATaGAGCCATAGGTGTAGAGAGGATGGCCCGGGAGAGCGGCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PPPNCSCVAAVRSAA*SHRCREDGPGERPG Trigger: CCCAGGCCGCTCTCCCGGGCCATCCTCTCTACACCTATGGCTTCATGCTGCAGAACGAACCGCTGCCACACAGCTGCAATTGGGTGGCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR CAA 90 bp | TGTGTCAGGTCCCTGTCAGCCGGCAATTTGACTGCACCGCAAGGTGTGGGTCCCCCGCCGCCGCCGTTCTaGCAGTCTGAGTGGTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: CVRSLSAGNLTAPQGVGPPPPPF*QSEWCG Trigger: ACCACACCACTCAGACTGCAAGAACGGCGGCGGCGG...GGGACCCACACCTTGCGGTGCAGTCAAATTGCCGGCTGACAGGGACCTGACACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR CAA 90 bp | TCACTGCTGGTGGCACAGGGACTTCCCGAACTGAGCACCCTGGAGGGTCAAGGCCCCACCAAACCAGACTaGCTAGGATCCAGGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SLLVAQGLPELSTLEGQGPTKPD*LGSRPG Trigger: TCCTGGCCTGGATCCTAGCAAGTCTGGTTTGGTGGG...GCCTTGACCCTCCAGGGTGCTCAGTTCGGGAAGTCCCTGTGCCACCAGCAGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR CAA 90 bp | TCTTGGCAGGCTCAGTTGGAGGCCATTGGGTCACTGCTGGTGGCACAGGGACTTTGCAAGTGGAACAGCTaGAGCCGCCGAGGTGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SWQAQLEAIGSLLVAQGLCKWNS*SRRGAR Trigger: CCTCGCACCTCGGCGGCTCAAGCTGTTCCACTTGCA...AAGTCCCTGTGCCACCAGCAGTGACCCAATGGCCTCCAACTGAGCCTGCCAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR CAA 90 bp | TCACTGCTGGTGGCACAGGGACTTCCCGAACTGAGCACCCTGGAGGGTCAAGGCGCCAAAGGACTCTTCTaGGCGTCCAGCTCAATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLLVAQGLPELSTLEGQGAKGLF*ASSSIG Trigger: CCCAATTGAGCTGGACGCCAAGAAGAGTCCTTTGGC...GCCTTGACCCTCCAGGGTGCTCAGTTCGGGAAGTCCCTGTGCCACCAGCAGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS-3UTR CAA 90 bp | CGCAGGAGAAATGGCTCAACCACAGCCCTCCCGGTTAAAGGTGACTTCTCTGTATGTGGAGGACAGCGGTaGCAGGTACTCCGGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRRNGSTTALPVKGDFSVCGGQR*QVLRVQ Trigger: CTGCACCCGGAGTACCTGCAACCGCTGTCCTCCACA...TACAGAGAAGTCACCTTTAACCGGGAGGGCTGTGGTTGAGCCATTTCTCCTGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209610.2 |
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| CDS-3UTR CAA 90 bp | GTTTTAACAGTTAAGACTCATGCAAGAGACTTCCCAAGATGGGGGAAACTGAAAGAGGGCGGCTCTGACTaGCGCCCCGATGCGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLTVKTHARDFPRWGKLKEGGSD*RPDAVA Trigger: AGCCACCGCATCGGGGCGCAAGTCAGAGCCGCCCTC...TTTCAGTTTCCCCCATCTTGGGAAGTCTCTTGCATGAGTCTTAACTGTTAAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS TCA 72 bp | CACGTGGCCCGCCCCCACCAGGGCGGAGGGCGGCTCTaGCTTGCGCCCCGATGCGGTGGCTTCCGGGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: HVARPHQGGGRL*LAPRCGGFRAT Trigger: GGTGGCCCGGAAGCCACCGCATCGGGGCGCAAGTCAGAGCCGCCCTCCGCCCTGGTGGGGGCGGGCCACGTG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS GCA 72 bp | AAGCTCGACTTGTCCTCCGCGGGGGAGTCCCCCAGCTaGTTGAGCGCCGCGGCCGCGGAGGCGGCGCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: KLDLSSAGESPS*LSAAAAEAAPG Trigger: CCCCGGCGCCGCCTCCGCGGCCGCGGCGCTCAAGCAGCTGGGGGACTCCCCCGCGGAGGACAAGTCGAGCTT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS TCA 72 bp | GACTTGCGCCCCGATGCGGTGGCTTCCGGGCCACCGTaGGCCGAGTCCCCGCCGCTACCTCGGCTCCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: DLRPDAVASGPP*AESPPLPRLPA Trigger: CGCTGGGAGCCGAGGTAGCGGCGGGGACTCGGCTCACGGTGGCCCGGAAGCCACCGCATCGGGGCGCAAGTC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS CCA 72 bp | AGAGAGGATGGCCCGGGAGAGCGGCCTGGGCGGCGCTaGAGGAGAGCGCCGCAGGTTGCAAGGGGTGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: REDGPGERPGRR*RRAPQVARGAP Trigger: CGGGGCACCCCTTGCAACCTGCGGCGCTCTCCTCCAGCGCCGCCCAGGCCGCTCTCCCGGGCCATCCTCTCT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS CAA 72 bp | AGCGGCCTGGGCGGCGCTGGAGGAGAGCGCCGCAGGTaGCAAGGGGTGCCCCGGGTACACCAGAGGGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SGLGGAGGERRR*QGVPRVHQRVA Trigger: GGCTACCCTCTGGTGTACCCGGGGCACCCCTTGCAACCTGCGGCGCTCTCCTCCAGCGCCGCCCAGGCCGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS CCA 72 bp | TCGCCGGCCCCGCCGCCGCCGTTCTTGCAGTCTGAGTaGTGTGGTGAACCTCCGCGGGAGCCGCCGGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SPAPPPPFLQSE*CGEPPREPPGE Trigger: TTCTCCCGGCGGCTCCCGCGGAGGTTCACCACACCACTCAGACTGCAAGAACGGCGGCGGCGGGGCCGGCGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS CAA 90 bp | TCCCCGCCGCTACCTCGGCTCCCAGCGGCTGGCTCGGGACTGGGTTaGGCTTCCTGCTCTTTCTTGTCCAGTTCGCCGGCCCCGCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SPPLPRLPAAGSGLG*ASCSFLSSSPAPPP Trigger: CGGCGGCGGGGCCGGCGAACTGGACAAGAAAGAGCAGGAAGCCAAACCCAGTCCCGAGCCAGCCGCTGGGAGCCGAGGTAGCGGCGGGGA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS TCA 72 bp | CCCGGTCGGATCGTGCGCGCTGCAAGTGGAACAGCTTaGGCCGCCGAGGTGCGAGGCGCTGTGGTAGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PGRIVRAASGTA*AAEVRGAVVAS Trigger: GGAGGCTACCACAGCGCCTCGCACCTCGGCGGCTCAAGCTGTTCCACTTGCAGCGCGCACGATCCGACCGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS GCA 72 bp | CTCCCAGCGGCTGGCTCGGGACTGGGTTTGGCTTCCTaGTCTTTCTTGTCCAGTTCGCCGGCCCCGCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LPAAGSGLGLAS*SFLSSSPAPPP Trigger: CGGCGGCGGGGCCGGCGAACTGGACAAGAAAGAGCAGGAAGCCAAACCCAGTCCCGAGCCAGCCGCTGGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS GCA 72 bp | GAGATGCAGGTGACAAGAGGCTGCGGCTGCAGCGGCTaGAGCGGCACTGCCCAAGCTCGACGCCCCGGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: EMQVTRGCGCSG*SGTAQARRPGV Trigger: TACCCCGGGGCGTCGAGCTTGGGCAGTGCCGCTGCAGCCGCTGCAGCCGCAGCCTCTTGTCACCTGCATCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS CCA 72 bp | CGCGGGAGCCGCCGGGAGAAGACGAGTTTGATGAGGTaGAGACCGATGCCCCGTGCGGGGGAAAGGGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RGSRREKTSLMR*RPMPRAGEREG Trigger: GCCCTCCCTTTCCCCCGCACGGGGCATCGGTCTCCACCTCATCAAACTCGTCTTCTCCCGGCGGCTCCCGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS CAA 72 bp | GCCCGGTCGGATCGTGCGCGCTGCAAGTGGAACAGCTaGAGCCGCCGAGGTGCGAGGCGCTGTGGTAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ARSDRARCKWNS*SRRGARRCGSL Trigger: GAGGCTACCACAGCGCCTCGCACCTCGGCGGCTCAAGCTGTTCCACTTGCAGCGCGCACGATCCGACCGGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS CAA 90 bp | TCCTGCTCTTTCTTGTCCAGTTCGCCGGCCCCGCCGCCGCCGTTCTaGCAGTCTGAGTGGTGTGGTGAACCTCCGCGGGAGCCGCCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SCSFLSSSPAPPPPF*QSEWCGEPPREPPG Trigger: TCCCGGCGGCTCCCGCGGAGGTTCACCACACCACTCAGACTGCAAGAACGGCGGCGGCGGGGCCGGCGAACTGGACAAGAAAGAGCAGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS GCA 72 bp | TCTTGTCCAGTTCGCCGGCCCCGCCGCCGCCGTTCTTaGAGTCTGAGTGGTGTGGTGAACCTCCGCGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SCPVRRPRRRRS*SLSGVVNLRGS Trigger: GCTCCCGCGGAGGTTCACCACACCACTCAGACTGCAAGAACGGCGGCGGCGGGGCCGGCGAACTGGACAAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS GCA 72 bp | CGGCGTAGGCGCCCACGATGGAGCCGTGGTAACCGATaGTGGAGGGCGGTAGTGGGAACACCGAGTGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RRRRPRWSRGNR*WRAVVGTPSGL Trigger: CAGGCCACTCGGTGTTCCCACTACCGCCCTCCAGCATCGGTTACCACGGCTCCATCGTGGGCGCCTACGCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS CAA 90 bp | AGTGGTGTGGTGAACCTCCGCGGGAGCCGCCGGGAGAAGACGAGTTaGATGAGGTGGAGACCGATGCCCCGTGCGGGGGAAAGGGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SGVVNLRGSRREKTS*MRWRPMPRAGEREG Trigger: GCCCTCCCTTTCCCCCGCACGGGGCATCGGTCTCCACCTCATCAAACTCGTCTTCTCCCGGCGGCTCCCGCGGAGGTTCACCACACCACT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS CAA 90 bp | CTCCCAGCGGCTGGCTCGGGACTGGGTTTGGCTTCCTGCTCTTTCTaGTCCAGTTCGCCGGCCCCGCCGCCGCCGTTCTTGCAGTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LPAAGSGLGLASCSF*SSSPAPPPPFLQSE Trigger: CTCAGACTGCAAGAACGGCGGCGGCGGGGCCGGCGAACTGGACAAGAAAGAGCAGGAAGCCAAACCCAGTCCCGAGCCAGCCGCTGGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS TCA 72 bp | GGCTTGCCTGGTGGCAGGCCCAGGCCCCCGGACAGCTaGCCTCCCACCAAACCAGACTTGCTAGGATCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GLPGGRPRPPDS*PPTKPDLLGSR Trigger: CCTGGATCCTAGCAAGTCTGGTTTGGTGGGAGGTCAGCTGTCCGGGGGCCTGGGCCTGCCACCAGGCAAGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS CCA 72 bp | AGCCGAGTCCCCGCCGCTACCTCGGCTCCCAGCGGCTaGCTCGGGACTGGGTTTGGCTTCCTGCTCTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SRVPAATSAPSG*LGTGFGFLLFL Trigger: AAGAAAGAGCAGGAAGCCAAACCCAGTCCCGAGCCAGCCGCTGGGAGCCGAGGTAGCGGCGGGGACTCGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS CAA 72 bp | GTGAACCTCCGCGGGAGCCGCCGGGAGAAGACGAGTTaGATGAGGTGGAGACCGATGCCCCGTGCGGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VNLRGSRREKTS*MRWRPMPRAGE Trigger: TTCCCCCGCACGGGGCATCGGTCTCCACCTCATCAAACTCGTCTTCTCCCGGCGGCTCCCGCGGAGGTTCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS CAA 72 bp | TTCTTGTCCAGTTCGCCGGCCCCGCCGCCGCCGTTCTaGCAGTCTGAGTGGTGTGGTGAACCTCCGCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: FLSSSPAPPPPF*QSEWCGEPPRE Trigger: CTCCCGCGGAGGTTCACCACACCACTCAGACTGCAAGAACGGCGGCGGCGGGGCCGGCGAACTGGACAAGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS CAA 72 bp | GCTGGCTCGGGACTGGGTTTGGCTTCCTGCTCTTTCTaGTCCAGTTCGCCGGCCCCGCCGCCGCCGTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: AGSGLGLASCSF*SSSPAPPPPFL Trigger: CAAGAACGGCGGCGGCGGGGCCGGCGAACTGGACAAGAAAGAGCAGGAAGCCAAACCCAGTCCCGAGCCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS CCA 72 bp | CGTAGGCGCCCACGATGGAGCCGTGGTAACCGATGCTaGAGGGCGGTAGTGGGAACACCGAGTGGCCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: RRRPRWSRGNRC*RAVVGTPSGLV Trigger: AACCAGGCCACTCGGTGTTCCCACTACCGCCCTCCAGCATCGGTTACCACGGCTCCATCGTGGGCGCCTACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS CAA 72 bp | CTACCTCGGCTCCCAGCGGCTGGCTCGGGACTGGGTTaGGCTTCCTGCTCTTTCTTGTCCAGTTCGCCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LPRLPAAGSGLG*ASCSFLSSSPA Trigger: GGCCGGCGAACTGGACAAGAAAGAGCAGGAAGCCAAACCCAGTCCCGAGCCAGCCGCTGGGAGCCGAGGTAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS CAA 72 bp | AGATGGCTGAGCAGCTCCTCAGAGGTGGCAAAGCGCTaGTCGCAGGGCCCGCTGGCCGCCACCCAATTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RWLSSSSEVAKR*SQGPLAATQLQ Trigger: CTGCAATTGGGTGGCGGCCAGCGGGCCCTGCGACAAGCGCTTTGCCACCTCTGAGGAGCTGCTCAGCCATCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS CAA 90 bp | CTTGGCGTCCAGCTCAATTGGGCTGACGGGTGTGGAGGACAGCGGTaGCAGGTACTCCGGGTGCAGGAGGTGACCGGTGTGAGCGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LGVQLNWADGCGGQR*QVLRVQEVTGVSAQ Trigger: CTGAGCGCTCACACCGGTCACCTCCTGCACCCGGAGTACCTGCAACCGCTGTCCTCCACACCCGTCAGCCCAATTGAGCTGGACGCCAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS TCA 72 bp | GCGGCCAGAAGTTTCTCTGCGCCCGGCAGGGCTGTGTaGGTCCGTAGATGGCTGAGCAGCTCCTCAGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: AARSFSAPGRAV*VRRWLSSSSEV Trigger: CACCTCTGAGGAGCTGCTCAGCCATCTACGGACTCACACAGCCCTGCCGGGCGCAGAGAAACTTCTGGCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS CCA 72 bp | GCAGGGCCCGCTGGCCGCCACCCAATTGCAGCTGTGTaGCAGCGGTTCGTTCTGCAGCATGAAGCCATAGGT | + |
|
Preference number: 6 (lower is better) Translates to: AGPAGRHPIAAV*QRFVLQHEAIG Trigger: ACCTATGGCTTCATGCTGCAGAACGAACCGCTGCCACACAGCTGCAATTGGGTGGCGGCCAGCGGGCCCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS CAA 72 bp | CAGCTCAATTGGGCTGACGGGTGTGGAGGACAGCGGTaGCAGGTACTCCGGGTGCAGGAGGTGACCGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: QLNWADGCGGQR*QVLRVQEVTGV Trigger: CACACCGGTCACCTCCTGCACCCGGAGTACCTGCAACCGCTGTCCTCCACACCCGTCAGCCCAATTGAGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS CAA 72 bp | AGCCTCAATTGGGCTGACGGGTGTGGAGGACAGCGGTaGCAGGTACTCCGGGTGCAGGAGGTGACCGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SLNWADGCGGQR*QVLRVQEVTGV Trigger: CACACCGGTCACCTCCTGCACCCGGAGTACCTGCAACCGCTGTCCTCCACACCCGTCAGCCCAATTGAGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209610.2 |
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| CDS CAA 72 bp | CATCTCAATTGGGCTGACGGGTGTGGAGGACAGCGGTaGCAGGTACTCCGGGTGCAGGAGGTGACCGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: HLNWADGCGGQR*QVLRVQEVTGV Trigger: CACACCGGTCACCTCCTGCACCCGGAGTACCTGCAACCGCTGTCCTCCACACCCGTCAGCCCAATTGAGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127097.9 |
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| CDS CAA 72 bp | GAGCAGGTCTGGGCTAGCAGAGCCAAAGGACTCTTCTaGGCGTCCAGCTCAATTGGGCTGACGGGTGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: EQVWASRAKGLF*ASSSIGLTGVE Trigger: CTCCACACCCGTCAGCCCAATTGAGCTGGACGCCAAGAAGAGTCCTTTGGCTCTGCTAGCCCAGACCTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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| CDS TCA 72 bp | AATTGCAGCTGTGTGGCAGCGGTTCGTTCTGCAGCATaGAGCCATAGGTGTAGAGAGGATGGCCCGGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: NCSCVAAVRSAA*SHRCREDGPGE Trigger: CTCTCCCGGGCCATCCTCTCTACACCTATGGCTTCATGCTGCAGAACGAACCGCTGCCACACAGCTGCAATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154256.3 |
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