Pregenerated sensors for ZFP697 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050064Ensembl transcript IDs: ENSMUST00000056096.15, ENSMUST00000178372.2
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAAGTCCTAATTTACATAGCAGATGGGGCCATCCCTAGGCACCCCTaGCCCTACATGAAGCTTGAGCAGTTTCAAGAATTAGCGAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: QVLIYIADGAIPRHP*PYMKLEQFQELAKK Trigger: TTTCTTCGCTAATTCTTGAAACTGCTCAAGCTTCATGTAGGGTCAGGGGTGCCTAGGGATGGCCCCATCTGCTATGTAAATTAGGACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR CCA 90 bp | GCTGATTCTCTTATCCACAGCGATAGAAAGAACAAGAGAAGTCCATaGGTTTCTACTGCCATTACTTCACGCCATCTTGGTTATCCACAA | + |
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Preference number: 1 (lower is better) Translates to: ADSLIHSDRKNKRSP*VSTAITSRHLGYPQ Trigger: TTGTGGATAACCAAGATGGCGTGAAGTAATGGCAGTAGAAACCCATGGACTTCTCTTGTTCTTTCTATCGCTGTGGATAAGAGAATCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056096.15 |
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| 3UTR TCA 90 bp | AGCTCCCTACTAGAAATAGAAGACAGTGAGAATACTGGAATCAGGTaGCAAAGGCCAGCTTTGTCAATAAGGACATCTTTGGTCCTTCTA | + |
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Preference number: 1 (lower is better) Translates to: SSLLEIEDSENTGIR*QRPALSIRTSLVLL Trigger: TAGAAGGACCAAAGATGTCCTTATTGACAAAGCTGGCCTTTGTCACCTGATTCCAGTATTCTCACTGTCTTCTATTTCTAGTAGGGAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR TCA 90 bp | TTAATTTTTCCATCAAGTGTAAGAATGCTCAGTCTTCTTGCTTTATaGTATAAATCAGAGCACGTAAGTCATCCTCGCAACCGAGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: LIFPSSVRMLSLLAL*YKSEHVSHPRNRAW Trigger: CCAAGCTCGGTTGCGAGGATGACTTACGTGCTCTGATTTATATCATAAAGCAAGAAGACTGAGCATTCTTACACTTGATGGAAAAATTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGGCTCCACCATTCATTGCCCTGGGCCTTTCTCTGAAAGGCTTACCACACAAACCTACTCTCCACTaGCAGCTGAGACCTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: GQAPPFIALGLSLKGLPHKPTLH*QLRPGR Trigger: CCTGCCAGGTCTCAGCTGTCAGTGGAGAGTAGGTTT...GTGTGGTAAGCCTTTCAGAGAAAGGCCCAGGGCAATGAATGGTGGAGCCTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGGGCCTTTCTCTGAAAGGCTTACCACACTCCTCCCCCAGACTTTCCCCAGTTCAGACTGTCCCTCCTaGCCCTTCCCCAACATCTAC | + |
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Preference number: 2 (lower is better) Translates to: PGPFSERLTTLLPQTFPSSDCPS*PFPNIY Trigger: GTAGATGTTGGGGAAGGGGCAGGAGGGACAGTCTGA...ACTGGGGAAAGTCTGGGGGAGGAGTGTGGTAAGCCTTTCAGAGAAAGGCCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGCCTTTCTCTGAAAGGCTTACCACACTCCTCCCCCAGACTTTCCCCAGTACTGTGCCCTCCACGTaGACATGTGTGCCTCTTATA | + |
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Preference number: 2 (lower is better) Translates to: PGPFSERLTTLLPQTFPSTVPST*TCVPLI Trigger: TATAAGAGGCACACATGTCCACGTGGAGGGCACAGT...ACTGGGGAAAGTCTGGGGGAGGAGTGTGGTAAGCCTTTCAGAGAAAGGCCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGTGACAAAGGCCAGCTTTGTCAATAAGGACATCTTTGGTCCTTCTAGGCTTCTCTCCACTGACAGCTaGGACCTGGCAGGCAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: QVTKASFVNKDIFGPSRLLSTDS*DLAGKS Trigger: GGACTTGCCTGCCAGGTCTCAGCTGTCAGTGGAGAG...AAGCCTAGAAGGACCAAAGATGTCCTTATTGACAAAGCTGGCCTTTGTCACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGGGCCTTTCTCTGAAAGGCTTACCACACTCCTCCCCCAGACTTTCCCCAGTACTGTGCAGTTTTTCTaGTCGATTTCCCCAGGATGT | + |
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Preference number: 2 (lower is better) Translates to: PGPFSERLTTLLPQTFPSTVQFF*SISPGC Trigger: ACATCCTGGGGAAATCGAGCAGAAAAACTGCACAGT...ACTGGGGAAAGTCTGGGGGAGGAGTGTGGTAAGCCTTTCAGAGAAAGGCCCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCAGGCTCCACCATTCATTGCCCTGGGCCTTTCTCTGAAAGGCTTACCACACACTGTGCAGTTTTTCTaGTCGATTTCCCCAGGATGT | + |
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Preference number: 2 (lower is better) Translates to: GQAPPFIALGLSLKGLPHTVQFF*SISPGC Trigger: ACATCCTGGGGAAATCGAGCAGAAAAACTGCACAGT...GTGTGGTAAGCCTTTCAGAGAAAGGCCCAGGGCAATGAATGGTGGAGCCTGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCAGGCTCCACCATTCATTGCCCTGGGCCTTTCTCTGAAAGGCTTACCACACTCCCCAGTCACAGTTTaGAATGCTGATGTATCTCAC | + |
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Preference number: 2 (lower is better) Translates to: GQAPPFIALGLSLKGLPHSPVTV*NADVSH Trigger: GTGAGATACATCAGCATTGCAAACTGTGACTGGGGA...GTGTGGTAAGCCTTTCAGAGAAAGGCCCAGGGCAATGAATGGTGGAGCCTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR TCA 90 bp | AACTTGGCTTTCCTGCTCTACACAAATCTACACAAAGCCAGCAAAACTGAGCCACTCTCCACTGACAGCTaGGACCTGGCAGGCAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: NLAFLLYTNLHKASKTEPLSTDS*DLAGKS Trigger: GGACTTGCCTGCCAGGTCTCAGCTGTCAGTGGAGAG...TGGCTCAGTTTTGCTGGCTTTGTGTAGATTTGTGTAGAGCAGGAAAGCCAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGTGACAAAGGCCAGCTTTGTCAATAAGGACATCTTTGGTCCTTCTAGGCTTCTACACAGCCCCAAATaGCTTTCCTCGGGGTCCTCC | + |
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Preference number: 2 (lower is better) Translates to: QVTKASFVNKDIFGPSRLLHSPK*LSSGSS Trigger: GGAGGACCCCGAGGAAAGGCATTTGGGGCTGTGTAG...AAGCCTAGAAGGACCAAAGATGTCCTTATTGACAAAGCTGGCCTTTGTCACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR TCA 90 bp | CCTCCAAACAGGGCAGTTCTTACGTATACAACCACACTCACAGAATCTGGTACTAAACCTACTCTCCACTaGCAGCTGAGACCTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: PPNRAVLTYTTTLTESGTKPTLH*QLRPGR Trigger: CCTGCCAGGTCTCAGCTGTCAGTGGAGAGTAGGTTT...AGTACCAGATTCTGTGAGTGTGGTTGTATACGTAAGAACTGCCCTGTTTGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056096.15 |
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| 3UTR-3UTR TCA 90 bp | TTGATAATGGCTCTCCTGTGTGTAATAATGGCAGCAAAGGGCCAAAGCAAAACAATCCCTAGGCACCCCTaGCCCTACATGAAGCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: LIMALLCVIMAAKGQSKTIPRHP*PYMKLE Trigger: CTCAAGCTTCATGTAGGGTCAGGGGTGCCTAGGGAT...TGTTTTGCTTTGGCCCTTTGCTGCCATTATTACACACAGGAGAGCCATTATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056096.15 |
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| 3UTR-3UTR TCA 90 bp | TTGATAATGGCTCTCCTGTGTGTAATAATGGCAGCAAAGGGCCAAAGCAAAACAAGGCACCCCAACCTGTaGACTTGGCTTTCCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: LIMALLCVIMAAKGQSKTRHPNL*TWLSCS Trigger: AGAGCAGGAAAGCCAAGTTCACAGGTTGGGGTGCCT...TGTTTTGCTTTGGCCCTTTGCTGCCATTATTACACACAGGAGAGCCATTATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056096.15 |
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| 3UTR-3UTR TCA 90 bp | CAGGTGACAAAGGCCAGCTTTGTCAATAAGGACATCTTTGGTCCTTCTAGGCTTAATAGAGCTGATAAGTaGGGTGTTAGGGCAAACTCA | + |
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Preference number: 2 (lower is better) Translates to: QVTKASFVNKDIFGPSRLNRADK*GVRANS Trigger: TGAGTTTGCCCTAACACCTCACTTATCAGCTCTATT...AAGCCTAGAAGGACCAAAGATGTCCTTATTGACAAAGCTGGCCTTTGTCACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR GCA 90 bp | TCAAAAGTTGGATTACATTTCATTGGCAAACTCTTGAGAGAACTTAAAACAGGGTCAGACTGTCCCTCCTaGCCCTTCCCCAACATCTAC | + |
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Preference number: 2 (lower is better) Translates to: SKVGLHFIGKLLRELKTGSDCPS*PFPNIY Trigger: GTAGATGTTGGGGAAGGGGCAGGAGGGACAGTCTGA...CCCTGTTTTAAGTTCTCTCAAGAGTTTGCCAATGAAATGTAATCCAACTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAAAGTTGGATTACATTTCATTGGCAAACTCTTGAGAGAACTTAAAACAGGGCCTCGCAACCGAGCTTaGAACACAAAAGGGCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: SKVGLHFIGKLLRELKTGPRNRA*NTKGQA Trigger: AGCCTGCCCTTTTGTGTTCCAAGCTCGGTTGCGAGG...CCCTGTTTTAAGTTCTCTCAAGAGTTTGCCAATGAAATGTAATCCAACTTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGACAAAGGCCAGCTTTGTCAATAAGGACATCTTTGGTCCTTCTAGGCTTGGCATCTCGTATAACTaGAAAACATTCACTGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: QVTKASFVNKDIFGPSRLGISYN*KTFTVC Trigger: ACAAACAGTGAATGTTTTCCAGTTATACGAGATGCC...AAGCCTAGAAGGACCAAAGATGTCCTTATTGACAAAGCTGGCCTTTGTCACCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCCAAACAGGGCAGTTCTTACGTATACAACCACACTCACAGAATCTGGTACTACTGTTTGTGCTATTTaGCAATTTTGCATTTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: PPNRAVLTYTTTLTESGTTVCAI*QFCISN Trigger: GTTGGAAATGCAAAATTGCCAAATAGCACAAACAGT...AGTACCAGATTCTGTGAGTGTGGTTGTATACGTAAGAACTGCCCTGTTTGGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056096.15 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGACAAAGGCCAGCTTTGTCAATAAGGACATCTTTGGTCCTTCTAGGCTTACTGTTTGTGCTATTTaGCAATTTTGCATTTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: QVTKASFVNKDIFGPSRLTVCAI*QFCISN Trigger: GTTGGAAATGCAAAATTGCCAAATAGCACAAACAGT...AAGCCTAGAAGGACCAAAGATGTCCTTATTGACAAAGCTGGCCTTTGTCACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAAAGTTGGATTACATTTCATTGGCAAACTCTTGAGAGAACTTAAAACAGGGGGACAGCCAGGGCTATaGAAAGAATCCTTGGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: SKVGLHFIGKLLRELKTGGQPGL*KESLER Trigger: TCTCTCCAAGGATTCTTTCCATAGCCCTGGCTGTCC...CCCTGTTTTAAGTTCTCTCAAGAGTTTGCCAATGAAATGTAATCCAACTTTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAAAGTTGGATTACATTTCATTGGCAAACTCTTGAGAGAACTTAAAACAGGGGGGAGAGAGGGAGAATaGAGACTGCTTACAAATTGG | + |
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Preference number: 2 (lower is better) Translates to: SKVGLHFIGKLLRELKTGGREGE*RLLTNW Trigger: CCAATTTGTAAGCAGTCTTCATTCTCCCTCTCTCCC...CCCTGTTTTAAGTTCTCTCAAGAGTTTGCCAATGAAATGTAATCCAACTTTTGA 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR CAA 90 bp | TTTCCTAAGAGATCTAAGAACCAATGTATGTGGATTTCTAAACTTTaGCCCTTTGACATAACTGTGCAGTTTTTCTGCTCGATTTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: FPKRSKNQCMWISKL*PFDITVQFFCSISP Trigger: TGGGGAAATCGAGCAGAAAAACTGCACAGTTATGTCAAAGGGCAAAAGTTTAGAAATCCACATACATTGGTTCTTAGATCTCTTAGGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAAAGTTGGATTACATTTCATTGGCAAACTCTTGAGAGAACTTAAAACAGGGAATAGAGCTGATAAGTaGGGTGTTAGGGCAAACTCA | + |
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Preference number: 2 (lower is better) Translates to: SKVGLHFIGKLLRELKTGNRADK*GVRANS Trigger: TGAGTTTGCCCTAACACCTCACTTATCAGCTCTATT...CCCTGTTTTAAGTTCTCTCAAGAGTTTGCCAATGAAATGTAATCCAACTTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGGGAACTTAAGGGTAGGTAACCAAAATCTATACAAGTTATTTGACTCCAGCAAGAACCAATGTATGTaGATTTCTAAACTTTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: GGNLRVGNQNLYKLFDSSKNQCM*ISKLLP Trigger: GGGCAAAAGTTTAGAAATCCACATACATTGGTTCTT...GCTGGAGTCAAATAACTTGTATAGATTTTGGTTACCTACCCTTAAGTTCCCTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAAAGTTGGATTACATTTCATTGGCAAACTCTTGAGAGAACTTAAAACAGGGTCTCTCATTAATTTGTaGGTAATTTGGGGGTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: SKVGLHFIGKLLRELKTGSLINL*VIWGFL Trigger: CAAGAACCCCCAAATTACTCACAAATTAATGAGAGA...CCCTGTTTTAAGTTCTCTCAAGAGTTTGCCAATGAAATGTAATCCAACTTTTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAAAGTTGGATTACATTTCATTGGCAAACTCTTGAGAGAACTTAAAACAGGGAAGAACCAATGTATGTaGATTTCTAAACTTTTGCCC | + |
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Preference number: 2 (lower is better) Translates to: SKVGLHFIGKLLRELKTGKNQCM*ISKLLP Trigger: GGGCAAAAGTTTAGAAATCCACATACATTGGTTCTT...CCCTGTTTTAAGTTCTCTCAAGAGTTTGCCAATGAAATGTAATCCAACTTTTGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR TCA 72 bp | GGCAGGCTCCACCATTCATTGCCCTGGGCCTTTCTCTaGAAGGCTTACCACACTCCTCCCCCAGACTTTCCC | + |
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Preference number: 3 (lower is better) Translates to: GRLHHSLPWAFL*KAYHTPPPDFP Trigger: GGGAAAGTCTGGGGGAGGAGTGTGGTAAGCCTTTCAGAGAAAGGCCCAGGGCAATGAATGGTGGAGCCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR GCA 72 bp | AGCTTGGAACACAAAAGGGCAGGCTCCACCATTCATTaGCCTGGGCCTTTCTCTGAAAGGCTTACCACACTC | + |
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Preference number: 3 (lower is better) Translates to: SLEHKRAGSTIH*PGPFSERLTTL Trigger: GAGTGTGGTAAGCCTTTCAGAGAAAGGCCCAGGGCAATGAATGGTGGAGCCTGCCCTTTTGTGTTCCAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR TCA 72 bp | TTAGGGCAAACTCAGGCTTACCATGCCCCGGGAGTGTaGCATTCTTATTTCTACCCGCTTTTTGTTGTACGC | + |
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Preference number: 3 (lower is better) Translates to: LGQTQAYHAPGV*HSYFYPLFVVR Trigger: GCGTACAACAAAAAGCGGGTAGAAATAAGAATGTCACACTCCCGGGGCATGGTAAGCCTGAGTTTGCCCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGTGACAAAGGCCAGCTTTGTCAATAAGGACATCTTTGGTCCTTCTAGGCTTCTTCTAAGAGTTACTTaGAAGGTGGAGGTAGGCACC | + |
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Preference number: 3 (lower is better) Translates to: QVTKASFVNKDIFGPSRLLLRVT*KVEVGT Trigger: GGTGCCTACCTCCACCTTCAAAGTAACTCTTAGAAG...AAGCCTAGAAGGACCAAAGATGTCCTTATTGACAAAGCTGGCCTTTGTCACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR TCA 72 bp | ATTTACATAGCAGATGGGGCCATCCCTAGGCACCCCTaGCCCTACATGAAGCTTGAGCAGTTTCAAGAATTA | + |
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Preference number: 3 (lower is better) Translates to: IYIADGAIPRHP*PYMKLEQFQEL Trigger: TAATTCTTGAAACTGCTCAAGCTTCATGTAGGGTCAGGGGTGCCTAGGGATGGCCCCATCTGCTATGTAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR CAA 90 bp | AACTTGGCTTTCCTGCTCTACACAAATCTACACAAAGCCAGCAAAACTGAGCCACTTCTAAGAGTTACTTaGAAGGTGGAGGTAGGCACC | + |
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Preference number: 3 (lower is better) Translates to: NLAFLLYTNLHKASKTEPLLRVT*KVEVGT Trigger: GGTGCCTACCTCCACCTTCAAAGTAACTCTTAGAAG...TGGCTCAGTTTTGCTGGCTTTGTGTAGATTTGTGTAGAGCAGGAAAGCCAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCCAAACAGGGCAGTTCTTACGTATACAACCACACTCACAGAATCTGGTACTCTTCTGCTAAGGGGTTaGGCTCAGATAAGGAATAAC | + |
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Preference number: 3 (lower is better) Translates to: PPNRAVLTYTTTLTESGTLLLRG*AQIRNN Trigger: GTTATTCCTTATCTGAGCCAAACCCCTTAGCAGAAG...AGTACCAGATTCTGTGAGTGTGGTTGTATACGTAAGAACTGCCCTGTTTGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056096.15 |
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| 3UTR GCA 72 bp | CTAGACAGCATGAGTCAGAATAGGCGGCACAGACTTTaGAAGTGTAAGTCTTCACTAAAGAAGACTGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: LDSMSQNRRHRL*KCKSSLKKTEE Trigger: CTCTTCAGTCTTCTTTAGTGAAGACTTACACTTGCAAAGTCTGTGCCGCCTATTCTGACTCATGCTGTCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR CCA 72 bp | CTTATCCACAGCGATAGAAAGAACAAGAGAAGTCCATaGGTTTCTACTGCCATTACTTCACGCCATCTTGGT | + |
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Preference number: 3 (lower is better) Translates to: LIHSDRKNKRSP*VSTAITSRHLG Trigger: ACCAAGATGGCGTGAAGTAATGGCAGTAGAAACCCATGGACTTCTCTTGTTCTTTCTATCGCTGTGGATAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056096.15 |
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| 3UTR TCA 72 bp | CCATCAAGTGTAAGAATGCTCAGTCTTCTTGCTTTATaGTATAAATCAGAGCACGTAAGTCATCCTCGCAAC | + |
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Preference number: 3 (lower is better) Translates to: PSSVRMLSLLAL*YKSEHVSHPRN Trigger: GTTGCGAGGATGACTTACGTGCTCTGATTTATATCATAAAGCAAGAAGACTGAGCATTCTTACACTTGATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR TCA 72 bp | CTAGAAATAGAAGACAGTGAGAATACTGGAATCAGGTaGCAAAGGCCAGCTTTGTCAATAAGGACATCTTTG | + |
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Preference number: 3 (lower is better) Translates to: LEIEDSENTGIR*QRPALSIRTSL Trigger: CAAAGATGTCCTTATTGACAAAGCTGGCCTTTGTCACCTGATTCCAGTATTCTCACTGTCTTCTATTTCTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| 3UTR CCA 72 bp | GCAGGATTTCCTAAGAGATCTAAGAACCAATGTATGTaGATTTCTAAACTTTTGCCCTTTGACATAACTGTG | + |
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Preference number: 3 (lower is better) Translates to: AGFPKRSKNQCM*ISKLLPFDITV Trigger: CACAGTTATGTCAAAGGGCAAAAGTTTAGAAATCCACATACATTGGTTCTTAGATCTCTTAGGAAATCCTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| CDS-3UTR TCA 90 bp | GGGCAGGCTCCACCATTCATTGCCCTGGGCCTTTCTCTGAAAGGCTTACCACACGCAGGCGCCGGTGCTTaGGCAGGTCGGCGCGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GQAPPFIALGLSLKGLPHAGAGA*AGRRAS Trigger: GCTGGCGCGCCGACCTGCTCAAGCACCGGCGCCTGC...GTGTGGTAAGCCTTTCAGAGAAAGGCCCAGGGCAATGAATGGTGGAGCCTGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| CDS-3UTR GCA 90 bp | GTGGCAAACACCAAAAGGCTCCCCCAGACACTCTCAGACTGTCCCTCCTGCCCCTGGATGCGCTGGTGCTaGAGGAATGCGGCGCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: VANTKRLPQTLSDCPSCPWMRWC*RNAAPG Trigger: CCCGGGCGCCGCATTCCTGCAGCACCAGCGCATCCA...GGGGCAGGAGGGACAGTCTGAGAGTGTCTGGGGGAGCCTTTTGGTGTTTGCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| CDS-3UTR TCA 90 bp | GTGGCAAACACCAAAAGGCTCCCCCAGACACTCTCAGACTGTCCCTCCTGCCCCTCCATGGCCATGGGGTaGTGGAGCCGGTGGAAGCGG | + |
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Preference number: 4 (lower is better) Translates to: VANTKRLPQTLSDCPSCPSMAMG*WSRWKR Trigger: CCGCTTCCACCGGCTCCATCACCCCATGGCCATGGA...GGGGCAGGAGGGACAGTCTGAGAGTGTCTGGGGGAGCCTTTTGGTGTTTGCCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| CDS-3UTR CCA 90 bp | GGGCAGGCTCCACCATTCATTGCCCTGGGCCTTTCTCTGAAAGGCTTACCACACCGAAGGGCTCCAAGCTaGCCACGGCGGCGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GQAPPFIALGLSLKGLPHRRAPS*PRRRPL Trigger: CAGAGGCCGCCGCCGTGGCCAGCTTGGAGCCCTTCG...GTGTGGTAAGCCTTTCAGAGAAAGGCCCAGGGCAATGAATGGTGGAGCCTGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR TCA 90 bp | GTGGCAAACACCAAAAGGCTCCCCCAGACACTCTCAGACTGTCCCTCCTGCCCCGTGTGGATGCGCTGGTaGTTGGCCAGATGCGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VANTKRLPQTLSDCPSCPVWMRW*LARCER Trigger: CCGCTCGCATCTGGCCAATCACCAGCGCATCCACAC...GGGGCAGGAGGGACAGTCTGAGAGTGTCTGGGGGAGCCTTTTGGTGTTTGCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR GCA 90 bp | CCTGGGCCTTTCTCTGAAAGGCTTACCACACTCCTCCCCCAGACTTTCCCCAGTGGCGCACGAACCCCTTaGCGCACTCCCCGCATGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PGPFSERLTTLLPQTFPSGARTP*RTPRMR Trigger: TCGCATGCGGGGAGTGCGGCAAGGGGTTCGTGCGCC...ACTGGGGAAAGTCTGGGGGAGGAGTGTGGTAAGCCTTTCAGAGAAAGGCCCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCAAACACCAAAAGGCTCCCCCAGACACTCTCAGACTGTCCCTCCTGCCCCGTTCCCCGAGGTCCATaGCCATGGGGTGATGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VANTKRLPQTLSDCPSCPVPRGP*PWGDGA Trigger: GGCTCCATCACCCCATGGCCATGGACCTCGGGGAAC...GGGGCAGGAGGGACAGTCTGAGAGTGTCTGGGGGAGCCTTTTGGTGTTTGCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCAAACACCAAAAGGCTCCCCCAGACACTCTCAGACTGTCCCTCCTGCCCCGCAGCCGCAGGTGGTTaGTCAGGTAGGTGTTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VANTKRLPQTLSDCPSCPAAAGG*SGRCCG Trigger: GCCGCAACACCTACCTGACCAACCACCTGCGGCTGC...GGGGCAGGAGGGACAGTCTGAGAGTGTCTGGGGGAGCCTTTTGGTGTTTGCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CCA 90 bp | TGGGGTCAGGGCACACGCATGCAAATGAAGGCACCCCAACCTGTGAACTTGGCTAGGCGGTGGATGCGCTaGTGCTGCAGGAATGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: WGQGTRMQMKAPQPVNLARRWMR*CCRNAA Trigger: CGCCGCATTCCTGCAGCACCAGCGCATCCACCGCCT...AGCCAAGTTCACAGGTTGGGGTGCCTTCATTTGCATGCGTGTGCCCTGACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCCTTTCTCTGAAAGGCTTACCACACTCCTCCCCCAGACTTTCCCCAGTCGAGGTCCATGGCCATaGGGTGATGGAGCCGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGPFSERLTTLLPQTFPSRGPWP*GDGAGG Trigger: TCCACCGGCTCCATCACCCCATGGCCATGGACCTCG...ACTGGGGAAAGTCTGGGGGAGGAGTGTGGTAAGCCTTTCAGAGAAAGGCCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCCTTTCTCTGAAAGGCTTACCACACTCCTCCCCCAGACTTTCCCCAGTGCAGCCGCAGGTGGTTaGTCAGGTAGGTGTTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGPFSERLTTLLPQTFPSAAAGG*SGRCCG Trigger: GCCGCAACACCTACCTGACCAACCACCTGCGGCTGC...ACTGGGGAAAGTCTGGGGGAGGAGTGTGGTAAGCCTTTCAGAGAAAGGCCCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CCA 90 bp | TGGGGTCAGGGCACACGCATGCAAATGAAGGCACCCCAACCTGTGAACTTGGCTGGATGCGCTGGTGATTaGCCAGATGCGAGCGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: WGQGTRMQMKAPQPVNLAGCAGD*PDASGA Trigger: TGCGCCGCTCGCATCTGGCCAATCACCAGCGCATCC...AGCCAAGTTCACAGGTTGGGGTGCCTTCATTTGCATGCGTGTGCCCTGACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR GCA 90 bp | TGGGGTCAGGGCACACGCATGCAAATGAAGGCACCCCAACCTGTGAACTTGGCTCCACGCCCATACCCATaGCCATCATCCCCACCACTC | + |
|
Preference number: 4 (lower is better) Translates to: WGQGTRMQMKAPQPVNLAPRPYP*PSSPPL Trigger: GAGTGGTGGGGATGATGGGCATGGGTATGGGCGTGG...AGCCAAGTTCACAGGTTGGGGTGCCTTCATTTGCATGCGTGTGCCCTGACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGCTCCACCATTCATTGCCCTGGGCCTTTCTCTGAAAGGCTTACCACACTCAGCCACACCAGGCTaGTCGTCCTCTTCCTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: GQAPPFIALGLSLKGLPHSATPG*SSSSSR Trigger: CCGTGAGGAAGAGGACGACCAGCCTGGTGTGGCTGA...GTGTGGTAAGCCTTTCAGAGAAAGGCCCAGGGCAATGAATGGTGGAGCCTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR TCA 90 bp | AACTTGGCTTTCCTGCTCTACACAAATCTACACAAAGCCAGCAAAACTGAGCCAGCAGGCGCCGGTGCTTaGGCAGGTCGGCGCGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NLAFLLYTNLHKASKTEPAGAGA*AGRRAS Trigger: GCTGGCGCGCCGACCTGCTCAAGCACCGGCGCCTGC...TGGCTCAGTTTTGCTGGCTTTGTGTAGATTTGTGTAGAGCAGGAAAGCCAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR GCA 90 bp | TGGGGTCAGGGCACACGCATGCAAATGAAGGCACCCCAACCTGTGAACTTGGCTTGTAGCGGAAGCCCTTaGCACAGCCCGCGCATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: WGQGTRMQMKAPQPVNLACSGSP*HSPRIC Trigger: ACAAATGCGCGGGCTGTGGCAAGGGCTTCCGCTACA...AGCCAAGTTCACAGGTTGGGGTGCCTTCATTTGCATGCGTGTGCCCTGACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CCA 90 bp | GTGGCAAACACCAAAAGGCTCCCCCAGACACTCTCAGACTGTCCCTCCTGCCCCACTTCCTGCTCCAGGTaGCCTCTATCTTCTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VANTKRLPQTLSDCPSCPTSCSR*PLSSVS Trigger: GGACACAGAAGATAGAGGCCACCTGGAGCAGGAAGT...GGGGCAGGAGGGACAGTCTGAGAGTGTCTGGGGGAGCCTTTTGGTGTTTGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR GCA 90 bp | AAAATAGCAGCTGGGGCTCATAGAAAGGGAAGTGGATACTTAGCAACCTCTTCTCACGGCGGCGGCCTCTaGCAGGCGGTGGATGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KIAAGAHRKGSGYLATSSHGGGL*QAVDAL Trigger: CAGCGCATCCACCGCCTGGCAGAGGCCGCCGCCGTG...AGAAGAGGTTGCTAAGTATCCACTTCCCTTTCTATGAGCCCCAGCTGCTATTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR TCA 90 bp | CAGGTGACAAAGGCCAGCTTTGTCAATAAGGACATCTTTGGTCCTTCTAGGCTTCCGCCCAGGGAGAGGTaGCGCCTCCAAGGAAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: QVTKASFVNKDIFGPSRLPPRER*RLQGST Trigger: CGTGCTTCCTTGGAGGCGTCACCTCTCCCTGGGCGG...AAGCCTAGAAGGACCAAAGATGTCCTTATTGACAAAGCTGGCCTTTGTCACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR TCA 90 bp | AAAATAGCAGCTGGGGCTCATAGAAAGGGAAGTGGATACTTAGCAACCTCTTCTCGGTGGAAGCGGCGGTaGGCAGGCTTGTCACCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KIAAGAHRKGSGYLATSSRWKRR*AGLSPR Trigger: CCGGGGTGACAAGCCTGCTCACCGCCGCTTCCACCG...AGAAGAGGTTGCTAAGTATCCACTTCCCTTTCTATGAGCCCCAGCTGCTATTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR TCA 90 bp | CCTCCAAACAGGGCAGTTCTTACGTATACAACCACACTCACAGAATCTGGTACTGCACGCGCAGGTGGTTaGCGAGGTGCGAGTTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPNRAVLTYTTTLTESGTARAGG*RGASCG Trigger: GCCGCAACTCGCACCTCGTCAACCACCTGCGCGTGC...AGTACCAGATTCTGTGAGTGTGGTTGTATACGTAAGAACTGCCCTGTTTGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056096.15 |
||
| CDS-3UTR GCA 90 bp | GGGCAGGCTCCACCATTCATTGCCCTGGGCCTTTCTCTGAAAGGCTTACCACACGCGGACTCCGGGATATaGTGTCAGATTCTGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GQAPPFIALGLSLKGLPHADSGI*CQILTV Trigger: GACTGTCAGAATCTGACAGCATATCCCGGAGTCCGC...GTGTGGTAAGCCTTTCAGAGAAAGGCCCAGGGCAATGAATGGTGGAGCCTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCCTTTCTCTGAAAGGCTTACCACACTCCTCCCCCAGACTTTCCCCAGTACTTCCTGCTCCAGGTaGCCTCTATCTTCTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGPFSERLTTLLPQTFPSTSCSR*PLSSVS Trigger: GGACACAGAAGATAGAGGCCACCTGGAGCAGGAAGT...ACTGGGGAAAGTCTGGGGGAGGAGTGTGGTAAGCCTTTCAGAGAAAGGCCCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGCTCCACCATTCATTGCCCTGGGCCTTTCTCTGAAAGGCTTACCACACCATCATCCTGTGGGTTaGAGTCCACTTCCTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GQAPPFIALGLSLKGLPHHHPVG*SPLPAP Trigger: TGGAGCAGGAAGTGGACTCCAACCCACAGGATGATG...GTGTGGTAAGCCTTTCAGAGAAAGGCCCAGGGCAATGAATGGTGGAGCCTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CCA 90 bp | TGGGGTCAGGGCACACGCATGCAAATGAAGGCACCCCAACCTGTGAACTTGGCTCCTCTGAACAGACAGTaGACGCTATGTCCCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: WGQGTRMQMKAPQPVNLAPLNRQ*TLCPSL Trigger: GAGAGAGGGACATAGCGTCCACTGTCTGTTCAGAGG...AGCCAAGTTCACAGGTTGGGGTGCCTTCATTTGCATGCGTGTGCCCTGACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGCTCCACCATTCATTGCCCTGGGCCTTTCTCTGAAAGGCTTACCACACCCTCTGAACAGACAGTaGACGCTATGTCCCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GQAPPFIALGLSLKGLPHPLNRQ*TLCPSL Trigger: GAGAGAGGGACATAGCGTCCACTGTCTGTTCAGAGG...GTGTGGTAAGCCTTTCAGAGAAAGGCCCAGGGCAATGAATGGTGGAGCCTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| CDS-3UTR TCA 90 bp | CCTGGGCCTTTCTCTGAAAGGCTTACCACACTCCTCCCCCAGACTTTCCCCAGTTATGCTGTCAGATTCTaGCAGTCCTGGGAACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGPFSERLTTLLPQTFPSYAVRF*QSWEQS Trigger: GCTCTGTTCCCAGGACTGTCAGAATCTGACAGCATA...ACTGGGGAAAGTCTGGGGGAGGAGTGTGGTAAGCCTTTCAGAGAAAGGCCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR GCA 90 bp | AAAATAGCAGCTGGGGCTCATAGAAAGGGAAGTGGATACTTAGCAACCTCTTCTTGGATGCGCTGGTGCTaGAGGAATGCGGCGCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KIAAGAHRKGSGYLATSSWMRWC*RNAAPG Trigger: CCCGGGCGCCGCATTCCTGCAGCACCAGCGCATCCA...AGAAGAGGTTGCTAAGTATCCACTTCCCTTTCTATGAGCCCCAGCTGCTATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| CDS-3UTR CCA 90 bp | TACTTTGAAGGTGGAGGTAGGCACCTCGAAGTAACAACTCTTATTAACCATCTCCGAAGGGCTCCAAGCTaGCCACGGCGGCGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YFEGGGRHLEVTTLINHLRRAPS*PRRRPL Trigger: CAGAGGCCGCCGCCGTGGCCAGCTTGGAGCCCTTCG...GAGATGGTTAATAAGAGTTGTTACTTCGAGGTGCCTACCTCCACCTTCAAAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| CDS-3UTR GCA 90 bp | GGAGGGAACTTAAGGGTAGGTAACCAAAATCTATACAAGTTATTTGACTCCAGCGTGTGCAGGCGCCGGTaGTTGAGCAGGTCGGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GGNLRVGNQNLYKLFDSSVCRRR*LSRSAR Trigger: GCGCGCCGACCTGCTCAAGCACCGGCGCCTGCACAC...GCTGGAGTCAAATAACTTGTATAGATTTTGGTTACCTACCCTTAAGTTCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| CDS-3UTR CCA 90 bp | CCTGGGCCTTTCTCTGAAAGGCTTACCACACTCCTCCCCCAGACTTTCCCCAGTCACGGGAGTAGGCAATaGATCTTCCTCCTCTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: PGPFSERLTTLLPQTFPSHGSRQ*IFLLYQ Trigger: TTGATAGAGGAGGAAGATCCATTGCCTACTCCCGTG...ACTGGGGAAAGTCTGGGGGAGGAGTGTGGTAAGCCTTTCAGAGAAAGGCCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR GCA 90 bp | CCTAAGAGATCTAAGAACCAATGTATGTGGATTTCTAAACTTTTGCCCTTTGACCACGGCGGCGGCCTCTaGCAGGCGGTGGATGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PKRSKNQCMWISKLLPFDHGGGL*QAVDAL Trigger: CAGCGCATCCACCGCCTGGCAGAGGCCGCCGCCGTG...GTCAAAGGGCAAAAGTTTAGAAATCCACATACATTGGTTCTTAGATCTCTTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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| CDS-3UTR GCA 90 bp | GGAGGGAACTTAAGGGTAGGTAACCAAAATCTATACAAGTTATTTGACTCCAGCGGCGCACGAACCCCTTaGCGCACTCCCCGCATGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GGNLRVGNQNLYKLFDSSGARTP*RTPRMR Trigger: TCGCATGCGGGGAGTGCGGCAAGGGGTTCGTGCGCC...GCTGGAGTCAAATAACTTGTATAGATTTTGGTTACCTACCCTTAAGTTCCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR GCA 90 bp | CAGGTGACAAAGGCCAGCTTTGTCAATAAGGACATCTTTGGTCCTTCTAGGCTTGAGTGCGTGCGCTTGTaGGTGAAGAGGTGCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QVTKASFVNKDIFGPSRLECVRL*VKRCEL Trigger: GAGCTCGCACCTCTTCACGCACAAGCGCACGCACTC...AAGCCTAGAAGGACCAAAGATGTCCTTATTGACAAAGCTGGCCTTTGTCACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CCA 90 bp | TTGATAATGGCTCTCCTGTGTGTAATAATGGCAGCAAAGGGCCAAAGCAAAACAAGGCGGTGGATGCGCTaGTGCTGCAGGAATGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LIMALLCVIMAAKGQSKTRRWMR*CCRNAA Trigger: CGCCGCATTCCTGCAGCACCAGCGCATCCACCGCCT...TGTTTTGCTTTGGCCCTTTGCTGCCATTATTACACACAGGAGAGCCATTATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056096.15 |
||
| CDS-3UTR TCA 90 bp | TTGATAATGGCTCTCCTGTGTGTAATAATGGCAGCAAAGGGCCAAAGCAAAACAGTGTGGATGCGCTGGTaGTTGGCCAGATGCGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LIMALLCVIMAAKGQSKTVWMRW*LARCER Trigger: CCGCTCGCATCTGGCCAATCACCAGCGCATCCACAC...TGTTTTGCTTTGGCCCTTTGCTGCCATTATTACACACAGGAGAGCCATTATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056096.15 |
||
| CDS-3UTR GCA 90 bp | TTCACTCTTCGCAGTGTGTATTTAAGTAAGCTATCAAGTCAAGCACATCTTCTAGTGTGCAGGCGCCGGTaGTTGAGCAGGTCGGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FTLRSVYLSKLSSQAHLLVCRRR*LSRSAR Trigger: GCGCGCCGACCTGCTCAAGCACCGGCGCCTGCACAC...TAGAAGATGTGCTTGACTTGATAGCTTACTTAAATACACACTGCGAAGAGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR GCA 90 bp | AAAATAGCAGCTGGGGCTCATAGAAAGGGAAGTGGATACTTAGCAACCTCTTCTGAGTGCGTGCGCTTGTaGGTGAAGAGGTGCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KIAAGAHRKGSGYLATSSECVRL*VKRCEL Trigger: GAGCTCGCACCTCTTCACGCACAAGCGCACGCACTC...AGAAGAGGTTGCTAAGTATCCACTTCCCTTTCTATGAGCCCCAGCTGCTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR TCA 90 bp | TTCACTCTTCGCAGTGTGTATTTAAGTAAGCTATCAAGTCAAGCACATCTTCTAGCACGCGCAGGTGGTTaGCGAGGTGCGAGTTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FTLRSVYLSKLSSQAHLLARAGG*RGASCG Trigger: GCCGCAACTCGCACCTCGTCAACCACCTGCGCGTGC...TAGAAGATGTGCTTGACTTGATAGCTTACTTAAATACACACTGCGAAGAGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR GCA 90 bp | TTGATAATGGCTCTCCTGTGTGTAATAATGGCAGCAAAGGGCCAAAGCAAAACACCACGCCCATACCCATaGCCATCATCCCCACCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LIMALLCVIMAAKGQSKTPRPYP*PSSPPL Trigger: GAGTGGTGGGGATGATGGGCATGGGTATGGGCGTGG...TGTTTTGCTTTGGCCCTTTGCTGCCATTATTACACACAGGAGAGCCATTATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056096.15 |
||
| CDS-3UTR GCA 90 bp | AACTTGGCTTTCCTGCTCTACACAAATCTACACAAAGCCAGCAAAACTGAGCCATGTAGCGGAAGCCCTTaGCACAGCCCGCGCATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NLAFLLYTNLHKASKTEPCSGSP*HSPRIC Trigger: ACAAATGCGCGGGCTGTGGCAAGGGCTTCCGCTACA...TGGCTCAGTTTTGCTGGCTTTGTGTAGATTTGTGTAGAGCAGGAAAGCCAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGGAACTTAAGGGTAGGTAACCAAAATCTATACAAGTTATTTGACTCCAGCGGATGCGCTGGTGATTaGCCAGATGCGAGCGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GGNLRVGNQNLYKLFDSSGCAGD*PDASGA Trigger: TGCGCCGCTCGCATCTGGCCAATCACCAGCGCATCC...GCTGGAGTCAAATAACTTGTATAGATTTTGGTTACCTACCCTTAAGTTCCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCCAAGCTTTTCACTCTTCGCAGTGTGTATTTAAGTAAGCTATCAAGTCAACCGCCCAGGGAGAGGTaGCGCCTCCAAGGAAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: FSKLFTLRSVYLSKLSSQPPRER*RLQGST Trigger: CGTGCTTCCTTGGAGGCGTCACCTCTCCCTGGGCGG...TTGACTTGATAGCTTACTTAAATACACACTGCGAAGAGTGAAAAGCTTGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR GCA 90 bp | CCTCCAAACAGGGCAGTTCTTACGTATACAACCACACTCACAGAATCTGGTACTTTGGAGTCCACTTCCTaGTCCAGGTGGCCTCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: PPNRAVLTYTTTLTESGTLESTS*SRWPLS Trigger: AGATAGAGGCCACCTGGAGCAGGAAGTGGACTCCAA...AGTACCAGATTCTGTGAGTGTGGTTGTATACGTAAGAACTGCCCTGTTTGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056096.15 |
||
| 3UTR CAA 72 bp | ACACGCATGCAAATGAAGGCACCCCAACCTGTGAACTaGGCTTTCCTGCTCTACACAAATCTACACAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TRMQMKAPQPVN*AFLLYTNLHKA Trigger: GGCTTTGTGTAGATTTGTGTAGAGCAGGAAAGCCAAGTTCACAGGTTGGGGTGCCTTCATTTGCATGCGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCCAAGCTTTTCACTCTTCGCAGTGTGTATTTAAGTAAGCTATCAAGTCAATCCATGGCCATGGGGTaGTGGAGCCGGTGGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FSKLFTLRSVYLSKLSSQSMAMG*WSRWKR Trigger: CCGCTTCCACCGGCTCCATCACCCCATGGCCATGGA...TTGACTTGATAGCTTACTTAAATACACACTGCGAAGAGTGAAAAGCTTGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR TCA 90 bp | TTCACTCTTCGCAGTGTGTATTTAAGTAAGCTATCAAGTCAAGCACATCTTCTAGCGTGGAGAAGTCGCTaGAGCGCTTCTCGCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FTLRSVYLSKLSSQAHLLAWRSR*SASRTG Trigger: GCCAGTGCGAGAAGCGCTTCAGCGACTTCTCCACGC...TAGAAGATGTGCTTGACTTGATAGCTTACTTAAATACACACTGCGAAGAGTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR GCA 90 bp | TTCACTCTTCGCAGTGTGTATTTAAGTAAGCTATCAAGTCAAGCACATCTTCTACTGGTGCTGCAGGAATaGGGCGCCCGGGCTAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FTLRSVYLSKLSSQAHLLLVLQE*GARAKA Trigger: AGCTTTAGCCCGGGCGCCGCATTCCTGCAGCACCAG...TAGAAGATGTGCTTGACTTGATAGCTTACTTAAATACACACTGCGAAGAGTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CCA 90 bp | CCTAAGAGATCTAAGAACCAATGTATGTGGATTTCTAAACTTTTGCCCTTTGACCGAGGTCCATGGCCATaGGGTGATGGAGCCGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PKRSKNQCMWISKLLPFDRGPWP*GDGAGG Trigger: TCCACCGGCTCCATCACCCCATGGCCATGGACCTCG...GTCAAAGGGCAAAAGTTTAGAAATCCACATACATTGGTTCTTAGATCTCTTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CCA 90 bp | TTCACTCTTCGCAGTGTGTATTTAAGTAAGCTATCAAGTCAAGCACATCTTCTAGTTCCCCGAGGTCCATaGCCATGGGGTGATGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FTLRSVYLSKLSSQAHLLVPRGP*PWGDGA Trigger: GGCTCCATCACCCCATGGCCATGGACCTCGGGGAAC...TAGAAGATGTGCTTGACTTGATAGCTTACTTAAATACACACTGCGAAGAGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR TCA 90 bp | TTTTCCAAGCTTTTCACTCTTCGCAGTGTGTATTTAAGTAAGCTATCAAGTCAAGCGTGGAGAAGTCGCTaGAGCGCTTCTCGCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSKLFTLRSVYLSKLSSQAWRSR*SASRTG Trigger: GCCAGTGCGAGAAGCGCTTCAGCGACTTCTCCACGC...TTGACTTGATAGCTTACTTAAATACACACTGCGAAGAGTGAAAAGCTTGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CCA 90 bp | TTCACTCTTCGCAGTGTGTATTTAAGTAAGCTATCAAGTCAAGCACATCTTCTATCAGCCACACCAGGCTaGTCGTCCTCTTCCTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: FTLRSVYLSKLSSQAHLLSATPG*SSSSSR Trigger: CCGTGAGGAAGAGGACGACCAGCCTGGTGTGGCTGA...TAGAAGATGTGCTTGACTTGATAGCTTACTTAAATACACACTGCGAAGAGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| 3UTR CAA 72 bp | CTCGGTGTGGCTGGACAGTTTCTTCTGCTAAGGGGTTaGGCTCAGATAAGGAATAACACAGTAGCTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGVAGQFLLLRG*AQIRNNTVADS Trigger: AGAATCAGCTACTGTGTTATTCCTTATCTGAGCCAAACCCCTTAGCAGAAGAAACTGTCCAGCCACACCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR TCA 90 bp | TCAAAAGTTGGATTACATTTCATTGGCAAACTCTTGAGAGAACTTAAAACAGGGTGGTGGGCGCGTCCATaGTACTGGCCATCAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SKVGLHFIGKLLRELKTGWWARP*YWPSGC Trigger: ACAGCCTGATGGCCAGTATCATGGACGCGCCCACCA...CCCTGTTTTAAGTTCTCTCAAGAGTTTGCCAATGAAATGTAATCCAACTTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGGAACTTAAGGGTAGGTAACCAAAATCTATACAAGTTATTTGACTCCAGCGCGGACTCCGGGATATaGTGTCAGATTCTGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GGNLRVGNQNLYKLFDSSADSGI*CQILTV Trigger: GACTGTCAGAATCTGACAGCATATCCCGGAGTCCGC...GCTGGAGTCAAATAACTTGTATAGATTTTGGTTACCTACCCTTAAGTTCCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR TCA 90 bp | GGAGGGAACTTAAGGGTAGGTAACCAAAATCTATACAAGTTATTTGACTCCAGCTATGCTGTCAGATTCTaGCAGTCCTGGGAACAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GGNLRVGNQNLYKLFDSSYAVRF*QSWEQS Trigger: GCTCTGTTCCCAGGACTGTCAGAATCTGACAGCATA...GCTGGAGTCAAATAACTTGTATAGATTTTGGTTACCTACCCTTAAGTTCCCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR GCA 90 bp | TTTTCCAAGCTTTTCACTCTTCGCAGTGTGTATTTAAGTAAGCTATCAAGTCAATCTCGCCGGTGTGGATaGGCTGGTGATTGGCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSKLFTLRSVYLSKLSSQSRRCG*AGDWPD Trigger: ATCTGGCCAATCACCAGCGCATCCACACCGGCGAGA...TTGACTTGATAGCTTACTTAAATACACACTGCGAAGAGTGAAAAGCTTGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR GCA 90 bp | TCAAAAGTTGGATTACATTTCATTGGCAAACTCTTGAGAGAACTTAAAACAGGGTCTCGCCGGTGTGGATaGGCTGGTGATTGGCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SKVGLHFIGKLLRELKTGSRRCG*AGDWPD Trigger: ATCTGGCCAATCACCAGCGCATCCACACCGGCGAGA...CCCTGTTTTAAGTTCTCTCAAGAGTTTGCCAATGAAATGTAATCCAACTTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CCA 90 bp | AAAATAGCAGCTGGGGCTCATAGAAAGGGAAGTGGATACTTAGCAACCTCTTCTATCTTCTGTGTCCCATaGATTAGAGCCCATTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KIAAGAHRKGSGYLATSSIFCVP*IRAHSS Trigger: AGAGGAATGGGCTCTAATCCATGGGACACAGAAGAT...AGAAGAGGTTGCTAAGTATCCACTTCCCTTTCTATGAGCCCCAGCTGCTATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CCA 90 bp | CCTAAGAGATCTAAGAACCAATGTATGTGGATTTCTAAACTTTTGCCCTTTGACCACAAGTGCAACTTCTaGTGCTGTGCAAGGTGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PKRSKNQCMWISKLLPFDHKCNF*CCARCV Trigger: GACGCACCTTGCACAGCACCAGAAGTTGCACTTGTG...GTCAAAGGGCAAAAGTTTAGAAATCCACATACATTGGTTCTTAGATCTCTTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR GCA 90 bp | TCAAAAGTTGGATTACATTTCATTGGCAAACTCTTGAGAGAACTTAAAACAGGGTTGGAGTCCACTTCCTaGTCCAGGTGGCCTCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: SKVGLHFIGKLLRELKTGLESTS*SRWPLS Trigger: AGATAGAGGCCACCTGGAGCAGGAAGTGGACTCCAA...CCCTGTTTTAAGTTCTCTCAAGAGTTTGCCAATGAAATGTAATCCAACTTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CCA 90 bp | TTCACTCTTCGCAGTGTGTATTTAAGTAAGCTATCAAGTCAAGCACATCTTCTAATCTTCTGTGTCCCATaGATTAGAGCCCATTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTLRSVYLSKLSSQAHLLIFCVP*IRAHSS Trigger: AGAGGAATGGGCTCTAATCCATGGGACACAGAAGAT...TAGAAGATGTGCTTGACTTGATAGCTTACTTAAATACACACTGCGAAGAGTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCCAAGCTTTTCACTCTTCGCAGTGTGTATTTAAGTAAGCTATCAAGTCAACACGGGAGTAGGCAATaGATCTTCCTCCTCTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSKLFTLRSVYLSKLSSQHGSRQ*IFLLYQ Trigger: TTGATAGAGGAGGAAGATCCATTGCCTACTCCCGTG...TTGACTTGATAGCTTACTTAAATACACACTGCGAAGAGTGAAAAGCTTGGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS GCA 90 bp | GCCGGCCAAACCGAAGGGCTCCAAGCTGGCCACGGCGGCGGCCTCTaGCAGGCGGTGGATGCGCTGGTGCTGCAGGAATGCGGCGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: AGQTEGLQAGHGGGL*QAVDALVLQECGAR Trigger: CCGGGCGCCGCATTCCTGCAGCACCAGCGCATCCACCGCCTGGCAGAGGCCGCCGCCGTGGCCAGCTTGGAGCCCTTCGGTTTGGCCGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS GCA 90 bp | CCGCCCCGAAGCCGCCGGCCACGCCCATGCCCACGCCCATACCCATaGCCATCATCCCCACCACTCCTCCGCACTCGCCGGCCAAACCGA | + |
|
Preference number: 5 (lower is better) Translates to: PPRSRRPRPCPRPYP*PSSPPLLRTRRPNR Trigger: TCGGTTTGGCCGGCGAGTGCGGAGGAGTGGTGGGGATGATGGGCATGGGTATGGGCGTGGGCATGGGCGTGGCCGGCGGCTTCGGGGCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS CCA 90 bp | GTGCTGCAGGAATGCGGCGCCCGGGCTAAAGCTCTCCCCGCAGTCTaGGCAGATGGTGGGCGCGTCCATGATACTGGCCATCAGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VLQECGARAKALPAV*ADGGRVHDTGHQAV Trigger: GACAGCCTGATGGCCAGTATCATGGACGCGCCCACCATCTGCCCAGACTGCGGGGAGAGCTTTAGCCCGGGCGCCGCATTCCTGCAGCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CAA 90 bp | GGGCAGGCTCCACCATTCATTGCCCTGGGCCTTTCTCTGAAAGGCTTACCACACTGCAGGCGCCGGTGCTaGAGCAGGTCGGCGCGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GQAPPFIALGLSLKGLPHCRRRC*SRSARQ Trigger: CTGGCGCGCCGACCTGCTCAAGCACCGGCGCCTGCA...GTGTGGTAAGCCTTTCAGAGAAAGGCCCAGGGCAATGAATGGTGGAGCCTGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CAA 90 bp | TGGGGTCAGGGCACACGCATGCAAATGAAGGCACCCCAACCTGTGAACTTGGCTCCCGAGTGCGTGCGCTaGTGCGTGAAGAGGTGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: WGQGTRMQMKAPQPVNLAPECVR*CVKRCE Trigger: CTCGCACCTCTTCACGCACAAGCGCACGCACTCGGG...AGCCAAGTTCACAGGTTGGGGTGCCTTCATTTGCATGCGTGTGCCCTGACCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS CCA 90 bp | GCCCAGGGAGAGGTGACGCCTCCAAGGAAGCACGGGAGTAGGCAATaGATCTTCCTCCTCTATCAAGCGGTTCTCCCCAGCGCTTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AQGEVTPPRKHGSRQ*IFLLYQAVLPSAFL Trigger: GAGGAAAGCGCTGGGGAGAACCGCTTGATAGAGGAGGAAGATCCATTGCCTACTCCCGTGCTTCCTTGGAGGCGTCACCTCTCCCTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS TCA 90 bp | TTCATCTTCCTCTCCCCGCGGACTCCGGGATATGCTGTCAGATTCTaGCAGTCCTGGGAACAGAGCCATGTCAGCCACACCAGGCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FIFLSPRTPGYAVRF*QSWEQSHVSHTRLV Trigger: GACCAGCCTGGTGTGGCTGACATGGCTCTGTTCCCAGGACTGTCAGAATCTGACAGCATATCCCGGAGTCCGCGGGGAGAGGAAGATGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CAA 90 bp | CCTCCAAACAGGGCAGTTCTTACGTATACAACCACACTCACAGAATCTGGTACTCGGCGCACGAACCCCTaGCCGCACTCCCCGCATGCG | + |
|
Preference number: 5 (lower is better) Translates to: PPNRAVLTYTTTLTESGTRRTNP*PHSPHA Trigger: CGCATGCGGGGAGTGCGGCAAGGGGTTCGTGCGCCG...AGTACCAGATTCTGTGAGTGTGGTTGTATACGTAAGAACTGCCCTGTTTGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056096.15 |
||
| CDS-3UTR CAA 90 bp | CCTGGGCCTTTCTCTGAAAGGCTTACCACACTCCTCCCCCAGACTTTCCCCAGTTCATCATCCTGTGGGTaGGAGTCCACTTCCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PGPFSERLTTLLPQTFPSSSSCG*ESTSCS Trigger: GGAGCAGGAAGTGGACTCCAACCCACAGGATGATGA...ACTGGGGAAAGTCTGGGGGAGGAGTGTGGTAAGCCTTTCAGAGAAAGGCCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGGAACTTAAGGGTAGGTAACCAAAATCTATACAAGTTATTTGACTCCAGCTGCAGGCGCCGGTGCTaGAGCAGGTCGGCGCGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GGNLRVGNQNLYKLFDSSCRRRC*SRSARQ Trigger: CTGGCGCGCCGACCTGCTCAAGCACCGGCGCCTGCA...GCTGGAGTCAAATAACTTGTATAGATTTTGGTTACCTACCCTTAAGTTCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGGAACTTAAGGGTAGGTAACCAAAATCTATACAAGTTATTTGACTCCAGCCCCGAGTGCGTGCGCTaGTGCGTGAAGAGGTGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GGNLRVGNQNLYKLFDSSPECVR*CVKRCE Trigger: CTCGCACCTCTTCACGCACAAGCGCACGCACTCGGG...GCTGGAGTCAAATAACTTGTATAGATTTTGGTTACCTACCCTTAAGTTCCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS-3UTR CAA 90 bp | TTCACTCTTCGCAGTGTGTATTTAAGTAAGCTATCAAGTCAAGCACATCTTCTATCATCATCCTGTGGGTaGGAGTCCACTTCCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FTLRSVYLSKLSSQAHLLSSSCG*ESTSCS Trigger: GGAGCAGGAAGTGGACTCCAACCCACAGGATGATGA...TAGAAGATGTGCTTGACTTGATAGCTTACTTAAATACACACTGCGAAGAGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS CCA 72 bp | CTCCGCACTCGCCGGCCAAACCGAAGGGCTCCAAGCTaGCCACGGCGGCGGCCTCTGCCAGGCGGTGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: LRTRRPNRRAPS*PRRRPLPGGGC Trigger: GCATCCACCGCCTGGCAGAGGCCGCCGCCGTGGCCAGCTTGGAGCCCTTCGGTTTGGCCGGCGAGTGCGGAG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS GCA 72 bp | AGCCGCCGGCCACGCCCATGCCCACGCCCATACCCATaGCCATCATCCCCACCACTCCTCCGCACTCGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SRRPRPCPRPYP*PSSPPLLRTRR Trigger: CCGGCGAGTGCGGAGGAGTGGTGGGGATGATGGGCATGGGTATGGGCGTGGGCATGGGCGTGGCCGGCGGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS GCA 72 bp | ACCGAAGGGCTCCAAGCTGGCCACGGCGGCGGCCTCTaGCAGGCGGTGGATGCGCTGGTGCTGCAGGAATGC | + |
|
Preference number: 6 (lower is better) Translates to: TEGLQAGHGGGL*QAVDALVLQEC Trigger: GCATTCCTGCAGCACCAGCGCATCCACCGCCTGGCAGAGGCCGCCGCCGTGGCCAGCTTGGAGCCCTTCGGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS TCA 72 bp | GGCTTGTCACCCCGGTGTCGACCGCCCAGGGAGAGGTaGCGCCTCCAAGGAAGCACGGGAGTAGGCAATGGA | + |
|
Preference number: 6 (lower is better) Translates to: GLSPRCRPPRER*RLQGSTGVGNG Trigger: TCCATTGCCTACTCCCGTGCTTCCTTGGAGGCGTCACCTCTCCCTGGGCGGTCGACACCGGGGTGACAAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS CCA 72 bp | CCATCAGGCTGTCTAGTTCCCCGAGGTCCATGGCCATaGGGTGATGGAGCCGGTGGAAGCGGCGGTGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSGCLVPRGPWP*GDGAGGSGGEQ Trigger: CTGCTCACCGCCGCTTCCACCGGCTCCATCACCCCATGGCCATGGACCTCGGGGAACTAGACAGCCTGATGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS CCA 72 bp | GAATGCGGCGCCCGGGCTAAAGCTCTCCCCGCAGTCTaGGCAGATGGTGGGCGCGTCCATGATACTGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: ECGARAKALPAV*ADGGRVHDTGH Trigger: ATGGCCAGTATCATGGACGCGCCCACCATCTGCCCAGACTGCGGGGAGAGCTTTAGCCCGGGCGCCGCATTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS CCA 72 bp | GAGGTGACGCCTCCAAGGAAGCACGGGAGTAGGCAATaGATCTTCCTCCTCTATCAAGCGGTTCTCCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: EVTPPRKHGSRQ*IFLLYQAVLPS Trigger: GCTGGGGAGAACCGCTTGATAGAGGAGGAAGATCCATTGCCTACTCCCGTGCTTCCTTGGAGGCGTCACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS CCA 72 bp | TTTCTTCCTCACTCAGCCGCCCCTCTGAACAGACAGTaGACGCTATGTCCCTCTCTCGTGAGTCCCCTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: FLPHSAAPLNRQ*TLCPSLVSPLL Trigger: TAAGAGGGGACTCACGAGAGAGGGACATAGCGTCCACTGTCTGTTCAGAGGGGCGGCTGAGTGAGGAAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS CAA 90 bp | ATGTCCCTCTCTCGTGAGTCCCCTCTTAGATCATCATCCTGTGGGTaGGAGTCCACTTCCTGCTCCAGGTGGCCTCTATCTTCTGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: MSLSRESPLRSSSCG*ESTSCSRWPLSSVS Trigger: GGACACAGAAGATAGAGGCCACCTGGAGCAGGAAGTGGACTCCAACCCACAGGATGATGATCTAAGAGGGGACTCACGAGAGAGGGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS CCA 72 bp | TTCCTGCTCCAGGTGGCCTCTATCTTCTGTGTCCCATaGATTAGAGCCCATTCCTCTTTCTTCTGGGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: FLLQVASIFCVP*IRAHSSFFWVP Trigger: GGGGACCCAGAAGAAAGAGGAATGGGCTCTAATCCATGGGACACAGAAGATAGAGGCCACCTGGAGCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
||
| CDS CAA 72 bp | TCTCGTGAGTCCCCTCTTAGATCATCATCCTGTGGGTaGGAGTCCACTTCCTGCTCCAGGTGGCCTCTATCT | + |
|
Preference number: 6 (lower is better) Translates to: SRESPLRSSSCG*ESTSCSRWPLS Trigger: AGATAGAGGCCACCTGGAGCAGGAAGTGGACTCCAACCCACAGGATGATGATCTAAGAGGGGACTCACGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056096.15 ENSMUST00000178372.2 |
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