Pregenerated sensors for ZFP691 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045268Ensembl transcript IDs: ENSMUST00000052715.10, ENSMUST00000106355.5, ENSMUST00000179290.8
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAGCTAGACAACTTTaGAGGACCTGTAGACAACGACACCGTCTCAGGCACTACCCCCAA | + |
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Preference number: 1 (lower is better) Translates to: VCVCVCVCVCEARQL*RTCRQRHRLRHYPQ Trigger: TTGGGGGTAGTGCCTGAGACGGTGTCGTTGTCTACAGGTCCTCCAAAGTTGTCTAGCTTCACACACACACACACACACACACACACACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACAAGAGCATGTCCTaGGCCCATCCCATTTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: TGYCRVCVCVCVCVCVCVHKSMS*AHPISP Trigger: GGGGGAAATGGGATGGGCTCAGGACATGCTCTTGTG...CACACACACACACACACACACACACACACACACACACACACGGCAGTAGCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGTAAGAAAACCAGGTAACAAGCATGGGAGGGTGAGGGTCCCTGGATTGTGGCTCCACCCATCAAGGTaGGCTCTATGCTCTCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: GVRKPGNKHGRVRVPGLWLHPSR*ALCSPS Trigger: TGAGGGAGAGCATAGAGCCCACCTTGATGGGTGGAG...CCACAATCCAGGGACCCTCACCCTCCCATGCTTGTTACCTGGTTTTCTTACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGGTAGGAACTCACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGCTCCACCCATCAAGGTaGGCTCTATGCTCTCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: AGRNSQATAVCVCVCVCVLHPSR*ALCSPS Trigger: TGAGGGAGAGCATAGAGCCCACCTTGATGGGTGGAG...CACACACACACACACACACACACACACGGCAGTAGCCTGTGAGTTCCTACCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGCCTGGGGACTGATGACTGATGACCCAGTCACAAGAGCATGTCCTGAGCCCTCAAGGTGGGCTCTATaGTCTCCCTCACTCTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: KAWGLMTDDPVTRACPEPSRWAL*SPSLSK Trigger: CTTGGAGAGTGAGGGAGAGCATAGAGCCCACCTTGA...GGGCTCAGGACATGCTCTTGTGACTGGGTCATCAGTCATCAGTCCCCAGGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGATGACCCAGTCACAAGAGCATGTCCTGAGCCCATCCCATTTCCCCCACAGTCAAGGTGGGCTCTATaGTCTCCCTCACTCTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: TDDPVTRACPEPIPFPPQSRWAL*SPSLSK Trigger: CTTGGAGAGTGAGGGAGAGCATAGAGCCCACCTTGA...CTGTGGGGGAAATGGGATGGGCTCAGGACATGCTCTTGTGACTGGGTCATCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGGTAGGAACTCACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTCAGGATTTCCTGACTaGAAAGGCAAGAAGGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: AGRNSQATAVCVCVCVCVSGFPD*KGKKGL Trigger: CAGCCCCTTCTTGCCTTTGCAGTCAGGAAATCCTGA...CACACACACACACACACACACACACACGGCAGTAGCCTGTGAGTTCCTACCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGATGACCCAGTCACAAGAGCATGTCCTGAGCCCATCCCATTTCCCCCACAGTCAGGATTTCCTGACTaGAAAGGCAAGAAGGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: TDDPVTRACPEPIPFPPQSGFPD*KGKKGL Trigger: CAGCCCCTTCTTGCCTTTGCAGTCAGGAAATCCTGA...CTGTGGGGGAAATGGGATGGGCTCAGGACATGCTCTTGTGACTGGGTCATCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| 3UTR-3UTR TCA 90 bp | ACTCACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCACAGCTGAGGAAATaGAGAGTGGGCACTCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: THRLLPCVCVCVCVCVCVPQLRK*RVGTLN Trigger: ATTCAGAGTGCCCACTCTTCATTTCCTCAGCTGTGG...CACACACACACACACACACACACACACACACACACACGGCAGTAGCCTGTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAAGCTAGACAACTTTaGAGGACCTGTAGACAACGA | + |
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Preference number: 2 (lower is better) Translates to: TGYCRVCVCVCVCVCVCVEARQL*RTCRQR Trigger: TCGTTGTCTACAGGTCCTCCAAAGTTGTCTAGCTTC...CACACACACACACACACACACACACACACACACACACACACGGCAGTAGCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| 3UTR TCA 72 bp | CCTCCCCAGCCTGAGGCTCTAGAGGCTGACACAGGATaGGGCACAGCAGGTAGGAACTCACAGGCTACTGCC | + |
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Preference number: 3 (lower is better) Translates to: PPQPEALEADTG*GTAGRNSQATA Trigger: GGCAGTAGCCTGTGAGTTCCTACCTGCTGTGCCTCATCCTGTGTCAGCCTCTAGAGCCTCAGGCTGGGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| 3UTR TCA 72 bp | GCATGGGAGGGTGAGGGTCCCTGGATTGTGGATCCCTaGGGCTTCCTTCTCAGACTGAAGAGGCCGGTCACC | + |
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Preference number: 3 (lower is better) Translates to: AWEGEGPWIVDP*GFLLRLKRPVT Trigger: GGTGACCGGCCTCTTCAGTCTGAGAAGGAAGCCTCAGGGATCCACAATCCAGGGACCCTCACCCTCCCATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| 3UTR CCA 72 bp | ACAGCAGGTACTAAAGGCCTCCTCCACCCATCAAGGTaGGCTCTATGCTCTCCCTCACTCTCCAAGCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: TAGTKGLLHPSR*ALCSPSLSKQA Trigger: GGCCTGCTTGGAGAGTGAGGGAGAGCATAGAGCCCACCTTGATGGGTGGAGGAGGCCTTTAGTACCTGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| 3UTR CCA 72 bp | TGTGTGTGTGTGTGTGTGTGTGAAGCTAGACAACTTTaGAGGACCTGTAGACAACGACACCGTCTCAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVCEARQL*RTCRQRHRLRH Trigger: GTGCCTGAGACGGTGTCGTTGTCTACAGGTCCTCCAAAGTTGTCTAGCTTCACACACACACACACACACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR TCA 90 bp | GGATCCCTGAGGCTTCCTTCTCAGACTGAAGAGGCCGGTCACCAGGAGGGCCATCTTGCTGGTGCGTGGTaGGGTCCGAGCGCCGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: GSLRLPSQTEEAGHQEGHLAGAW*GPSAAG Trigger: TCCGGCGGCGCTCGGACCTCACCACGCACCAGCAAG...ATGGCCCTCCTGGTGACCGGCCTCTTCAGTCTGAGAAGGAAGCCTCAGGGATCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR TCA 90 bp | ACACAGGATGAGGCACAGCAGGTAGGAACTCACAGGCTACTGCCGTGTGTGTGTCTTGCTGGTGCGTGGTaGGGTCCGAGCGCCGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: TQDEAQQVGTHRLLPCVCLAGAW*GPSAAG Trigger: TCCGGCGGCGCTCGGACCTCACCACGCACCAGCAAG...ACACACACACGGCAGTAGCCTGTGAGTTCCTACCTGCTGTGCCTCATCCTGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR TCA 90 bp | CTGATGACCCAGTCACAAGAGCATGTCCTGAGCCCATCCCATTTCCCCCACAGCGGCCGCTGGCCCAGGTaGTCTTGCTGGTGCGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: LMTQSQEHVLSPSHFPHSGRWPR*SCWCVV Trigger: CACCACGCACCAGCAAGATCACCTGGGCCAGCGGCC...GCTGTGGGGGAAATGGGATGGGCTCAGGACATGCTCTTGTGACTGGGTCATCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CCA 90 bp | GGATCCCTGAGGCTTCCTTCTCAGACTGAAGAGGCCGGTCACCAGGAGGGCCATCCCGTGTGGGTACGGTaGTGCACCCCAAAGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: GSLRLPSQTEEAGHQEGHPVWVR*CTPKLE Trigger: CTCCAGCTTTGGGGTGCACCACCGTACCCACACGGG...ATGGCCCTCCTGGTGACCGGCCTCTTCAGTCTGAGAAGGAAGCCTCAGGGATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR TCA 90 bp | TCACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTGCTGGTGCGTGGTaGGGTCCGAGCGCCGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: SQATAVCVCVCVCVCVCVLAGAW*GPSAAG Trigger: TCCGGCGGCGCTCGGACCTCACCACGCACCAGCAAG...CACACACACACACACACACACACACACACACACACACACGGCAGTAGCCTGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR TCA 90 bp | GCAGGTAGGAACTCACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGGGCCGCTGGCCCAGGTaGTCTTGCTGGTGCGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: AGRNSQATAVCVCVCVCVGRWPR*SCWCVV Trigger: CACCACGCACCAGCAAGATCACCTGGGCCAGCGGCC...CACACACACACACACACACACACACACGGCAGTAGCCTGTGAGTTCCTACCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR TCA 90 bp | GGGGTAAGAAAACCAGGTAACAAGCATGGGAGGGTGAGGGTCCCTGGATTGTGGGGCCGCTGGCCCAGGTaGTCTTGCTGGTGCGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: GVRKPGNKHGRVRVPGLWGRWPR*SCWCVV Trigger: CACCACGCACCAGCAAGATCACCTGGGCCAGCGGCC...CCACAATCCAGGGACCCTCACCCTCCCATGCTTGTTACCTGGTTTTCTTACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR GCA 90 bp | CTGATGACCCAGTCACAAGAGCATGTCCTGAGCCCATCCCATTTCCCCCACAGCCGTTCCGTGGAGCCCTaGCAACAGGCTCTCCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: LMTQSQEHVLSPSHFPHSRSVEP*QQALLP Trigger: GGGCAGGAGAGCCTGTTGGCAGGGCTCCACGGAACG...GCTGTGGGGGAAATGGGATGGGCTCAGGACATGCTCTTGTGACTGGGTCATCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CCA 90 bp | TGGAGGACCTGTAGACAACGACACCGTCTCAGGCACTACCCCCAAAGCCTGGGGCTGGGGCCTCCGGCTTaGGCAGTGACTTTCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: WRTCRQRHRLRHYPQSLGLGPPA*AVTFCL Trigger: AAGGCAGAAAGTCACTGCCCAAGCCGGAGGCCCCAG...CCCCAGGCTTTGGGGGTAGTGCCTGAGACGGTGTCGTTGTCTACAGGTCCTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR GCA 90 bp | ACACAGGATGAGGCACAGCAGGTAGGAACTCACAGGCTACTGCCGTGTGTGTGTCGTTCCGTGGAGCCCTaGCAACAGGCTCTCCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: TQDEAQQVGTHRLLPCVCRSVEP*QQALLP Trigger: GGGCAGGAGAGCCTGTTGGCAGGGCTCCACGGAACG...ACACACACACGGCAGTAGCCTGTGAGTTCCTACCTGCTGTGCCTCATCCTGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR GCA 90 bp | TCAGCCCCTTCTCAGGATTTCCTGACTGCAAAGGCAAGAAGGGGCTGTTCCGCACGTTCCGTGGAGCCCTaGCAACAGGCTCTCCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SAPSQDFLTAKARRGCSARSVEP*QQALLP Trigger: GGGCAGGAGAGCCTGTTGGCAGGGCTCCACGGAACG...TGCGGAACAGCCCCTTCTTGCCTTTGCAGTCAGGAAATCCTGAGAAGGGGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR GCA 90 bp | TCAGCCCCTTCTCAGGATTTCCTGACTGCAAAGGCAAGAAGGGGCTGTTCCGCATGCGCTCGTGCCGGATaGGGTTGGAGCTCCGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SAPSQDFLTAKARRGCSACARAG*GWSSGR Trigger: TCTCCCGGAGCTCCAACCGCATCCGGCACGAGCGCA...TGCGGAACAGCCCCTTCTTGCCTTTGCAGTCAGGAAATCCTGAGAAGGGGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR GCA 90 bp | GTCGGGGTAAGAAAACCAGGTAACAAGCATGGGAGGGTGAGGGTCCCTGGATTGTGCGCTCGTGCCGGATaGGGTTGGAGCTCCGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: VGVRKPGNKHGRVRVPGLCARAG*GWSSGR Trigger: TCTCCCGGAGCTCCAACCGCATCCGGCACGAGCGCA...CAATCCAGGGACCCTCACCCTCCCATGCTTGTTACCTGGTTTTCTTACCCCGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CCA 90 bp | CCACCCATCAAGGTGGGCTCTATGCTCTCCCTCACTCTCCAAGCAGGCCTCTCCCTGCCTTGTCTTTGGTaGATGCGTTCCGTGGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: PPIKVGSMLSLTLQAGLSLPCLW*MRSVEP Trigger: GGGCTCCACGGAACGCATCCACCAAAGACAAGGCAG...GGAGAGGCCTGCTTGGAGAGTGAGGGAGAGCATAGAGCCCACCTTGATGGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CCA 90 bp | TGGAGGACCTGTAGACAACGACACCGTCTCAGGCACTACCCCCAAAGCCTGGGGCTGCCTTGTCTTTGGTaGATGCGTTCCGTGGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: WRTCRQRHRLRHYPQSLGLPCLW*MRSVEP Trigger: GGGCTCCACGGAACGCATCCACCAAAGACAAGGCAG...CCCCAGGCTTTGGGGGTAGTGCCTGAGACGGTGTCGTTGTCTACAGGTCCTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CCA 90 bp | TTTGGAGGACCTGTAGACAACGACACCGTCTCAGGCACTACCCCCAAAGCCTGGCCCGTGTGGGTACGGTaGTGCACCCCAAAGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: FGGPVDNDTVSGTTPKAWPVWVR*CTPKLE Trigger: CTCCAGCTTTGGGGTGCACCACCGTACCCACACGGG...CCAGGCTTTGGGGGTAGTGCCTGAGACGGTGTCGTTGTCTACAGGTCCTCCAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR TCA 90 bp | CCACCCATCAAGGTGGGCTCTATGCTCTCCCTCACTCTCCAAGCAGGCCTCTCCCTCCGGCTTGGGCAGTaGCTTTCTGCCTTGTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: PPIKVGSMLSLTLQAGLSLRLGQ*LSALSL Trigger: CAAAGACAAGGCAGAAAGTCACTGCCCAAGCCGGAG...GGAGAGGCCTGCTTGGAGAGTGAGGGAGAGCATAGAGCCCACCTTGATGGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR TCA 90 bp | ACCCCCAAAGCCTGGGGACTGATGACTGATGACCCAGTCACAAGAGCATGTCCTTCCAGGTGGGTCCGGTaGTGTACAGCCAGCGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: TPKAWGLMTDDPVTRACPSRWVR*CTASVE Trigger: CTCCACGCTGGCTGTACATCACCGGACCCACCTGGA...AGGACATGCTCTTGTGACTGGGTCATCAGTCATCAGTCCCCAGGCTTTGGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR TCA 90 bp | AAAGCCTGGGGACTGATGACTGATGACCCAGTCACAAGAGCATGTCCTGAGCCCTCCAGGTGGGTCCGGTaGTGTACAGCCAGCGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: KAWGLMTDDPVTRACPEPSRWVR*CTASVE Trigger: CTCCACGCTGGCTGTACATCACCGGACCCACCTGGA...GGGCTCAGGACATGCTCTTGTGACTGGGTCATCAGTCATCAGTCCCCAGGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR TCA 90 bp | ACACAGGATGAGGCACAGCAGGTAGGAACTCACAGGCTACTGCCGTGTGTGTGTTCCAGGTGGGTCCGGTaGTGTACAGCCAGCGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: TQDEAQQVGTHRLLPCVCSRWVR*CTASVE Trigger: CTCCACGCTGGCTGTACATCACCGGACCCACCTGGA...ACACACACACGGCAGTAGCCTGTGAGTTCCTACCTGCTGTGCCTCATCCTGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CCA 90 bp | TCAGCCCCTTCTCAGGATTTCCTGACTGCAAAGGCAAGAAGGGGCTGTTCCGCAGCAGATGTAAGGGGCTaGCTCCAGGTGGGTCCGGTG | + |
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Preference number: 4 (lower is better) Translates to: SAPSQDFLTAKARRGCSAADVRG*LQVGPV Trigger: CACCGGACCCACCTGGAGCCAGCCCCTTACATCTGC...TGCGGAACAGCCCCTTCTTGCCTTTGCAGTCAGGAAATCCTGAGAAGGGGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CCA 90 bp | GCAGGTAGGAACTCACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGCCCGTGTGGGTACGGTaGTGCACCCCAAAGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: AGRNSQATAVCVCVCVCVPVWVR*CTPKLE Trigger: CTCCAGCTTTGGGGTGCACCACCGTACCCACACGGG...CACACACACACACACACACACACACACGGCAGTAGCCTGTGAGTTCCTACCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR TCA 90 bp | CCCAAAGCCTGGGGACTGATGACTGATGACCCAGTCACAAGAGCATGTCCTGAGAGGCTCTCCTGCCCATaGTCCTCCCGAGGTGTGATC | + |
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Preference number: 4 (lower is better) Translates to: PKAWGLMTDDPVTRACPERLSCP*SSRGVI Trigger: GATCACACCTCGGGAGGATCATGGGCAGGAGAGCCT...CTCAGGACATGCTCTTGTGACTGGGTCATCAGTCATCAGTCCCCAGGCTTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR TCA 90 bp | CCAGTCACAAGAGCATGTCCTGAGCCCATCCCATTTCCCCCACAGCTGAGGAAAAGGCTCTCCTGCCCATaGTCCTCCCGAGGTGTGATC | + |
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Preference number: 4 (lower is better) Translates to: PVTRACPEPIPFPPQLRKRLSCP*SSRGVI Trigger: GATCACACCTCGGGAGGATCATGGGCAGGAGAGCCT...TTTCCTCAGCTGTGGGGGAAATGGGATGGGCTCAGGACATGCTCTTGTGACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR GCA 90 bp | AAAAACCTGCTGGGAAGAGGCAGGGTGTTTACTCAGCCCCTTCTCAGGATTTCCTGCGCTCGTGCCGGATaGGGTTGGAGCTCCGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: KNLLGRGRVFTQPLLRISCARAG*GWSSGR Trigger: TCTCCCGGAGCTCCAACCGCATCCGGCACGAGCGCA...GGAAATCCTGAGAAGGGGCTGAGTAAACACCCTGCCTCTTCCCAGCAGGTTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR GCA 90 bp | TCAGCCCCTTCTCAGGATTTCCTGACTGCAAAGGCAAGAAGGGGCTGTTCCGCATCTCTTCCAGGTGGATaGGCTCGTGCCGGATGCGGT | + |
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Preference number: 4 (lower is better) Translates to: SAPSQDFLTAKARRGCSASLPGG*ARAGCG Trigger: ACCGCATCCGGCACGAGCGCATCCACCTGGAAGAGA...TGCGGAACAGCCCCTTCTTGCCTTTGCAGTCAGGAAATCCTGAGAAGGGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR GCA 90 bp | TCAGCCCCTTCTCAGGATTTCCTGACTGCAAAGGCAAGAAGGGGCTGTTCCGCAGTGTGGGTACGGTGGTaGACCCCAAAGCTGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SAPSQDFLTAKARRGCSAVWVRW*TPKLEL Trigger: CAGCTCCAGCTTTGGGGTGCACCACCGTACCCACAC...TGCGGAACAGCCCCTTCTTGCCTTTGCAGTCAGGAAATCCTGAGAAGGGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR GCA 90 bp | CCCAAAGCCTGGGGACTGATGACTGATGACCCAGTCACAAGAGCATGTCCTGAGGTGTGGGTACGGTGGTaGACCCCAAAGCTGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PKAWGLMTDDPVTRACPEVWVRW*TPKLEL Trigger: CAGCTCCAGCTTTGGGGTGCACCACCGTACCCACAC...CTCAGGACATGCTCTTGTGACTGGGTCATCAGTCATCAGTCCCCAGGCTTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCCAAAGCCTGGGGACTGATGACTGATGACCCAGTCACAAGAGCATGTCCTGTGTGGGTACGGTGGTaGACCCCAAAGCTGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPKAWGLMTDDPVTRACPVWVRW*TPKLEL Trigger: CAGCTCCAGCTTTGGGGTGCACCACCGTACCCACAC...AGGACATGCTCTTGTGACTGGGTCATCAGTCATCAGTCCCCAGGCTTTGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR CCA 90 bp | CTGATGACCCAGTCACAAGAGCATGTCCTGAGCCCATCCCATTTCCCCCACAGCCTGCCTTGTCTTTGGTaGATGCGTTCCGTGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LMTQSQEHVLSPSHFPHSLPCLW*MRSVEP Trigger: GGGCTCCACGGAACGCATCCACCAAAGACAAGGCAG...GCTGTGGGGGAAATGGGATGGGCTCAGGACATGCTCTTGTGACTGGGTCATCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTCACAAGAGCATGTCCTGAGCCCATCCCATTTCCCCCACAGCTGAGGAAACTGGGGCCTCCGGCTTaGGCAGTGACTTTCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PVTRACPEPIPFPPQLRKLGPPA*AVTFCL Trigger: AAGGCAGAAAGTCACTGCCCAAGCCGGAGGCCCCAG...TTTCCTCAGCTGTGGGGGAAATGGGATGGGCTCAGGACATGCTCTTGTGACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR CCA 90 bp | ACTCACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCAGATGTAAGGGGCTaGCTCCAGGTGGGTCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: THRLLPCVCVCVCVCVCVADVRG*LQVGPV Trigger: CACCGGACCCACCTGGAGCCAGCCCCTTACATCTGC...CACACACACACACACACACACACACACACACACACACGGCAGTAGCCTGTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR CCA 90 bp | TCACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCAGATGTAAGGGGCTaGCTCCAGGTGGGTCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SQATAVCVCVCVCVCVCVADVRG*LQVGPV Trigger: CACCGGACCCACCTGGAGCCAGCCCCTTACATCTGC...CACACACACACACACACACACACACACACACACACACACGGCAGTAGCCTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR CCA 90 bp | CCACCCATCAAGGTGGGCTCTATGCTCTCCCTCACTCTCCAAGCAGGCCTCTCCCCTCTGTGCGTTCTCTaGTGTGCACCAAAGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPIKVGSMLSLTLQAGLSPLCVL*CAPKLE Trigger: CTCCAACTTTGGTGCACACCAGAGAACGCACAGAGG...GGAGAGGCCTGCTTGGAGAGTGAGGGAGAGCATAGAGCCCACCTTGATGGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR TCA 90 bp | GGATCCCTGAGGCTTCCTTCTCAGACTGAAGAGGCCGGTCACCAGGAGGGCCATAGTTGGAGATATCACTaGAAGTCCGCCCGCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSLRLPSQTEEAGHQEGHSWRYH*KSARIQ Trigger: CTGAATGCGGGCGGACTTTCAGTGATATCTCCAACT...ATGGCCCTCCTGGTGACCGGCCTCTTCAGTCTGAGAAGGAAGCCTCAGGGATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGGACCTGTAGACAACGACACCGTCTCAGGCACTACCCCCAAAGCCTGGGGAGTTGGAGATATCACTaGAAGTCCGCCCGCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WRTCRQRHRLRHYPQSLGSWRYH*KSARIQ Trigger: CTGAATGCGGGCGGACTTTCAGTGATATCTCCAACT...CCCCAGGCTTTGGGGGTAGTGCCTGAGACGGTGTCGTTGTCTACAGGTCCTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR GCA 90 bp | TCACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTCTTCCAGGTGGATaGGCTCGTGCCGGATGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SQATAVCVCVCVCVCVCVSLPGG*ARAGCG Trigger: ACCGCATCCGGCACGAGCGCATCCACCTGGAAGAGA...CACACACACACACACACACACACACACACACACACACACGGCAGTAGCCTGTGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR GCA 90 bp | GTCGGGGTAAGAAAACCAGGTAACAAGCATGGGAGGGTGAGGGTCCCTGGATTGGTTTCCCACACAGGGTaGACCTGTACGGCTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VGVRKPGNKHGRVRVPGLVSHTG*TCTASP Trigger: GGGAGAAGCCGTACAGGTGCACCCTGTGTGGGAAAC...CAATCCAGGGACCCTCACCCTCCCATGCTTGTTACCTGGTTTTCTTACCCCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR GCA 90 bp | GGGGTAAGAAAACCAGGTAACAAGCATGGGAGGGTGAGGGTCCCTGGATTGTGGGTTTCCCACACAGGGTaGACCTGTACGGCTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GVRKPGNKHGRVRVPGLWVSHTG*TCTASP Trigger: GGGAGAAGCCGTACAGGTGCACCCTGTGTGGGAAAC...CCACAATCCAGGGACCCTCACCCTCCCATGCTTGTTACCTGGTTTTCTTACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR GCA 90 bp | CCCAAAGCCTGGGGACTGATGACTGATGACCCAGTCACAAGAGCATGTCCTGAGGTTTCCCACACAGGGTaGACCTGTACGGCTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PKAWGLMTDDPVTRACPEVSHTG*TCTASP Trigger: GGGAGAAGCCGTACAGGTGCACCCTGTGTGGGAAAC...CTCAGGACATGCTCTTGTGACTGGGTCATCAGTCATCAGTCCCCAGGCTTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCCTGGGGACTGATGACTGATGACCCAGTCACAAGAGCATGTCCTGAGCCCCCAGTGTGGATCCGCTaGTGCGTTCTCAGGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KAWGLMTDDPVTRACPEPPVWIR*CVLRLE Trigger: CTCCAACCTGAGAACGCACCAGCGGATCCACACTGG...GGGCTCAGGACATGCTCTTGTGACTGGGTCATCAGTCATCAGTCCCCAGGCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR CCA 90 bp | GGGGTAAGAAAACCAGGTAACAAGCATGGGAGGGTGAGGGTCCCTGGATTGTGGCCAGTGTGGATCCGCTaGTGCGTTCTCAGGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GVRKPGNKHGRVRVPGLWPVWIR*CVLRLE Trigger: CTCCAACCTGAGAACGCACCAGCGGATCCACACTGG...CCACAATCCAGGGACCCTCACCCTCCCATGCTTGTTACCTGGTTTTCTTACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR CCA 90 bp | ACACAGGATGAGGCACAGCAGGTAGGAACTCACAGGCTACTGCCGTGTGTGTGTTGCTTCTCTTCCAGGTaGATGCGCTCGTGCCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TQDEAQQVGTHRLLPCVCCFSSR*MRSCRM Trigger: CATCCGGCACGAGCGCATCCACCTGGAAGAGAAGCA...ACACACACACGGCAGTAGCCTGTGAGTTCCTACCTGCTGTGCCTCATCCTGTGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR TCA 90 bp | AGGCAGGGTGTTTACTCAGCCCCTTCTCAGGATTTCCTGACTGCAAAGGCAAGAAGGCTCTCCTGCCCATaGTCCTCCCGAGGTGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: RQGVYSAPSQDFLTAKARRLSCP*SSRGVI Trigger: GATCACACCTCGGGAGGATCATGGGCAGGAGAGCCT...TCTTGCCTTTGCAGTCAGGAAATCCTGAGAAGGGGCTGAGTAAACACCCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR TCA 90 bp | CCAGTCACAAGAGCATGTCCTGAGCCCATCCCATTTCCCCCACAGCTGAGGAAACTCCGGCTTGGGCAGTaGCTTTCTGCCTTGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PVTRACPEPIPFPPQLRKLRLGQ*LSALSL Trigger: CAAAGACAAGGCAGAAAGTCACTGCCCAAGCCGGAG...TTTCCTCAGCTGTGGGGGAAATGGGATGGGCTCAGGACATGCTCTTGTGACTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR TCA 90 bp | TGGAGGACCTGTAGACAACGACACCGTCTCAGGCACTACCCCCAAAGCCTGGGGATCTGTCTCTGGGCTTaGAAAAAGCATGGGATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WRTCRQRHRLRHYPQSLGICLWA*KKHGIP Trigger: AGGGATCCCATGCTTTTTTCAAGCCCAGAGACAGAT...CCCCAGGCTTTGGGGGTAGTGCCTGAGACGGTGTCGTTGTCTACAGGTCCTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR TCA 90 bp | TCAGCCCCTTCTCAGGATTTCCTGACTGCAAAGGCAAGAAGGGGCTGTTCCGCATTTTCTGGTGTCGGATaGGGTTGGAGCTCCGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SAPSQDFLTAKARRGCSAFSGVG*GWSSGR Trigger: TCTCCCGGAGCTCCAACCTCATCCGACACCAGAAAA...TGCGGAACAGCCCCTTCTTGCCTTTGCAGTCAGGAAATCCTGAGAAGGGGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR GCA 90 bp | AAAGCCTGGGGACTGATGACTGATGACCCAGTCACAAGAGCATGTCCTGAGCCCGTGTGGATCCGCTGGTaGGTTCTCAGGTTGGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KAWGLMTDDPVTRACPEPVWIRW*VLRLEV Trigger: TACCTCCAACCTGAGAACGCACCAGCGGATCCACAC...GGGCTCAGGACATGCTCTTGTGACTGGGTCATCAGTCATCAGTCCCCAGGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAGGGTGTTTACTCAGCCCCTTCTCAGGATTTCCTGACTGCAAAGGCAAGATCTCTTCCAGGTGGATaGGCTCGTGCCGGATGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RQGVYSAPSQDFLTAKARSLPGG*ARAGCG Trigger: ACCGCATCCGGCACGAGCGCATCCACCTGGAAGAGA...TCTTGCCTTTGCAGTCAGGAAATCCTGAGAAGGGGCTGAGTAAACACCCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACCTGCTGGGAAGAGGCAGGGTGTTTACTCAGCCCCTTCTCAGGATTTCCCTGGGGCCTCCGGCTTaGGCAGTGACTTTCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KNLLGRGRVFTQPLLRISLGPPA*AVTFCL Trigger: AAGGCAGAAAGTCACTGCCCAAGCCGGAGGCCCCAG...GGAAATCCTGAGAAGGGGCTGAGTAAACACCCTGCCTCTTCCCAGCAGGTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR CCA 90 bp | TCACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTCTCTTCCAGGTaGATGCGCTCGTGCCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SQATAVCVCVCVCVCVCVCFSSR*MRSCRM Trigger: CATCCGGCACGAGCGCATCCACCTGGAAGAGAAGCA...CACACACACACACACACACACACACACACACACACACACGGCAGTAGCCTGTGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CCA 90 bp | CTGATGACCCAGTCACAAGAGCATGTCCTGAGCCCATCCCATTTCCCCCACAGCCCTCTGTGCGTTCTCTaGTGTGCACCAAAGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LMTQSQEHVLSPSHFPHSPLCVL*CAPKLE Trigger: CTCCAACTTTGGTGCACACCAGAGAACGCACAGAGG...GCTGTGGGGGAAATGGGATGGGCTCAGGACATGCTCTTGTGACTGGGTCATCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR TCA 90 bp | GTCGGGGTAAGAAAACCAGGTAACAAGCATGGGAGGGTGAGGGTCCCTGGATTGGCGTGGAGCTCTGAGTaGAGCTCTTGCCACAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: VGVRKPGNKHGRVRVPGLAWSSE*SSCHKC Trigger: ACATTTGTGGCAAGAGCTTCACTCAGAGCTCCACGC...CAATCCAGGGACCCTCACCCTCCCATGCTTGTTACCTGGTTTTCTTACCCCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR TCA 90 bp | TCAGCCCCTTCTCAGGATTTCCTGACTGCAAAGGCAAGAAGGGGCTGTTCCGCAGCGTGGAGCTCTGAGTaGAGCTCTTGCCACAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: SAPSQDFLTAKARRGCSAAWSSE*SSCHKC Trigger: ACATTTGTGGCAAGAGCTTCACTCAGAGCTCCACGC...TGCGGAACAGCCCCTTCTTGCCTTTGCAGTCAGGAAATCCTGAGAAGGGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR TCA 90 bp | TCACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGGTGTCGGATaGGGTTGGAGCTCCGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQATAVCVCVCVCVCVCVFSGVG*GWSSGR Trigger: TCTCCCGGAGCTCCAACCTCATCCGACACCAGAAAA...CACACACACACACACACACACACACACACACACACACACGGCAGTAGCCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR TCA 90 bp | ACTCACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCTGGTGTCGGATaGGGTTGGAGCTCCGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: THRLLPCVCVCVCVCVCVFSGVG*GWSSGR Trigger: TCTCCCGGAGCTCCAACCTCATCCGACACCAGAAAA...CACACACACACACACACACACACACACACACACACACGGCAGTAGCCTGTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGTGGATCCGCTGGTaGGTTCTCAGGTTGGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TGYCRVCVCVCVCVCVCVVWIRW*VLRLEV Trigger: TACCTCCAACCTGAGAACGCACCAGCGGATCCACAC...CACACACACACACACACACACACACACACACACACACACACGGCAGTAGCCTGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACCTGCTGGGAAGAGGCAGGGTGTTTACTCAGCCCCTTCTCAGGATTTCCCCAGTGTGGATCCGCTaGTGCGTTCTCAGGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KNLLGRGRVFTQPLLRISPVWIR*CVLRLE Trigger: CTCCAACCTGAGAACGCACCAGCGGATCCACACTGG...GGAAATCCTGAGAAGGGGCTGAGTAAACACCCTGCCTCTTCCCAGCAGGTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR CCA 90 bp | AAAAACCTGCTGGGAAGAGGCAGGGTGTTTACTCAGCCCCTTCTCAGGATTTCCTGCTTCTCTTCCAGGTaGATGCGCTCGTGCCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KNLLGRGRVFTQPLLRISCFSSR*MRSCRM Trigger: CATCCGGCACGAGCGCATCCACCTGGAAGAGAAGCA...GGAAATCCTGAGAAGGGGCTGAGTAAACACCCTGCCTCTTCCCAGCAGGTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCCAAAGCCTGGGGACTGATGACTGATGACCCAGTCACAAGAGCATGTCCTCCTCTGTGCGTTCTCTaGTGTGCACCAAAGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TPKAWGLMTDDPVTRACPPLCVL*CAPKLE Trigger: CTCCAACTTTGGTGCACACCAGAGAACGCACAGAGG...AGGACATGCTCTTGTGACTGGGTCATCAGTCATCAGTCCCCAGGCTTTGGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGAGGACCTGTAGACAACGACACCGTCTCAGGCACTACCCCCAAAGCCTGGCCCAAGTGTGTTTTCTaGTGTCGGATGAGGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FGGPVDNDTVSGTTPKAWPKCVF*CRMRLE Trigger: CTCCAACCTCATCCGACACCAGAAAACACACTTGGG...CCAGGCTTTGGGGGTAGTGCCTGAGACGGTGTCGTTGTCTACAGGTCCTCCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR TCA 90 bp | GGGGTAAGAAAACCAGGTAACAAGCATGGGAGGGTGAGGGTCCCTGGATTGTGGGGTTGGAGGTATTGTTaGAGGTTTTGCCACACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: GVRKPGNKHGRVRVPGLWGWRYC*RFCHTA Trigger: CGCAGTGTGGCAAAACCTTCAACAATACCTCCAACC...CCACAATCCAGGGACCCTCACCCTCCCATGCTTGTTACCTGGTTTTCTTACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR TCA 90 bp | CCCAAAGCCTGGGGACTGATGACTGATGACCCAGTCACAAGAGCATGTCCTGAGGGTTGGAGGTATTGTTaGAGGTTTTGCCACACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PKAWGLMTDDPVTRACPEGWRYC*RFCHTA Trigger: CGCAGTGTGGCAAAACCTTCAACAATACCTCCAACC...CTCAGGACATGCTCTTGTGACTGGGTCATCAGTCATCAGTCCCCAGGCTTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR TCA 90 bp | GTCGGGGTAAGAAAACCAGGTAACAAGCATGGGAGGGTGAGGGTCCCTGGATTGAGTTGGAGATATCACTaGAAGTCCGCCCGCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGVRKPGNKHGRVRVPGLSWRYH*KSARIQ Trigger: CTGAATGCGGGCGGACTTTCAGTGATATCTCCAACT...CAATCCAGGGACCCTCACCCTCCCATGCTTGTTACCTGGTTTTCTTACCCCGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR GCA 90 bp | GGGGTAAGAAAACCAGGTAACAAGCATGGGAGGGTGAGGGTCCCTGGATTGTGGTGGGCAGTGACTTTCTaGCTTGTCTTTGGTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GVRKPGNKHGRVRVPGLWWAVTF*LVFGGC Trigger: GCATCCACCAAAGACAAGGCAGAAAGTCACTGCCCA...CCACAATCCAGGGACCCTCACCCTCCCATGCTTGTTACCTGGTTTTCTTACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCCAAAGCCTGGGGACTGATGACTGATGACCCAGTCACAAGAGCATGTCCTTGGGCAGTGACTTTCTaGCTTGTCTTTGGTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TPKAWGLMTDDPVTRACPWAVTF*LVFGGC Trigger: GCATCCACCAAAGACAAGGCAGAAAGTCACTGCCCA...AGGACATGCTCTTGTGACTGGGTCATCAGTCATCAGTCCCCAGGCTTTGGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR GCA 90 bp | CCCATTTCCCCCACAGCTGAGGAAATGAAGAGTGGGCACTCTGAATTTCCAAGGGTGTGGATCCGCTGGTaGGTTCTCAGGTTGGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PISPTAEEMKSGHSEFPRVWIRW*VLRLEV Trigger: TACCTCCAACCTGAGAACGCACCAGCGGATCCACAC...CCTTGGAAATTCAGAGTGCCCACTCTTCATTTCCTCAGCTGTGGGGGAAATGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR GCA 90 bp | CCACCCATCAAGGTGGGCTCTATGCTCTCCCTCACTCTCCAAGCAGGCCTCTCCAAATCCTTCTCATCTTaGTCGCCCAAGTGTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PPIKVGSMLSLTLQAGLSKSFSS*SPKCVF Trigger: GAAAACACACTTGGGCGAGCAAGATGAGAAGGATTT...GGAGAGGCCTGCTTGGAGAGTGAGGGAGAGCATAGAGCCCACCTTGATGGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCCTGGGGACTGATGACTGATGACCCAGTCACAAGAGCATGTCCTGAGCCCTTTCTGCCTTGTCTTTaGTGGATGCGTTCCGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KAWGLMTDDPVTRACPEPFLPCL*WMRSVE Trigger: CTCCACGGAACGCATCCACCAAAGACAAGGCAGAAA...GGGCTCAGGACATGCTCTTGTGACTGGGTCATCAGTCATCAGTCCCCAGGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CCA 90 bp | ACTGATGACCCAGTCACAAGAGCATGTCCTGAGCCCATCCCATTTCCCCCACAGTTTCTGCCTTGTCTTTaGTGGATGCGTTCCGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: TDDPVTRACPEPIPFPPQFLPCL*WMRSVE Trigger: CTCCACGGAACGCATCCACCAAAGACAAGGCAGAAA...CTGTGGGGGAAATGGGATGGGCTCAGGACATGCTCTTGTGACTGGGTCATCAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR TCA 90 bp | CCCAAAGCCTGGGGACTGATGACTGATGACCCAGTCACAAGAGCATGTCCTGAGATCTGTCTCTGGGCTTaGAAAAAGCATGGGATCCCT | + |
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Preference number: 4 (lower is better) Translates to: PKAWGLMTDDPVTRACPEICLWA*KKHGIP Trigger: AGGGATCCCATGCTTTTTTCAAGCCCAGAGACAGAT...CTCAGGACATGCTCTTGTGACTGGGTCATCAGTCATCAGTCCCCAGGCTTTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR TCA 90 bp | TCACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTTGGAGGTATTGTTaGAGGTTTTGCCACACTGCG | + |
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Preference number: 4 (lower is better) Translates to: SQATAVCVCVCVCVCVCVGWRYC*RFCHTA Trigger: CGCAGTGTGGCAAAACCTTCAACAATACCTCCAACC...CACACACACACACACACACACACACACACACACACACACGGCAGTAGCCTGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR GCA 90 bp | ACCCCCAAAGCCTGGGGACTGATGACTGATGACCCAGTCACAAGAGCATGTCCTGTGCGTTCTCTGGTGTaGACCAAAGTTGGAGATATC | + |
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Preference number: 4 (lower is better) Translates to: TPKAWGLMTDDPVTRACPVRSLV*TKVGDI Trigger: GATATCTCCAACTTTGGTGCACACCAGAGAACGCAC...AGGACATGCTCTTGTGACTGGGTCATCAGTCATCAGTCCCCAGGCTTTGGGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CCA 90 bp | CCCATTTCCCCCACAGCTGAGGAAATGAAGAGTGGGCACTCTGAATTTCCAAGGCCCAAGTGTGTTTTCTaGTGTCGGATGAGGTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: PISPTAEEMKSGHSEFPRPKCVF*CRMRLE Trigger: CTCCAACCTCATCCGACACCAGAAAACACACTTGGG...CCTTGGAAATTCAGAGTGCCCACTCTTCATTTCCTCAGCTGTGGGGGAAATGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CCA 90 bp | AAAAACCTGCTGGGAAGAGGCAGGGTGTTTACTCAGCCCCTTCTCAGGATTTCCCCCAAGTGTGTTTTCTaGTGTCGGATGAGGTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: KNLLGRGRVFTQPLLRISPKCVF*CRMRLE Trigger: CTCCAACCTCATCCGACACCAGAAAACACACTTGGG...GGAAATCCTGAGAAGGGGCTGAGTAAACACCCTGCCTCTTCCCAGCAGGTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR TCA 90 bp | AGGCAGGGTGTTTACTCAGCCCCTTCTCAGGATTTCCTGACTGCAAAGGCAAGAATCTGTCTCTGGGCTTaGAAAAAGCATGGGATCCCT | + |
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Preference number: 4 (lower is better) Translates to: RQGVYSAPSQDFLTAKARICLWA*KKHGIP Trigger: AGGGATCCCATGCTTTTTTCAAGCCCAGAGACAGAT...TCTTGCCTTTGCAGTCAGGAAATCCTGAGAAGGGGCTGAGTAAACACCCTGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR GCA 90 bp | AAAAACCTGCTGGGAAGAGGCAGGGTGTTTACTCAGCCCCTTCTCAGGATTTCCGTGCGTTCTCTGGTGTaGACCAAAGTTGGAGATATC | + |
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Preference number: 4 (lower is better) Translates to: KNLLGRGRVFTQPLLRISVRSLV*TKVGDI Trigger: GATATCTCCAACTTTGGTGCACACCAGAGAACGCAC...GGAAATCCTGAGAAGGGGCTGAGTAAACACCCTGCCTCTTCCCAGCAGGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR GCA 90 bp | AGGCAGGGTGTTTACTCAGCCCCTTCTCAGGATTTCCTGACTGCAAAGGCAAGAGTGCGTTCTCTGGTGTaGACCAAAGTTGGAGATATC | + |
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Preference number: 4 (lower is better) Translates to: RQGVYSAPSQDFLTAKARVRSLV*TKVGDI Trigger: GATATCTCCAACTTTGGTGCACACCAGAGAACGCAC...TCTTGCCTTTGCAGTCAGGAAATCCTGAGAAGGGGCTGAGTAAACACCCTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR GCA 90 bp | CCAGTCACAAGAGCATGTCCTGAGCCCATCCCATTTCCCCCACAGCTGAGGAAAAAATCCTTCTCATCTTaGTCGCCCAAGTGTGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: PVTRACPEPIPFPPQLRKKSFSS*SPKCVF Trigger: GAAAACACACTTGGGCGAGCAAGATGAGAAGGATTT...TTTCCTCAGCTGTGGGGGAAATGGGATGGGCTCAGGACATGCTCTTGTGACTGG 50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR GCA 90 bp | ACTGATGACCCAGTCACAAGAGCATGTCCTGAGCCCATCCCATTTCCCCCACAGAAGGTTTTGCCACACTaGGCACATATAAAAAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: TDDPVTRACPEPIPFPPQKVLPH*AHIKSF Trigger: GAAGCTTTTTATATGTGCGCAGTGTGGCAAAACCTT...CTGTGGGGGAAATGGGATGGGCTCAGGACATGCTCTTGTGACTGGGTCATCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR GCA 90 bp | GCAGGTAGGAACTCACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGAAGGTTTTGCCACACTaGGCACATATAAAAAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: AGRNSQATAVCVCVCVCVKVLPH*AHIKSF Trigger: GAAGCTTTTTATATGTGCGCAGTGTGGCAAAACCTT...CACACACACACACACACACACACACACGGCAGTAGCCTGTGAGTTCCTACCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR GCA 90 bp | ACTCACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAAATCCTTCTCATCTTaGTCGCCCAAGTGTGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: THRLLPCVCVCVCVCVCVKSFSS*SPKCVF Trigger: GAAAACACACTTGGGCGAGCAAGATGAGAAGGATTT...CACACACACACACACACACACACACACACACACACACGGCAGTAGCCTGTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CAA 90 bp | TTTGGAGGACCTGTAGACAACGACACCGTCTCAGGCACTACCCCCAAAGCCTGGCTGGCCCAGGTGATCTaGCTGGTGCGTGGTGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: FGGPVDNDTVSGTTPKAWLAQVI*LVRGEV Trigger: GACCTCACCACGCACCAGCAAGATCACCTGGGCCAG...CCAGGCTTTGGGGGTAGTGCCTGAGACGGTGTCGTTGTCTACAGGTCCTCCAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CAA 90 bp | GCAGGTAGGAACTCACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTCGTGCCGGATGCGGTaGGAGCTCCGGGAGAAACTC | + |
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Preference number: 5 (lower is better) Translates to: AGRNSQATAVCVCVCVCVSCRMR*ELREKL Trigger: GAGTTTCTCCCGGAGCTCCAACCGCATCCGGCACGA...CACACACACACACACACACACACACACGGCAGTAGCCTGTGAGTTCCTACCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CAA 90 bp | TCAGCCCCTTCTCAGGATTTCCTGACTGCAAAGGCAAGAAGGGGCTGTTCCGCATCGTGCCGGATGCGGTaGGAGCTCCGGGAGAAACTC | + |
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Preference number: 5 (lower is better) Translates to: SAPSQDFLTAKARRGCSASCRMR*ELREKL Trigger: GAGTTTCTCCCGGAGCTCCAACCGCATCCGGCACGA...TGCGGAACAGCCCCTTCTTGCCTTTGCAGTCAGGAAATCCTGAGAAGGGGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CAA 90 bp | GCAGGTAGGAACTCACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGGCCCAGGTGATCTaGCTGGTGCGTGGTGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: AGRNSQATAVCVCVCVCVLAQVI*LVRGEV Trigger: GACCTCACCACGCACCAGCAAGATCACCTGGGCCAG...CACACACACACACACACACACACACACGGCAGTAGCCTGTGAGTTCCTACCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CAA 90 bp | CCACCCATCAAGGTGGGCTCTATGCTCTCCCTCACTCTCCAAGCAGGCCTCTCCCTTTCTGCCTTGTCTTaGGTGGATGCGTTCCGTGGA | + |
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Preference number: 5 (lower is better) Translates to: PPIKVGSMLSLTLQAGLSLSALS*VDAFRG Trigger: TCCACGGAACGCATCCACCAAAGACAAGGCAGAAAG...GGAGAGGCCTGCTTGGAGAGTGAGGGAGAGCATAGAGCCCACCTTGATGGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CAA 90 bp | CTGAGGCTTCCTTCTCAGACTGAAGAGGCCGGTCACCAGGAGGGCCATGCCCCCAGGTTGGAGGTATTGTaGAAGGTTTTGCCACACTGC | + |
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Preference number: 5 (lower is better) Translates to: LRLPSQTEEAGHQEGHAPRLEVL*KVLPHC Trigger: GCAGTGTGGCAAAACCTTCAACAATACCTCCAACCT...GGGGGCATGGCCCTCCTGGTGACCGGCCTCTTCAGTCTGAGAAGGAAGCCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CAA 90 bp | GGATCCCTGAGGCTTCCTTCTCAGACTGAAGAGGCCGGTCACCAGGAGGGCCATCTGACACTTGGCGCATaGGTAGTGCTTCTCTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: GSLRLPSQTEEAGHQEGHLTLGA*VVLLFQ Trigger: CTGGAAGAGAAGCACTACCAATGCGCCAAGTGTCAG...ATGGCCCTCCTGGTGACCGGCCTCTTCAGTCTGAGAAGGAAGCCTCAGGGATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CAA 90 bp | ACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGGCCCAGGTGATCTaGCTGGTGCGTGGTGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: TGYCRVCVCVCVCVCVCVLAQVI*LVRGEV Trigger: GACCTCACCACGCACCAGCAAGATCACCTGGGCCAG...CACACACACACACACACACACACACACACACACACACACACGGCAGTAGCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS TCA 90 bp | GCTCTCCTGCCCATGATCCTCCCGAGGTGTGATCTGAGAATCCTTTaGGCCATCCACTCTCCAAGGTTTAGCCCCTTCTCCTTCCTCGGG | + |
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Preference number: 5 (lower is better) Translates to: ALLPMILPRCDLRIL*AIHSPRFSPFSFLG Trigger: CCCGAGGAAGGAGAAGGGGCTAAACCTTGGAGAGTGGATGGCTCAAAGGATTCTCAGATCACACCTCGGGAGGATCATGGGCAGGAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CAA 90 bp | AGGCAGGGTGTTTACTCAGCCCCTTCTCAGGATTTCCTGACTGCAAAGGCAAGATCGTGCCGGATGCGGTaGGAGCTCCGGGAGAAACTC | + |
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Preference number: 5 (lower is better) Translates to: RQGVYSAPSQDFLTAKARSCRMR*ELREKL Trigger: GAGTTTCTCCCGGAGCTCCAACCGCATCCGGCACGA...TCTTGCCTTTGCAGTCAGGAAATCCTGAGAAGGGGCTGAGTAAACACCCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CAA 90 bp | GTCGGGGTAAGAAAACCAGGTAACAAGCATGGGAGGGTGAGGGTCCCTGGATTGCTGACACTTGGCGCATaGGTAGTGCTTCTCTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: VGVRKPGNKHGRVRVPGLLTLGA*VVLLFQ Trigger: CTGGAAGAGAAGCACTACCAATGCGCCAAGTGTCAG...CAATCCAGGGACCCTCACCCTCCCATGCTTGTTACCTGGTTTTCTTACCCCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CAA 90 bp | ACTCACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTTCTGCCTTGTCTTaGGTGGATGCGTTCCGTGGA | + |
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Preference number: 5 (lower is better) Translates to: THRLLPCVCVCVCVCVCVLSALS*VDAFRG Trigger: TCCACGGAACGCATCCACCAAAGACAAGGCAGAAAG...CACACACACACACACACACACACACACACACACACACGGCAGTAGCCTGTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CAA 90 bp | TCACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTTCTGCCTTGTCTTaGGTGGATGCGTTCCGTGGA | + |
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Preference number: 5 (lower is better) Translates to: SQATAVCVCVCVCVCVCVLSALS*VDAFRG Trigger: TCCACGGAACGCATCCACCAAAGACAAGGCAGAAAG...CACACACACACACACACACACACACACACACACACACACGGCAGTAGCCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CAA 90 bp | ACTCACAGGCTACTGCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGACACTTGGCGCATaGGTAGTGCTTCTCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: THRLLPCVCVCVCVCVCVLTLGA*VVLLFQ Trigger: CTGGAAGAGAAGCACTACCAATGCGCCAAGTGTCAG...CACACACACACACACACACACACACACACACACACACGGCAGTAGCCTGTGAGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CAA 90 bp | GTCGGGGTAAGAAAACCAGGTAACAAGCATGGGAGGGTGAGGGTCCCTGGATTGAGGTTGGAGGTATTGTaGAAGGTTTTGCCACACTGC | + |
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Preference number: 5 (lower is better) Translates to: VGVRKPGNKHGRVRVPGLRLEVL*KVLPHC Trigger: GCAGTGTGGCAAAACCTTCAACAATACCTCCAACCT...CAATCCAGGGACCCTCACCCTCCCATGCTTGTTACCTGGTTTTCTTACCCCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CAA 90 bp | TTTGGAGGACCTGTAGACAACGACACCGTCTCAGGCACTACCCCCAAAGCCTGGTGGTGTGCACCAAAGTaGGAGATATCACTGAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: FGGPVDNDTVSGTTPKAWWCAPK*EISLKV Trigger: GACTTTCAGTGATATCTCCAACTTTGGTGCACACCA...CCAGGCTTTGGGGGTAGTGCCTGAGACGGTGTCGTTGTCTACAGGTCCTCCAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CAA 90 bp | ACACAGGATGAGGCACAGCAGGTAGGAACTCACAGGCTACTGCCGTGTGTGTGTTGGTGTGCACCAAAGTaGGAGATATCACTGAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: TQDEAQQVGTHRLLPCVCWCAPK*EISLKV Trigger: GACTTTCAGTGATATCTCCAACTTTGGTGCACACCA...ACACACACACGGCAGTAGCCTGTGAGTTCCTACCTGCTGTGCCTCATCCTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS-3UTR CAA 90 bp | CCAGTCACAAGAGCATGTCCTGAGCCCATCCCATTTCCCCCACAGCTGAGGAAATGGTGTGCACCAAAGTaGGAGATATCACTGAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PVTRACPEPIPFPPQLRKWCAPK*EISLKV Trigger: GACTTTCAGTGATATCTCCAACTTTGGTGCACACCA...TTTCCTCAGCTGTGGGGGAAATGGGATGGGCTCAGGACATGCTCTTGTGACTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS TCA 72 bp | AGGGCCGCTGGCCCAGGTGATCTTGCTGGTGCGTGGTaGGGTCCGAGCGCCGCCGGAAGCTCTCCTGACACT | + |
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Preference number: 6 (lower is better) Translates to: RAAGPGDLAGAW*GPSAAGSSPDT Trigger: AGTGTCAGGAGAGCTTCCGGCGGCGCTCGGACCTCACCACGCACCAGCAAGATCACCTGGGCCAGCGGCCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS GCA 72 bp | GCTTGGGCAGTGACTTTCTGCCTTGTCTTTGGTGGATaGGTTCCGTGGAGCCCTGCCAACAGGCTCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AWAVTFCLVFGG*VPWSPANRLSC Trigger: GCAGGAGAGCCTGTTGGCAGGGCTCCACGGAACGCATCCACCAAAGACAAGGCAGAAAGTCACTGCCCAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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| CDS CAA 72 bp | TGGATCCGCTGGTGCGTTCTCAGGTTGGAGGTATTGTaGAAGGTTTTGCCACACTGCGCACATATAAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: WIRWCVLRLEVL*KVLPHCAHIKS Trigger: GCTTTTTATATGTGCGCAGTGTGGCAAAACCTTCAACAATACCTCCAACCTGAGAACGCACCAGCGGATCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052715.10 ENSMUST00000106355.5 ENSMUST00000179290.8 |
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