Pregenerated sensors for ZFP689 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048921Ensembl transcript IDs: ENSMUST00000053392.11, ENSMUST00000106299.2
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCGCCTGGTAACTGTTTCAGACATGCTGTAGGGCACCCAGTGTTCTaGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: SPGNCFRHAVGHPVF*VRAVEQRARALGLL Trigger: GAGCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAAACAGTTACCAGGCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| 3UTR GCA 90 bp | TGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTaGTCCCATTCTGTAGGACCTCTGGCAGCTACTCCTGAGTTTTGC | + |
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Preference number: 1 (lower is better) Translates to: CSGFGLWSSGPGLWV*SHSVGPLAATPEFC Trigger: GCAAAACTCAGGAGTAGCTGCCAGAGGTCCTACAGAATGGGAGCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| 3UTR GCA 90 bp | ATGACCAGGGGCTGGAGAGATGGCTCAGTAGTTAAGGCCACTGTCTaGTCTTCCAGAGGACCTGGGATTCAATTCCCAGCACATGGTGGC | + |
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Preference number: 1 (lower is better) Translates to: MTRGWRDGSVVKATV*SSRGPGIQFPAHGG Trigger: GCCACCATGTGCTGGGAATTGAATCCCAGGTCCTCTGGAAGAGCAGACAGTGGCCTTAACTACTGAGCCATCTCTCCAGCCCCTGGTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR CCA 90 bp | CACTTGTGGGAACCAAGAGCCACTCTTCCAAGAATGACCAGGGGCTaGAGAGATGGCTCAGTAGTTAAGGCCACTGTCTGCTCTTCCAGA | + |
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Preference number: 1 (lower is better) Translates to: HLWEPRATLPRMTRG*RDGSVVKATVCSSR Trigger: TCTGGAAGAGCAGACAGTGGCCTTAACTACTGAGCCATCTCTCCAGCCCCTGGTCATTCTTGGAAGAGTGGCTCTTGGTTCCCACAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR TCA 90 bp | TGGCAGGAGTGTTGCAAATATGGAGCCAAACTCAGGCTTTCCCCATaGTACAGAAATAGAGGCAGAGCAGGGGAGGTTCTGCCTTCTATA | + |
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Preference number: 1 (lower is better) Translates to: WQECCKYGAKLRLSP*YRNRGRAGEVLPSI Trigger: TATAGAAGGCAGAACCTCCCCTGCTCTGCCTCTATTTCTGTATCATGGGGAAAGCCTGAGTTTGGCTCCATATTTGCAACACTCCTGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR TCA 90 bp | ACAGTTGACCAGAGCCCAGACTACCAATTACTCAGAAGGCTGAGGTaGATCACACATTCAACCTCTCTCTCTCTCTCTCTCTCTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: TVDQSPDYQLLRRLR*ITHSTSLSLSLSLS Trigger: AGAGAGAGAGAGAGAGAGAGAGAGAGAGGTTGAATGTGTGATTCACCTCAGCCTTCTGAGTAATTGGTAGTCTGGGCTCTGGTCAACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR TCA 90 bp | AAAGAACAGTTGACCAGAGCCCAGACTACCAATTACTCAGAAGGCTaGGGTGAATCACACATTCAACCTCTCTCTCTCTCTCTCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: KEQLTRAQTTNYSEG*GESHIQPLSLSLSL Trigger: GAGAGAGAGAGAGAGAGAGAGAGGTTGAATGTGTGATTCACCTCAGCCTTCTGAGTAATTGGTAGTCTGGGCTCTGGTCAACTGTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR GCA 90 bp | TTCCAGCTATTAGTCACCCGTAGCAAACTGAAGTCTACCTCCTGCTaGTTGGTACCAATCACCCCATTTCCTCTTAAACCTTTCAGTGTA | + |
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Preference number: 1 (lower is better) Translates to: FQLLVTRSKLKSTSC*LVPITPFPLKPFSV Trigger: TACACTGAAAGGTTTAAGAGGAAATGGGGTGATTGGTACCAAGCAGCAGGAGGTAGACTTCAGTTTGCTACGGGTGACTAATAGCTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR GCA 90 bp | TTTTTCCAGCTATTAGTCACCCGTAGCAAACTGAAGTCTACCTCCTaGTGCTTGGTACCAATCACCCCATTTCCTCTTAAACCTTTCAGT | + |
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Preference number: 1 (lower is better) Translates to: FFQLLVTRSKLKSTS*CLVPITPFPLKPFS Trigger: ACTGAAAGGTTTAAGAGGAAATGGGGTGATTGGTACCAAGCAGCAGGAGGTAGACTTCAGTTTGCTACGGGTGACTAATAGCTGGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR TCA 90 bp | ATTGGTGTATACAGCACATGGCATGATACTCTTTTTGTTTCTGTATaGTCCCTAAGAAGAGACAGATTTCACTTGTGGGAACCAAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: IGVYSTWHDTLFVSV*SLRRDRFHLWEPRA Trigger: GGCTCTTGGTTCCCACAAGTGAAATCTGTCTCTTCTTAGGGATCATACAGAAACAAAAAGAGTATCATGCCATGTGCTGTATACACCAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR-3UTR TCA 90 bp | ACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTGCTCTGGCAGCTACTCCTaGGTTTTGCACCCTTCCATA | + |
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Preference number: 2 (lower is better) Translates to: TQCSGFGLWSSGPGLWVCSGSYS*VLHPSI Trigger: TATGGAAGGGTGCAAAACTCAGGAGTAGCTGCCAGA...GCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACACTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| 3UTR-3UTR GCA 90 bp | AACTGTTTCAGACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCCAGGGCTCTGGGTCTaGTCCCATTCTGTAGGACCT | + |
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Preference number: 2 (lower is better) Translates to: NCFRHAVGHPVFWVRAVEPGLWV*SHSVGP Trigger: AGGTCCTACAGAATGGGAGCAGACCCAGAGCCCTGG...CTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAAACAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTTTCAGACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCATCTGGCAGCTACTCCTaGGTTTTGCACCCTTCCATA | + |
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Preference number: 2 (lower is better) Translates to: LFQTCCRAPSVLGSGCGASGSYS*VLHPSI Trigger: TATGGAAGGGTGCAAAACTCAGGAGTAGCTGCCAGA...TGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| 3UTR CAA 90 bp | AGATGCAGGAGGTTGACCCAGTTCAGCTGTTGGCAGAAGTCATATTaGATGTACCACGTCGGTACAGCTGCCCAAGGCAAGAAGGTAGTA | + |
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Preference number: 2 (lower is better) Translates to: RCRRLTQFSCWQKSY*MYHVGTAAQGKKVV Trigger: TACTACCTTCTTGCCTTGGGCAGCTGTACCGACGTGGTACATCAAATATGACTTCTGCCAACAGCTGAACTGGGTCAACCTCCTGCATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR-3UTR TCA 90 bp | TGTTTCAGACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCACCCTTCCATAAAGTaGCTTTCTGTCATCTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: CFRHAVGHPVFWVRAVEQHPSIK*LSVIFV Trigger: AACAAAGATGACAGAAAGTCACTTTATGGAAGGGTG...CTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| 3UTR-3UTR TCA 90 bp | AACTGTTTCAGACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCACCCTTCCATAAAGTaGCTTTCTGTCATCTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: NCFRHAVGHPVFWVRAVEHPSIK*LSVIFV Trigger: AACAAAGATGACAGAAAGTCACTTTATGGAAGGGTG...CTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAAACAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| 3UTR-3UTR CCA 90 bp | CATGCAGAACAGGCATGTATACATAATAAAGAAATCATCACCCCAAAGCAGCGTAGCGGGCCAGGGCTCTaGGTCTGCTCCCATTCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: HAEQACIHNKEIITPKQRSGPGL*VCSHSV Trigger: TACAGAATGGGAGCAGACCCAGAGCCCTGGCCCGCT...ACGCTGCTTTGGGGTGATGATTTCTTTATTATGTATACATGCCTGTTCTGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR CAA 90 bp | CAGCTATTAGTCACCCGTAGCAAACTGAAGTCTACCTCCTGCTGCTaGGTACCAATCACCCCATTTCCTCTTAAACCTTTCAGTGTACTG | + |
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Preference number: 2 (lower is better) Translates to: QLLVTRSKLKSTSCC*VPITPFPLKPFSVL Trigger: CAGTACACTGAAAGGTTTAAGAGGAAATGGGGTGATTGGTACCAAGCAGCAGGAGGTAGACTTCAGTTTGCTACGGGTGACTAATAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR-3UTR CCA 90 bp | CAGAGGACCTGGGATTCAATTCCCAGCACATGGTGGCTCACAACATTTGTAACTGGAGTGTTGCAAATATaGAGCCAAACTCAGGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: QRTWDSIPSTWWLTTFVTGVLQI*SQTQAF Trigger: GAAAGCCTGAGTTTGGCTCCATATTTGCAACACTCC...AGTTACAAATGTTGTGAGCCACCATGTGCTGGGAATTGAATCCCAGGTCCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR-3UTR CCA 90 bp | CCCAAAGCAGCGTGGCCTGGAGTAGTTAAGATTGGTGTATACAGCACATGGCATATTCCCAGCACATGGTaGCTCACAACATTTGTAACT | + |
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Preference number: 2 (lower is better) Translates to: PKAAWPGVVKIGVYSTWHIPSTW*LTTFVT Trigger: AGTTACAAATGTTGTGAGCCACCATGTGCTGGGAAT...ATGCCATGTGCTGTATACACCAATCTTAACTACTCCAGGCCACGCTGCTTTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR-3UTR CCA 90 bp | CACATGGTGGCTCACAACATTTGTAACTCAGTTCCAGGGGCTCTGATTCTCTCAAAGCTTACCCTAGACTaGGTTTACAAAGGAGAATGC | + |
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Preference number: 2 (lower is better) Translates to: HMVAHNICNSVPGALILSKLTLD*VYKGEC Trigger: GCATTCTCCTTTGTAAACCCAGTCTAGGGTAAGCTT...TGAGAGAATCAGAGCCCCTGGAACTGAGTTACAAATGTTGTGAGCCACCATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR-3UTR TCA 90 bp | AACATTTGTAACTCAGTTCCAGGGGCTCTGATTCTCTCATCTGTCCTCCTTTGGGGGCACAAAATAGACTaGTTAGGTTTTCTGAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: NICNSVPGALILSSVLLWGHKID*LGFLKS Trigger: GCTCTTCAGAAAACCTAATCAGTCTATTTTGTGCCC...CCAAAGGAGGACAGATGAGAGAATCAGAGCCCCTGGAACTGAGTTACAAATGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR-3UTR TCA 90 bp | CATGCAGAACAGGCATGTATACATAATAAAGAAATCATCACCCCAAAGCAGCGTAATTACTCAGAAGGCTaGGGTGAATCACACATTCAA | + |
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Preference number: 2 (lower is better) Translates to: HAEQACIHNKEIITPKQRNYSEG*GESHIQ Trigger: TTGAATGTGTGATTCACCTCAGCCTTCTGAGTAATT...ACGCTGCTTTGGGGTGATGATTTCTTTATTATGTATACATGCCTGTTCTGCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR CCA 72 bp | TCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTaGGTCTGCTCCCATTCTGTAGGACCTCTGGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: SGFGLWSSGPGL*VCSHSVGPLAA Trigger: AGCTGCCAGAGGTCCTACAGAATGGGAGCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| 3UTR GCA 72 bp | TTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTaGTCCCATTCTGTAGGACCTCTGGCAGCTACTCCT | + |
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Preference number: 3 (lower is better) Translates to: FGLWSSGPGLWV*SHSVGPLAATP Trigger: AGGAGTAGCTGCCAGAGGTCCTACAGAATGGGAGCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| 3UTR CCA 72 bp | AACTGTTTCAGACATGCTGTAGGGCACCCAGTGTTCTaGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: NCFRHAVGHPVF*VRAVEQRARAL Trigger: CAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAAACAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| 3UTR GCA 72 bp | GTTTGCCATCTGCCCCCACCCAGAGCTGAGGGCAGATaGTCCATAGAGAAGCAGATGCAGGAGGTTGACCCA | + |
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Preference number: 3 (lower is better) Translates to: VCHLPPPRAEGR*SIEKQMQEVDP Trigger: TGGGTCAACCTCCTGCATCTGCTTCTCTATGGAGCATCTGCCCTCAGCTCTGGGTGGGGGCAGATGGCAAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR GCA 72 bp | GGCTGGAGAGATGGCTCAGTAGTTAAGGCCACTGTCTaGTCTTCCAGAGGACCTGGGATTCAATTCCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: GWRDGSVVKATV*SSRGPGIQFPA Trigger: TGCTGGGAATTGAATCCCAGGTCCTCTGGAAGAGCAGACAGTGGCCTTAACTACTGAGCCATCTCTCCAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR CCA 72 bp | GAACCAAGAGCCACTCTTCCAAGAATGACCAGGGGCTaGAGAGATGGCTCAGTAGTTAAGGCCACTGTCTGC | + |
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Preference number: 3 (lower is better) Translates to: EPRATLPRMTRG*RDGSVVKATVC Trigger: GCAGACAGTGGCCTTAACTACTGAGCCATCTCTCCAGCCCCTGGTCATTCTTGGAAGAGTGGCTCTTGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR TCA 72 bp | TGGCTCACAACATTTGTAACTCAGTTCCAGGGGCTCTaGTTCTCTCATCTGTCCTCCTTTGGGTACCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: WLTTFVTQFQGL*FSHLSSFGYQA Trigger: GGCCTGGTACCCAAAGGAGGACAGATGAGAGAATCAGAGCCCCTGGAACTGAGTTACAAATGTTGTGAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR CCA 72 bp | TTCCAGAGGACCTGGGATTCAATTCCCAGCACATGGTaGCTCACAACATTTGTAACTCAGTTCCAGGGGCTC | + |
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Preference number: 3 (lower is better) Translates to: FQRTWDSIPSTW*LTTFVTQFQGL Trigger: GAGCCCCTGGAACTGAGTTACAAATGTTGTGAGCCACCATGTGCTGGGAATTGAATCCCAGGTCCTCTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR CCA 72 bp | CTCTTCCAGAGGACCTGGGATTCAATTCCCAGCACATaGTGGCTCACAACATTTGTAACTCAGTTCCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: LFQRTWDSIPST*WLTTFVTQFQG Trigger: CCCCTGGAACTGAGTTACAAATGTTGTGAGCCACCATGTGCTGGGAATTGAATCCCAGGTCCTCTGGAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR TCA 72 bp | AAATTAGCACCATCCTACAAGGAAACGGCCCGCATGTaGGGTAGAGAGCTCCTTTTCAGCGATGGCCTATCA | + |
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Preference number: 3 (lower is better) Translates to: KLAPSYKETARM*GRELLFSDGLS Trigger: TGATAGGCCATCGCTGAAAAGGAGCTCTCTACCTCACATGCGGGCCGTTTCCTTGTAGGATGGTGCTAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR TCA 72 bp | CAGAGCCCAGACTACCAATTACTCAGAAGGCTGAGGTaGATCACACATTCAACCTCTCTCTCTCTCTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: QSPDYQLLRRLR*ITHSTSLSLSL Trigger: GAGAGAGAGAGAGAGAGAGGTTGAATGTGTGATTCACCTCAGCCTTCTGAGTAATTGGTAGTCTGGGCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR CCA 72 bp | GCGATGGCCTATCACTTGGCAGGAGTGTTGCAAATATaGAGCCAAACTCAGGCTTTCCCCATGATACAGAAA | + |
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Preference number: 3 (lower is better) Translates to: AMAYHLAGVLQI*SQTQAFPMIQK Trigger: TTTCTGTATCATGGGGAAAGCCTGAGTTTGGCTCCATATTTGCAACACTCCTGCCAAGTGATAGGCCATCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR TCA 72 bp | TTGACCAGAGCCCAGACTACCAATTACTCAGAAGGCTaGGGTGAATCACACATTCAACCTCTCTCTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: LTRAQTTNYSEG*GESHIQPLSLS Trigger: AGAGAGAGAGAGAGGTTGAATGTGTGATTCACCTCAGCCTTCTGAGTAATTGGTAGTCTGGGCTCTGGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR GCA 72 bp | TTAGTCACCCGTAGCAAACTGAAGTCTACCTCCTGCTaGTTGGTACCAATCACCCCATTTCCTCTTAAACCT | + |
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Preference number: 3 (lower is better) Translates to: LVTRSKLKSTSC*LVPITPFPLKP Trigger: AGGTTTAAGAGGAAATGGGGTGATTGGTACCAAGCAGCAGGAGGTAGACTTCAGTTTGCTACGGGTGACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR GCA 72 bp | GCAGAAGTCATATTTGATGTACCACGTCGGTACAGCTaGCCAAGGCAAGAAGGTAGTAAAGTTTTACTGAGC | + |
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Preference number: 3 (lower is better) Translates to: AEVIFDVPRRYS*PRQEGSKVLLS Trigger: GCTCAGTAAAACTTTACTACCTTCTTGCCTTGGGCAGCTGTACCGACGTGGTACATCAAATATGACTTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR TCA 72 bp | CACACACACACACACAAACCTGGGCACAAAATAGACTaGTTAGGTTTTCTGAAGAGCTACCCTGTGGGTAAA | + |
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Preference number: 3 (lower is better) Translates to: HTHTHKPGHKID*LGFLKSYPVGK Trigger: TTTACCCACAGGGTAGCTCTTCAGAAAACCTAATCAGTCTATTTTGTGCCCAGGTTTGTGTGTGTGTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR TCA 72 bp | ACCCCATTTCCTCTTAAACCTTTCAGTGTACTGTGTTaGTGCCTCACACCCAGCCTGAACCAACTTTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: TPFPLKPFSVLC*CLTPSLNQLFK Trigger: TTTGAAAAGTTGGTTCAGGCTGGGTGTGAGGCATCAACACAGTACACTGAAAGGTTTAAGAGGAAATGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR-3UTR CAA 90 bp | CATGCAGAACAGGCATGTATACATAATAAAGAAATCATCACCCCAAAGCAGCGTCACTTGGCAGGAGTGTaGCAAATATGGAGCCAAACT | + |
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Preference number: 3 (lower is better) Translates to: HAEQACIHNKEIITPKQRHLAGV*QIWSQT Trigger: AGTTTGGCTCCATATTTGCAACACTCCTGCCAAGTG...ACGCTGCTTTGGGGTGATGATTTCTTTATTATGTATACATGCCTGTTCTGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR TCA 72 bp | GGGGAGGTTCTGCCTTCTATAAATGAGTCTCCTGACTaGATATTATCTGTATACACAAACCAAGAAGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: GEVLPSINESPD*ILSVYTNQEGS Trigger: GCTGCCTTCTTGGTTTGTGTATACAGATAATATTCAGTCAGGAGACTCATTTATAGAAGGCAGAACCTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| 3UTR TCA 72 bp | TACAGCACATGGCATGATACTCTTTTTGTTTCTGTATaGTCCCTAAGAAGAGACAGATTTCACTTGTGGGAA | + |
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Preference number: 3 (lower is better) Translates to: YSTWHDTLFVSV*SLRRDRFHLWE Trigger: TTCCCACAAGTGAAATCTGTCTCTTCTTAGGGATCATACAGAAACAAAAAGAGTATCATGCCATGTGCTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| CDS-3UTR GCA 90 bp | TGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTGCTCCCATGGGCCCCCGGATGTCTaGCTGGGAATCAGCCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: CSGFGLWSSGPGLWVCSHGPPDV*LGISRG Trigger: ACCCCGGCTGATTCCCAGGCAGACATCCGGGGGCCC...ATGGGAGCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| CDS-3UTR CCA 90 bp | TCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTGCTCCCATTCTGCCAGGGACCACCTCTaGCGGAAGCACCGGCCACAC | + |
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Preference number: 4 (lower is better) Translates to: SGFGLWSSGPGLWVCSHSARDHL*RKHRPH Trigger: GTGTGGCCGGTGCTTCCGCCAGAGGTGGTCCCTGGC...AGAATGGGAGCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| CDS-3UTR CCA 90 bp | TGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCAGCCGGGGTTTGCTaGGCTTCCGCCCTCGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: CCRAPSVLGSGCGAAGQGSAGVC*ASALVS Trigger: GGAAACGAGGGCGGAAGCCCAGCAAACCCCGGCTGA...GCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| CDS-3UTR CCA 90 bp | TGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTGCTCCCATCACAGTCAGGGCAGATaGGGCCCCCGGATGTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: CSGFGLWSSGPGLWVCSHHSQGR*GPRMSA Trigger: GGCAGACATCCGGGGGCCCCATCTGCCCTGACTGTG...ATGGGAGCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| CDS-3UTR CCA 90 bp | ACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTGCTTCTGGGCGCACTTGTaGCTCTCCAGGGCGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TQCSGFGLWSSGPGLWVCFWAHL*LSRARW Trigger: CCACCTCGCCCTGGAGAGCCACAAGTGCGCCCAGAA...GCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACACTGGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTGCTCCCATGCGTGCTGCGATGGATaGCCAAGGAGCCGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CSGFGLWSSGPGLWVCSHACCDG*PRSRSS Trigger: GGAGGAGCGGCTCCTTGGCCATCCATCGCAGCACGC...ATGGGAGCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | ACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTGCGCACGCGCCGATGACTaGCCAGCAGTGAGGGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQCSGFGLWSSGPGLWVCARADD*PAVRDR Trigger: CCTATCCCTCACTGCTGGCCAGTCATCGGCGCGTGC...GCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACACTGGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR GCA 90 bp | ACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTGCTCTCCTCCGTGTGCGTaGTGCGATGGATGGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQCSGFGLWSSGPGLWVCSPPCA*CDGWPR Trigger: CCTTGGCCATCCATCGCAGCACGCACACGGAGGAGA...GCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACACTGGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR GCA 90 bp | TGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTCCTCCGTGTGCGTaGTGCGATGGATGGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CCRAPSVLGSGCGAAGQGSPPCA*CDGWPR Trigger: CCTTGGCCATCCATCGCAGCACGCACACGGAGGAGA...GCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | ACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGTGTGCGTGCTGCGATaGATGGCCAAGGAGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TCCRAPSVLGSGCGAAGQVCVLR*MAKEPL Trigger: GAGCGGCTCCTTGGCCATCCATCGCAGCACGCACAC...CTGGCCCGCTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTGCTCCCATTCTTTGGGGCAGCACTTGTaGACAGCCAGGGACCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGFGLWSSGPGLWVCSHSLGQHL*TARDHL Trigger: GAGGTGGTCCCTGGCTGTCCACAAGTGCTGCCCCAA...AGAATGGGAGCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCGGGAGTGTGCCCGCCGGTaGCTGACCAACAGGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: FRHAVGHPVFWVRAVEQRECARR*LTNRDG Trigger: CCCATCCCTGTTGGTCAGTCACCGGCGGGCACACTC...CCGCTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | TGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTGCTCCCATGAACTTCAAGGCCCTTaGCCTCCTGCCCCTTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CSGFGLWSSGPGLWVCSHELQGP*PPAPFP Trigger: CGGAAAAGGGGCAGGAGGCCAAGGGCCTTGAAGTTC...ATGGGAGCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTGCTCCCATTCTCTCTCCAGGGCGAGGTaGTCAGGAAAGGTACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGFGLWSSGPGLWVCSHSLSRAR*SGKVQP Trigger: TGGCTGTACCTTTCCTGACCACCTCGCCCTGGAGAG...AGAATGGGAGCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTGCAAGAGCTGGTGCTaGGACAGGTTTTTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CCRAPSVLGSGCGAAGQGCKSWC*DRFFLW Trigger: CCAGAGGAAAAACCTGTCTCAGCACCAGCTCTTGCA...GCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTGCTCCCATTCACTGACCAACAGGGATaGGTAGGAAAAGCGACGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FWVRAVEQRARALGLLPFTDQQG*VGKATP Trigger: GGGCGTCGCTTTTCCTACCCATCCCTGTTGGTCAGT...GAATGGGAGCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | ACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTGCGACAAGTGGCTCCACTaGGCAAAGCGTTTGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TQCSGFGLWSSGPGLWVCDKWLH*AKRLEQ Trigger: TTGCTCCAAACGCTTTGCCCAGTGGAGCCACTTGTC...GCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACACTGGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | TTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTGCTCCCATTCTACCATTGGGGGTGTTaGGGCAGCACTTGTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: FWVRAVEQRARALGLLPFYHWGC*GSTCGQ Trigger: CTGTCCACAAGTGCTGCCCCAACACCCCCAATGGTA...GAATGGGAGCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR TCA 90 bp | TGTTTCAGACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGGAGTGTGCCCGCCGGTaGCTGACCAACAGGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: CFRHAVGHPVFWVRAVEQECARR*LTNRDG Trigger: CCCATCCCTGTTGGTCAGTCACCGGCGGGCACACTC...CTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR TCA 90 bp | TGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTGTATGACCTGGTGCTaGGACAGGTTTTTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CCRAPSVLGSGCGAAGQGCMTWC*DRFFLW Trigger: CCAGAGGAAAAACCTGTCTCAGCACCAGGTCATACA...GCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR GCA 90 bp | ACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTGCTTTCCCCTTTCGGGGTaGTTCCTTAGGTGGGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: TQCSGFGLWSSGPGLWVCFPLSG*FLRWEY Trigger: GTATTCCCACCTAAGGAAGCACCCCGAAAGGGGAAA...GCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACACTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTCAGACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGGCGTGGTCCGGTGATTaGCCAACGACCGGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CFRHAVGHPVFWVRAVEQAWSGD*PTTGSC Trigger: GCAGGAGCCGGTCGTTGGCCAATCACCGGACCACGC...CTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR TCA 90 bp | AACTGTTTCAGACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGGTGCCCGCCGGTGACTaGCCAACAGGGATGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: NCFRHAVGHPVFWVRAVEVPAGD*PTGMGR Trigger: CCTACCCATCCCTGTTGGTCAGTCACCGGCGGGCAC...CTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAAACAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR GCA 90 bp | TACAAGTCAGTGTTTGCCATCTGCCCCCACCCAGAGCTGAGGGCAGATGCTCCACCTCCGTGTGCGTGCTaGGATGGATGGCCAAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YKSVFAICPHPELRADAPPPCAC*DGWPRS Trigger: GCTCCTTGGCCATCCATCGCAGCACGCACACGGAGG...TGGAGCATCTGCCCTCAGCTCTGGGTGGGGGCAGATGGCAAACACTGACTTGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR GCA 90 bp | TGTTTCAGACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCCTCCGTGTGCGTGCTaGGATGGATGGCCAAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CFRHAVGHPVFWVRAVEQPPCAC*DGWPRS Trigger: GCTCCTTGGCCATCCATCGCAGCACGCACACGGAGG...CTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCGGCCAGGAGATGAGAGCTaGTTTGGGACCTGCGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: FRHAVGHPVFWVRAVEQRPGDES*FGTCAS Trigger: GGATGCGCAGGTCCCAAACCAGCTCTCATCTCCTGG...CCGCTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTCAGACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCCCCGGATGTCTGCCTaGGAATCAGCCGGGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CFRHAVGHPVFWVRAVEQPRMSA*ESAGVC Trigger: GCAAACCCCGGCTGATTCCCAGGCAGACATCCGGGG...CTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | CTGTTTCAGACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCATTCTGGGCGCACTTGTaGCTCTCCAGGGCGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFQTCCRAPSVLGSGCGAFWAHL*LSRARW Trigger: CCACCTCGCCCTGGAGAGCCACAAGTGCGCCCAGAA...TGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAAACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR TCA 90 bp | TACAAGTCAGTGTTTGCCATCTGCCCCCACCCAGAGCTGAGGGCAGATGCTCCAATGACTGGCCAGCAGTaGGGGATAGGCAAAGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: YKSVFAICPHPELRADAPMTGQQ*GIGKAA Trigger: CGCCGCTTTGCCTATCCCTCACTGCTGGCCAGTCAT...TGGAGCATCTGCCCTCAGCTCTGGGTGGGGGCAGATGGCAAACACTGACTTGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR TCA 90 bp | TGTTTCAGACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGATGACTGGCCAGCAGTaGGGGATAGGCAAAGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: CFRHAVGHPVFWVRAVEQMTGQQ*GIGKAA Trigger: CGCCGCTTTGCCTATCCCTCACTGCTGGCCAGTCAT...CTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCGACAGGTTTTTCCTCTaGGAAAAACGTTTGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: CCRAPSVLGSGCGAAGQGDRFFL*EKRLPH Trigger: GTGTGGCAAACGTTTTTCCCAGAGGAAAAACCTGTC...GCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | TACAAGTCAGTGTTTGCCATCTGCCCCCACCCAGAGCTGAGGGCAGATGCTCCATCTCACCGGTGTGCGTaGTCCGGTGATTGGCCAACG | + |
|
Preference number: 4 (lower is better) Translates to: YKSVFAICPHPELRADAPSHRCA*SGDWPT Trigger: CGTTGGCCAATCACCGGACCACGCACACCGGTGAGA...TGGAGCATCTGCCCTCAGCTCTGGGTGGGGGCAGATGGCAAACACTGACTTGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR CCA 90 bp | GATGGCTCCGTGGTTAAGAGCACTGACTGCTCCTCCAGAGGTTCCGAGTTCAATGCGTGCTGCGATGGATaGCCAAGGAGCCGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DGSVVKSTDCSSRGSEFNACCDG*PRSRSS Trigger: GGAGGAGCGGCTCCTTGGCCATCCATCGCAGCACGC...ATTGAACTCGGAACCTCTGGAGGAGCAGTCAGTGCTCTTAACCACGGAGCCATC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR CCA 90 bp | ACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGACTGGGCAAAGCGTTTaGAGCAAAGGTCACAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TCCRAPSVLGSGCGAAGQTGQSV*SKGHRH Trigger: ATGCCTGTGACCTTTGCTCCAAACGCTTTGCCCAGT...CTGGCCCGCTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR GCA 90 bp | GGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTTCTCTTCAGTCTTCTaGTTGGATCTGGTTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GTQCSGFGLWSSGPGLWVFSSVF*LDLVFL Trigger: GAGAAAAACCAGATCCAAGCAGAAGACTGAAGAGAA...GACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACACTGGGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR GCA 90 bp | GGAACCAAGAGCCACTCTTCCAAGAATGACCAGGGGCTGGAGAGATGGCTCAGTGCTGGAGCAGGGTGCTaGGCTGAGAAAAGCGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTKSHSSKNDQGLERWLSAGAGC*AEKSGL Trigger: AAGCCCGCTTTTCTCAGCGCAGCACCCTGCTCCAGC...ACTGAGCCATCTCTCCAGCCCCTGGTCATTCTTGGAAGAGTGGCTCTTGGTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR GCA 90 bp | GATGGCTCCGTGGTTAAGAGCACTGACTGCTCCTCCAGAGGTTCCGAGTTCAATGGTGCTGGAGCAGGGTaGTGCGCTGAGAAAAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: DGSVVKSTDCSSRGSEFNGAGAG*CAEKSG Trigger: CCCGCTTTTCTCAGCGCAGCACCCTGCTCCAGCACC...ATTGAACTCGGAACCTCTGGAGGAGCAGTCAGTGCTCTTAACCACGGAGCCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR CCA 90 bp | TACAAGTCAGTGTTTGCCATCTGCCCCCACCCAGAGCTGAGGGCAGATGCTCCAGAACTTCAAGGCCCTTaGCCTCCTGCCCCTTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: YKSVFAICPHPELRADAPELQGP*PPAPFP Trigger: CGGAAAAGGGGCAGGAGGCCAAGGGCCTTGAAGTTC...TGGAGCATCTGCCCTCAGCTCTGGGTGGGGGCAGATGGCAAACACTGACTTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR CCA 90 bp | TGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTGCTCCCATGACAGGTTTTTCCTCTaGGAAAAACGTTTGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: CSGFGLWSSGPGLWVCSHDRFFL*EKRLPH Trigger: GTGTGGCAAACGTTTTTCCCAGAGGAAAAACCTGTC...ATGGGAGCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | CCCAAAGCAGCGTGGCCTGGAGTAGTTAAGATTGGTGTATACAGCACATGGCATGCCAGGGACCACCTCTaGCGGAAGCACCGGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PKAAWPGVVKIGVYSTWHARDHL*RKHRPH Trigger: GTGTGGCCGGTGCTTCCGCCAGAGGTGGTCCCTGGC...ATGCCATGTGCTGTATACACCAATCTTAACTACTCCAGGCCACGCTGCTTTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR CCA 90 bp | TACAAGTCAGTGTTTGCCATCTGCCCCCACCCAGAGCTGAGGGCAGATGCTCCAACTGACCAACAGGGATaGGTAGGAAAAGCGACGCCC | + |
|
Preference number: 4 (lower is better) Translates to: YKSVFAICPHPELRADAPTDQQG*VGKATP Trigger: GGGCGTCGCTTTTCCTACCCATCCCTGTTGGTCAGT...TGGAGCATCTGCCCTCAGCTCTGGGTGGGGGCAGATGGCAAACACTGACTTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR GCA 90 bp | TCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTGCTCCCATTCTTTCTCTTCAGTCTTCTaGTTGGATCTGGTTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGFGLWSSGPGLWVCSHSFSSVF*LDLVFL Trigger: GAGAAAAACCAGATCCAAGCAGAAGACTGAAGAGAA...AGAATGGGAGCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | GATGGCTCCGTGGTTAAGAGCACTGACTGCTCCTCCAGAGGTTCCGAGTTCAATCCAGGAGATGAGAGCTaGTTTGGGACCTGCGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: DGSVVKSTDCSSRGSEFNPGDES*FGTCAS Trigger: GGATGCGCAGGTCCCAAACCAGCTCTCATCTCCTGG...ATTGAACTCGGAACCTCTGGAGGAGCAGTCAGTGCTCTTAACCACGGAGCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR CCA 90 bp | CTGTTTCAGACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGGTTTCTTCAGATTCTaGGCGCACTTGTGGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LFQTCCRAPSVLGSGCGAGFFRF*AHLWLS Trigger: GGAGAGCCACAAGTGCGCCCAGAATCTGAAGAAACC...TGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR GCA 90 bp | AGAGACAGATTTCACTTGTGGGAACCAAGAGCCACTCTTCCAAGAATGACCAGGCCAACGACCGGCTCCTaGGAAAGCAGCGGCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RDRFHLWEPRATLPRMTRPTTGS*ESSGHS Trigger: ACTGTGGCCGCTGCTTTCGCAGGAGCCGGTCGTTGG...CCTGGTCATTCTTGGAAGAGTGGCTCTTGGTTCCCACAAGTGAAATCTGTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR CCA 90 bp | TGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTGCTCCCATTCTTCTGCTTGGATCTaGTTTTTCTCTGGAATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: CSGFGLWSSGPGLWVCSHSSAWI*FFSGML Trigger: TAACATTCCAGAGAAAAACCAGATCCAAGCAGAAGA...ATGGGAGCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | CACATGGTGGCTCACAACATTTGTAACTCAGTTCCAGGGGCTCTGATTCTCTCACCCCGGATGTCTGCCTaGGAATCAGCCGGGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HMVAHNICNSVPGALILSPRMSA*ESAGVC Trigger: GCAAACCCCGGCTGATTCCCAGGCAGACATCCGGGG...TGAGAGAATCAGAGCCCCTGGAACTGAGTTACAAATGTTGTGAGCCACCATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR CCA 90 bp | TCACCCCATTTCCTCTTAAACCTTTCAGTGTACTGTGTTGATGCCTCACACCCACACAGTCAGGGCAGATaGGGCCCCCGGATGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPHFLLNLSVYCVDASHPHSQGR*GPRMSA Trigger: GGCAGACATCCGGGGGCCCCATCTGCCCTGACTGTG...TGGGTGTGAGGCATCAACACAGTACACTGAAAGGTTTAAGAGGAAATGGGGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR CCA 90 bp | TGTTTCAGACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGACTGGGCAAAGCGTTTaGAGCAAAGGTCACAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CFRHAVGHPVFWVRAVEQTGQSV*SKGHRH Trigger: ATGCCTGTGACCTTTGCTCCAAACGCTTTGCCCAGT...CTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR GCA 90 bp | AACTGTTTCAGACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGTTTCCCCTTTCGGGGTaGTTCCTTAGGTGGGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: NCFRHAVGHPVFWVRAVEFPLSG*FLRWEY Trigger: GTATTCCCACCTAAGGAAGCACCCCGAAAGGGGAAA...CTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAAACAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | AACATTTGTAACTCAGTTCCAGGGGCTCTGATTCTCTCATCTGTCCTCCTTTGGGTGTGCGTGCTGCGATaGATGGCCAAGGAGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NICNSVPGALILSSVLLWVCVLR*MAKEPL Trigger: GAGCGGCTCCTTGGCCATCCATCGCAGCACGCACAC...CCAAAGGAGGACAGATGAGAGAATCAGAGCCCCTGGAACTGAGTTACAAATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR CCA 90 bp | GATGGCTCCGTGGTTAAGAGCACTGACTGCTCCTCCAGAGGTTCCGAGTTCAATGACAAGTGGCTCCACTaGGCAAAGCGTTTGGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: DGSVVKSTDCSSRGSEFNDKWLH*AKRLEQ Trigger: TTGCTCCAAACGCTTTGCCCAGTGGAGCCACTTGTC...ATTGAACTCGGAACCTCTGGAGGAGCAGTCAGTGCTCTTAACCACGGAGCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR CCA 90 bp | CACATGGTGGCTCACAACATTTGTAACTCAGTTCCAGGGGCTCTGATTCTCTCACTCTCCAGGGCGAGGTaGTCAGGAAAGGTACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HMVAHNICNSVPGALILSLSRAR*SGKVQP Trigger: TGGCTGTACCTTTCCTGACCACCTCGCCCTGGAGAG...TGAGAGAATCAGAGCCCCTGGAACTGAGTTACAAATGTTGTGAGCCACCATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR GCA 90 bp | AACTGTTTCAGACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGTCTGGGAAAAACGTTTaGCACACTGGTCACAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: NCFRHAVGHPVFWVRAVESGKNV*HTGHKR Trigger: ACGTTTGTGACCAGTGTGGCAAACGTTTTTCCCAGA...CTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAAACAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTCAGACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCTTCAGTCTTCTGCTTaGATCTGGTTTTTCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CFRHAVGHPVFWVRAVEQLQSSA*IWFFSG Trigger: TCCAGAGAAAAACCAGATCCAAGCAGAAGACTGAAG...CTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| 3UTR CAA 72 bp | AGGTTGACCCAGTTCAGCTGTTGGCAGAAGTCATATTaGATGTACCACGTCGGTACAGCTGCCCAAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLTQFSCWQKSY*MYHVGTAAQGK Trigger: CTTGCCTTGGGCAGCTGTACCGACGTGGTACATCAAATATGACTTCTGCCAACAGCTGAACTGGGTCAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR TCA 90 bp | TCTGACCATGCAGAACAGGCATGTATACATAATAAAGAAATCATCACCCCAAAGGTGCCCGCCGGTGACTaGCCAACAGGGATGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SDHAEQACIHNKEIITPKVPAGD*PTGMGR Trigger: CCTACCCATCCCTGTTGGTCAGTCACCGGCGGGCAC...CTTTGGGGTGATGATTTCTTTATTATGTATACATGCCTGTTCTGCATGGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR CCA 90 bp | GACCTCTGGCAGCTACTCCTGAGTTTTGCACCCTTCCATAAAGTGACTTTCTGTGGTTTCTTCAGATTCTaGGCGCACTTGTGGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DLWQLLLSFAPFHKVTFCGFFRF*AHLWLS Trigger: GGAGAGCCACAAGTGCGCCCAGAATCTGAAGAAACC...ACAGAAAGTCACTTTATGGAAGGGTGCAAAACTCAGGAGTAGCTGCCAGAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | CATGCAGAACAGGCATGTATACATAATAAAGAAATCATCACCCCAAAGCAGCGTGTATGGATGCGCTGGTaGATGACCAGGGCGGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HAEQACIHNKEIITPKQRVWMRW*MTRAVR Trigger: GCGCACCGCCCTGGTCATCCACCAGCGCATCCATAC...ACGCTGCTTTGGGGTGATGATTTCTTTATTATGTATACATGCCTGTTCTGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR CCA 90 bp | TCACCCCATTTCCTCTTAAACCTTTCAGTGTACTGTGTTGATGCCTCACACCCATACCATTGGGGGTGTTaGGGCAGCACTTGTGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SPHFLLNLSVYCVDASHPYHWGC*GSTCGQ Trigger: CTGTCCACAAGTGCTGCCCCAACACCCCCAATGGTA...TGGGTGTGAGGCATCAACACAGTACACTGAAAGGTTTAAGAGGAAATGGGGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| 3UTR CAA 72 bp | TCCTTTTCAGCGATGGCCTATCACTTGGCAGGAGTGTaGCAAATATGGAGCCAAACTCAGGCTTTCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SFSAMAYHLAGV*QIWSQTQAFPM Trigger: CATGGGGAAAGCCTGAGTTTGGCTCCATATTTGCAACACTCCTGCCAAGTGATAGGCCATCGCTGAAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| 3UTR CAA 72 bp | AGTTCCAGGGGCTCTGATTCTCTCATCTGTCCTCCTTaGGGTACCAGGCCCAATCATGGTGTAGAGATATAC | + |
|
Preference number: 4 (lower is better) Translates to: SSRGSDSLICPP*GTRPNHGVEIY Trigger: GTATATCTCTACACCATGATTGGGCCTGGTACCCAAAGGAGGACAGATGAGAGAATCAGAGCCCCTGGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| 3UTR CAA 72 bp | GAGAAGCAGATGCAGGAGGTTGACCCAGTTCAGCTGTaGGCAGAAGTCATATTTGATGTACCACGTCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: EKQMQEVDPVQL*AEVIFDVPRRY Trigger: GTACCGACGTGGTACATCAAATATGACTTCTGCCAACAGCTGAACTGGGTCAACCTCCTGCATCTGCTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR CCA 90 bp | CTGTTTCAGACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCATCTTCTGCTTGGATCTaGTTTTTCTCTGGAATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LFQTCCRAPSVLGSGCGASSAWI*FFSGML Trigger: TAACATTCCAGAGAAAAACCAGATCCAAGCAGAAGA...TGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAAACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | CTACTCCTGAGTTTTGCACCCTTCCATAAAGTGACTTTCTGTCATCTTTGTTATTCAGCCGGGGTTTGCTaGGCTTCCGCCCTCGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLSFAPFHKVTFCHLCYSAGVC*ASALVS Trigger: GGAAACGAGGGCGGAAGCCCAGCAAACCCCGGCTGA...ATAACAAAGATGACAGAAAGTCACTTTATGGAAGGGTGCAAAACTCAGGAGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CCA 90 bp | TCTGACCATGCAGAACAGGCATGTATACATAATAAAGAAATCATCACCCCAAAGGCACGCGCCGATGACTaGCCAGCAGTGAGGGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SDHAEQACIHNKEIITPKARADD*PAVRDR Trigger: CCTATCCCTCACTGCTGGCCAGTCATCGGCGCGTGC...CTTTGGGGTGATGATTTCTTTATTATGTATACATGCCTGTTCTGCATGGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR CCA 90 bp | GACCATGCAGAACAGGCATGTATACATAATAAAGAAATCATCACCCCAAAGCAGTTGGGGCAGCACTTGTaGACAGCCAGGGACCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: DHAEQACIHNKEIITPKQLGQHL*TARDHL Trigger: GAGGTGGTCCCTGGCTGTCCACAAGTGCTGCCCCAA...CTGCTTTGGGGTGATGATTTCTTTATTATGTATACATGCCTGTTCTGCATGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| 3UTR CAA 72 bp | GTCACCCGTAGCAAACTGAAGTCTACCTCCTGCTGCTaGGTACCAATCACCCCATTTCCTCTTAAACCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VTRSKLKSTSCC*VPITPFPLKPF Trigger: GAAAGGTTTAAGAGGAAATGGGGTGATTGGTACCAAGCAGCAGGAGGTAGACTTCAGTTTGCTACGGGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR CCA 90 bp | ATTTTAAGACAAGTTAGCTTGGAAAACTTTAATCACATGGCATCATGTCGCCTGGAGTGCACACGCCGGTaGCTAACCAGGCGAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILRQVSLENFNHMASCRLECTRR*LTRREE Trigger: CTCCTCTCGCCTGGTTAGCCACCGGCGTGTGCACTC...CAGGCGACATGATGCCATGTGATTAAAGTTTTCCAAGCTAACTTGTCTTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR GCA 90 bp | CACATGGTGGCTCACAACATTTGTAACTCAGTTCCAGGGGCTCTGATTCTCTCATCTGGGAAAAACGTTTaGCACACTGGTCACAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: HMVAHNICNSVPGALILSSGKNV*HTGHKR Trigger: ACGTTTGTGACCAGTGTGGCAAACGTTTTTCCCAGA...TGAGAGAATCAGAGCCCCTGGAACTGAGTTACAAATGTTGTGAGCCACCATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR CCA 90 bp | TCACCCCATTTCCTCTTAAACCTTTCAGTGTACTGTGTTGATGCCTCACACCCAGATCTGGTTTTTCTCTaGAATGTTACCCATCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SPHFLLNLSVYCVDASHPDLVFL*NVTHLR Trigger: CCGGAGATGGGTAACATTCCAGAGAAAAACCAGATC...TGGGTGTGAGGCATCAACACAGTACACTGAAAGGTTTAAGAGGAAATGGGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR CCA 90 bp | CATGCAGAACAGGCATGTATACATAATAAAGAAATCATCACCCCAAAGCAGCGTCTTCAGTCTTCTGCTTaGATCTGGTTTTTCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HAEQACIHNKEIITPKQRLQSSA*IWFFSG Trigger: TCCAGAGAAAAACCAGATCCAAGCAGAAGACTGAAG...ACGCTGCTTTGGGGTGATGATTTCTTTATTATGTATACATGCCTGTTCTGCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR CAA 90 bp | TGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCAGATTCTGGGCGCACTaGTGGCTCTCCAGGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CCRAPSVLGSGCGAAGQGRFWAH*WLSRAR Trigger: CCTCGCCCTGGAGAGCCACAAGTGCGCCCAGAATCT...GCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| CDS-3UTR CAA 90 bp | CACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTGCGAACTTCAAGGCCCTaGGCCTCCTGCCCCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HPVFWVRAVEQRARALGLRTSRP*ASCPFS Trigger: GGAAAAGGGGCAGGAGGCCAAGGGCCTTGAAGTTCG...CAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACACTGGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| CDS-3UTR CAA 90 bp | TGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTGCTCCCATGAGATGAGAGCTGGTTaGGGACCTGCGCATCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CSGFGLWSSGPGLWVCSHEMRAG*GPAHPS Trigger: GCTCGGATGCGCAGGTCCCAAACCAGCTCTCATCTC...ATGGGAGCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| CDS-3UTR CAA 90 bp | TTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGGGCTCTGGGTCTGCTCCCATTCCTACCATTGGGGGTGTaGGGGCAGCACTTGTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: FWVRAVEQRARALGLLPFLPLGV*GQHLWT Trigger: TGTCCACAAGTGCTGCCCCAACACCCCCAATGGTAG...GAATGGGAGCAGACCCAGAGCCCTGGCCCGCTGCTCCACAGCCCGAACCCAGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| CDS-3UTR CAA 90 bp | TGTTTCAGACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGGTGTTGGGGCAGCACTaGTGGACAGCCAGGGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: CFRHAVGHPVFWVRAVEQVLGQH*WTARDH Trigger: GTGGTCCCTGGCTGTCCACAAGTGCTGCCCCAACAC...CTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTCAGACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCGAACTTCAAGGCCCTaGGCCTCCTGCCCCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CFRHAVGHPVFWVRAVEQRTSRP*ASCPFS Trigger: GGAAAAGGGGCAGGAGGCCAAGGGCCTTGAAGTTCG...CTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGTCTGAAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CAA 90 bp | ACATGCTGTAGGGCACCCAGTGTTCTGGGTTCGGGCTGTGGAGCAGCGGGCCAGTCTTCAGTCTTCTGCTaGGATCTGGTTTTTCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TCCRAPSVLGSGCGAAGQSSVFC*DLVFLW Trigger: CCAGAGAAAAACCAGATCCAAGCAGAAGACTGAAGA...CTGGCCCGCTGCTCCACAGCCCGAACCCAGAACACTGGGTGCCCTACAGCATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| CDS-3UTR CAA 90 bp | GGAACCAAGAGCCACTCTTCCAAGAATGACCAGGGGCTGGAGAGATGGCTCAGTCCCTGTGTGTGTCCGTaGGTGGATAGCGAGCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GTKSHSSKNDQGLERWLSPCVCP*VDSEQR Trigger: TCTCTGCTCGCTATCCACCAACGGACACACACAGGG...ACTGAGCCATCTCTCCAGCCCCTGGTCATTCTTGGAAGAGTGGCTCTTGGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS CCA 90 bp | GCTGGGCTTCCGCCCTCGTTTCCCCTTTCGGGGTGCTTCCTTAGGTaGGAATACGTCCTTCTCTTCAGTCTTCTGCTTGGATCTGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: AGLPPSFPLSGCFLR*EYVLLFSLLLGSGF Trigger: AAAACCAGATCCAAGCAGAAGACTGAAGAGAAGGACGTATTCCCACCTAAGGAAGCACCCCGAAAGGGGAAACGAGGGCGGAAGCCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| CDS-3UTR CAA 90 bp | CGGCCCGCATGTGAGGTAGAGAGCTCCTTTTCAGCGATGGCCTATCACTTGGCACTCTGGGAAAAACGTTaGCCACACTGGTCACAAACG | + |
|
Preference number: 5 (lower is better) Translates to: RPACEVESSFSAMAYHLALWEKR*PHWSQT Trigger: CGTTTGTGACCAGTGTGGCAAACGTTTTTCCCAGAG...TGCCAAGTGATAGGCCATCGCTGAAAAGGAGCTCTCTACCTCACATGCGGGCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| CDS GCA 90 bp | TTGGATCTGGTTTTTCTCTGGAATGTTACCCATCTCCGGTACTCCTaGGGATCTAGGGCTGCTGGTTCCCAGTCATCGGTATTTCGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LDLVFLWNVTHLRYS*GSRAAGSQSSVFRS Trigger: GGAACGAAATACCGATGACTGGGAACCAGCAGCCCTAGATCCGCAGGAGTACCGGAGATGGGTAACATTCCAGAGAAAAACCAGATCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CAA 90 bp | GACCTCTGGCAGCTACTCCTGAGTTTTGCACCCTTCCATAAAGTGACTTTCTGTCACTGGGCAAAGCGTTaGGAGCAAAGGTCACAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: DLWQLLLSFAPFHKVTFCHWAKR*EQRSQA Trigger: TGCCTGTGACCTTTGCTCCAAACGCTTTGCCCAGTG...ACAGAAAGTCACTTTATGGAAGGGTGCAAAACTCAGGAGTAGCTGCCAGAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CAA 90 bp | TCACCCCATTTCCTCTTAAACCTTTCAGTGTACTGTGTTGATGCCTCACACCCACTACCATTGGGGGTGTaGGGGCAGCACTTGTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: SPHFLLNLSVYCVDASHPLPLGV*GQHLWT Trigger: TGTCCACAAGTGCTGCCCCAACACCCCCAATGGTAG...TGGGTGTGAGGCATCAACACAGTACACTGAAAGGTTTAAGAGGAAATGGGGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS GCA 90 bp | CGGGGTGCTTCCTTAGGTGGGAATACGTCCTTCTCTTCAGTCTTCTaGTTGGATCTGGTTTTTCTCTGGAATGTTACCCATCTCCGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RGASLGGNTSFSSVF*LDLVFLWNVTHLRY Trigger: GTACCGGAGATGGGTAACATTCCAGAGAAAAACCAGATCCAAGCAGAAGACTGAAGAGAAGGACGTATTCCCACCTAAGGAAGCACCCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CAA 90 bp | TCACCCCATTTCCTCTTAAACCTTTCAGTGTACTGTGTTGATGCCTCACACCCACACTGGGCAAAGCGTTaGGAGCAAAGGTCACAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SPHFLLNLSVYCVDASHPHWAKR*EQRSQA Trigger: TGCCTGTGACCTTTGCTCCAAACGCTTTGCCCAGTG...TGGGTGTGAGGCATCAACACAGTACACTGAAAGGTTTAAGAGGAAATGGGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR CAA 90 bp | CTCCTGACTGAATATTATCTGTATACACAAACCAAGAAGGCAGCCCCTAAAAGAGTGTTGGGGCAGCACTaGTGGACAGCCAGGGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLTEYYLYTQTKKAAPKRVLGQH*WTARDH Trigger: GTGGTCCCTGGCTGTCCACAAGTGCTGCCCCAACAC...TCTTTTAGGGGCTGCCTTCTTGGTTTGTGTATACAGATAATATTCAGTCAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS CCA 90 bp | AATACGTCCTTCTCTTCAGTCTTCTGCTTGGATCTGGTTTTTCTCTaGAATGTTACCCATCTCCGGTACTCCTGCGGATCTAGGGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: NTSFSSVFCLDLVFL*NVTHLRYSCGSRAA Trigger: AGCAGCCCTAGATCCGCAGGAGTACCGGAGATGGGTAACATTCCAGAGAAAAACCAGATCCAAGCAGAAGACTGAAGAGAAGGACGTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS-3UTR CAA 90 bp | TCTGACCATGCAGAACAGGCATGTATACATAATAAAGAAATCATCACCCCAAAGGAGATGAGAGCTGGTTaGGGACCTGCGCATCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SDHAEQACIHNKEIITPKEMRAG*GPAHPS Trigger: GCTCGGATGCGCAGGTCCCAAACCAGCTCTCATCTC...CTTTGGGGTGATGATTTCTTTATTATGTATACATGCCTGTTCTGCATGGTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
||
| CDS-3UTR CAA 90 bp | CTACTCCTGAGTTTTGCACCCTTCCATAAAGTGACTTTCTGTCATCTTTGTTATCTCTGGGAAAAACGTTaGCCACACTGGTCACAAACG | + |
|
Preference number: 5 (lower is better) Translates to: LLLSFAPFHKVTFCHLCYLWEKR*PHWSQT Trigger: CGTTTGTGACCAGTGTGGCAAACGTTTTTCCCAGAG...ATAACAAAGATGACAGAAAGTCACTTTATGGAAGGGTGCAAAACTCAGGAGTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS GCA 72 bp | CCTGCCCCTTTTCCGAGTAGGTCCAGCCTCTCCGACTaGCCGCAGGAGAAGCGGAGCCGAAGGTGGCGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PAPFPSRSSLSD*PQEKRSRRWRH Trigger: ATGGCGCCACCTTCGGCTCCGCTTCTCCTGCGGGCAGTCGGAGAGGCTGGACCTACTCGGAAAAGGGGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
||
| CDS TCA 72 bp | CGTAAGGGCACTCACCGGAGTGTGCCCGCCGGTGACTaGCCAACAGGGATGGGTAGGAAAAGCGACGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: RKGTHRSVPAGD*PTGMGRKSDAH Trigger: GTGGGCGTCGCTTTTCCTACCCATCCCTGTTGGTCAGTCACCGGCGGGCACACTCCGGTGAGTGCCCTTACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| CDS CAA 90 bp | CTGCTCCTCTGGCTGGGCCCTCCTATAAGAGGTCTAGGGCTACCATaGGGGGTGTTGGGGCAGCACTTGTGGACAGCCAGGGACCACCTC | + |
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Preference number: 6 (lower is better) Translates to: LLLWLGPPIRGLGLP*GVLGQHLWTARDHL Trigger: GAGGTGGTCCCTGGCTGTCCACAAGTGCTGCCCCAACACCCCCAATGGTAGCCCTAGACCTCTTATAGGAGGGCCCAGCCAGAGGAGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| CDS CAA 72 bp | TGGCTGGGCCCTCCTATAAGAGGTCTAGGGCTACCATaGGGGGTGTTGGGGCAGCACTTGTGGACAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: WLGPPIRGLGLP*GVLGQHLWTAR Trigger: CCTGGCTGTCCACAAGTGCTGCCCCAACACCCCCAATGGTAGCCCTAGACCTCTTATAGGAGGGCCCAGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| CDS CCA 72 bp | CCCTGTGTGTGTCCGTTGGTGGATAGCGAGCAGAGATaGATAGGCGAAGCGACGCCCACAACTAGGGCACTG | + |
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Preference number: 6 (lower is better) Translates to: PCVCPLVDSEQR*IGEATPTTRAL Trigger: CAGTGCCCTAGTTGTGGGCGTCGCTTCGCCTATCCATCTCTGCTCGCTATCCACCAACGGACACACACAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053392.11 |
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| CDS CAA 72 bp | CCTCCTATAAGAGGTCTAGGGCTACCATTGGGGGTGTaGGGGCAGCACTTGTGGACAGCCAGGGACCACCTC | + |
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Preference number: 6 (lower is better) Translates to: PPIRGLGLPLGV*GQHLWTARDHL Trigger: GAGGTGGTCCCTGGCTGTCCACAAGTGCTGCCCCAACACCCCCAATGGTAGCCCTAGACCTCTTATAGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| CDS GCA 72 bp | TTTGCTGGGCTTCCGCCCTCGTTTCCCCTTTCGGGGTaGTTCCTTAGGTGGGAATACGTCCTTCTCTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: FAGLPPSFPLSG*FLRWEYVLLFS Trigger: ACTGAAGAGAAGGACGTATTCCCACCTAAGGAAGCACCCCGAAAGGGGAAACGAGGGCGGAAGCCCAGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| CDS CCA 72 bp | CCGCCCTCGTTTCCCCTTTCGGGGTGCTTCCTTAGGTaGGAATACGTCCTTCTCTTCAGTCTTCTGCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: PPSFPLSGCFLR*EYVLLFSLLLG Trigger: TCCAAGCAGAAGACTGAAGAGAAGGACGTATTCCCACCTAAGGAAGCACCCCGAAAGGGGAAACGAGGGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| CDS GCA 72 bp | GTTTTTCTCTGGAATGTTACCCATCTCCGGTACTCCTaGGGATCTAGGGCTGCTGGTTCCCAGTCATCGGTA | + |
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Preference number: 6 (lower is better) Translates to: VFLWNVTHLRYS*GSRAAGSQSSV Trigger: TACCGATGACTGGGAACCAGCAGCCCTAGATCCGCAGGAGTACCGGAGATGGGTAACATTCCAGAGAAAAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| CDS GCA 72 bp | GGTGCTGAGACAGGTTTTTCCTCTGGGAAAAACGTTTaGCACACTGGTCACAAACGTAAGGGCACTCACCGG | + |
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Preference number: 6 (lower is better) Translates to: GAETGFSSGKNV*HTGHKRKGTHR Trigger: CCGGTGAGTGCCCTTACGTTTGTGACCAGTGTGGCAAACGTTTTTCCCAGAGGAAAAACCTGTCTCAGCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| CDS CAA 90 bp | GGTGCTTCCTTAGGTGGGAATACGTCCTTCTCTTCAGTCTTCTGCTaGGATCTGGTTTTTCTCTGGAATGTTACCCATCTCCGGTACTCC | + |
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Preference number: 6 (lower is better) Translates to: GASLGGNTSFSSVFC*DLVFLWNVTHLRYS Trigger: GGAGTACCGGAGATGGGTAACATTCCAGAGAAAAACCAGATCCAAGCAGAAGACTGAAGAGAAGGACGTATTCCCACCTAAGGAAGCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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| CDS GCA 72 bp | TCCTTAGGTGGGAATACGTCCTTCTCTTCAGTCTTCTaGTTGGATCTGGTTTTTCTCTGGAATGTTACCCAT | + |
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Preference number: 6 (lower is better) Translates to: SLGGNTSFSSVF*LDLVFLWNVTH Trigger: ATGGGTAACATTCCAGAGAAAAACCAGATCCAAGCAGAAGACTGAAGAGAAGGACGTATTCCCACCTAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000053392.11 ENSMUST00000106299.2 |
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