Pregenerated sensors for ZFP688 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045251Ensembl transcript IDs: ENSMUST00000106300.2, ENSMUST00000129038.2, ENSMUST00000148483.8
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCAGGCACAGCCCTGATCCCAGGCCTTCGGCCGCGGCGACCCCCTaGGCAGGAACGGTGGATCCATTGGTGTGCTTTCACTGCGAACTT | + |
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Preference number: 1 (lower is better) Translates to: SRHSPDPRPSAAATP*AGTVDPLVCFHCEL Trigger: AAGTTCGCAGTGAAAGCACACCAATGGATCCACCGTTCCTGCTCAGGGGGTCGCCGCGGCCGAAGGCCTGGGATCAGGGCTGTGCCTGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR CCA 90 bp | CTGATCCCAGGCCTTCGGCCGCGGCGACCCCCTGAGCAGGAACGGTaGATCCATTGGTGTGCTTTCACTGCGAACTTCCTCTTGAAGCGT | + |
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Preference number: 1 (lower is better) Translates to: LIPGLRPRRPPEQER*IHWCAFTANFLLKR Trigger: ACGCTTCAAGAGGAAGTTCGCAGTGAAAGCACACCAATGGATCCACCGTTCCTGCTCAGGGGGTCGCCGCGGCCGAAGGCCTGGGATCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR TCA 90 bp | GGGTTTGCGATGCTCTTGCCTGAATGGAGACTCCCGAGGAAGCCCTaGGAATGGAAGGTGACTGATGCTGCTGGTGGAAAAGTGCGGGAT | + |
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Preference number: 1 (lower is better) Translates to: GFAMLLPEWRLPRKP*EWKVTDAAGGKVRD Trigger: ATCCCGCACTTTTCCACCAGCAGCATCAGTCACCTTCCATTCTCAGGGCTTCCTCGGGAGTCTCCATTCAGGCAAGAGCATCGCAAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129038.2 ENSMUST00000148483.8 |
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| 3UTR GCA 90 bp | CTGCACACCTGCTATCTGGTCTGGGGCAGCTTTGGTAGGTGGCTGTaGCCCTGCAGAGGACTTGGTAGCCATGGAATAAGTCTTATGTTC | + |
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Preference number: 1 (lower is better) Translates to: LHTCYLVWGSFGRWL*PCRGLGSHGISLMF Trigger: GAACATAAGACTTATTCCATGGCTACCAAGTCCTCTGCAGGGGCACAGCCACCTACCAAAGCTGCCCCAGACCAGATAGCAGGTGTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR GCA 90 bp | CTTATGTTCAACCACCTCTTTAGGTTGCAACTGAGCAGGAGCCTCTaGCGGTCTCTCTCCTCCTTCCTTGCAGCCCCACTCTGTCTCATT | + |
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Preference number: 1 (lower is better) Translates to: LMFNHLFRLQLSRSL*RSLSSFLAAPLCLI Trigger: AATGAGACAGAGTGGGGCTGCAAGGAAGGAGGAGAGAGACCGGCAGAGGCTCCTGCTCAGTTGCAACCTAAAGAGGTGGTTGAACATAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR-3UTR TCA 90 bp | TCGGAGCTCCTCCCAGGCTTTCCCCCTCCTCAGGATCCTGGGCGGCGGGGCTCCACCCGGTCTAAATGCTaGGTTCCAGGCCAGCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: SELLPGFPPPQDPGRRGSTRSKC*VPGQPE Trigger: CTCTGGCTGGCCTGGAACTCAGCATTTAGACCGGGT...GGAGCCCCGCCGCCCAGGATCCTGAGGAGGGGGAAAGCCTGGGAGGAGCTCCGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR-3UTR GCA 90 bp | CTGATCCCAGGCCTTCGGCCGCGGCGACCCCCTGAGCAGGAACGGTGGATCCATTTTGGTAGGTGGCTGTaGCCCTGCAGAGGACTTGGT | + |
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Preference number: 2 (lower is better) Translates to: LIPGLRPRRPPEQERWIHFGRWL*PCRGLG Trigger: ACCAAGTCCTCTGCAGGGGCACAGCCACCTACCAAA...ATGGATCCACCGTTCCTGCTCAGGGGGTCGCCGCGGCCGAAGGCCTGGGATCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR-3UTR GCA 90 bp | CCGGACCTCCAGACGGAGGCGGCCATTCAACTCACCCACACTCCTCAAAAATGTGGTCGCTCACCAGAGTaGATGCGCCGGTGGCTGACC | + |
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Preference number: 2 (lower is better) Translates to: PDLQTEAAIQLTHTPQKCGRSPE*MRRWLT Trigger: GGTCAGCCACCGGCGCATGCACTCTGGTGAGCGACC...ACATTTTTGAGGAGTGTGGGTGAGTTGAATGGCCGCCTCCGTCTGGAGGTCCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAGTTCCAGGCCAGCCAGAGCTACCTCTCGGAGCTCCTCCCAGGCTTTCCCCGGACAGGGTTTGCGATaGTCTTGCCTGAATGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: LSSRPARATSRSSSQAFPGQGLR*SCLNGD Trigger: GTCTCCATTCAGGCAAGAGCATCGCAAACCCTGTCC...GGGGAAAGCCTGGGAGGAGCTCCGAGAGGTAGCTCTGGCTGGCCTGGAACTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGGTTTGGGGCCCGGGAACCCTGGACAGGGTTTGCGATGCTCTTGCCTGAATCTCCCGAGGAAGCCCTaGGAATGGAAGGTGACTGAT | + |
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Preference number: 2 (lower is better) Translates to: AGLGPGNPGQGLRCSCLNLPRKP*EWKVTD Trigger: ATCAGTCACCTTCCATTCTCAGGGCTTCCTCGGGAG...ATTCAGGCAAGAGCATCGCAAACCCTGTCCAGGGTTCCCGGGCCCCAAACCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGGTTTGGGGCCCGGGAACCCTGGACAGGGTTTGCGATGCTCTTGCCTGAATAGAATGGAAGGTGACTaGTGCTGCTGGTGGAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: AGLGPGNPGQGLRCSCLNRMEGD*CCWWKS Trigger: ACTTTTCCACCAGCAGCATCAGTCACCTTCCATTCT...ATTCAGGCAAGAGCATCGCAAACCCTGTCCAGGGTTCCCGGGCCCCAAACCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCCAGGCCAGCCAGAGCTACCTGGACAGGGTTTGCGATGCTCTTGCCTGAATCCTGAGAATGGAAGGTaGCTGATGCTGCTGGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: VPGQPELPGQGLRCSCLNPENGR*LMLLVE Trigger: TTCCACCAGCAGCATCAGTCACCTTCCATTCTCAGG...ATTCAGGCAAGAGCATCGCAAACCCTGTCCAGGTAGCTCTGGCTGGCCTGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129038.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTACCTGGACAGGAAGCTGCACACCTGCTATCTGGTCTGGGGCAGCTTTGGTCCTGAGAATGGAAGGTaGCTGATGCTGCTGGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: WYLDRKLHTCYLVWGSFGPENGR*LMLLVE Trigger: TTCCACCAGCAGCATCAGTCACCTTCCATTCTCAGG...ACCAAAGCTGCCCCAGACCAGATAGCAGGTGTGCAGCTTCCTGTCCAGGTACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR-3UTR TCA 90 bp | CACTTCAGAGGAAAGGCAGGTAGGTTTCTGTGGGTTTGGAGACAACCCGGTCTACTCCCGAGGAAGCCCTaGGAATGGAAGGTGACTGAT | + |
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Preference number: 2 (lower is better) Translates to: HFRGKAGRFLWVWRQPGLLPRKP*EWKVTD Trigger: ATCAGTCACCTTCCATTCTCAGGGCTTCCTCGGGAG...TAGACCGGGTTGTCTCCAAACCCACAGAAACCTACCTGCCTTTCCTCTGAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129038.2 ENSMUST00000148483.8 |
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| 3UTR-3UTR CCA 90 bp | CGGTGTTTGGTACCTGGACAGGAAGCTGCACACCTGCTATCTGGTCTGGGGCAGAGGTTTCTGTGGGTTTaGAGACAACCCGGTCTAAAT | + |
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Preference number: 2 (lower is better) Translates to: RCLVPGQEAAHLLSGLGQRFLWV*RQPGLN Trigger: ATTTAGACCGGGTTGTCTCCAAACCCACAGAAACCT...CTGCCCCAGACCAGATAGCAGGTGTGCAGCTTCCTGTCCAGGTACCAAACACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR-3UTR TCA 90 bp | CAACCCGGTCTAAATGCTGAGTTCCAGGCCAGCCAGAGCTACCTCTCGGAGCTCATCCTCAAGAAGTCTTaGCTCATTTGTCTCAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: QPGLNAEFQASQSYLSELILKKS*LICLSC Trigger: GCAACTGAGACAAATGAGTCAAGACTTCTTGAGGAT...GAGCTCCGAGAGGTAGCTCTGGCTGGCCTGGAACTCAGCATTTAGACCGGGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR-3UTR TCA 90 bp | CCACTCTGTCTCATTTGGAATGTCTCCTTTAACCCTAGCACTTCAGAGGAAAGGACCCGGTCTAAATGCTaGGTTCCAGGCCAGCCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: PLCLIWNVSFNPSTSEERTRSKC*VPGQPE Trigger: CTCTGGCTGGCCTGGAACTCAGCATTTAGACCGGGT...CCTTTCCTCTGAAGTGCTAGGGTTAAAGGAGACATTCCAAATGAGACAGAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129038.2 ENSMUST00000148483.8 |
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| 3UTR CAA 90 bp | CTTGGTAGCCATGGAATAAGTCTTATGTTCAACCACCTCTTTAGGTaGCAACTGAGCAGGAGCCTCTGCCGGTCTCTCTCCTCCTTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: LGSHGISLMFNHLFR*QLSRSLCRSLSSFL Trigger: AAGGAAGGAGGAGAGAGACCGGCAGAGGCTCCTGCTCAGTTGCAACCTAAAGAGGTGGTTGAACATAAGACTTATTCCATGGCTACCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCCACTCTGTCTCATTTGGAATGTCTCCTTTAACCCTAGCACTTCAGAGGAAGCAGGTAGGTTTCTGTaGGTTTGGAGACAACCCGGT | + |
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Preference number: 2 (lower is better) Translates to: APLCLIWNVSFNPSTSEEAGRFL*VWRQPG Trigger: ACCGGGTTGTCTCCAAACCCACAGAAACCTACCTGC...TTCCTCTGAAGTGCTAGGGTTAAAGGAGACATTCCAAATGAGACAGAGTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129038.2 ENSMUST00000148483.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCAGCCCCACTCTGTCTCATTTGGAATGTCTCCTTTAACCCTAGCACTTCAGGCAGGTAGGTTTCTGTaGGTTTGGAGACAACCCGGT | + |
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Preference number: 2 (lower is better) Translates to: LQPHSVSFGMSPLTLALQAGRFL*VWRQPG Trigger: ACCGGGTTGTCTCCAAACCCACAGAAACCTACCTGC...CTGAAGTGCTAGGGTTAAAGGAGACATTCCAAATGAGACAGAGTGGGGCTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129038.2 ENSMUST00000148483.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGAAAGGCAGGTAGGTTTCTGTGGGTTTGGAGACAACCCGGTCTAAATGCTAGAATGGAAGGTGACTaGTGCTGCTGGTGGAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: RGKAGRFLWVWRQPGLNARMEGD*CCWWKS Trigger: ACTTTTCCACCAGCAGCATCAGTCACCTTCCATTCT...AGCATTTAGACCGGGTTGTCTCCAAACCCACAGAAACCTACCTGCCTTTCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129038.2 ENSMUST00000148483.8 |
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| 3UTR-3UTR GCA 90 bp | CTCACCCACACTCCTCAAAAATGTCTGGATAGTGCCGAAAGAGCACTGGTGGATGTGGATCCATTGGTGTaGTTTCACTGCGAACTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LTHTPQKCLDSAERALVDVDPLV*FHCELP Trigger: AGGAAGTTCGCAGTGAAAGCACACCAATGGATCCAC...ATCCACCAGTGCTCTTTCGGCACTATCCAGACATTTTTGAGGAGTGTGGGTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR CAA 90 bp | AAGTTTACAAGAGATCCTCAAGAAGTCTTGACTCATTTGTCTCAGTaGCCAAGTTCATGTTCAACTCCAGGCTCCGGACCTCCAGACGGA | + |
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Preference number: 2 (lower is better) Translates to: KFTRDPQEVLTHLSQ*PSSCSTPGSGPPDG Trigger: TCCGTCTGGAGGTCCGGAGCCTGGAGTTGAACATGAACTTGGCAACTGAGACAAATGAGTCAAGACTTCTTGAGGATCTCTTGTAAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106300.2 ENSMUST00000148483.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCAGCCCCACTCTGTCTCATTTGGAATGTCTCCTTTAACCCTAGCACTTCAGAGGTTTCTGTGGGTTTaGAGACAACCCGGTCTAAAT | + |
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Preference number: 2 (lower is better) Translates to: LQPHSVSFGMSPLTLALQRFLWV*RQPGLN Trigger: ATTTAGACCGGGTTGTCTCCAAACCCACAGAAACCT...CTGAAGTGCTAGGGTTAAAGGAGACATTCCAAATGAGACAGAGTGGGGCTGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129038.2 ENSMUST00000148483.8 |
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| 3UTR CCA 72 bp | GGCCTTCGGCCGCGGCGACCCCCTGAGCAGGAACGGTaGATCCATTGGTGTGCTTTCACTGCGAACTTCCTC | + |
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Preference number: 3 (lower is better) Translates to: GLRPRRPPEQER*IHWCAFTANFL Trigger: GAGGAAGTTCGCAGTGAAAGCACACCAATGGATCCACCGTTCCTGCTCAGGGGGTCGCCGCGGCCGAAGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR GCA 72 bp | CCAGGCCAGCCAGAGCTACCTGGACAGGGTTTGCGATaGTCTTGCCTGAATGGAGACTCCCGAGGAAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: PGQPELPGQGLR*SCLNGDSRGSP Trigger: AGGGCTTCCTCGGGAGTCTCCATTCAGGCAAGAGCATCGCAAACCCTGTCCAGGTAGCTCTGGCTGGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129038.2 |
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| 3UTR CCA 72 bp | TTTGGTACCTGGACAGGAAGCTGCACACCTGCTATCTaGTCTGGGGCAGCTTTGGTAGGTGGCTGTGCCCCT | + |
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Preference number: 3 (lower is better) Translates to: FGTWTGSCTPAI*SGAALVGGCAP Trigger: AGGGGCACAGCCACCTACCAAAGCTGCCCCAGACCAGATAGCAGGTGTGCAGCTTCCTGTCCAGGTACCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR GCA 72 bp | ATCGGTGTTTGGTACCTGGACAGGAAGCTGCACACCTaGTATCTGGTCTGGGGCAGCTTTGGTAGGTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: IGVWYLDRKLHT*YLVWGSFGRWL Trigger: CAGCCACCTACCAAAGCTGCCCCAGACCAGATAGCAGGTGTGCAGCTTCCTGTCCAGGTACCAAACACCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR TCA 72 bp | GTTTCTGTGGGTTTGGAGACAACCCGGTCTAAATGCTaGGTTCCAGGCCAGCCAGAGCTACCTGGACAGGGT | + |
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Preference number: 3 (lower is better) Translates to: VSVGLETTRSKC*VPGQPELPGQG Trigger: ACCCTGTCCAGGTAGCTCTGGCTGGCCTGGAACTCAGCATTTAGACCGGGTTGTCTCCAAACCCACAGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129038.2 |
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| 3UTR GCA 72 bp | CTGGTCTGGGGCAGCTTTGGTAGGTGGCTGTGCCCCTaGAGAGGACTTGGTAGCCATGGAATAAGTCTTATG | + |
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Preference number: 3 (lower is better) Translates to: LVWGSFGRWLCP*RGLGSHGISLM Trigger: CATAAGACTTATTCCATGGCTACCAAGTCCTCTGCAGGGGCACAGCCACCTACCAAAGCTGCCCCAGACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR GCA 72 bp | TGCTATCTGGTCTGGGGCAGCTTTGGTAGGTGGCTGTaGCCCTGCAGAGGACTTGGTAGCCATGGAATAAGT | + |
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Preference number: 3 (lower is better) Translates to: CYLVWGSFGRWL*PCRGLGSHGIS Trigger: ACTTATTCCATGGCTACCAAGTCCTCTGCAGGGGCACAGCCACCTACCAAAGCTGCCCCAGACCAGATAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR CCA 72 bp | CGGCCATTCAACTCACCCACACTCCTCAAAAATGTCTaGATAGTGCCGAAAGAGCACTGGTGGATCCCGGTC | + |
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Preference number: 3 (lower is better) Translates to: RPFNSPTLLKNV*IVPKEHWWIPV Trigger: GACCGGGATCCACCAGTGCTCTTTCGGCACTATCCAGACATTTTTGAGGAGTGTGGGTGAGTTGAATGGCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR CCA 72 bp | CACTTCAGAGGAAAGGCAGGTAGGTTTCTGTGGGTTTaGAGACAACCCGGTCTAAATGCTGAGTTCCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: HFRGKAGRFLWV*RQPGLNAEFQA Trigger: GGCCTGGAACTCAGCATTTAGACCGGGTTGTCTCCAAACCCACAGAAACCTACCTGCCTTTCCTCTGAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129038.2 ENSMUST00000148483.8 |
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| 3UTR-3UTR CAA 90 bp | CTCACCCACACTCCTCAAAAATGTCTGGATAGTGCCGAAAGAGCACTGGTGGATAACCACCTCTTTAGGTaGCAACTGAGCAGGAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: LTHTPQKCLDSAERALVDNHLFR*QLSRSL Trigger: GAGGCTCCTGCTCAGTTGCAACCTAAAGAGGTGGTT...ATCCACCAGTGCTCTTTCGGCACTATCCAGACATTTTTGAGGAGTGTGGGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR-3UTR CAA 90 bp | CTGTGGGTTTGGAGACAACCCGGTCTAAATGCTGAGTTCCAGGCCAGCCAGAGCACTCATTTGTCTCAGTaGCCAAGTTCATGTTCAACT | + |
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Preference number: 3 (lower is better) Translates to: LWVWRQPGLNAEFQASQSTHLSQ*PSSCST Trigger: AGTTGAACATGAACTTGGCAACTGAGACAAATGAGT...GCTCTGGCTGGCCTGGAACTCAGCATTTAGACCGGGTTGTCTCCAAACCCACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR-3UTR CAA 90 bp | CCACTCTGTCTCATTTGGAATGTCTCCTTTAACCCTAGCACTTCAGAGGAAAGGGATCCTCAAGAAGTCTaGACTCATTTGTCTCAGTTG | + |
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Preference number: 3 (lower is better) Translates to: PLCLIWNVSFNPSTSEERDPQEV*THLSQL Trigger: CAACTGAGACAAATGAGTCAAGACTTCTTGAGGATC...CCTTTCCTCTGAAGTGCTAGGGTTAAAGGAGACATTCCAAATGAGACAGAGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| CDS-3UTR TCA 90 bp | GCTGGTTTGGGGCCCGGGAACCCTGGACAGGGTTTGCGATGCTCTTGCCTGAATCATCGGAACCAGCAGTaGGGCCGGGGGTGGCGCCAT | + |
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Preference number: 4 (lower is better) Translates to: AGLGPGNPGQGLRCSCLNHRNQQ*GRGWRH Trigger: ATGGCGCCACCCCCGGCCTCACTGCTGGTTCCGATG...ATTCAGGCAAGAGCATCGCAAACCCTGTCCAGGGTTCCCGGGCCCCAAACCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| CDS-3UTR TCA 90 bp | GTTCCAGGCCAGCCAGAGCTACCTGGACAGGGTTTGCGATGCTCTTGCCTGAATACTGCAACTCCCCGGTaGACCCCCAGGAGGATGGGG | + |
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Preference number: 4 (lower is better) Translates to: VPGQPELPGQGLRCSCLNTATPR*TPRRMG Trigger: CCCCATCCTCCTGGGGGTTCACCGGGGAGTTGCAGT...ATTCAGGCAAGAGCATCGCAAACCCTGTCCAGGTAGCTCTGGCTGGCCTGGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129038.2 |
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| CDS-3UTR TCA 90 bp | CCGGACCTCCAGACGGAGGCGGCCATTCAACTCACCCACACTCCTCAAAAATGTACTGCAACTCCCCGGTaGACCCCCAGGAGGATGGGG | + |
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Preference number: 4 (lower is better) Translates to: PDLQTEAAIQLTHTPQKCTATPR*TPRRMG Trigger: CCCCATCCTCCTGGGGGTTCACCGGGGAGTTGCAGT...ACATTTTTGAGGAGTGTGGGTGAGTTGAATGGCCGCCTCCGTCTGGAGGTCCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| 3UTR CAA 72 bp | GGAAGCTGCACACCTGCTATCTGGTCTGGGGCAGCTTaGGTAGGTGGCTGTGCCCCTGCAGAGGACTTGGTA | + |
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Preference number: 4 (lower is better) Translates to: GSCTPAIWSGAA*VGGCAPAEDLV Trigger: TACCAAGTCCTCTGCAGGGGCACAGCCACCTACCAAAGCTGCCCCAGACCAGATAGCAGGTGTGCAGCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| CDS-3UTR CCA 90 bp | CAAGAAGTCTTGACTCATTTGTCTCAGTTGCCAAGTTCATGTTCAACTCCAGGCCCCTCCTCAGGATCCTaGGCGGCGGGGCTCCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: QEVLTHLSQLPSSCSTPGPSSGS*AAGLQA Trigger: GGCTTGGAGCCCCGCCGCCCAGGATCCTGAGGAGGG...GCCTGGAGTTGAACATGAACTTGGCAACTGAGACAAATGAGTCAAGACTTCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106300.2 |
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| CDS-3UTR TCA 90 bp | TACAAGTTTACAAGAGATCCTCAAGAAGTCTTGACTCATTTGTCTCAGTTGCCACTCCAGGCACAGCCCTaGTCCCAGGCCTTCGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: YKFTRDPQEVLTHLSQLPLQAQP*SQAFGR Trigger: GCGGCCGAAGGCCTGGGATCAGGGCTGTGCCTGGAG...TGGCAACTGAGACAAATGAGTCAAGACTTCTTGAGGATCTCTTGTAAACTTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106300.2 |
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| CDS-3UTR TCA 90 bp | TACAAGTTTACAAGAGATCCTCAAGAAGTCTTGACTCATTTGTCTCAGTTGCCACATCGGAACCAGCAGTaGGGCCGGGGGTGGCGCCAT | + |
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Preference number: 4 (lower is better) Translates to: YKFTRDPQEVLTHLSQLPHRNQQ*GRGWRH Trigger: ATGGCGCCACCCCCGGCCTCACTGCTGGTTCCGATG...TGGCAACTGAGACAAATGAGTCAAGACTTCTTGAGGATCTCTTGTAAACTTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000106300.2 ENSMUST00000148483.8 |
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| CDS-3UTR CCA 90 bp | TACAAGTTTACAAGAGATCCTCAAGAAGTCTTGACTCATTTGTCTCAGTTGCCACCGGTCACCTCGGACTaGGGCTCCAGGCACAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: YKFTRDPQEVLTHLSQLPPVTSD*GSRHSP Trigger: AGGGCTGTGCCTGGAGCCCCAGTCCGAGGTGACCGG...TGGCAACTGAGACAAATGAGTCAAGACTTCTTGAGGATCTCTTGTAAACTTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106300.2 |
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| CDS-3UTR CCA 90 bp | CAAGAAGTCTTGACTCATTTGTCTCAGTTGCCAAGTTCATGTTCAACTCCAGGCGTGCCGAAAGAGCACTaGTGGATCCCGGTCACCTCG | + |
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Preference number: 4 (lower is better) Translates to: QEVLTHLSQLPSSCSTPGVPKEH*WIPVTS Trigger: CGAGGTGACCGGGATCCACCAGTGCTCTTTCGGCAC...GCCTGGAGTTGAACATGAACTTGGCAACTGAGACAAATGAGTCAAGACTTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106300.2 |
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| CDS-3UTR GCA 90 bp | TTACAAGTTTACAAGAGATCCTCAAGAAGTCTTGACTCATTTGTCTCAGTTGCCGGTCGCTCACCAGAGTaGATGCGCCGGTGGCTGACC | + |
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Preference number: 4 (lower is better) Translates to: LQVYKRSSRSLDSFVSVAGRSPE*MRRWLT Trigger: GGTCAGCCACCGGCGCATGCACTCTGGTGAGCGACC...GGCAACTGAGACAAATGAGTCAAGACTTCTTGAGGATCTCTTGTAAACTTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106300.2 |
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| 3UTR CAA 72 bp | CATGGAATAAGTCTTATGTTCAACCACCTCTTTAGGTaGCAACTGAGCAGGAGCCTCTGCCGGTCTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: HGISLMFNHLFR*QLSRSLCRSLS Trigger: GGAGAGAGACCGGCAGAGGCTCCTGCTCAGTTGCAACCTAAAGAGGTGGTTGAACATAAGACTTATTCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148483.8 |
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| CDS-3UTR GCA 90 bp | CAAGAAGTCTTGACTCATTTGTCTCAGTTGCCAAGTTCATGTTCAACTCCAGGCTTTGGTAGGTGGCTGTaGCCCTGCAGAGGACTTGGT | + |
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Preference number: 4 (lower is better) Translates to: QEVLTHLSQLPSSCSTPGFGRWL*PCRGLG Trigger: ACCAAGTCCTCTGCAGGGGCACAGCCACCTACCAAA...GCCTGGAGTTGAACATGAACTTGGCAACTGAGACAAATGAGTCAAGACTTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106300.2 |
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| CDS-3UTR CCA 90 bp | TACAAGTTTACAAGAGATCCTCAAGAAGTCTTGACTCATTTGTCTCAGTTGCCAGCGTACACCACACTCTaGGCAGGGGAAGGGTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: YKFTRDPQEVLTHLSQLPAYTTL*AGEGSL Trigger: GAGCGACCCTTCCCCTGCCCAGAGTGTGGTGTACGC...TGGCAACTGAGACAAATGAGTCAAGACTTCTTGAGGATCTCTTGTAAACTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106300.2 |
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| CDS-3UTR TCA 90 bp | TTACAAGTTTACAAGAGATCCTCAAGAAGTCTTGACTCATTTGTCTCAGTTGCCGCATGCGCCGGTGGCTaGCCAGCAAAGATGGATAGG | + |
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Preference number: 4 (lower is better) Translates to: LQVYKRSSRSLDSFVSVAACAGG*PAKMDR Trigger: CCTATCCATCTTTGCTGGTCAGCCACCGGCGCATGC...GGCAACTGAGACAAATGAGTCAAGACTTCTTGAGGATCTCTTGTAAACTTGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106300.2 |
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| CDS-3UTR GCA 90 bp | CAAGAAGTCTTGACTCATTTGTCTCAGTTGCCAAGTTCATGTTCAACTCCAGGCTCTCTCCTCCTTCCTTaGAGCCCCACTCTGTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: QEVLTHLSQLPSSCSTPGSLLLP*SPTLSH Trigger: ATGAGACAGAGTGGGGCTGCAAGGAAGGAGGAGAGA...GCCTGGAGTTGAACATGAACTTGGCAACTGAGACAAATGAGTCAAGACTTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106300.2 |
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| CDS-3UTR CCA 90 bp | TACAAGTTTACAAGAGATCCTCAAGAAGTCTTGACTCATTTGTCTCAGTTGCCAGGCAGCTTTGGTAGGTaGCTGTGCCCCTGCAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: YKFTRDPQEVLTHLSQLPGSFGR*LCPCRG Trigger: TCCTCTGCAGGGGCACAGCCACCTACCAAAGCTGCC...TGGCAACTGAGACAAATGAGTCAAGACTTCTTGAGGATCTCTTGTAAACTTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106300.2 |
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| CDS-3UTR CCA 90 bp | TACAAGTTTACAAGAGATCCTCAAGAAGTCTTGACTCATTTGTCTCAGTTGCCACCGAAAGAGCACTGGTaGATCCCGGTCACCTCGGAC | + |
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Preference number: 4 (lower is better) Translates to: YKFTRDPQEVLTHLSQLPPKEHW*IPVTSD Trigger: GTCCGAGGTGACCGGGATCCACCAGTGCTCTTTCGG...TGGCAACTGAGACAAATGAGTCAAGACTTCTTGAGGATCTCTTGTAAACTTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106300.2 |
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| CDS-3UTR GCA 90 bp | TTACAAGTTTACAAGAGATCCTCAAGAAGTCTTGACTCATTTGTCTCAGTTGCCAGGTGGCTGTGCCCCTaGAGAGGACTTGGTAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LQVYKRSSRSLDSFVSVARWLCP*RGLGSH Trigger: ATGGCTACCAAGTCCTCTGCAGGGGCACAGCCACCT...GGCAACTGAGACAAATGAGTCAAGACTTCTTGAGGATCTCTTGTAAACTTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106300.2 |
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| CDS-3UTR CCA 90 bp | TTACAAGTTTACAAGAGATCCTCAAGAAGTCTTGACTCATTTGTCTCAGTTGCCGAGTGCATGCGCCGGTaGCTGACCAGCAAAGATGGA | + |
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Preference number: 4 (lower is better) Translates to: LQVYKRSSRSLDSFVSVAECMRR*LTSKDG Trigger: TCCATCTTTGCTGGTCAGCCACCGGCGCATGCACTC...GGCAACTGAGACAAATGAGTCAAGACTTCTTGAGGATCTCTTGTAAACTTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106300.2 |
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| 3UTR CAA 72 bp | AGAGATCCTCAAGAAGTCTTGACTCATTTGTCTCAGTaGCCAAGTTCATGTTCAACTCCAGGCTCCGGACCT | + |
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Preference number: 4 (lower is better) Translates to: RDPQEVLTHLSQ*PSSCSTPGSGP Trigger: AGGTCCGGAGCCTGGAGTTGAACATGAACTTGGCAACTGAGACAAATGAGTCAAGACTTCTTGAGGATCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106300.2 ENSMUST00000148483.8 |
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| CDS-3UTR TCA 90 bp | TACAAGTTTACAAGAGATCCTCAAGAAGTCTTGACTCATTTGTCTCAGTTGCCACTGCGAACTTCCTCTTaGAGCGTACACCACACTCTG | + |
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Preference number: 4 (lower is better) Translates to: YKFTRDPQEVLTHLSQLPLRTSS*SVHHTL Trigger: CAGAGTGTGGTGTACGCTTCAAGAGGAAGTTCGCAG...TGGCAACTGAGACAAATGAGTCAAGACTTCTTGAGGATCTCTTGTAAACTTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106300.2 |
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| CDS-3UTR CCA 90 bp | TACAAGTTTACAAGAGATCCTCAAGAAGTCTTGACTCATTTGTCTCAGTTGCCAGAACGGTGGATCCATTaGTGTGCTTTCACTGCGAAC | + |
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Preference number: 4 (lower is better) Translates to: YKFTRDPQEVLTHLSQLPERWIH*CAFTAN Trigger: GTTCGCAGTGAAAGCACACCAATGGATCCACCGTTC...TGGCAACTGAGACAAATGAGTCAAGACTTCTTGAGGATCTCTTGTAAACTTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106300.2 |
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| CDS-3UTR GCA 90 bp | TACAAGTTTACAAGAGATCCTCAAGAAGTCTTGACTCATTTGTCTCAGTTGCCATTGGTGTGCTTTCACTaGGAACTTCCTCTTGAAGCG | + |
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Preference number: 4 (lower is better) Translates to: YKFTRDPQEVLTHLSQLPLVCFH*ELPLEA Trigger: CGCTTCAAGAGGAAGTTCGCAGTGAAAGCACACCAA...TGGCAACTGAGACAAATGAGTCAAGACTTCTTGAGGATCTCTTGTAAACTTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106300.2 |
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| CDS-3UTR GCA 90 bp | TTACAAGTTTACAAGAGATCCTCAAGAAGTCTTGACTCATTTGTCTCAGTTGCCGTGGATCCATTGGTGTaGTTTCACTGCGAACTTCCT | + |
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Preference number: 4 (lower is better) Translates to: LQVYKRSSRSLDSFVSVAVDPLV*FHCELP Trigger: AGGAAGTTCGCAGTGAAAGCACACCAATGGATCCAC...GGCAACTGAGACAAATGAGTCAAGACTTCTTGAGGATCTCTTGTAAACTTGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106300.2 |
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| CDS-3UTR CAA 90 bp | CAAGAAGTCTTGACTCATTTGTCTCAGTTGCCAAGTTCATGTTCAACTCCAGGCTGGTCTGGGGCAGCTTaGGTAGGTGGCTGTGCCCCT | + |
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Preference number: 5 (lower is better) Translates to: QEVLTHLSQLPSSCSTPGWSGAA*VGGCAP Trigger: AGGGGCACAGCCACCTACCAAAGCTGCCCCAGACCA...GCCTGGAGTTGAACATGAACTTGGCAACTGAGACAAATGAGTCAAGACTTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106300.2 |
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| CDS-3UTR CAA 90 bp | CAAGAAGTCTTGACTCATTTGTCTCAGTTGCCAAGTTCATGTTCAACTCCAGGCAACCACCTCTTTAGGTaGCAACTGAGCAGGAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: QEVLTHLSQLPSSCSTPGNHLFR*QLSRSL Trigger: GAGGCTCCTGCTCAGTTGCAACCTAAAGAGGTGGTT...GCCTGGAGTTGAACATGAACTTGGCAACTGAGACAAATGAGTCAAGACTTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106300.2 |
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| CDS-3UTR CAA 90 bp | CAAGAAGTCTTGACTCATTTGTCTCAGTTGCCAAGTTCATGTTCAACTCCAGGCGGAACGGTGGATCCATaGGTGTGCTTTCACTGCGAA | + |
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Preference number: 5 (lower is better) Translates to: QEVLTHLSQLPSSCSTPGGTVDP*VCFHCE Trigger: TTCGCAGTGAAAGCACACCAATGGATCCACCGTTCC...GCCTGGAGTTGAACATGAACTTGGCAACTGAGACAAATGAGTCAAGACTTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106300.2 |
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| CDS-3UTR CAA 90 bp | TTACAAGTTTACAAGAGATCCTCAAGAAGTCTTGACTCATTTGTCTCAGTTGCCCCCACTCTGTCTCATTaGGAATGTCTCCTCTCGGAG | + |
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Preference number: 5 (lower is better) Translates to: LQVYKRSSRSLDSFVSVAPTLSH*ECLLSE Trigger: CTCCGAGAGGAGACATTCCAAATGAGACAGAGTGGG...GGCAACTGAGACAAATGAGTCAAGACTTCTTGAGGATCTCTTGTAAACTTGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106300.2 |
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| CDS-3UTR CAA 90 bp | TTACAAGTTTACAAGAGATCCTCAAGAAGTCTTGACTCATTTGTCTCAGTTGCCACTGCGAACTTCCTCTaGAAGCGTACACCACACTCT | + |
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Preference number: 5 (lower is better) Translates to: LQVYKRSSRSLDSFVSVATANFL*KRTPHS Trigger: AGAGTGTGGTGTACGCTTCAAGAGGAAGTTCGCAGT...GGCAACTGAGACAAATGAGTCAAGACTTCTTGAGGATCTCTTGTAAACTTGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106300.2 |
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