Pregenerated sensors for ZFP68 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058291Ensembl transcript IDs: ENSMUST00000063262.11, ENSMUST00000085852.11, ENSMUST00000110905.9
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTCCCCAAACACCCAACAATGAGTTCCAAATTGCATTCAGAGTTTaGGGCACTCCTCACTTTCGCTGGTTTCACACCCCTGGGTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: CPQTPNNEFQIAFRV*GTPHFRWFHTPGFW Trigger: CCAGAACCCAGGGGTGTGAAACCAGCGAAAGTGAGGAGTGCCCCAAACTCTGAATGCAATTTGGAACTCATTGTTGGGTGTTTGGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| 3UTR TCA 90 bp | ATTTATGTCAACCACAAATGCCCCAGAATGGAGGTCAACTTATGCTaGCTGGGAATGACCATCCTGCTTGTTCATACACAACTGCTGAAT | + |
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Preference number: 1 (lower is better) Translates to: IYVNHKCPRMEVNLC*LGMTILLVHTQLLN Trigger: ATTCAGCAGTTGTGTATGAACAAGCAGGATGGTCATTCCCAGTCAGCATAAGTTGACCTCCATTCTGGGGCATTTGTGGTTGACATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
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| 3UTR TCA 90 bp | AGCTGTAAAATCAGATCTTTCATTTGCTCAATTTGTGTGTGTGTGTaGGACACACTGATGGGGTATTTAGAACATGAACATAGTATCCAG | + |
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Preference number: 1 (lower is better) Translates to: SCKIRSFICSICVCV*DTLMGYLEHEHSIQ Trigger: CTGGATACTATGTTCATGTTCTAAATACCCCATCAGTGTGTCTCACACACACACACAAATTGAGCAAATGAAAGATCTGATTTTACAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
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| 3UTR TCA 90 bp | TTACCATCATTTCTCTTGATGTCAAGAGATTTGCCATCCCTTCACTaGGCTGTAAAATCAGATCTTTCATTTGCTCAATTTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: LPSFLLMSRDLPSLH*AVKSDLSFAQFVCV Trigger: CACACACACAAATTGAGCAAATGAAAGATCTGATTTTACAGCTCAGTGAAGGGATGGCAAATCTCTTGACATCAAGAGAAATGATGGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
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| 3UTR CCA 90 bp | CCTAAAATAAATATTTACACCCTGAAACTGGTTCTGTCAGATAGCTaGTCACAGCAATACCAAGTTAAATCATACAACCACAGTGATTTA | + |
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Preference number: 1 (lower is better) Translates to: PKINIYTLKLVLSDS*SQQYQVKSYNHSDL Trigger: TAAATCACTGTGGTTGTATGATTTAACTTGGTATTGCTGTGACCAGCTATCTGACAGAACCAGTTTCAGGGTGTAAATATTTATTTTAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
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| 3UTR-3UTR TCA 90 bp | CTTGCTAACCCTCTCGCCGACCATGACCTATCCATGGGAAGGGGGTCAAGTAACGCATTCTGGACTAGGTaGAAATACCTCCAGAATTAC | + |
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Preference number: 2 (lower is better) Translates to: LANPLADHDLSMGRGSSNAFWTR*KYLQNY Trigger: GTAATTCTGGAGGTATTTTCACCTAGTCCAGAATGC...GTTACTTGACCCCCTTCCCATGGATAGGTCATGGTCGGCGAGAGGGTTAGCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
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| 3UTR CAA 90 bp | GCTCAGAGAGTAAAGATGTTTTCTGCCAAGCCTGATAACCTGCGTTaGATACTAAGAACCCGCCAGGTAGAAGAGAACTGGCCTTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: AQRVKMFSAKPDNLR*ILRTRQVEENWPWD Trigger: ATCCCAAGGCCAGTTCTCTTCTACCTGGCGGGTTCTTAGTATCAAACGCAGGTTATCAGGCTTGGCAGAAAACATCTTTACTCTCTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGGACTTTGCTATCAGCCAAAGCATTTGTGCCAAGACCTTATCTGCAAGCGTGCTGTGGAGTGCATaGACAGATAAAGCCTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: KEDFAISQSICAKTLSASVLWSA*TDKASK Trigger: CTTAGAGGCTTTATCTGTGCATGCACTCCACAGCAC...GCTTGCAGATAAGGTCTTGGCACAAATGCTTTGGCTGATAGCAAAGTCCTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| 3UTR-3UTR TCA 90 bp | CCAACAATGAGTTCCAAATTGCATTCAGAGTTTGGGGCACTCCTCACTTTCGCTTTGCCTGAGTGCAAGTaGTCCTCTACCATAAACATC | + |
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Preference number: 2 (lower is better) Translates to: PTMSSKLHSEFGALLTFALPECK*SSTINI Trigger: GATGTTTATGGTAGAGGATCACTTGCACTCAGGCAA...AGCGAAAGTGAGGAGTGCCCCAAACTCTGAATGCAATTTGGAACTCATTGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| 3UTR-3UTR GCA 90 bp | AGAACCCGCCAGGTAGAAGAGAACTGGCCTTGGGATTTGTCCTCTGACCTTGATCCTCTTTCTTCACCCTaGCAAATATTAAGATTACAG | + |
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Preference number: 2 (lower is better) Translates to: RTRQVEENWPWDLSSDLDPLSSP*QILRLQ Trigger: CTGTAATCTTAATATTTGGCAGGGTGAAGAAAGAGG...ATCAAGGTCAGAGGACAAATCCCAAGGCCAGTTCTCTTCTACCTGGCGGGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| 3UTR-3UTR GCA 90 bp | GGTCAACTTATGCTGACTGGGAATGACCATCCTGCTTGTTCATACACAACTGCTTGCCAAGACCTTATCTaGAAGCTGAAGTTAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: GQLMLTGNDHPACSYTTACQDLI*KLKLGR Trigger: TCTCCCTAACTTCAGCTTGCAGATAAGGTCTTGGCA...AGCAGTTGTGTATGAACAAGCAGGATGGTCATTCCCAGTCAGCATAAGTTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
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| 3UTR-3UTR CCA 90 bp | ACTTTGCTATCAGCCAAAGCATTTGTGCCAAGACCTTATCTGCAAGCTGAAGTTGAAGAGAACTGGCCTTaGGATTTGTCCTCTGACCTT | + |
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Preference number: 2 (lower is better) Translates to: TLLSAKAFVPRPYLQAEVEENWP*DLSSDL Trigger: AAGGTCAGAGGACAAATCCCAAGGCCAGTTCTCTTC...AACTTCAGCTTGCAGATAAGGTCTTGGCACAAATGCTTTGGCTGATAGCAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| 3UTR-3UTR TCA 90 bp | TCACCTCTTTCTTCACCCTGCCAAATATTAAGATTACAGGCATGTCCCCAAACATTGCCTGAGTGCAAGTaGTCCTCTACCATAAACATC | + |
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Preference number: 2 (lower is better) Translates to: SPLSSPCQILRLQACPQTLPECK*SSTINI Trigger: GATGTTTATGGTAGAGGATCACTTGCACTCAGGCAA...TGTTTGGGGACATGCCTGTAATCTTAATATTTGGCAGGGTGAAGAAAGAGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| 3UTR-3UTR CCA 90 bp | TCACTATCAACTTTCATTTATGTCAACCACAAATGCCCCAGAATGGAGGTCAACGAAGAGAACTGGCCTTaGGATTTGTCCTCTGACCTT | + |
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Preference number: 2 (lower is better) Translates to: SLSTFIYVNHKCPRMEVNEENWP*DLSSDL Trigger: AAGGTCAGAGGACAAATCCCAAGGCCAGTTCTCTTC...GTTGACCTCCATTCTGGGGCATTTGTGGTTGACATAAATGAAAGTTGATAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
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| 3UTR-3UTR TCA 90 bp | CTAGATTCCAGTATCACTATCAACTTTCATTTATGTCAACCACAAATGCCCCAGATTTGTGTGTGTGTGTaGGACACACTGATGGGGTAT | + |
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Preference number: 2 (lower is better) Translates to: LDSSITINFHLCQPQMPQICVCV*DTLMGY Trigger: ATACCCCATCAGTGTGTCTCACACACACACACAAAT...CTGGGGCATTTGTGGTTGACATAAATGAAAGTTGATAGTGATACTGGAATCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGGACTTTGCTATCAGCCAAAGCATTTGTGCCAAGACCTTATCTGCAAGCGTAAGATCTGACCTTTaGATAAGTGTTTTCCAATCA | + |
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Preference number: 2 (lower is better) Translates to: KEDFAISQSICAKTLSASVRSDL*ISVFQS Trigger: TGATTGGAAAACACTTATCCAAAGGTCAGATCTTAC...GCTTGCAGATAAGGTCTTGGCACAAATGCTTTGGCTGATAGCAAAGTCCTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| 3UTR-3UTR GCA 90 bp | ATACGTTGCTGTTGTATATCGTTAAAAAGTAAACCTGGTACTCAGCCACTTCTTTTTAATGTTAAACAGTaGTTGCTAACCCTCTCGCCG | + |
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Preference number: 2 (lower is better) Translates to: IRCCCISLKSKPGTQPLLFNVKQ*LLTLSP Trigger: CGGCGAGAGGGTTAGCAAGCACTGTTTAACATTAAA...AAGAAGTGGCTGAGTACCAGGTTTACTTTTTAACGATATACAACAGCAACGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTAAATTATCTGCCACAGTCAATTGTGAGTTCTTTGATAAACAAACAAAGGTAAGATCTGACCTTTaGATAAGTGTTTTCCAATCA | + |
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Preference number: 2 (lower is better) Translates to: LAKLSATVNCEFFDKQTKVRSDL*ISVFQS Trigger: TGATTGGAAAACACTTATCCAAAGGTCAGATCTTAC...CTTTGTTTGTTTATCAAAGAACTCACAATTGACTGTGGCAGATAATTTAGCCAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| 3UTR-3UTR CAA 90 bp | CTTGCTAACCCTCTCGCCGACCATGACCTATCCATGGGAAGGGGGTCAAGTAACTACCCCAGGCTGGGTTaGAAATTGCTTTGTAGCAAA | + |
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Preference number: 3 (lower is better) Translates to: LANPLADHDLSMGRGSSNYPRLG*KLLCSK Trigger: TTTGCTACAAAGCAATTTCAAACCCAGCCTGGGGTA...GTTACTTGACCCCCTTCCCATGGATAGGTCATGGTCGGCGAGAGGGTTAGCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
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| 3UTR-3UTR CAA 90 bp | AGAACCCGCCAGGTAGAAGAGAACTGGCCTTGGGATTTGTCCTCTGACCTTGATTACCCCAGGCTGGGTTaGAAATTGCTTTGTAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: RTRQVEENWPWDLSSDLDYPRLG*KLLCSK Trigger: TTTGCTACAAAGCAATTTCAAACCCAGCCTGGGGTA...ATCAAGGTCAGAGGACAAATCCCAAGGCCAGTTCTCTTCTACCTGGCGGGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| 3UTR CCA 72 bp | ACACCCAACAATGAGTTCCAAATTGCATTCAGAGTTTaGGGCACTCCTCACTTTCGCTGGTTTCACACCCCT | + |
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Preference number: 3 (lower is better) Translates to: TPNNEFQIAFRV*GTPHFRWFHTP Trigger: AGGGGTGTGAAACCAGCGAAAGTGAGGAGTGCCCCAAACTCTGAATGCAATTTGGAACTCATTGTTGGGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| 3UTR CCA 72 bp | ATACTAAGAACCCGCCAGGTAGAAGAGAACTGGCCTTaGGATTTGTCCTCTGACCTTGATCTATGTGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: ILRTRQVEENWP*DLSSDLDLCAV Trigger: CACAGCACATAGATCAAGGTCAGAGGACAAATCCCAAGGCCAGTTCTCTTCTACCTGGCGGGTTCTTAGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| 3UTR GCA 72 bp | GGATCTGAAATGTTCCCTGAAGGCTTATGTATCGGATaGTTGATTCTCCAATGGTGGCAATACTCTAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: GSEMFPEGLCIG*LILQWWQYSRR Trigger: CCTCCTAGAGTATTGCCACCATTGGAGAATCAAGCATCCGATACATAAGCCTTCAGGGAACATTTCAGATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
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| 3UTR-3UTR CAA 90 bp | ACTTTGCTATCAGCCAAAGCATTTGTGCCAAGACCTTATCTGCAAGCTGAAGTTAACTGGCCTTGGGATTaGTCCTCTGACCTTGATCTA | + |
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Preference number: 3 (lower is better) Translates to: TLLSAKAFVPRPYLQAEVNWPWD*SSDLDL Trigger: TAGATCAAGGTCAGAGGACAAATCCCAAGGCCAGTT...AACTTCAGCTTGCAGATAAGGTCTTGGCACAAATGCTTTGGCTGATAGCAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| 3UTR-3UTR CAA 90 bp | AGGAGGACTTTGCTATCAGCCAAAGCATTTGTGCCAAGACCTTATCTGCAAGCTAGAAAACTGCCCTATTaGTTCTTAAATCACGGTGTC | + |
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Preference number: 3 (lower is better) Translates to: RRTLLSAKAFVPRPYLQARKLPY*FLNHGV Trigger: GACACCGTGATTTAAGAACAAATAGGGCAGTTTTCT...AGCTTGCAGATAAGGTCTTGGCACAAATGCTTTGGCTGATAGCAAAGTCCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| 3UTR-3UTR CAA 90 bp | CCAACAATGAGTTCCAAATTGCATTCAGAGTTTGGGGCACTCCTCACTTTCGCTAGAAAACTGCCCTATTaGTTCTTAAATCACGGTGTC | + |
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Preference number: 3 (lower is better) Translates to: PTMSSKLHSEFGALLTFARKLPY*FLNHGV Trigger: GACACCGTGATTTAAGAACAAATAGGGCAGTTTTCT...AGCGAAAGTGAGGAGTGCCCCAAACTCTGAATGCAATTTGGAACTCATTGTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| 3UTR-3UTR CAA 90 bp | TCCTTCCCAGTAGAGCATTCTGGACTAGGTGAAAATACCTCCAGAATTACTTGTATTTGTCCTCTGACCTaGATCTATGTGCTGTGGAGT | + |
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Preference number: 3 (lower is better) Translates to: SFPVEHSGLGENTSRITCICPLT*IYVLWS Trigger: ACTCCACAGCACATAGATCAAGGTCAGAGGACAAAT...ACAAGTAATTCTGGAGGTATTTTCACCTAGTCCAGAATGCTCTACTGGGAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| 3UTR GCA 72 bp | AGGTTAGACTACAACTCCTCACCTCTTTCTTCACCCTaGCAAATATTAAGATTACAGGCATGTCCCCAAACA | + |
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Preference number: 3 (lower is better) Translates to: RLDYNSSPLSSP*QILRLQACPQT Trigger: TGTTTGGGGACATGCCTGTAATCTTAATATTTGGCAGGGTGAAGAAAGAGGTGAGGAGTTGTAGTCTAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| 3UTR-3UTR CAA 90 bp | CTAGATTCCAGTATCACTATCAACTTTCATTTATGTCAACCACAAATGCCCCAGACAATGAGTTCCAAATaGCATTCAGAGTTTGGGGCA | + |
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Preference number: 3 (lower is better) Translates to: LDSSITINFHLCQPQMPQTMSSK*HSEFGA Trigger: TGCCCCAAACTCTGAATGCAATTTGGAACTCATTGT...CTGGGGCATTTGTGGTTGACATAAATGAAAGTTGATAGTGATACTGGAATCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
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| 3UTR TCA 72 bp | GCAAACTTTGAAATTTCCCATTACCATCATTTCTCTTaGTGTCAAGAGATTTGCCATCCCTTCACTGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: ANFEISHYHHFS*CQEICHPFTEL Trigger: CAGCTCAGTGAAGGGATGGCAAATCTCTTGACATCAAGAGAAATGATGGTAATGGGAAATTTCAAAGTTTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
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| 3UTR CCA 72 bp | AATATTTACACCCTGAAACTGGTTCTGTCAGATAGCTaGTCACAGCAATACCAAGTTAAATCATACAACCAC | + |
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Preference number: 3 (lower is better) Translates to: NIYTLKLVLSDS*SQQYQVKSYNH Trigger: GTGGTTGTATGATTTAACTTGGTATTGCTGTGACCAGCTATCTGACAGAACCAGTTTCAGGGTGTAAATATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
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| 3UTR TCA 72 bp | ATCAGATCTTTCATTTGCTCAATTTGTGTGTGTGTGTaGGACACACTGATGGGGTATTTAGAACATGAACAT | + |
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Preference number: 3 (lower is better) Translates to: IRSFICSICVCV*DTLMGYLEHEH Trigger: ATGTTCATGTTCTAAATACCCCATCAGTGTGTCTCACACACACACACAAATTGAGCAAATGAAAGATCTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
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| 3UTR TCA 72 bp | TTTCTCTTGATGTCAAGAGATTTGCCATCCCTTCACTaGGCTGTAAAATCAGATCTTTCATTTGCTCAATTT | + |
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Preference number: 3 (lower is better) Translates to: FLLMSRDLPSLH*AVKSDLSFAQF Trigger: AAATTGAGCAAATGAAAGATCTGATTTTACAGCTCAGTGAAGGGATGGCAAATCTCTTGACATCAAGAGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
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| 3UTR CCA 72 bp | ACAAAGATCAAGGTTTTCCTTCACCGTTTATTCATTTaGTTTAATCCCTTGAATAAGTGCTCCAATGTACAG | + |
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Preference number: 3 (lower is better) Translates to: TKIKVFLHRLFI*FNPLNKCSNVQ Trigger: CTGTACATTGGAGCACTTATTCAAGGGATTAAACCAAATGAATAAACGGTGAAGGAAAACCTTGATCTTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| 3UTR GCA 72 bp | AAAAAGGCCATGTACCCTACCTCTTTGGTCTCTCGATaGATTTGTTTCATTACATATATTACAAATTTCATG | + |
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Preference number: 3 (lower is better) Translates to: KKAMYPTSLVSR*ICFITYITNFM Trigger: CATGAAATTTGTAATATATGTAATGAAACAAATGCATCGAGAGACCAAAGAGGTAGGGTACATGGCCTTTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
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| 3UTR CCA 72 bp | ACTATGAACATAAAAAGGCCATGTACCCTACCTCTTTaGTCTCTCGATGCATTTGTTTCATTACATATATTA | + |
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Preference number: 3 (lower is better) Translates to: TMNIKRPCTLPL*SLDAFVSLHIL Trigger: TAATATATGTAATGAAACAAATGCATCGAGAGACCAAAGAGGTAGGGTACATGGCCTTTTTATGTTCATAGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
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| 3UTR CAA 72 bp | AGAACCCGCCAGGTAGAAGAGAACTGGCCTTGGGATTaGTCCTCTGACCTTGATCTATGTGCTGTGGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: RTRQVEENWPWD*SSDLDLCAVEC Trigger: GCACTCCACAGCACATAGATCAAGGTCAGAGGACAAATCCCAAGGCCAGTTCTCTTCTACCTGGCGGGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS-3UTR GCA 90 bp | AGAACCCGCCAGGTAGAAGAGAACTGGCCTTGGGATTTGTCCTCTGACCTTGATCCTTCATTCAGGTCCTaGCATTCCTGCCAGGTGAAT | + |
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Preference number: 4 (lower is better) Translates to: RTRQVEENWPWDLSSDLDPSFRS*HSCQVN Trigger: ATTCACCTGGCAGGAATGGCAGGACCTGAATGAAGG...ATCAAGGTCAGAGGACAAATCCCAAGGCCAGTTCTCTTCTACCTGGCGGGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
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| CDS-3UTR TCA 90 bp | GCACTCACAAAGCTGAGGCAAGATAAGGAGGACTTTGCTATCAGCCAAAGCATTCTTGCTCGGGGTGTGTaGCAGATTCTGCAGTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: ALTKLRQDKEDFAISQSILARGV*QILQFH Trigger: ATGGAACTGCAGAATCTGTCACACACCCCGAGCAAG...AATGCTTTGGCTGATAGCAAAGTCCTCCTTATCTTGCCTCAGCTTTGTGAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS-3UTR GCA 90 bp | CACCCCTGGGTTCTGGTAGTCAGGAGAACCTCAAGTAGAAAACTGCCCTATTTGGGTTTGGTTTTGCAGTaGCCCAAGAACAGCAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: HPWVLVVRRTSSRKLPYLGLVLQ*PKNSKL Trigger: CAACTTGCTGTTCTTGGGGCACTGCAAAACCAAACC...CAAATAGGGCAGTTTTCTACTTGAGGTTCTCCTGACTACCAGAACCCAGGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| 3UTR CAA 72 bp | AGGCATGTCCCCAAACACCCAACAATGAGTTCCAAATaGCATTCAGAGTTTGGGGCACTCCTCACTTTCGCT | + |
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Preference number: 4 (lower is better) Translates to: RHVPKHPTMSSK*HSEFGALLTFA Trigger: AGCGAAAGTGAGGAGTGCCCCAAACTCTGAATGCAATTTGGAACTCATTGTTGGGTGTTTGGGGACATGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS-3UTR TCA 90 bp | TCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGCTTGCTCGGGGTGTGTaGCAGATTCTGCAGTTCCAT | + |
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Preference number: 4 (lower is better) Translates to: SDLWISVFQSQGPLSCKKLARGV*QILQFH Trigger: ATGGAACTGCAGAATCTGTCACACACCCCGAGCAAG...CTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS-3UTR CCA 90 bp | AGAACCCGCCAGGTAGAAGAGAACTGGCCTTGGGATTTGTCCTCTGACCTTGATACACGTGTCTTGCTTTaGTATCTGGACTGCTCTTAT | + |
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Preference number: 4 (lower is better) Translates to: RTRQVEENWPWDLSSDLDTRVLL*YLDCSY Trigger: ATAAGAGCAGTCCAGATACCAAAGCAAGACACGTGT...ATCAAGGTCAGAGGACAAATCCCAAGGCCAGTTCTCTTCTACCTGGCGGGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS-3UTR TCA 90 bp | TCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGTCCAGCCAACTCCTTTaGTGTTTCACTGTTGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: SDLWISVFQSQGPLSCKKSSQLL*CFTVEG Trigger: GCCCTCAACAGTGAAACATCAAAGGAGTTGGCTGGA...CTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS-3UTR TCA 90 bp | CACCCCTGGGTTCTGGTAGTCAGGAGAACCTCAAGTAGAAAACTGCCCTATTTGTTCGCTGATGTACAATaGGGTGTGAAGTGCAGTAAA | + |
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Preference number: 4 (lower is better) Translates to: HPWVLVVRRTSSRKLPYLFADVQ*GVKCSK Trigger: TTTACTGCACTTCACACCTCATTGTACATCAGCGAA...CAAATAGGGCAGTTTTCTACTTGAGGTTCTCCTGACTACCAGAACCCAGGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS-3UTR GCA 90 bp | AGATCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGCCTTCATTCAGGTCCTaGCATTCCTGCCAGGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RSDLWISVFQSQGPLSCKPSFRS*HSCQVN Trigger: ATTCACCTGGCAGGAATGGCAGGACCTGAATGAAGG...CTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063262.11 ENSMUST00000110905.9 |
||
| CDS-3UTR GCA 90 bp | CAAACACCCAACAATGAGTTCCAAATTGCATTCAGAGTTTGGGGCACTCCTCACGGTTTGGTTTTGCAGTaGCCCAAGAACAGCAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QTPNNEFQIAFRVWGTPHGLVLQ*PKNSKL Trigger: CAACTTGCTGTTCTTGGGGCACTGCAAAACCAAACC...GTGAGGAGTGCCCCAAACTCTGAATGCAATTTGGAACTCATTGTTGGGTGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR GCA 90 bp | TCCTTCCCAGTAGAGCATTCTGGACTAGGTGAAAATACCTCCAGAATTACTTGTGCTCCGGTTTGGTTTTaGAGTGCCCCAAGAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFPVEHSGLGENTSRITCAPVWF*SAPRTA Trigger: TGCTGTTCTTGGGGCACTGCAAAACCAAACCGGAGC...ACAAGTAATTCTGGAGGTATTTTCACCTAGTCCAGAATGCTCTACTGGGAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CCA 90 bp | CACCCCTGGGTTCTGGTAGTCAGGAGAACCTCAAGTAGAAAACTGCCCTATTTGACACGTGTCTTGCTTTaGTATCTGGACTGCTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: HPWVLVVRRTSSRKLPYLTRVLL*YLDCSY Trigger: ATAAGAGCAGTCCAGATACCAAAGCAAGACACGTGT...CAAATAGGGCAGTTTTCTACTTGAGGTTCTCCTGACTACCAGAACCCAGGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR TCA 90 bp | TCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGAGCTATATCCTCAAATaGCACCAGCCCCATTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SDLWISVFQSQGPLSCKKSYILK*HQPHFW Trigger: CCAGAAATGGGGCTGGTGTCATTTGAGGATATAGCT...CTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063262.11 ENSMUST00000110905.9 |
||
| CDS-3UTR GCA 90 bp | TCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGGGTTTGGTTTTGCAGTaGCCCAAGAACAGCAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SDLWISVFQSQGPLSCKKGLVLQ*PKNSKL Trigger: CAACTTGCTGTTCTTGGGGCACTGCAAAACCAAACC...CTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR TCA 90 bp | GTTAGACTACAACTCCTCACCTCTTTCTTCACCCTGCCAAATATTAAGATTACACTTGCTCGGGGTGTGTaGCAGATTCTGCAGTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VRLQLLTSFFTLPNIKITLARGV*QILQFH Trigger: ATGGAACTGCAGAATCTGTCACACACCCCGAGCAAG...TGTAATCTTAATATTTGGCAGGGTGAAGAAAGAGGTGAGGAGTTGTAGTCTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR TCA 90 bp | AGGAGGACTTTGCTATCAGCCAAAGCATTTGTGCCAAGACCTTATCTGCAAGCTCTCACTTCTGACTGCTaGGAAAACTCATATTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRTLLSAKAFVPRPYLQALTSDC*ENSYSF Trigger: GAAGGAATATGAGTTTTCTCAGCAGTCAGAAGTGAG...AGCTTGCAGATAAGGTCTTGGCACAAATGCTTTGGCTGATAGCAAAGTCCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR TCA 90 bp | AGGAGGACTTTGCTATCAGCCAAAGCATTTGTGCCAAGACCTTATCTGCAAGCTTTCGCTGATGTACAATaGGGTGTGAAGTGCAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: RRTLLSAKAFVPRPYLQAFADVQ*GVKCSK Trigger: TTTACTGCACTTCACACCTCATTGTACATCAGCGAA...AGCTTGCAGATAAGGTCTTGGCACAAATGCTTTGGCTGATAGCAAAGTCCTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CCA 90 bp | CACCCCTGGGTTCTGGTAGTCAGGAGAACCTCAAGTAGAAAACTGCCCTATTTGGTTGAAGGATTTCCCTaGTATCAGACTTTGAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HPWVLVVRRTSSRKLPYLVEGFP*YQTLKV Trigger: TACTTTCAAAGTCTGATACCAGGGAAATCCTTCAAC...CAAATAGGGCAGTTTTCTACTTGAGGTTCTCCTGACTACCAGAACCCAGGGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCCCAAACACCCAACAATGAGTTCCAAATTGCATTCAGAGTTTGGGGCACTTTCAAAGCATATGTATaGTCTCTCGCCTGTGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CPQTPNNEFQIAFRVWGTFKAYV*SLACVN Trigger: GTTCACACAGGCGAGAGACCATACATATGCTTTGAA...AGTGCCCCAAACTCTGAATGCAATTTGGAACTCATTGTTGGGTGTTTGGGGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR TCA 90 bp | GTTAGACTACAACTCCTCACCTCTTTCTTCACCCTGCCAAATATTAAGATTACATCCAGCCAACTCCTTTaGTGTTTCACTGTTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VRLQLLTSFFTLPNIKITSSQLL*CFTVEG Trigger: GCCCTCAACAGTGAAACATCAAAGGAGTTGGCTGGA...TGTAATCTTAATATTTGGCAGGGTGAAGAAAGAGGTGAGGAGTTGTAGTCTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR TCA 90 bp | AGGAGGACTTTGCTATCAGCCAAAGCATTTGTGCCAAGACCTTATCTGCAAGCTCTTGATAGTCTGATCTaGAATATGGTTTGTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RRTLLSAKAFVPRPYLQALDSLI*NMVCAH Trigger: GTGAGCACAAACCATATTTCAGATCAGACTATCAAG...AGCTTGCAGATAAGGTCTTGGCACAAATGCTTTGGCTGATAGCAAAGTCCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR TCA 90 bp | CAAACACCCAACAATGAGTTCCAAATTGCATTCAGAGTTTGGGGCACTCCTCACATACTGCTTTTGTGTTaGAGGATTTCCCTGGTATCA | + |
|
Preference number: 4 (lower is better) Translates to: QTPNNEFQIAFRVWGTPHILLLC*RISLVS Trigger: TGATACCAGGGAAATCCTTCAACACAAAAGCAGTAT...GTGAGGAGTGCCCCAAACTCTGAATGCAATTTGGAACTCATTGTTGGGTGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR TCA 90 bp | AGGACTTTGCTATCAGCCAAAGCATTTGTGCCAAGACCTTATCTGCAAGCTGAACTCACTTCTGACTGCTaGGAAAACTCATATTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTLLSAKAFVPRPYLQAELTSDC*ENSYSF Trigger: GAAGGAATATGAGTTTTCTCAGCAGTCAGAAGTGAG...TTCAGCTTGCAGATAAGGTCTTGGCACAAATGCTTTGGCTGATAGCAAAGTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR TCA 90 bp | AGGAGGACTTTGCTATCAGCCAAAGCATTTGTGCCAAGACCTTATCTGCAAGCTATGAAGACTCACTTCTaGCTGCTGAGAAAACTCATA | + |
|
Preference number: 4 (lower is better) Translates to: RRTLLSAKAFVPRPYLQAMKTHF*LLRKLI Trigger: TATGAGTTTTCTCAGCAGTCAGAAGTGAGTCTTCAT...AGCTTGCAGATAAGGTCTTGGCACAAATGCTTTGGCTGATAGCAAAGTCCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR TCA 90 bp | TCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGTTCGCTGATGTACAATaGGGTGTGAAGTGCAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SDLWISVFQSQGPLSCKKFADVQ*GVKCSK Trigger: TTTACTGCACTTCACACCTCATTGTACATCAGCGAA...CTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR GCA 90 bp | CTTCACCGTTTATTCATTTGGTTTAATCCCTTGAATAAGTGCTCCAATGTACAGGCTCCGGTTTGGTTTTaGAGTGCCCCAAGAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHRLFIWFNPLNKCSNVQAPVWF*SAPRTA Trigger: TGCTGTTCTTGGGGCACTGCAAAACCAAACCGGAGC...CTGTACATTGGAGCACTTATTCAAGGGATTAAACCAAATGAATAAACGGTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR GCA 90 bp | AGATCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGCTTTGGTATCTGGACTaGTCTTATTCAGGGTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSDLWISVFQSQGPLSCKLWYLD*SYSGYS Trigger: TGAGTACCCTGAATAAGAGCAGTCCAGATACCAAAG...CTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGGACTTTGCTATCAGCCAAAGCATTTGTGCCAAGACCTTATCTGCAAGCTTGTTTCTCTCCCATGTaGGTGGGTTCATTTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: RRTLLSAKAFVPRPYLQACFSPM*VGSFSL Trigger: TAATGAAAATGAACCCACGCACATGGGAGAGAAACA...AGCTTGCAGATAAGGTCTTGGCACAAATGCTTTGGCTGATAGCAAAGTCCTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CCA 90 bp | GACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGAATAGGGTACTCATATTCTaGAAATCTGGGACACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: DLWISVFQSQGPLSCKKNRVLIF*KSGTHW Trigger: CCAGTGTGTCCCAGATTTCCAGAATATGAGTACCCT...ATTCTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CCA 90 bp | TCACCTCTTTCTTCACCCTGCCAAATATTAAGATTACAGGCATGTCCCCAAACAAGGGTACTCATATTCTaGAAATCTGGGACACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPLSSPCQILRLQACPQTRVLIF*KSGTHW Trigger: CCAGTGTGTCCCAGATTTCCAGAATATGAGTACCCT...TGTTTGGGGACATGCCTGTAATCTTAATATTTGGCAGGGTGAAGAAAGAGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTGCTATCAGCCAAAGCATTTGTGCCAAGACCTTATCTGCAAGCTGAAGTTAGGGTACTCATATTCTaGAAATCTGGGACACACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLLSAKAFVPRPYLQAEVRVLIF*KSGTHW Trigger: CCAGTGTGTCCCAGATTTCCAGAATATGAGTACCCT...AACTTCAGCTTGCAGATAAGGTCTTGGCACAAATGCTTTGGCTGATAGCAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CCA 90 bp | TCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGTCTTGCTTTGGTATCTaGACTGCTCTTATTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SDLWISVFQSQGPLSCKKSCFGI*TALIQG Trigger: ACCCTGAATAAGAGCAGTCCAGATACCAAAGCAAGA...CTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CCA 90 bp | AGATCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGACACGTGTCTTGCTTTaGTATCTGGACTGCTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RSDLWISVFQSQGPLSCKTRVLL*YLDCSY Trigger: ATAAGAGCAGTCCAGATACCAAAGCAAGACACGTGT...CTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| 3UTR CAA 72 bp | GTAGTCAGGAGAACCTCAAGTAGAAAACTGCCCTATTaGTTCTTAAATCACGGTGTCTTCCTCTATTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VVRRTSSRKLPY*FLNHGVFLYCL Trigger: CAGGCAATAGAGGAAGACACCGTGATTTAAGAACAAATAGGGCAGTTTTCTACTTGAGGTTCTCCTGACTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR TCA 90 bp | CTTCACCGTTTATTCATTTGGTTTAATCCCTTGAATAAGTGCTCCAATGTACAGTCCAGCCAACTCCTTTaGTGTTTCACTGTTGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LHRLFIWFNPLNKCSNVQSSQLL*CFTVEG Trigger: GCCCTCAACAGTGAAACATCAAAGGAGTTGGCTGGA...CTGTACATTGGAGCACTTATTCAAGGGATTAAACCAAATGAATAAACGGTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR TCA 90 bp | TCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGATACTGCTTTTGTGTTaGAGGATTTCCCTGGTATCA | + |
|
Preference number: 4 (lower is better) Translates to: SDLWISVFQSQGPLSCKKILLLC*RISLVS Trigger: TGATACCAGGGAAATCCTTCAACACAAAAGCAGTAT...CTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR TCA 90 bp | AGATCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGATACTGCTTTTGTGTTaGAGGATTTCCCTGGTATCA | + |
|
Preference number: 4 (lower is better) Translates to: RSDLWISVFQSQGPLSCKILLLC*RISLVS Trigger: TGATACCAGGGAAATCCTTCAACACAAAAGCAGTAT...CTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR TCA 90 bp | GACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGAATCTCACTTCTGACTGCTaGGAAAACTCATATTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DLWISVFQSQGPLSCKKNLTSDC*ENSYSF Trigger: GAAGGAATATGAGTTTTCTCAGCAGTCAGAAGTGAG...ATTCTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR GCA 90 bp | CTGGCTAAATTATCTGCCACAGTCAATTGTGAGTTCTTTGATAAACAAACAAAGGCTCCGGTTTGGTTTTaGAGTGCCCCAAGAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LAKLSATVNCEFFDKQTKAPVWF*SAPRTA Trigger: TGCTGTTCTTGGGGCACTGCAAAACCAAACCGGAGC...CTTTGTTTGTTTATCAAAGAACTCACAATTGACTGTGGCAGATAATTTAGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR GCA 90 bp | GACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGAATCTTTGGTATCTGGACTaGTCTTATTCAGGGTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: DLWISVFQSQGPLSCKKNLWYLD*SYSGYS Trigger: TGAGTACCCTGAATAAGAGCAGTCCAGATACCAAAG...ATTCTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR GCA 90 bp | TCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGGTGTGTGACAGATTCTaGAGTTCCATTAAGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SDLWISVFQSQGPLSCKKVCDRF*SSIKIF Trigger: GAAGATCTTAATGGAACTGCAGAATCTGTCACACAC...CTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTGCTATCAGCCAAAGCATTTGTGCCAAGACCTTATCTGCAAGCTGAAGTTTCTTGCTTTGGTATCTaGACTGCTCTTATTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TLLSAKAFVPRPYLQAEVSCFGI*TALIQG Trigger: ACCCTGAATAAGAGCAGTCCAGATACCAAAGCAAGA...AACTTCAGCTTGCAGATAAGGTCTTGGCACAAATGCTTTGGCTGATAGCAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CCA 90 bp | GTTAGACTACAACTCCTCACCTCTTTCTTCACCCTGCCAAATATTAAGATTACATCATCAGCATCAGTGTaGAGATACACGTCCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VRLQLLTSFFTLPNIKITSSASV*RYTSFH Trigger: GTGGAAGGACGTGTATCTCCACACTGATGCTGATGA...TGTAATCTTAATATTTGGCAGGGTGAAGAAAGAGGTGAGGAGTTGTAGTCTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CCA 90 bp | GCACTCACAAAGCTGAGGCAAGATAAGGAGGACTTTGCTATCAGCCAAAGCATTAACTCATATTCCTTCTaGATAAAGAGCTTCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: ALTKLRQDKEDFAISQSINSYSF*IKSFSC Trigger: GCATGAGAAGCTCTTTATCCAGAAGGAATATGAGTT...AATGCTTTGGCTGATAGCAAAGTCCTCCTTATCTTGCCTCAGCTTTGTGAGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CCA 90 bp | AGGAGGACTTTGCTATCAGCCAAAGCATTTGTGCCAAGACCTTATCTGCAAGCTAACTCATATTCCTTCTaGATAAAGAGCTTCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RRTLLSAKAFVPRPYLQANSYSF*IKSFSC Trigger: GCATGAGAAGCTCTTTATCCAGAAGGAATATGAGTT...AGCTTGCAGATAAGGTCTTGGCACAAATGCTTTGGCTGATAGCAAAGTCCTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CCA 90 bp | GACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGAATTTCAAAGCATATGTATaGTCTCTCGCCTGTGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DLWISVFQSQGPLSCKKNFKAYV*SLACVN Trigger: GTTCACACAGGCGAGAGACCATACATATGCTTTGAA...ATTCTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| 3UTR CAA 72 bp | GGGTTGGTTGTTTACCGTGAAACTGCATATATTGACTaGGATCTGAAATGTTCCCTGAAGGCTTATGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: GLVVYRETAYID*DLKCSLKAYVS Trigger: CGATACATAAGCCTTCAGGGAACATTTCAGATCCAAGTCAATATATGCAGTTTCACGGTAAACAACCAACCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
||
| CDS-3UTR TCA 90 bp | ATACGTTGCTGTTGTATATCGTTAAAAAGTAAACCTGGTACTCAGCCACTTCTTAGCTATATCCTCAAATaGCACCAGCCCCATTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IRCCCISLKSKPGTQPLLSYILK*HQPHFW Trigger: CCAGAAATGGGGCTGGTGTCATTTGAGGATATAGCT...AAGAAGTGGCTGAGTACCAGGTTTACTTTTTAACGATATACAACAGCAACGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
||
| CDS-3UTR TCA 90 bp | GACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGAATATGAAGACTCACTTCTaGCTGCTGAGAAAACTCATA | + |
|
Preference number: 4 (lower is better) Translates to: DLWISVFQSQGPLSCKKNMKTHF*LLRKLI Trigger: TATGAGTTTTCTCAGCAGTCAGAAGTGAGTCTTCAT...ATTCTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR TCA 90 bp | TCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGTGCTCTGATGTCTATTaGAGCTGGTTTTCCAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SDLWISVFQSQGPLSCKKCSDVY*SWFSNK Trigger: TTTATTGGAAAACCAGCTTCAATAGACATCAGAGCA...CTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR TCA 90 bp | AACTCCTCACCTCTTTCTTCACCCTGCCAAATATTAAGATTACAGGCATGTCCCTGCTCTGATGTCTATTaGAGCTGGTTTTCCAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: NSSPLSSPCQILRLQACPCSDVY*SWFSNK Trigger: TTTATTGGAAAACCAGCTTCAATAGACATCAGAGCA...GGGACATGCCTGTAATCTTAATATTTGGCAGGGTGAAGAAAGAGGTGAGGAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR GCA 90 bp | GACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGAATGTGTGTGACAGATTCTaGAGTTCCATTAAGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DLWISVFQSQGPLSCKKNVCDRF*SSIKIF Trigger: GAAGATCTTAATGGAACTGCAGAATCTGTCACACAC...ATTCTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR GCA 90 bp | TCCTTCCCAGTAGAGCATTCTGGACTAGGTGAAAATACCTCCAGAATTACTTGTGTGTGTGACAGATTCTaGAGTTCCATTAAGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFPVEHSGLGENTSRITCVCDRF*SSIKIF Trigger: GAAGATCTTAATGGAACTGCAGAATCTGTCACACAC...ACAAGTAATTCTGGAGGTATTTTCACCTAGTCCAGAATGCTCTACTGGGAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR GCA 90 bp | GACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGAATTGTTTCTCTCCCATGTaGGTGGGTTCATTTTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: DLWISVFQSQGPLSCKKNCFSPM*VGSFSL Trigger: TAATGAAAATGAACCCACGCACATGGGAGAGAAACA...ATTCTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CCA 90 bp | CTTCACCGTTTATTCATTTGGTTTAATCCCTTGAATAAGTGCTCCAATGTACAGTCATCAGCATCAGTGTaGAGATACACGTCCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHRLFIWFNPLNKCSNVQSSASV*RYTSFH Trigger: GTGGAAGGACGTGTATCTCCACACTGATGCTGATGA...CTGTACATTGGAGCACTTATTCAAGGGATTAAACCAAATGAATAAACGGTGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CCA 90 bp | TCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGGTTGAAGGATTTCCCTaGTATCAGACTTTGAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SDLWISVFQSQGPLSCKKVEGFP*YQTLKV Trigger: TACTTTCAAAGTCTGATACCAGGGAAATCCTTCAAC...CTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CCA 90 bp | AGATCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGGTTGAAGGATTTCCCTaGTATCAGACTTTGAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RSDLWISVFQSQGPLSCKVEGFP*YQTLKV Trigger: TACTTTCAAAGTCTGATACCAGGGAAATCCTTCAAC...CTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CCA 90 bp | TCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGAACTCATATTCCTTCTaGATAAAGAGCTTCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SDLWISVFQSQGPLSCKKNSYSF*IKSFSC Trigger: GCATGAGAAGCTCTTTATCCAGAAGGAATATGAGTT...CTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR TCA 90 bp | TCCTTCCCAGTAGAGCATTCTGGACTAGGTGAAAATACCTCCAGAATTACTTGTTGCTCTGATGTCTATTaGAGCTGGTTTTCCAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFPVEHSGLGENTSRITCCSDVY*SWFSNK Trigger: TTTATTGGAAAACCAGCTTCAATAGACATCAGAGCA...ACAAGTAATTCTGGAGGTATTTTCACCTAGTCCAGAATGCTCTACTGGGAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR GCA 90 bp | GTTAGACTACAACTCCTCACCTCTTTCTTCACCCTGCCAAATATTAAGATTACACTTTGGTATCTGGACTaGTCTTATTCAGGGTACTCA | + |
|
Preference number: 4 (lower is better) Translates to: VRLQLLTSFFTLPNIKITLWYLD*SYSGYS Trigger: TGAGTACCCTGAATAAGAGCAGTCCAGATACCAAAG...TGTAATCTTAATATTTGGCAGGGTGAAGAAAGAGGTGAGGAGTTGTAGTCTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CCA 90 bp | TCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGAAGTTTGTTTTCTGGTaGAAAGCTTTCTTGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SDLWISVFQSQGPLSCKKKFVFW*KAFLHS Trigger: AGAATGCAAGAAAGCTTTCCACCAGAAAACAAACTT...CTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CCA 90 bp | CTTCACCGTTTATTCATTTGGTTTAATCCCTTGAATAAGTGCTCCAATGTACAGTTCAAAGCATATGTATaGTCTCTCGCCTGTGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LHRLFIWFNPLNKCSNVQFKAYV*SLACVN Trigger: GTTCACACAGGCGAGAGACCATACATATGCTTTGAA...CTGTACATTGGAGCACTTATTCAAGGGATTAAACCAAATGAATAAACGGTGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CCA 90 bp | ACTTTGCTATCAGCCAAAGCATTTGTGCCAAGACCTTATCTGCAAGCTGAAGTTAAGTTTGTTTTCTGGTaGAAAGCTTTCTTGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLLSAKAFVPRPYLQAEVKFVFW*KAFLHS Trigger: AGAATGCAAGAAAGCTTTCCACCAGAAAACAAACTT...AACTTCAGCTTGCAGATAAGGTCTTGGCACAAATGCTTTGGCTGATAGCAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR TCA 90 bp | CTTCACCGTTTATTCATTTGGTTTAATCCCTTGAATAAGTGCTCCAATGTACAGCTTGATAGTCTGATCTaGAATATGGTTTGTGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHRLFIWFNPLNKCSNVQLDSLI*NMVCAH Trigger: GTGAGCACAAACCATATTTCAGATCAGACTATCAAG...CTGTACATTGGAGCACTTATTCAAGGGATTAAACCAAATGAATAAACGGTGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR TCA 90 bp | CTTCACCGTTTATTCATTTGGTTTAATCCCTTGAATAAGTGCTCCAATGTACAGATGAAGACTCACTTCTaGCTGCTGAGAAAACTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LHRLFIWFNPLNKCSNVQMKTHF*LLRKLI Trigger: TATGAGTTTTCTCAGCAGTCAGAAGTGAGTCTTCAT...CTGTACATTGGAGCACTTATTCAAGGGATTAAACCAAATGAATAAACGGTGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CCA 90 bp | GTTAGACTACAACTCCTCACCTCTTTCTTCACCCTGCCAAATATTAAGATTACAAAGTTTGTTTTCTGGTaGAAAGCTTTCTTGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: VRLQLLTSFFTLPNIKITKFVFW*KAFLHS Trigger: AGAATGCAAGAAAGCTTTCCACCAGAAAACAAACTT...TGTAATCTTAATATTTGGCAGGGTGAAGAAAGAGGTGAGGAGTTGTAGTCTAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| 3UTR CAA 72 bp | TGGCTAAATTATCTGCCACAGTCAATTGTGAGTTCTTaGATAAACAAACAAAGATCAAGGTTTTCCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: WLNYLPQSIVSS*INKQRSRFSFT Trigger: GGTGAAGGAAAACCTTGATCTTTGTTTGTTTATCAAAGAACTCACAATTGACTGTGGCAGATAATTTAGCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| 3UTR CAA 72 bp | AACTATGAACATAAAAAGGCCATGTACCCTACCTCTTaGGTCTCTCGATGCATTTGTTTCATTACATATATT | + |
|
Preference number: 4 (lower is better) Translates to: NYEHKKAMYPTS*VSRCICFITYI Trigger: AATATATGTAATGAAACAAATGCATCGAGAGACCAAAGAGGTAGGGTACATGGCCTTTTTATGTTCATAGTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
||
| CDS TCA 90 bp | GGTGTGAGGCTTCTACAATCCATGACCCAAGTCTTTGCTCCAAATTaGAGATCAGCTCCGGTTTGGTTTTGCAGTGCCCCAAGAACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GVRLLQSMTQVFAPN*RSAPVWFCSAPRTA Trigger: TGCTGTTCTTGGGGCACTGCAAAACCAAACCGGAGCTGATCTTCAATTTGGAGCAAAGACTTGGGTCATGGATTGTAGAAGCCTCACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CAA 90 bp | AGATCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAGCTCCGGTTTGGTTTaGCAGTGCCCCAAGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSDLWISVFQSQGPLSCKSSGLV*QCPKNS Trigger: GCTGTTCTTGGGGCACTGCAAAACCAAACCGGAGCT...CTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS GCA 90 bp | CCTATTCCAGCCAACTCCTTTGATGTTTCACTGTTGAGGGCAACTTaGCACACGTGTCTTGCTTTGGTATCTGGACTGCTCTTATTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PIPANSFDVSLLRAT*HTCLALVSGLLLFR Trigger: CCTGAATAAGAGCAGTCCAGATACCAAAGCAAGACACGTGTGGCAAGTTGCCCTCAACAGTGAAACATCAAAGGAGTTGGCTGGAATAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CAA 90 bp | GACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGAATAGCTCCGGTTTGGTTTaGCAGTGCCCCAAGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: DLWISVFQSQGPLSCKKNSSGLV*QCPKNS Trigger: GCTGTTCTTGGGGCACTGCAAAACCAAACCGGAGCT...ATTCTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CAA 90 bp | TCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGCTTGCCACACGTGTCTaGCTTTGGTATCTGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SDLWISVFQSQGPLSCKKLATRV*LWYLDC Trigger: GCAGTCCAGATACCAAAGCAAGACACGTGTGGCAAG...CTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CAA 90 bp | AGATCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGCTTGCCACACGTGTCTaGCTTTGGTATCTGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSDLWISVFQSQGPLSCKLATRV*LWYLDC Trigger: GCAGTCCAGATACCAAAGCAAGACACGTGTGGCAAG...CTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CAA 90 bp | CACCCCTGGGTTCTGGTAGTCAGGAGAACCTCAAGTAGAAAACTGCCCTATTTGAAGTTGTTAGACTGTTaGCTCTCAGAGGCTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HPWVLVVRRTSSRKLPYLKLLDC*LSEAFF Trigger: GAAGAAAGCCTCTGAGAGCAAACAGTCTAACAACTT...CAAATAGGGCAGTTTTCTACTTGAGGTTCTCCTGACTACCAGAACCCAGGGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS TCA 90 bp | GTTTGTGCTCACATTGCAAGTATTCCCTATTCCAGCCAACTCCTTTaGTGTTTCACTGTTGAGGGCAACTTGCCACACGTGTCTTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VCAHIASIPYSSQLL*CFTVEGNLPHVSCF Trigger: AAAGCAAGACACGTGTGGCAAGTTGCCCTCAACAGTGAAACATCAAAGGAGTTGGCTGGAATAGGGAATACTTGCAATGTGAGCACAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS CCA 90 bp | CTGCTCTTATTCAGGGTACTCATATTCTGGAAATCTGGGACACACTaGTGTGAGGCTTCTACAATCCATGACCCAAGTCTTTGCTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLLFRVLIFWKSGTH*CEASTIHDPSLCSK Trigger: TTTGGAGCAAAGACTTGGGTCATGGATTGTAGAAGCCTCACACCAGTGTGTCCCAGATTTCCAGAATATGAGTACCCTGAATAAGAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS CCA 90 bp | CTTGCTTTGGTATCTGGACTGCTCTTATTCAGGGTACTCATATTCTaGAAATCTGGGACACACTGGTGTGAGGCTTCTACAATCCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: LALVSGLLLFRVLIF*KSGTHWCEASTIHD Trigger: GTCATGGATTGTAGAAGCCTCACACCAGTGTGTCCCAGATTTCCAGAATATGAGTACCCTGAATAAGAGCAGTCCAGATACCAAAGCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CAA 90 bp | TCACTATCAACTTTCATTTATGTCAACCACAAATGCCCCAGAATGGAGGTCAACCTTGCCACACGTGTCTaGCTTTGGTATCTGGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLSTFIYVNHKCPRMEVNLATRV*LWYLDC Trigger: GCAGTCCAGATACCAAAGCAAGACACGTGTGGCAAG...GTTGACCTCCATTCTGGGGCATTTGTGGTTGACATAAATGAAAGTTGATAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110905.9 |
||
| CDS-3UTR CAA 90 bp | TCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGAGTCTTTGCTCCAAATaGAAGATCAGCTCCGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SDLWISVFQSQGPLSCKKSLCSK*KISSGL Trigger: CAAACCGGAGCTGATCTTCAATTTGGAGCAAAGACT...CTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CAA 90 bp | AACTCCTCACCTCTTTCTTCACCCTGCCAAATATTAAGATTACAGGCATGTCCCAGTCTTTGCTCCAAATaGAAGATCAGCTCCGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NSSPLSSPCQILRLQACPSLCSK*KISSGL Trigger: CAAACCGGAGCTGATCTTCAATTTGGAGCAAAGACT...GGGACATGCCTGTAATCTTAATATTTGGCAGGGTGAAGAAAGAGGTGAGGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CAA 90 bp | GACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGAATCACACGTGTCTTGCTTaGGTATCTGGACTGCTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: DLWISVFQSQGPLSCKKNHTCLA*VSGLLL Trigger: TAAGAGCAGTCCAGATACCAAAGCAAGACACGTGTG...ATTCTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CAA 90 bp | AGATCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAGTAAGTTGGGGCTTTaGGCAAAAAGCTTTCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: RSDLWISVFQSQGPLSCKSKLGL*AKSFPT Trigger: TGTGGGAAAGCTTTTTGCCAAAAGCCCCAACTTACT...CTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CAA 90 bp | CTGGCTAAATTATCTGCCACAGTCAATTGTGAGTTCTTTGATAAACAAACAAAGAGCTCCGGTTTGGTTTaGCAGTGCCCCAAGAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LAKLSATVNCEFFDKQTKSSGLV*QCPKNS Trigger: GCTGTTCTTGGGGCACTGCAAAACCAAACCGGAGCT...CTTTGTTTGTTTATCAAAGAACTCACAATTGACTGTGGCAGATAATTTAGCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CAA 90 bp | AGGACTTTGCTATCAGCCAAAGCATTTGTGCCAAGACCTTATCTGCAAGCTGAATGGTTTGTGCTCACATaGCAAGTATTCCCTATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RTLLSAKAFVPRPYLQAEWFVLT*QVFPIP Trigger: TGGAATAGGGAATACTTGCAATGTGAGCACAAACCA...TTCAGCTTGCAGATAAGGTCTTGGCACAAATGCTTTGGCTGATAGCAAAGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CAA 90 bp | GACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGAATAGTAAGTTGGGGCTTTaGGCAAAAAGCTTTCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: DLWISVFQSQGPLSCKKNSKLGL*AKSFPT Trigger: TGTGGGAAAGCTTTTTGCCAAAAGCCCCAACTTACT...ATTCTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CAA 90 bp | GACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGAATTGGTTTGTGCTCACATaGCAAGTATTCCCTATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: DLWISVFQSQGPLSCKKNWFVLT*QVFPIP Trigger: TGGAATAGGGAATACTTGCAATGTGAGCACAAACCA...ATTCTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CAA 90 bp | GACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGAATAAGTTGTTAGACTGTTaGCTCTCAGAGGCTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DLWISVFQSQGPLSCKKNKLLDC*LSEAFF Trigger: GAAGAAAGCCTCTGAGAGCAAACAGTCTAACAACTT...ATTCTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CAA 90 bp | AGATCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGTCATTAAGGTCAGACTaGCTACAGTTTATCTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RSDLWISVFQSQGPLSCKSLRSD*LQFISD Trigger: ATCAGAGATAAACTGTAGCAAGTCTGACCTTAATGA...CTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CAA 90 bp | TCTGACCTTTGGATAAGTGTTTTCCAATCACAGGGTCCCCTTAGCTGTAAGAAGTCATTAAGGTCAGACTaGCTACAGTTTATCTCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SDLWISVFQSQGPLSCKKSLRSD*LQFISD Trigger: ATCAGAGATAAACTGTAGCAAGTCTGACCTTAATGA...CTTCTTACAGCTAAGGGGACCCTGTGATTGGAAAACACTTATCCAAAGGTCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CAA 90 bp | CTGGCTAAATTATCTGCCACAGTCAATTGTGAGTTCTTTGATAAACAAACAAAGCACACGTGTCTTGCTTaGGTATCTGGACTGCTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LAKLSATVNCEFFDKQTKHTCLA*VSGLLL Trigger: TAAGAGCAGTCCAGATACCAAAGCAAGACACGTGTG...CTTTGTTTGTTTATCAAAGAACTCACAATTGACTGTGGCAGATAATTTAGCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CAA 90 bp | CTTCACCGTTTATTCATTTGGTTTAATCCCTTGAATAAGTGCTCCAATGTACAGAGTAAGTTGGGGCTTTaGGCAAAAAGCTTTCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LHRLFIWFNPLNKCSNVQSKLGL*AKSFPT Trigger: TGTGGGAAAGCTTTTTGCCAAAAGCCCCAACTTACT...CTGTACATTGGAGCACTTATTCAAGGGATTAAACCAAATGAATAAACGGTGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS TCA 90 bp | CGTGGGTTCATTTTCATTAAGGTCAGACTTGCTACAGTTTATCTCTaGTACATTACATTCAAAGGATTTCACCCTTATCTGAGCCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: RGFIFIKVRLATVYL*YITFKGFHPYLSHL Trigger: GAGATGGCTCAGATAAGGGTGAAATCCTTTGAATGTAATGTATCAGAGATAAACTGTAGCAAGTCTGACCTTAATGAAAATGAACCCACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
||
| CDS-3UTR CAA 90 bp | GTAGAGCATTCTGGACTAGGTGAAAATACCTCCAGAATTACTTGTAACTTACAATGGTTTGTGCTCACATaGCAAGTATTCCCTATTCCA | + |
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Preference number: 5 (lower is better) Translates to: VEHSGLGENTSRITCNLQWFVLT*QVFPIP Trigger: TGGAATAGGGAATACTTGCAATGTGAGCACAAACCA...TTGTAAGTTACAAGTAATTCTGGAGGTATTTTCACCTAGTCCAGAATGCTCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS-3UTR CAA 90 bp | TACCATAAACATCGGTCTTATGTTGGGTTAATGTACCTGGCTAAATTATCTGCCTCATTAAGGTCAGACTaGCTACAGTTTATCTCTGAT | + |
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Preference number: 5 (lower is better) Translates to: YHKHRSYVGLMYLAKLSASLRSD*LQFISD Trigger: ATCAGAGATAAACTGTAGCAAGTCTGACCTTAATGA...GGCAGATAATTTAGCCAGGTACATTAACCCAACATAAGACCGATGTTTATGGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS-3UTR CAA 90 bp | CTGGCTAAATTATCTGCCACAGTCAATTGTGAGTTCTTTGATAAACAAACAAAGAAGTTGTTAGACTGTTaGCTCTCAGAGGCTTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LAKLSATVNCEFFDKQTKKLLDC*LSEAFF Trigger: GAAGAAAGCCTCTGAGAGCAAACAGTCTAACAACTT...CTTTGTTTGTTTATCAAAGAACTCACAATTGACTGTGGCAGATAATTTAGCCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS GCA 72 bp | GCCAACTCCTTTGATGTTTCACTGTTGAGGGCAACTTaGCACACGTGTCTTGCTTTGGTATCTGGACTGCTC | + |
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Preference number: 6 (lower is better) Translates to: ANSFDVSLLRAT*HTCLALVSGLL Trigger: GAGCAGTCCAGATACCAAAGCAAGACACGTGTGGCAAGTTGCCCTCAACAGTGAAACATCAAAGGAGTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS CAA 90 bp | TGGTGTGAGGCTTCTACAATCCATGACCCAAGTCTTTGCTCCAAATaGAAGATCAGCTCCGGTTTGGTTTTGCAGTGCCCCAAGAACAGC | + |
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Preference number: 6 (lower is better) Translates to: WCEASTIHDPSLCSK*KISSGLVLQCPKNS Trigger: GCTGTTCTTGGGGCACTGCAAAACCAAACCGGAGCTGATCTTCAATTTGGAGCAAAGACTTGGGTCATGGATTGTAGAAGCCTCACACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS CAA 72 bp | CCAAGTCTTTGCTCCAAATTGAAGATCAGCTCCGGTTaGGTTTTGCAGTGCCCCAAGAACAGCAAGTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: PSLCSKLKISSG*VLQCPKNSKLL Trigger: CAGCAACTTGCTGTTCTTGGGGCACTGCAAAACCAAACCGGAGCTGATCTTCAATTTGGAGCAAAGACTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS CAA 72 bp | GCTTCTACAATCCATGACCCAAGTCTTTGCTCCAAATaGAAGATCAGCTCCGGTTTGGTTTTGCAGTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: ASTIHDPSLCSK*KISSGLVLQCP Trigger: GGGGCACTGCAAAACCAAACCGGAGCTGATCTTCAATTTGGAGCAAAGACTTGGGTCATGGATTGTAGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS TCA 72 bp | CTTCTACAATCCATGACCCAAGTCTTTGCTCCAAATTaGAGATCAGCTCCGGTTTGGTTTTGCAGTGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: LLQSMTQVFAPN*RSAPVWFCSAP Trigger: TGGGGCACTGCAAAACCAAACCGGAGCTGATCTTCAATTTGGAGCAAAGACTTGGGTCATGGATTGTAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS TCA 72 bp | CACATTGCAAGTATTCCCTATTCCAGCCAACTCCTTTaGTGTTTCACTGTTGAGGGCAACTTGCCACACGTG | + |
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Preference number: 6 (lower is better) Translates to: HIASIPYSSQLL*CFTVEGNLPHV Trigger: CACGTGTGGCAAGTTGCCCTCAACAGTGAAACATCAAAGGAGTTGGCTGGAATAGGGAATACTTGCAATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS CCA 72 bp | GAGGGCAACTTGCCACACGTGTCTTGCTTTGGTATCTaGACTGCTCTTATTCAGGGTACTCATATTCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: EGNLPHVSCFGI*TALIQGTHILE Trigger: TTCCAGAATATGAGTACCCTGAATAAGAGCAGTCCAGATACCAAAGCAAGACACGTGTGGCAAGTTGCCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS CAA 72 bp | TCACTGTTGAGGGCAACTTGCCACACGTGTCTTGCTTaGGTATCTGGACTGCTCTTATTCAGGGTACTCATA | + |
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Preference number: 6 (lower is better) Translates to: SLLRATCHTCLA*VSGLLLFRVLI Trigger: TATGAGTACCCTGAATAAGAGCAGTCCAGATACCAAAGCAAGACACGTGTGGCAAGTTGCCCTCAACAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS CCA 72 bp | GTATCTGGACTGCTCTTATTCAGGGTACTCATATTCTaGAAATCTGGGACACACTGGTGTGAGGCTTCTACA | + |
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Preference number: 6 (lower is better) Translates to: VSGLLLFRVLIF*KSGTHWCEAST Trigger: TGTAGAAGCCTCACACCAGTGTGTCCCAGATTTCCAGAATATGAGTACCCTGAATAAGAGCAGTCCAGATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS GCA 72 bp | CAACTTGCCACACGTGTCTTGCTTTGGTATCTGGACTaGTCTTATTCAGGGTACTCATATTCTGGAAATCTG | + |
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Preference number: 6 (lower is better) Translates to: QLATRVLLWYLD*SYSGYSYSGNL Trigger: CAGATTTCCAGAATATGAGTACCCTGAATAAGAGCAGTCCAGATACCAAAGCAAGACACGTGTGGCAAGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS TCA 72 bp | TTTCCCTCTGCGGATTTTCTGATGAAGACTCACTTCTaGCTGCTGAGAAAACTCATATTCCTTCTGGATAAA | + |
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Preference number: 6 (lower is better) Translates to: FPSADFLMKTHF*LLRKLIFLLDK Trigger: TTTATCCAGAAGGAATATGAGTTTTCTCAGCAGTCAGAAGTGAGTCTTCATCAGAAAATCCGCAGAGGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS CAA 90 bp | TGTTTCTCTCCCATGTGCGTGGGTTCATTTTCATTAAGGTCAGACTaGCTACAGTTTATCTCTGATACATTACATTCAAAGGATTTCACC | + |
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Preference number: 6 (lower is better) Translates to: CFSPMCVGSFSLRSD*LQFISDTLHSKDFT Trigger: GGTGAAATCCTTTGAATGTAATGTATCAGAGATAAACTGTAGCAAGTCTGACCTTAATGAAAATGAACCCACGCACATGGGAGAGAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS TCA 72 bp | GGACTCATTCCTAGTGAGTTCTCATTCTTGATAGTCTaGTCTGAAATATGGTTTGTGCTCACATTGCAAGTA | + |
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Preference number: 6 (lower is better) Translates to: GLIPSEFSFLIV*SEIWFVLTLQV Trigger: TACTTGCAATGTGAGCACAAACCATATTTCAGATCAGACTATCAAGAATGAGAACTCACTAGGAATGAGTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
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| CDS GCA 72 bp | AACTCATATTCCTTCTGGATAAAGAGCTTCTCATGCTaGCCCTTATGTTTTGGAAGGTATGATTCAATAATA | + |
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Preference number: 6 (lower is better) Translates to: NSYSFWIKSFSC*PLCFGRYDSII Trigger: TATTATTGAATCATACCTTCCAAAACATAAGGGGCAGCATGAGAAGCTCTTTATCCAGAAGGAATATGAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063262.11 ENSMUST00000085852.11 ENSMUST00000110905.9 |
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