Pregenerated sensors for ZFP672 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049755Ensembl transcript IDs: ENSMUST00000057836.12, ENSMUST00000064786.12, ENSMUST00000065533.3, ENSMUST00000108829.8, ENSMUST00000155662.2, ENSMUST00000186859.2
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCACCAGTGGTCTTGTTCCTAGGAGGACCAGGTCCCCGTGCTTCATaGAAACAACTGTCTGAGAAAGTTCAACACTGCCAGGAGAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: APVVLFLGGPGPRAS*KQLSEKVQHCQEKA Trigger: TGCTTTCTCCTGGCAGTGTTGAACTTTCTCAGACAGTTGTTTCCATGAAGCACGGGGACCTGGTCCTCCTAGGAACAAGACCACTGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
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| 3UTR TCA 90 bp | TGCCAGTATGAGTGCCATCTCATACTGCTGCCACTGAAATTAGACTaGCTGCTGACCCAGAGAATAGTCTGGCTCAGACCGTGGTCATGT | + |
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Preference number: 1 (lower is better) Translates to: CQYECHLILLPLKLD*LLTQRIVWLRPWSC Trigger: ACATGACCACGGTCTGAGCCAGACTATTCTCTGGGTCAGCAGTCAGTCTAATTTCAGTGGCAGCAGTATGAGATGGCACTCATACTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
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| 3UTR TCA 90 bp | TGGGCCCTAAGATCATCTTGTCAAAGGACATATGGATGGCCAGGCTaGAGACTGCCTACTTACACGTATTCTGGTTACCTCTGCAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: WALRSSCQRTYGWPG*RLPTYTYSGYLCKG Trigger: TCCCTTGCAGAGGTAACCAGAATACGTGTAAGTAGGCAGTCTTCAGCCTGGCCATCCATATGTCCTTTGACAAGATGATCTTAGGGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR TCA 90 bp | AGAAGAACTGGTGGGGATTTCCATTTAGAGACAAGGCAAGCTAGGTaGACGGCTAGCAACAATGTAACAACAGCAGGTCTGGCTTCCCAA | + |
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Preference number: 1 (lower is better) Translates to: RRTGGDFHLETRQAR*TASNNVTTAGLASQ Trigger: TTGGGAAGCCAGACCTGCTGTTGTTACATTGTTGCTAGCCGTTCACCTAGCTTGCCTTGTCTCTAAATGGAAATCCCCACCAGTTCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR TCA 90 bp | CTGTTGAATGATCTCCTCGGTCTATACCTTTTTATATTGCACTTCTaGAGGTGTGTGTGTATTGGGAGAAGGGGTTGGATCAAGGGCCTC | + |
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Preference number: 1 (lower is better) Translates to: LLNDLLGLYLFILHF*RCVCIGRRGWIKGL Trigger: GAGGCCCTTGATCCAACCCCTTCTCCCAATACACACACACCTTCAGAAGTGCAATATAAAAAGGTATAGACCGAGGAGATCATTCAACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
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| 3UTR TCA 90 bp | GCCTGCTCTTGCCCAGGACTTCAGGTAACTTGTTTTCTTGGGCCTTaGAGTTTCATCTGGAAATATTCTTTTGTTTCACACAGTACTGGG | + |
|
Preference number: 1 (lower is better) Translates to: ACSCPGLQVTCFLGP*SFIWKYSFVSHSTG Trigger: CCCAGTACTGTGTGAAACAAAAGAATATTTCCAGATGAAACTTCAAGGCCCAAGAAAACAAGTTACCTGAAGTCCTGGGCAAGAGCAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR CCA 90 bp | GCCTTGAAGTTTCATCTGGAAATATTCTTTTGTTTCACACAGTACTaGGCTTTATGGACCCAAACAGTCTTCTGCATCCCAAGACAAACA | + |
|
Preference number: 1 (lower is better) Translates to: ALKFHLEIFFCFTQY*ALWTQTVFCIPRQT Trigger: TGTTTGTCTTGGGATGCAGAAGACTGTTTGGGTCCATAAAGCCCAGTACTGTGTGAAACAAAAGAATATTTCCAGATGAAACTTCAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR CCA 90 bp | TCCCTCGAATCACATTCTCATCCACTAACCCTCAAAACTGATCTTTaGTTACAAATTTCCCCCTTGTTCATCTCTAGTTGGAGTCCTATT | + |
|
Preference number: 1 (lower is better) Translates to: SLESHSHPLTLKTDL*LQISPLFISSWSPI Trigger: AATAGGACTCCAACTAGAGATGAACAAGGGGGAAATTTGTAACCAAAGATCAGTTTTGAGGGTTAGTGGATGAGAATGTGATTCGAGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
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| 3UTR CCA 90 bp | TTTCATCTGGAAATATTCTTTTGTTTCACACAGTACTGGGCTTTATaGACCCAAACAGTCTTCTGCATCCCAAGACAAACATTTCCTAAC | + |
|
Preference number: 1 (lower is better) Translates to: FHLEIFFCFTQYWAL*TQTVFCIPRQTFPN Trigger: GTTAGGAAATGTTTGTCTTGGGATGCAGAAGACTGTTTGGGTCCATAAAGCCCAGTACTGTGTGAAACAAAAGAATATTTCCAGATGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR CAA 90 bp | AGCCTGTTCCCCTGGCACTGCCTCCCTGGCATAGCTGTAGCCATTTaGCTTCTCGCCTGCCAGTATGAGTGCCATCTCATACTGCTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: SLFPWHCLPGIAVAI*LLACQYECHLILLP Trigger: TGGCAGCAGTATGAGATGGCACTCATACTGGCAGGCGAGAAGCAAAATGGCTACAGCTATGCCAGGGAGGCAGTGCCAGGGGAACAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
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| 3UTR-3UTR TCA 90 bp | CCATCTTGTTGGGCCCTAAGATCATCTTGTCAAAGGACATATGGATGGCCAGGCTCTTGCATAGGGCTGTaGCATCGGTTCCCTGACTCC | + |
|
Preference number: 2 (lower is better) Translates to: PSCWALRSSCQRTYGWPGSCIGL*HRFPDS Trigger: GGAGTCAGGGAACCGATGTCACAGCCCTATGCAAGA...GCCTGGCCATCCATATGTCCTTTGACAAGATGATCTTAGGGCCCAACAAGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR-3UTR TCA 90 bp | CCATCTTGTTGGGCCCTAAGATCATCTTGTCAAAGGACATATGGATGGCCAGGCGCTTTTCCTTGGGACTaGAAGTCTGTTCACCCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: PSCWALRSSCQRTYGWPGAFPWD*KSVHPA Trigger: AGCTGGGTGAACAGACTTTCAGTCCCAAGGAAAAGC...GCCTGGCCATCCATATGTCCTTTGACAAGATGATCTTAGGGCCCAACAAGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCTTGCCCAGGACTTCAGGTAACTTGTTTTCTTGGGCCTTGAAGTTTCATGCTTTTCCTTGGGACTaGAAGTCTGTTCACCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: LLLPRTSGNLFSWALKFHAFPWD*KSVHPA Trigger: AGCTGGGTGAACAGACTTTCAGTCCCAAGGAAAAGC...ATGAAACTTCAAGGCCCAAGAAAACAAGTTACCTGAAGTCCTGGGCAAGAGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAGCTATAAGCAGTCATTGAACAATTCCAGGCTTTACAGCCTGCTCTTGCCCACAAGGCAAGCTAGGTaGACGGCTAGCAACAATGTA | + |
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Preference number: 2 (lower is better) Translates to: TSYKQSLNNSRLYSLLLPTRQAR*TASNNV Trigger: TACATTGTTGCTAGCCGTTCACCTAGCTTGCCTTGT...GGGCAAGAGCAGGCTGTAAAGCCTGGAATTGTTCAATGACTGCTTATAGCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR-3UTR TCA 90 bp | CAAAGGGGTTCTTGGTGTCACAAACCCAAGCAAGTAACAATATCACCAGCTATATCTTGCATAGGGCTGTaGCATCGGTTCCCTGACTCC | + |
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Preference number: 2 (lower is better) Translates to: QRGSWCHKPKQVTISPAISCIGL*HRFPDS Trigger: GGAGTCAGGGAACCGATGTCACAGCCCTATGCAAGA...TATAGCTGGTGATATTGTTACTTGCTTGGGTTTGTGACACCAAGAACCCCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR-3UTR TCA 90 bp | AGTTTTAATGAAGGACTTTGTGAAGGGAGTTTACCAAGACCACCCCTCTGCCAATACAGCATAGACAGTTaGAGCCTGTTCCCCTGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: SFNEGLCEGSLPRPPLCQYSIDS*SLFPWH Trigger: GTGCCAGGGGAACAGGCTTCAACTGTCTATGCTGTA...TTGGCAGAGGGGTGGTCTTGGTAAACTCCCTTCACAAAGTCCTTCATTAAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
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| 3UTR CAA 90 bp | GGTACCTTTACCTGTCTAACCATCTTGTTGGGCCCTAAGATCATCTaGTCAAAGGACATATGGATGGCCAGGCTGAAGACTGCCTACTTA | + |
|
Preference number: 2 (lower is better) Translates to: GTFTCLTILLGPKII*SKDIWMARLKTAYL Trigger: TAAGTAGGCAGTCTTCAGCCTGGCCATCCATATGTCCTTTGACAAGATGATCTTAGGGCCCAACAAGATGGTTAGACAGGTAAAGGTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR-3UTR GCA 90 bp | CCATCTTGTTGGGCCCTAAGATCATCTTGTCAAAGGACATATGGATGGCCAGGCTCCACTCTCCTATACTaGCTGTATGTTACCTCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: PSCWALRSSCQRTYGWPGSTLLY*LYVTSS Trigger: TGAAGAGGTAACATACAGGCAGTATAGGAGAGTGGA...GCCTGGCCATCCATATGTCCTTTGACAAGATGATCTTAGGGCCCAACAAGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR-3UTR CCA 90 bp | GTCAAAGGACATATGGATGGCCAGGCTGAAGACTGCCTACTTACACGTATTCTGCCTAGTACTCAGAGTTaGGGAATACAAGGATGGATG | + |
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Preference number: 2 (lower is better) Translates to: VKGHMDGQAEDCLLTRILPSTQS*GIQGWM Trigger: CATCCATCCTTGTATTCCCCAACTCTGAGTACTAGG...CAGAATACGTGTAAGTAGGCAGTCTTCAGCCTGGCCATCCATATGTCCTTTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR-3UTR CCA 90 bp | ATTATAGACACAAGCCTTCCAGGATTGTCTTCAGCAAGAACCCAGTTAGGTTGGACCCAGAGAATAGTCTaGCTCAGACCGTGGTCATGT | + |
|
Preference number: 2 (lower is better) Translates to: IIDTSLPGLSSARTQLGWTQRIV*LRPWSC Trigger: ACATGACCACGGTCTGAGCCAGACTATTCTCTGGGT...CCAACCTAACTGGGTTCTTGCTGAAGACAATCCTGGAAGGCTTGTGTCTATAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
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| 3UTR CAA 90 bp | CAAATTAGGTTGTCTGCAGGTACCTTTACCTGTCTAACCATCTTGTaGGGCCCTAAGATCATCTTGTCAAAGGACATATGGATGGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: QIRLSAGTFTCLTIL*GPKIILSKDIWMAR Trigger: CCTGGCCATCCATATGTCCTTTGACAAGATGATCTTAGGGCCCAACAAGATGGTTAGACAGGTAAAGGTACCTGCAGACAACCTAATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR-3UTR TCA 90 bp | GATTCGAAGGATCAAATTAGGTTGTCTGCAGGTACCTTTACCTGTCTAACCATCGCTTTTCCTTGGGACTaGAAGTCTGTTCACCCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: DSKDQIRLSAGTFTCLTIAFPWD*KSVHPA Trigger: AGCTGGGTGAACAGACTTTCAGTCCCAAGGAAAAGC...GATGGTTAGACAGGTAAAGGTACCTGCAGACAACCTAATTTGATCCTTCGAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTTTAATGAAGGACTTTGTGAAGGGAGTTTACCAAGACCACCCCTCTGCCAAAGAACCCAGTTAGGTTaGCTTAGCCAGACCCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: SFNEGLCEGSLPRPPLCQRTQLG*LSQTPL Trigger: TAAAGGGGTCTGGCTAAGCCAACCTAACTGGGTTCT...TTGGCAGAGGGGTGGTCTTGGTAAACTCCCTTCACAAAGTCCTTCATTAAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
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| 3UTR CAA 90 bp | TCACAAACCCAAGCAAGTAACAATATCACCAGCTATAAGCAGTCATaGAACAATTCCAGGCTTTACAGCCTGCTCTTGCCCAGGACTTCA | + |
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Preference number: 2 (lower is better) Translates to: SQTQASNNITSYKQS*NNSRLYSLLLPRTS Trigger: TGAAGTCCTGGGCAAGAGCAGGCTGTAAAGCCTGGAATTGTTCAATGACTGCTTATAGCTGGTGATATTGTTACTTGCTTGGGTTTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTTGCCCAGGACTTCAGGTAACTTGTTTTCTTGGGCCTTGAAGTTTCATCTGTATTCTGGTTACCTCTaGAAGGGAGAAACTTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: LLPRTSGNLFSWALKFHLYSGYL*KGETCH Trigger: GTGACAAGTTTCTCCCTTGCAGAGGTAACCAGAATA...CAGATGAAACTTCAAGGCCCAAGAAAACAAGTTACCTGAAGTCCTGGGCAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR-3UTR GCA 90 bp | ATCATCTTGTCAAAGGACATATGGATGGCCAGGCTGAAGACTGCCTACTTACACTATTCTGGTTACCTCTaGAAGGGAGAAACTTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: IILSKDIWMARLKTAYLHYSGYL*KGETCH Trigger: GTGACAAGTTTCTCCCTTGCAGAGGTAACCAGAATA...GTGTAAGTAGGCAGTCTTCAGCCTGGCCATCCATATGTCCTTTGACAAGATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR-3UTR GCA 90 bp | CTAACCATCTTGTTGGGCCCTAAGATCATCTTGTCAAAGGACATATGGATGGCCTATTCTGGTTACCTCTaGAAGGGAGAAACTTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: LTILLGPKIILSKDIWMAYSGYL*KGETCH Trigger: GTGACAAGTTTCTCCCTTGCAGAGGTAACCAGAATA...GGCCATCCATATGTCCTTTGACAAGATGATCTTAGGGCCCAACAAGATGGTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTTGCCCAGGACTTCAGGTAACTTGTTTTCTTGGGCCTTGAAGTTTCATCTGTGGGGAATACAAGGATaGATGATAGAAGAACTGGTG | + |
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Preference number: 2 (lower is better) Translates to: LLPRTSGNLFSWALKFHLWGIQG*MIEELV Trigger: CACCAGTTCTTCTATCATCCATCCTTGTATTCCCCA...CAGATGAAACTTCAAGGCCCAAGAAAACAAGTTACCTGAAGTCCTGGGCAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR-3UTR CCA 90 bp | ATCATCTTGTCAAAGGACATATGGATGGCCAGGCTGAAGACTGCCTACTTACACACTTGTCACAGATCTTaGTCCTTTAATGAAGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: IILSKDIWMARLKTAYLHTCHRS*SFNEGS Trigger: GCTCCCTTCATTAAAGGACCAAGATCTGTGACAAGT...GTGTAAGTAGGCAGTCTTCAGCCTGGCCATCCATATGTCCTTTGACAAGATGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR CAA 90 bp | AGCCTGCTCTTGCCCAGGACTTCAGGTAACTTGTTTTCTTGGGCCTaGAAGTTTCATCTGGAAATATTCTTTTGTTTCACACAGTACTGG | + |
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Preference number: 2 (lower is better) Translates to: SLLLPRTSGNLFSWA*KFHLEIFFCFTQYW Trigger: CCAGTACTGTGTGAAACAAAAGAATATTTCCAGATGAAACTTCAAGGCCCAAGAAAACAAGTTACCTGAAGTCCTGGGCAAGAGCAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR-3UTR TCA 90 bp | TATGTGGATTCGAAGGATCAAATTAGGTTGTCTGCAGGTACCTTTACCTGTCTAACAAGGCAAGCTAGGTaGACGGCTAGCAACAATGTA | + |
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Preference number: 2 (lower is better) Translates to: YVDSKDQIRLSAGTFTCLTRQAR*TASNNV Trigger: TACATTGTTGCTAGCCGTTCACCTAGCTTGCCTTGT...TAGACAGGTAAAGGTACCTGCAGACAACCTAATTTGATCCTTCGAATCCACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR-3UTR CCA 90 bp | GATTCGAAGGATCAAATTAGGTTGTCTGCAGGTACCTTTACCTGTCTAACCATCCCTAGTACTCAGAGTTaGGGAATACAAGGATGGATG | + |
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Preference number: 2 (lower is better) Translates to: DSKDQIRLSAGTFTCLTIPSTQS*GIQGWM Trigger: CATCCATCCTTGTATTCCCCAACTCTGAGTACTAGG...GATGGTTAGACAGGTAAAGGTACCTGCAGACAACCTAATTTGATCCTTCGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTTTAATGAAGGACTTTGTGAAGGGAGTTTACCAAGACCACCCCTCTGCCAATTGTTCATCTCTAGTTaGAGTCCTATTTCTCCCCCA | + |
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Preference number: 2 (lower is better) Translates to: SFNEGLCEGSLPRPPLCQLFISS*SPISPP Trigger: TGGGGGAGAAATAGGACTCCAACTAGAGATGAACAA...TTGGCAGAGGGGTGGTCTTGGTAAACTCCCTTCACAAAGTCCTTCATTAAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
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| 3UTR-3UTR TCA 90 bp | TCCTCGGTCTATACCTTTTTATATTGCACTTCTGAAGGTGTGTGTGTATTGGGACCACTGAAATTAGACTaGCTGCTGACCCAGAGAATA | + |
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Preference number: 2 (lower is better) Translates to: SSVYTFLYCTSEGVCVLGPLKLD*LLTQRI Trigger: TATTCTCTGGGTCAGCAGTCAGTCTAATTTCAGTGG...TCCCAATACACACACACCTTCAGAAGTGCAATATAAAAAGGTATAGACCGAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
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| 3UTR-3UTR GCA 90 bp | CAAAGGGGTTCTTGGTGTCACAAACCCAAGCAAGTAACAATATCACCAGCTATATCCACTCTCCTATACTaGCTGTATGTTACCTCTTCA | + |
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Preference number: 2 (lower is better) Translates to: QRGSWCHKPKQVTISPAISTLLY*LYVTSS Trigger: TGAAGAGGTAACATACAGGCAGTATAGGAGAGTGGA...TATAGCTGGTGATATTGTTACTTGCTTGGGTTTGTGACACCAAGAACCCCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGTCACAGCAATGAAGAAACCACCACCTAAAAGGAAGAGAACTTGGAACTCACCTAGTACTCAGAGTTaGGGAATACAAGGATGGATG | + |
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Preference number: 2 (lower is better) Translates to: FVTAMKKPPPKRKRTWNSPSTQS*GIQGWM Trigger: CATCCATCCTTGTATTCCCCAACTCTGAGTACTAGG...TGAGTTCCAAGTTCTCTTCCTTTTAGGTGGTGGTTTCTTCATTGCTGTGACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 |
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| 3UTR-3UTR CCA 90 bp | TTTGTCACAGCAATGAAGAAACCACCACCTAAAAGGAAGAGAACTTGGAACTCATTGTCAAAGGACATATaGATGGCCAGGCTGAAGACT | + |
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Preference number: 2 (lower is better) Translates to: FVTAMKKPPPKRKRTWNSLSKDI*MARLKT Trigger: AGTCTTCAGCCTGGCCATCCATATGTCCTTTGACAA...TGAGTTCCAAGTTCTCTTCCTTTTAGGTGGTGGTTTCTTCATTGCTGTGACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 |
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| 3UTR-3UTR TCA 90 bp | TTTGTCACAGCAATGAAGAAACCACCACCTAAAAGGAAGAGAACTTGGAACTCATGTTTTCTTGGGCCTTaGAGTTTCATCTGGAAATAT | + |
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Preference number: 2 (lower is better) Translates to: FVTAMKKPPPKRKRTWNSCFLGP*SFIWKY Trigger: ATATTTCCAGATGAAACTTCAAGGCCCAAGAAAACA...TGAGTTCCAAGTTCTCTTCCTTTTAGGTGGTGGTTTCTTCATTGCTGTGACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 |
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| 3UTR CCA 72 bp | AGACAGTTGAAGCCTGTTCCCCTGGCACTGCCTCCCTaGCATAGCTGTAGCCATTTTGCTTCTCGCCTGCCA | + |
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Preference number: 3 (lower is better) Translates to: RQLKPVPLALPP*HSCSHFASRLP Trigger: TGGCAGGCGAGAAGCAAAATGGCTACAGCTATGCCAGGGAGGCAGTGCCAGGGGAACAGGCTTCAACTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
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| 3UTR-3UTR CAA 90 bp | TGTGCATGTGTGCTGACTCACAGCCGTCAGTCCGCTCCTTCCAACTCTTGGGTTTATTGGGAGAAGGGGTaGGATCAAGGGCCTCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: CACVLTHSRQSAPSNSWVYWEKG*DQGPQA Trigger: TGCCTGAGGCCCTTGATCCAACCCCTTCTCCCAATA...AACCCAAGAGTTGGAAGGAGCGGACTGACGGCTGTGAGTCAGCACACATGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
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| 3UTR TCA 72 bp | GAGTGCCATCTCATACTGCTGCCACTGAAATTAGACTaGCTGCTGACCCAGAGAATAGTCTGGCTCAGACCG | + |
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Preference number: 3 (lower is better) Translates to: ECHLILLPLKLD*LLTQRIVWLRP Trigger: CGGTCTGAGCCAGACTATTCTCTGGGTCAGCAGTCAGTCTAATTTCAGTGGCAGCAGTATGAGATGGCACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
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| 3UTR CCA 72 bp | GTCTTGTTCCTAGGAGGACCAGGTCCCCGTGCTTCATaGAAACAACTGTCTGAGAAAGTTCAACACTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: VLFLGGPGPRAS*KQLSEKVQHCQ Trigger: CTGGCAGTGTTGAACTTTCTCAGACAGTTGTTTCCATGAAGCACGGGGACCTGGTCCTCCTAGGAACAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
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| 3UTR TCA 72 bp | AGGACCAGGTCCCCGTGCTTCATGGAAACAACTGTCTaGGAAAGTTCAACACTGCCAGGAGAAAGCACTAGA | + |
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Preference number: 3 (lower is better) Translates to: RTRSPCFMETTV*ESSTLPGESTR Trigger: TCTAGTGCTTTCTCCTGGCAGTGTTGAACTTTCTCAGACAGTTGTTTCCATGAAGCACGGGGACCTGGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
||
| 3UTR TCA 72 bp | GGTGGGGATTTCCATTTAGAGACAAGGCAAGCTAGGTaGACGGCTAGCAACAATGTAACAACAGCAGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: GGDFHLETRQAR*TASNNVTTAGL Trigger: CAGACCTGCTGTTGTTACATTGTTGCTAGCCGTTCACCTAGCTTGCCTTGTCTCTAAATGGAAATCCCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| 3UTR GCA 72 bp | CTTGTCAAAGGACATATGGATGGCCAGGCTGAAGACTaGCTACTTACACGTATTCTGGTTACCTCTGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LVKGHMDGQAED*LLTRILVTSAR Trigger: CCTTGCAGAGGTAACCAGAATACGTGTAAGTAGGCAGTCTTCAGCCTGGCCATCCATATGTCCTTTGACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| 3UTR GCA 72 bp | GAGAACCCTTCTCAGGAAGCCAAGAGCCAAACATCTTaGTATGCAGTCATTAGGAAAGACAGGGCCTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: ENPSQEAKSQTS*YAVIRKDRAFM Trigger: CATGAAGGCCCTGTCTTTCCTAATGACTGCATAGCAAGATGTTTGGCTCTTGGCTTCCTGAGAAGGGTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
||
| 3UTR CCA 72 bp | CCTTTTTATATTGCACTTCTGAAGGTGTGTGTGTATTaGGAGAAGGGGTTGGATCAAGGGCCTCAGGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: PFYIALLKVCVY*EKGLDQGPQAC Trigger: GCATGCCTGAGGCCCTTGATCCAACCCCTTCTCCCAATACACACACACCTTCAGAAGTGCAATATAAAAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
||
| 3UTR-3UTR CAA 90 bp | TCCCCCTTGTTCATCTCTAGTTGGAGTCCTATTTCTCCCCCACTGTACTGGCTCCTTCCTTATCGTTCTTaGACAAGCCACAGAATACTT | + |
|
Preference number: 3 (lower is better) Translates to: SPLFISSWSPISPPLYWLLPYRS*TSHRIL Trigger: AAGTATTCTGTGGCTTGTCAAAGAACGATAAGGAAG...GAGCCAGTACAGTGGGGGAGAAATAGGACTCCAACTAGAGATGAACAAGGGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
||
| 3UTR-3UTR CAA 90 bp | GATGACAGGTGTGTCCCACTGCCCTTGTTCTTTGTTTTTAGTCAGTGTGTATGTCGCTCCTTCCAACTCTaGGGTTCTAGCGATCTAACT | + |
|
Preference number: 3 (lower is better) Translates to: DDRCVPLPLFFVFSQCVCRSFQL*GSSDLT Trigger: AGTTAGATCGCTAGAACCCAAGAGTTGGAAGGAGCG...ACATACACACTGACTAAAAACAAAGAACAAGGGCAGTGGGACACACCTGTCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
||
| 3UTR CCA 72 bp | TTGTTGGGCCCTAAGATCATCTTGTCAAAGGACATATaGATGGCCAGGCTGAAGACTGCCTACTTACACGTA | + |
|
Preference number: 3 (lower is better) Translates to: LLGPKIILSKDI*MARLKTAYLHV Trigger: TACGTGTAAGTAGGCAGTCTTCAGCCTGGCCATCCATATGTCCTTTGACAAGATGATCTTAGGGCCCAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAACCATCTTGTTGGGCCCTAAGATCATCTTGTCAAAGGACATATGGATGGCCCATCTGAGCTTTTCCTaGGGACTGAAAGTCTGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LTILLGPKIILSKDIWMAHLSFS*GLKVCS Trigger: TGAACAGACTTTCAGTCCCAAGGAAAAGCTCAGATG...GGCCATCCATATGTCCTTTGACAAGATGATCTTAGGGCCCAACAAGATGGTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| 3UTR TCA 72 bp | AGATCATCTTGTCAAAGGACATATGGATGGCCAGGCTaGAGACTGCCTACTTACACGTATTCTGGTTACCTC | + |
|
Preference number: 3 (lower is better) Translates to: RSSCQRTYGWPG*RLPTYTYSGYL Trigger: GAGGTAACCAGAATACGTGTAAGTAGGCAGTCTTCAGCCTGGCCATCCATATGTCCTTTGACAAGATGATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| 3UTR CCA 72 bp | CTTTGGTTACAAATTTCCCCCTTGTTCATCTCTAGTTaGAGTCCTATTTCTCCCCCACTGTACTGGCTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: LWLQISPLFISS*SPISPPLYWLL Trigger: TAGGAGCCAGTACAGTGGGGGAGAAATAGGACTCCAACTAGAGATGAACAAGGGGGAAATTTGTAACCAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTCTTGCCCAGGACTTCAGGTAACTTGTTTTCTTGGGCCTTGAAGTTTCATAAGGATCAAATTAGGTaGTCTGCAGGTACCTTTACC | + |
|
Preference number: 3 (lower is better) Translates to: LLLPRTSGNLFSWALKFHKDQIR*SAGTFT Trigger: GGTAAAGGTACCTGCAGACAACCTAATTTGATCCTT...ATGAAACTTCAAGGCCCAAGAAAACAAGTTACCTGAAGTCCTGGGCAAGAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| 3UTR-3UTR CAA 90 bp | GATGGGATGACAGGTGTGTCCCACTGCCCTTGTTCTTTGTTTTTAGTCAGTGTGGTTTGTTACCATGTTTaGAGGACTGTTCTTCTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: DGMTGVSHCPCSLFLVSVVCYHV*RTVLLA Trigger: TGCAAGAAGAACAGTCCTCAAAACATGGTAACAAAC...CACACTGACTAAAAACAAAGAACAAGGGCAGTGGGACACACCTGTCATCCCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
||
| 3UTR-3UTR CAA 90 bp | ATAGACACAAGCCTTCCAGGATTGTCTTCAGCAAGAACCCAGTTAGGTTGGCTTGGTATGTTCAGAGGTTaGTTACCATGTTTTGAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: IDTSLPGLSSARTQLGWLGMFRG*LPCFED Trigger: GTCCTCAAAACATGGTAACAAACCTCTGAACATACC...AAGCCAACCTAACTGGGTTCTTGCTGAAGACAATCCTGGAAGGCTTGTGTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
||
| 3UTR TCA 72 bp | ATATCCCGGTATGTTCAGAGGTTTGTTACCATGTTTTaGGGACTGTTCTTCTTGCAAACTCCCCAATTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ISRYVQRFVTMF*GLFFLQTPQLQ Trigger: CTGCAATTGGGGAGTTTGCAAGAAGAACAGTCCTCAAAACATGGTAACAAACCTCTGAACATACCGGGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
||
| 3UTR TCA 72 bp | GGCTGTCTGAGTTGGCAGATGGTGCCTTTTAACTGTTaGATGATCTCCTCGGTCTATACCTTTTTATATTGC | + |
|
Preference number: 3 (lower is better) Translates to: GCLSWQMVPFNC*MISSVYTFLYC Trigger: GCAATATAAAAAGGTATAGACCGAGGAGATCATTCAACAGTTAAAAGGCACCATCTGCCAACTCAGACAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTGTCACAGCAATGAAGAAACCACCACCTAAAAGGAAGAGAACTTGGAACTCACATCTGAGCTTTTCCTaGGGACTGAAAGTCTGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: FVTAMKKPPPKRKRTWNSHLSFS*GLKVCS Trigger: TGAACAGACTTTCAGTCCCAAGGAAAAGCTCAGATG...TGAGTTCCAAGTTCTCTTCCTTTTAGGTGGTGGTTTCTTCATTGCTGTGACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 |
||
| 3UTR TCA 72 bp | CCTCGAATCACATTCTCATCCACTAACCCTCAAAACTaGTCTTTGGTTACAAATTTCCCCCTTGTTCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: PRITFSSTNPQN*SLVTNFPLVHL Trigger: GAGATGAACAAGGGGGAAATTTGTAACCAAAGATCAGTTTTGAGGGTTAGTGGATGAGAATGTGATTCGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
||
| 3UTR CCA 72 bp | GAAATATTCTTTTGTTTCACACAGTACTGGGCTTTATaGACCCAAACAGTCTTCTGCATCCCAAGACAAACA | + |
|
Preference number: 3 (lower is better) Translates to: EIFFCFTQYWAL*TQTVFCIPRQT Trigger: TGTTTGTCTTGGGATGCAGAAGACTGTTTGGGTCCATAAAGCCCAGTACTGTGTGAAACAAAAGAATATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| 3UTR CCA 72 bp | TCACATTCTCATCCACTAACCCTCAAAACTGATCTTTaGTTACAAATTTCCCCCTTGTTCATCTCTAGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SHSHPLTLKTDL*LQISPLFISSW Trigger: CCAACTAGAGATGAACAAGGGGGAAATTTGTAACCAAAGATCAGTTTTGAGGGTTAGTGGATGAGAATGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
||
| CDS-3UTR TCA 90 bp | CCATCTTGTTGGGCCCTAAGATCATCTTGTCAAAGGACATATGGATGGCCAGGCCAGTGCCAGGGTCACTaGGGCTGGGGACCACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSCWALRSSCQRTYGWPGQCQGH*GWGPHG Trigger: TCCATGTGGTCCCCAGCCTCAGTGACCCTGGCACTG...GCCTGGCCATCCATATGTCCTTTGACAAGATGATCTTAGGGCCCAACAAGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR TCA 90 bp | CTAACCATCTTGTTGGGCCCTAAGATCATCTTGTCAAAGGACATATGGATGGCCAGCAGCGCAGGGACATaGGGGAAGCGACGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LTILLGPKIILSKDIWMASSAGT*GKRRPQ Trigger: CTGTGGCCGTCGCTTCCCTCATGTCCCTGCGCTGCT...GGCCATCCATATGTCCTTTGACAAGATGATCTTAGGGCCCAACAAGATGGTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR TCA 90 bp | ATCATCTTGTCAAAGGACATATGGATGGCCAGGCTGAAGACTGCCTACTTACACAGCAGCGCAGGGACATaGGGGAAGCGACGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: IILSKDIWMARLKTAYLHSSAGT*GKRRPQ Trigger: CTGTGGCCGTCGCTTCCCTCATGTCCCTGCGCTGCT...GTGTAAGTAGGCAGTCTTCAGCCTGGCCATCCATATGTCCTTTGACAAGATGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR TCA 90 bp | GTCAAAGGACATATGGATGGCCAGGCTGAAGACTGCCTACTTACACGTATTCTGCAGTGCCAGGGTCACTaGGGCTGGGGACCACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: VKGHMDGQAEDCLLTRILQCQGH*GWGPHG Trigger: TCCATGTGGTCCCCAGCCTCAGTGACCCTGGCACTG...CAGAATACGTGTAAGTAGGCAGTCTTCAGCCTGGCCATCCATATGTCCTTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | GTCAAAGGACATATGGATGGCCAGGCTGAAGACTGCCTACTTACACGTATTCTGTGCTGGCGAGCACGATaGAGCAGCAGCGCAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: VKGHMDGQAEDCLLTRILCWRAR*SSSAGT Trigger: TGTCCCTGCGCTGCTGCTGCATCGTGCTCGCCAGCA...CAGAATACGTGTAAGTAGGCAGTCTTCAGCCTGGCCATCCATATGTCCTTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGCTATAAGCAGTCATTGAACAATTCCAGGCTTTACAGCCTGCTCTTGCCCTGCTGGCGAGCACGATaGAGCAGCAGCGCAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TSYKQSLNNSRLYSLLLPCWRAR*SSSAGT Trigger: TGTCCCTGCGCTGCTGCTGCATCGTGCTCGCCAGCA...GGGCAAGAGCAGGCTGTAAAGCCTGGAATTGTTCAATGACTGCTTATAGCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTGCCCAGGACTTCAGGTAACTTGTTTTCTTGGGCCTTGAAGTTTCATCTGCACAGAGGGCAGCGGTaGGGCTTCTCAGGTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLPRTSGNLFSWALKFHLHRGQR*GFSGGC Trigger: GCACCCACCTGAGAAGCCCCACCGCTGCCCTCTGTG...CAGATGAAACTTCAAGGCCCAAGAAAACAAGTTACCTGAAGTCCTGGGCAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTCTTGCCCAGGACTTCAGGTAACTTGTTTTCTTGGGCCTTGAAGTTTCATCAGTGCCAGGGTCACTaGGGCTGGGGACCACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLPRTSGNLFSWALKFHQCQGH*GWGPHG Trigger: TCCATGTGGTCCCCAGCCTCAGTGACCCTGGCACTG...ATGAAACTTCAAGGCCCAAGAAAACAAGTTACCTGAAGTCCTGGGCAAGAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTGCCCAGGACTTCAGGTAACTTGTTTTCTTGGGCCTTGAAGTTTCATCTGTGCTGGCGAGCACGATaGAGCAGCAGCGCAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LLPRTSGNLFSWALKFHLCWRAR*SSSAGT Trigger: TGTCCCTGCGCTGCTGCTGCATCGTGCTCGCCAGCA...CAGATGAAACTTCAAGGCCCAAGAAAACAAGTTACCTGAAGTCCTGGGCAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGCTATAAGCAGTCATTGAACAATTCCAGGCTTTACAGCCTGCTCTTGCCCAGGGTCTGGCCAGCATaGGTCCACCTGTGTGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: TSYKQSLNNSRLYSLLLPRVWPA*VHLCAR Trigger: ACGTGCACACAGGTGGACCCATGCTGGCCAGACCCT...GGGCAAGAGCAGGCTGTAAAGCCTGGAATTGTTCAATGACTGCTTATAGCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | GTCAAAGGACATATGGATGGCCAGGCTGAAGACTGCCTACTTACACGTATTCTGAGGGTCTGGCCAGCATaGGTCCACCTGTGTGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: VKGHMDGQAEDCLLTRILRVWPA*VHLCAR Trigger: ACGTGCACACAGGTGGACCCATGCTGGCCAGACCCT...CAGAATACGTGTAAGTAGGCAGTCTTCAGCCTGGCCATCCATATGTCCTTTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTGCCCAGGACTTCAGGTAACTTGTTTTCTTGGGCCTTGAAGTTTCATCTGGTGGGGCTTCTCAGGTaGGTGCTGGCGAGCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: LLPRTSGNLFSWALKFHLVGLLR*VLASTM Trigger: CATCGTGCTCGCCAGCACCCACCTGAGAAGCCCCAC...CAGATGAAACTTCAAGGCCCAAGAAAACAAGTTACCTGAAGTCCTGGGCAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | ATGGATGATAGAAGAACTGGTGGGGATTTCCATTTAGAGACAAGGCAAGCTAGGCACAGAGGGCAGCGGTaGGGCTTCTCAGGTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: MDDRRTGGDFHLETRQARHRGQR*GFSGGC Trigger: GCACCCACCTGAGAAGCCCCACCGCTGCCCTCTGTG...CCTAGCTTGCCTTGTCTCTAAATGGAAATCCCCACCAGTTCTTCTATCATCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGCTATAAGCAGTCATTGAACAATTCCAGGCTTTACAGCCTGCTCTTGCCCAGGCTGGGGACCACATaGATGCGGGAATGGTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TSYKQSLNNSRLYSLLLPRLGTT*MREWFR Trigger: GCGGAACCATTCCCGCATCCATGTGGTCCCCAGCCT...GGGCAAGAGCAGGCTGTAAAGCCTGGAATTGTTCAATGACTGCTTATAGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTCTTGCCCAGGACTTCAGGTAACTTGTTTTCTTGGGCCTTGAAGTTTCATGCAGGCCACTGTGACTaGAACTCTGGCCACACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLPRTSGNLFSWALKFHAGHCD*NSGHTR Trigger: GCGAGTGTGGCCAGAGTTTCAGTCACAGTGGCCTGC...ATGAAACTTCAAGGCCCAAGAAAACAAGTTACCTGAAGTCCTGGGCAAGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | GTCAAAGGACATATGGATGGCCAGGCTGAAGACTGCCTACTTACACGTATTCTGGTGTGTGTTCGCTGGTaGCGCACAAGTGTGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: VKGHMDGQAEDCLLTRILVCVRW*RTSVAL Trigger: GAGTGCCACACTTGTGCGGCACCAGCGAACACACAC...CAGAATACGTGTAAGTAGGCAGTCTTCAGCCTGGCCATCCATATGTCCTTTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | AATTCCAGGCTTTACAGCCTGCTCTTGCCCAGGACTTCAGGTAACTTGTTTTCTAGGGTCTGGCCAGCATaGGTCCACCTGTGTGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: NSRLYSLLLPRTSGNLFSRVWPA*VHLCAR Trigger: ACGTGCACACAGGTGGACCCATGCTGGCCAGACCCT...AGAAAACAAGTTACCTGAAGTCCTGGGCAAGAGCAGGCTGTAAAGCCTGGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | ATGGATGATAGAAGAACTGGTGGGGATTTCCATTTAGAGACAAGGCAAGCTAGGGTGGGGCTTCTCAGGTaGGTGCTGGCGAGCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: MDDRRTGGDFHLETRQARVGLLR*VLASTM Trigger: CATCGTGCTCGCCAGCACCCACCTGAGAAGCCCCAC...CCTAGCTTGCCTTGTCTCTAAATGGAAATCCCCACCAGTTCTTCTATCATCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGGGGTTCTTGGTGTCACAAACCCAAGCAAGTAACAATATCACCAGCTATACACAGAGGGCAGCGGTaGGGCTTCTCAGGTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QRGSWCHKPKQVTISPAIHRGQR*GFSGGC Trigger: GCACCCACCTGAGAAGCCCCACCGCTGCCCTCTGTG...TATAGCTGGTGATATTGTTACTTGCTTGGGTTTGTGACACCAAGAACCCCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTCTTGCCCAGGACTTCAGGTAACTTGTTTTCTTGGGCCTTGAAGTTTCATAGCCCAGCACTGCTATaGAAGGCCCGTGGGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLPRTSGNLFSWALKFHSPALL*KARGHC Trigger: ACAGTGCCCACGGGCCTTCCATAGCAGTGCTGGGCT...ATGAAACTTCAAGGCCCAAGAAAACAAGTTACCTGAAGTCCTGGGCAAGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTGCCCAGGACTTCAGGTAACTTGTTTTCTTGGGCCTTGAAGTTTCATCTGAGGCTGGGGACCACATaGATGCGGGAATGGTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LLPRTSGNLFSWALKFHLRLGTT*MREWFR Trigger: GCGGAACCATTCCCGCATCCATGTGGTCCCCAGCCT...CAGATGAAACTTCAAGGCCCAAGAAAACAAGTTACCTGAAGTCCTGGGCAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR TCA 90 bp | GGTACCTTTACCTGTCTAACCATCTTGTTGGGCCCTAAGATCATCTTGTCAAAGGCAGGCCACTGTGACTaGAACTCTGGCCACACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GTFTCLTILLGPKIILSKAGHCD*NSGHTR Trigger: GCGAGTGTGGCCAGAGTTTCAGTCACAGTGGCCTGC...CTTTGACAAGATGATCTTAGGGCCCAACAAGATGGTTAGACAGGTAAAGGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR TCA 90 bp | TATGTGGATTCGAAGGATCAAATTAGGTTGTCTGCAGGTACCTTTACCTGTCTAAGCAGCGCAGGGACATaGGGGAAGCGACGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: YVDSKDQIRLSAGTFTCLSSAGT*GKRRPQ Trigger: CTGTGGCCGTCGCTTCCCTCATGTCCCTGCGCTGCT...TAGACAGGTAAAGGTACCTGCAGACAACCTAATTTGATCCTTCGAATCCACATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR TCA 90 bp | ATGGATGATAGAAGAACTGGTGGGGATTTCCATTTAGAGACAAGGCAAGCTAGGGTGTGGAGCTCTCGCTaGAACAGCGTCCACAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: MDDRRTGGDFHLETRQARVWSSR*NSVHSR Trigger: GCGACTGTGGACGCTGTTTCAGCGAGAGCTCCACAC...CCTAGCTTGCCTTGTCTCTAAATGGAAATCCCCACCAGTTCTTCTATCATCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | CTAACCATCTTGTTGGGCCCTAAGATCATCTTGTCAAAGGACATATGGATGGCCGTGTGTGTTCGCTGGTaGCGCACAAGTGTGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LTILLGPKIILSKDIWMAVCVRW*RTSVAL Trigger: GAGTGCCACACTTGTGCGGCACCAGCGAACACACAC...GGCCATCCATATGTCCTTTGACAAGATGATCTTAGGGCCCAACAAGATGGTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | ATCATCTTGTCAAAGGACATATGGATGGCCAGGCTGAAGACTGCCTACTTACACGCTGCCCAAAGCCCTTaGCACAAGTGGCACACACGT | + |
|
Preference number: 4 (lower is better) Translates to: IILSKDIWMARLKTAYLHAAQSP*HKWHTR Trigger: ACGTGTGTGCCACTTGTGGCAAGGGCTTTGGGCAGC...GTGTAAGTAGGCAGTCTTCAGCCTGGCCATCCATATGTCCTTTGACAAGATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | CTAACCATCTTGTTGGGCCCTAAGATCATCTTGTCAAAGGACATATGGATGGCCGGTAGTGGCTGCCATTaGAGCTGCTCGAGCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTILLGPKIILSKDIWMAGSGCH*SCSSPS Trigger: AGAAGGGCTCGAGCAGCTGCAATGGCAGCCACTACC...GGCCATCCATATGTCCTTTGACAAGATGATCTTAGGGCCCAACAAGATGGTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | GGTACCTTTACCTGTCTAACCATCTTGTTGGGCCCTAAGATCATCTTGTCAAAGAGCCCAGCACTGCTATaGAAGGCCCGTGGGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTFTCLTILLGPKIILSKSPALL*KARGHC Trigger: ACAGTGCCCACGGGCCTTCCATAGCAGTGCTGGGCT...CTTTGACAAGATGATCTTAGGGCCCAACAAGATGGTTAGACAGGTAAAGGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| 3UTR CAA 72 bp | AGCAGGTCTGGCTTCCCAAACCATCTGAGCTTTTCCTaGGGACTGAAAGTCTGTTCACCCAGCTATCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRSGFPNHLSFS*GLKVCSPSYLL Trigger: CAGGAGATAGCTGGGTGAACAGACTTTCAGTCCCAAGGAAAAGCTCAGATGGTTTGGGAAGCCAGACCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTCTTGCCCAGGACTTCAGGTAACTTGTTTTCTTGGGCCTTGAAGTTTCATTCTGGCCACACTCGCTaGAGATATAGAGGGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLPRTSGNLFSWALKFHSGHTR*RYRGSG Trigger: GCCAGACCCTCTATATCTGCAGCGAGTGTGGCCAGA...ATGAAACTTCAAGGCCCAAGAAAACAAGTTACCTGAAGTCCTGGGCAAGAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | CTAACCATCTTGTTGGGCCCTAAGATCATCTTGTCAAAGGACATATGGATGGCCTCTGGCCACACTCGCTaGAGATATAGAGGGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTILLGPKIILSKDIWMASGHTR*RYRGSG Trigger: GCCAGACCCTCTATATCTGCAGCGAGTGTGGCCAGA...GGCCATCCATATGTCCTTTGACAAGATGATCTTAGGGCCCAACAAGATGGTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | ATGGATGATAGAAGAACTGGTGGGGATTTCCATTTAGAGACAAGGCAAGCTAGGGCTGCCCAAAGCCCTTaGCACAAGTGGCACACACGT | + |
|
Preference number: 4 (lower is better) Translates to: MDDRRTGGDFHLETRQARAAQSP*HKWHTR Trigger: ACGTGTGTGCCACTTGTGGCAAGGGCTTTGGGCAGC...CCTAGCTTGCCTTGTCTCTAAATGGAAATCCCCACCAGTTCTTCTATCATCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | ATGGATGATAGAAGAACTGGTGGGGATTTCCATTTAGAGACAAGGCAAGCTAGGGGTAGTGGCTGCCATTaGAGCTGCTCGAGCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MDDRRTGGDFHLETRQARGSGCH*SCSSPS Trigger: AGAAGGGCTCGAGCAGCTGCAATGGCAGCCACTACC...CCTAGCTTGCCTTGTCTCTAAATGGAAATCCCCACCAGTTCTTCTATCATCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGGGGTTCTTGGTGTCACAAACCCAAGCAAGTAACAATATCACCAGCTATAAGGCTGGGGACCACATaGATGCGGGAATGGTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QRGSWCHKPKQVTISPAIRLGTT*MREWFR Trigger: GCGGAACCATTCCCGCATCCATGTGGTCCCCAGCCT...TATAGCTGGTGATATTGTTACTTGCTTGGGTTTGTGACACCAAGAACCCCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | ATGGATGATAGAAGAACTGGTGGGGATTTCCATTTAGAGACAAGGCAAGCTAGGTCTGGCCACACTCGCTaGAGATATAGAGGGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MDDRRTGGDFHLETRQARSGHTR*RYRGSG Trigger: GCCAGACCCTCTATATCTGCAGCGAGTGTGGCCAGA...CCTAGCTTGCCTTGTCTCTAAATGGAAATCCCCACCAGTTCTTCTATCATCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | CCATCTTGTTGGGCCCTAAGATCATCTTGTCAAAGGACATATGGATGGCCAGGCTGTCTTTCTGTGCAGTaGAAGCTTGGAGGCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: PSCWALRSSCQRTYGWPGCLSVQ*KLGGNT Trigger: AGTGTTGCCTCCAAGCTTGCACTGCACAGAAAGACA...GCCTGGCCATCCATATGTCCTTTGACAAGATGATCTTAGGGCCCAACAAGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | ATCATCTTGTCAAAGGACATATGGATGGCCAGGCTGAAGACTGCCTACTTACACATTTGCCACACTCTGTaGACTCTGCTGTCCGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IILSKDIWMARLKTAYLHICHTL*TLLSAH Trigger: GTGAGCGGACAGCAGAGTGCACAGAGTGTGGCAAAT...GTGTAAGTAGGCAGTCTTCAGCCTGGCCATCCATATGTCCTTTGACAAGATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | GATTCGAAGGATCAAATTAGGTTGTCTGCAGGTACCTTTACCTGTCTAACCATCGGTAGTGGCTGCCATTaGAGCTGCTCGAGCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSKDQIRLSAGTFTCLTIGSGCH*SCSSPS Trigger: AGAAGGGCTCGAGCAGCTGCAATGGCAGCCACTACC...GATGGTTAGACAGGTAAAGGTACCTGCAGACAACCTAATTTGATCCTTCGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | AATTCCAGGCTTTACAGCCTGCTCTTGCCCAGGACTTCAGGTAACTTGTTTTCTCATATGCCACATAGATaGGCCTCAGTGCCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NSRLYSLLLPRTSGNLFSHMPHR*ASVPGS Trigger: TGACCCTGGCACTGAGGCCCATCTATGTGGCATATG...AGAAAACAAGTTACCTGAAGTCCTGGGCAAGAGCAGGCTGTAAAGCCTGGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTGCCCAGGACTTCAGGTAACTTGTTTTCTTGGGCCTTGAAGTTTCATCTGCATATGCCACATAGATaGGCCTCAGTGCCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLPRTSGNLFSWALKFHLHMPHR*ASVPGS Trigger: TGACCCTGGCACTGAGGCCCATCTATGTGGCATATG...CAGATGAAACTTCAAGGCCCAAGAAAACAAGTTACCTGAAGTCCTGGGCAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | CTAACCATCTTGTTGGGCCCTAAGATCATCTTGTCAAAGGACATATGGATGGCCGGACTTGCCGCACTCTaGGCACTTGTGTGGTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: LTILLGPKIILSKDIWMAGLAAL*ALVWFM Trigger: CATAAACCACACAAGTGCCCAGAGTGCGGCAAGTCC...GGCCATCCATATGTCCTTTGACAAGATGATCTTAGGGCCCAACAAGATGGTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| 3UTR CAA 72 bp | CAGTCATTGAACAATTCCAGGCTTTACAGCCTGCTCTaGCCCAGGACTTCAGGTAACTTGTTTTCTTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QSLNNSRLYSLL*PRTSGNLFSWA Trigger: GGCCCAAGAAAACAAGTTACCTGAAGTCCTGGGCAAGAGCAGGCTGTAAAGCCTGGAATTGTTCAATGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | AATTCCAGGCTTTACAGCCTGCTCTTGCCCAGGACTTCAGGTAACTTGTTTTCTAGGTGTGTCTTTCTGTaGAGTGCAAGCTTGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NSRLYSLLLPRTSGNLFSRCVFL*SASLEA Trigger: TGCCTCCAAGCTTGCACTGCACAGAAAGACACACCT...AGAAAACAAGTTACCTGAAGTCCTGGGCAAGAGCAGGCTGTAAAGCCTGGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | TACTCAGAGTTGGGGAATACAAGGATGGATGATAGAAGAACTGGTGGGGATTTCATTTGCCACACTCTGTaGACTCTGCTGTCCGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: YSELGNTRMDDRRTGGDFICHTL*TLLSAH Trigger: GTGAGCGGACAGCAGAGTGCACAGAGTGTGGCAAAT...GAAATCCCCACCAGTTCTTCTATCATCCATCCTTGTATTCCCCAACTCTGAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | TACTCAGAGTTGGGGAATACAAGGATGGATGATAGAAGAACTGGTGGGGATTTCGGACTTGCCGCACTCTaGGCACTTGTGTGGTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: YSELGNTRMDDRRTGGDFGLAAL*ALVWFM Trigger: CATAAACCACACAAGTGCCCAGAGTGCGGCAAGTCC...GAAATCCCCACCAGTTCTTCTATCATCCATCCTTGTATTCCCCAACTCTGAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | ATGGATGATAGAAGAACTGGTGGGGATTTCCATTTAGAGACAAGGCAAGCTAGGGGACTTGCCGCACTCTaGGCACTTGTGTGGTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: MDDRRTGGDFHLETRQARGLAAL*ALVWFM Trigger: CATAAACCACACAAGTGCCCAGAGTGCGGCAAGTCC...CCTAGCTTGCCTTGTCTCTAAATGGAAATCCCCACCAGTTCTTCTATCATCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTTAATGAAGGACTTTGTGAAGGGAGTTTACCAAGACCACCCCTCTGCCAATATTCCTGTGGTTTGTaGGGCGACTCCTGGACCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SFNEGLCEGSLPRPPLCQYSCGL*GDSWTL Trigger: TAGGGTCCAGGAGTCGCCCCACAAACCACAGGAATA...TTGGCAGAGGGGTGGTCTTGGTAAACTCCCTTCACAAAGTCCTTCATTAAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
||
| CDS-3UTR TCA 90 bp | AATTCCAGGCTTTACAGCCTGCTCTTGCCCAGGACTTCAGGTAACTTGTTTTCTAGCACTGCACTATACTaGAAGCTCTTGCCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: NSRLYSLLLPRTSGNLFSSTALY*KLLPHT Trigger: TGTGTGTGGCAAGAGCTTTCAGTATAGTGCAGTGCT...AGAAAACAAGTTACCTGAAGTCCTGGGCAAGAGCAGGCTGTAAAGCCTGGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR TCA 90 bp | CTAACCATCTTGTTGGGCCCTAAGATCATCTTGTCAAAGGACATATGGATGGCCGTGTGGAACTCTTGCTaGAGCTCTTACCACATATGC | + |
|
Preference number: 4 (lower is better) Translates to: LTILLGPKIILSKDIWMAVWNSC*SSYHIC Trigger: GCATATGTGGTAAGAGCTTCAGCAAGAGTTCCACAC...GGCCATCCATATGTCCTTTGACAAGATGATCTTAGGGCCCAACAAGATGGTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR TCA 90 bp | AATTCCAGGCTTTACAGCCTGCTCTTGCCCAGGACTTCAGGTAACTTGTTTTCTGTGTGGAACTCTTGCTaGAGCTCTTACCACATATGC | + |
|
Preference number: 4 (lower is better) Translates to: NSRLYSLLLPRTSGNLFSVWNSC*SSYHIC Trigger: GCATATGTGGTAAGAGCTTCAGCAAGAGTTCCACAC...AGAAAACAAGTTACCTGAAGTCCTGGGCAAGAGCAGGCTGTAAAGCCTGGAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | ATCATCTTGTCAAAGGACATATGGATGGCCAGGCTGAAGACTGCCTACTTACACAGCTCTTACCACATATaGCACATAGATGGGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IILSKDIWMARLKTAYLHSSYHI*HIDGPQ Trigger: CTGAGGCCCATCTATGTGGCATATGTGGTAAGAGCT...GTGTAAGTAGGCAGTCTTCAGCCTGGCCATCCATATGTCCTTTGACAAGATGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGGGGTTCTTGGTGTCACAAACCCAAGCAAGTAACAATATCACCAGCTATAATTTGCCACACTCTGTaGACTCTGCTGTCCGCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QRGSWCHKPKQVTISPAIICHTL*TLLSAH Trigger: GTGAGCGGACAGCAGAGTGCACAGAGTGTGGCAAAT...TATAGCTGGTGATATTGTTACTTGCTTGGGTTTGTGACACCAAGAACCCCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | CTAACCATCTTGTTGGGCCCTAAGATCATCTTGTCAAAGGACATATGGATGGCCCACTTGTGTGGTTTATaGCCTGCATGGTTGCGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LTILLGPKIILSKDIWMAHLCGL*PAWLRK Trigger: TTTGCGCAACCATGCAGGCCATAAACCACACAAGTG...GGCCATCCATATGTCCTTTGACAAGATGATCTTAGGGCCCAACAAGATGGTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| 3UTR CAA 72 bp | ACCTGTCTAACCATCTTGTTGGGCCCTAAGATCATCTaGTCAAAGGACATATGGATGGCCAGGCTGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: TCLTILLGPKII*SKDIWMARLKT Trigger: AGTCTTCAGCCTGGCCATCCATATGTCCTTTGACAAGATGATCTTAGGGCCCAACAAGATGGTTAGACAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR TCA 90 bp | TACTCAGAGTTGGGGAATACAAGGATGGATGATAGAAGAACTGGTGGGGATTTCAGCACTGCACTATACTaGAAGCTCTTGCCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: YSELGNTRMDDRRTGGDFSTALY*KLLPHT Trigger: TGTGTGTGGCAAGAGCTTTCAGTATAGTGCAGTGCT...GAAATCCCCACCAGTTCTTCTATCATCCATCCTTGTATTCCCCAACTCTGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | AATTCCAGGCTTTACAGCCTGCTCTTGCCCAGGACTTCAGGTAACTTGTTTTCTTCTTGCCACACACACTaGAGGAATAAGGTCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NSRLYSLLLPRTSGNLFSSCHTH*RNKVFP Trigger: AGGAAAGACCTTATTCCTGCAGTGTGTGTGGCAAGA...AGAAAACAAGTTACCTGAAGTCCTGGGCAAGAGCAGGCTGTAAAGCCTGGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTCTTGCCCAGGACTTCAGGTAACTTGTTTTCTTGGGCCTTGAAGTTTCATTCTTGCCACACACACTaGAGGAATAAGGTCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLPRTSGNLFSWALKFHSCHTH*RNKVFP Trigger: AGGAAAGACCTTATTCCTGCAGTGTGTGTGGCAAGA...ATGAAACTTCAAGGCCCAAGAAAACAAGTTACCTGAAGTCCTGGGCAAGAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | ATGGATGATAGAAGAACTGGTGGGGATTTCCATTTAGAGACAAGGCAAGCTAGGAGCTCTTACCACATATaGCACATAGATGGGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MDDRRTGGDFHLETRQARSSYHI*HIDGPQ Trigger: CTGAGGCCCATCTATGTGGCATATGTGGTAAGAGCT...CCTAGCTTGCCTTGTCTCTAAATGGAAATCCCCACCAGTTCTTCTATCATCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | TTTCATCTGGAAATATTCTTTTGTTTCACACAGTACTGGGCTTTATGGACCCAAGCTGCCCAAAGCCCTTaGCACAAGTGGCACACACGT | + |
|
Preference number: 4 (lower is better) Translates to: FHLEIFFCFTQYWALWTQAAQSP*HKWHTR Trigger: ACGTGTGTGCCACTTGTGGCAAGGGCTTTGGGCAGC...TTGGGTCCATAAAGCCCAGTACTGTGTGAAACAAAAGAATATTTCCAGATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGGGGTTCTTGGTGTCACAAACCCAAGCAAGTAACAATATCACCAGCTATAAGGTGTGTCTTTCTGTaGAGTGCAAGCTTGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QRGSWCHKPKQVTISPAIRCVFL*SASLEA Trigger: TGCCTCCAAGCTTGCACTGCACAGAAAGACACACCT...TATAGCTGGTGATATTGTTACTTGCTTGGGTTTGTGACACCAAGAACCCCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR TCA 90 bp | GATTCGAAGGATCAAATTAGGTTGTCTGCAGGTACCTTTACCTGTCTAACCATCGTGTGGAACTCTTGCTaGAGCTCTTACCACATATGC | + |
|
Preference number: 4 (lower is better) Translates to: DSKDQIRLSAGTFTCLTIVWNSC*SSYHIC Trigger: GCATATGTGGTAAGAGCTTCAGCAAGAGTTCCACAC...GATGGTTAGACAGGTAAAGGTACCTGCAGACAACCTAATTTGATCCTTCGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | TATGTGGATTCGAAGGATCAAATTAGGTTGTCTGCAGGTACCTTTACCTGTCTAAGGTGTGTCTTTCTGTaGAGTGCAAGCTTGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: YVDSKDQIRLSAGTFTCLRCVFL*SASLEA Trigger: TGCCTCCAAGCTTGCACTGCACAGAAAGACACACCT...TAGACAGGTAAAGGTACCTGCAGACAACCTAATTTGATCCTTCGAATCCACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGGGGTTCTTGGTGTCACAAACCCAAGCAAGTAACAATATCACCAGCTATACACTTGTGTGGTTTATaGCCTGCATGGTTGCGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QRGSWCHKPKQVTISPAIHLCGL*PAWLRK Trigger: TTTGCGCAACCATGCAGGCCATAAACCACACAAGTG...TATAGCTGGTGATATTGTTACTTGCTTGGGTTTGTGACACCAAGAACCCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | ATTATAGACACAAGCCTTCCAGGATTGTCTTCAGCAAGAACCCAGTTAGGTTGGAACAGGGACCAGCTCTaGAATTCCTTTCACTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IIDTSLPGLSSARTQLGWNRDQL*NSFHFR Trigger: TCTGAAGTGAAAGGAATTCCAGAGCTGGTCCCTGTT...CCAACCTAACTGGGTTCTTGCTGAAGACAATCCTGGAAGGCTTGTGTCTATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
||
| 3UTR CAA 72 bp | AGGTTGTCTGCAGGTACCTTTACCTGTCTAACCATCTaGTTGGGCCCTAAGATCATCTTGTCAAAGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: RLSAGTFTCLTI*LGPKIILSKDI Trigger: TATGTCCTTTGACAAGATGATCTTAGGGCCCAACAAGATGGTTAGACAGGTAAAGGTACCTGCAGACAACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| 3UTR CAA 72 bp | CTTTACAGCCTGCTCTTGCCCAGGACTTCAGGTAACTaGTTTTCTTGGGCCTTGAAGTTTCATCTGGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: LYSLLLPRTSGN*FSWALKFHLEI Trigger: TATTTCCAGATGAAACTTCAAGGCCCAAGAAAACAAGTTACCTGAAGTCCTGGGCAAGAGCAGGCTGTAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | GGTACCTTTACCTGTCTAACCATCTTGTTGGGCCCTAAGATCATCTTGTCAAAGTATACTGAAAGCTCTTaGCACACACACTGCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GTFTCLTILLGPKIILSKYTESS*HTHCRN Trigger: ATTCCTGCAGTGTGTGTGGCAAGAGCTTTCAGTATA...CTTTGACAAGATGATCTTAGGGCCCAACAAGATGGTTAGACAGGTAAAGGTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | ATGGATGATAGAAGAACTGGTGGGGATTTCCATTTAGAGACAAGGCAAGCTAGGTATACTGAAAGCTCTTaGCACACACACTGCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: MDDRRTGGDFHLETRQARYTESS*HTHCRN Trigger: ATTCCTGCAGTGTGTGTGGCAAGAGCTTTCAGTATA...CCTAGCTTGCCTTGTCTCTAAATGGAAATCCCCACCAGTTCTTCTATCATCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | TATGTGGATTCGAAGGATCAAATTAGGTTGTCTGCAGGTACCTTTACCTGTCTAAGCTCTTACCACATATaGCACATAGATGGGCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YVDSKDQIRLSAGTFTCLSSYHI*HIDGPQ Trigger: CTGAGGCCCATCTATGTGGCATATGTGGTAAGAGCT...TAGACAGGTAAAGGTACCTGCAGACAACCTAATTTGATCCTTCGAATCCACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CCA 90 bp | TGTTCAGAGGTTTGTTACCATGTTTTGAGGACTGTTCTTCTTGCAAACTCCCCACACACACACACAACTTaGAAAAAGGCCAATAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: CSEVCYHVLRTVLLANSPHTHTT*KKANNP Trigger: AGGGTTATTGGCCTTTTTCCAAGTTGTGTGTGTGTG...TGGGGAGTTTGCAAGAAGAACAGTCCTCAAAACATGGTAACAAACCTCTGAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
||
| 3UTR CAA 72 bp | GAAGAGAACTTGGAACTCATTTTGACAAAGGGGTTCTaGGTGTCACAAACCCAAGCAAGTAACAATATCACC | + |
|
Preference number: 4 (lower is better) Translates to: EENLELILTKGF*VSQTQASNNIT Trigger: GGTGATATTGTTACTTGCTTGGGTTTGTGACACCAAGAACCCCTTTGTCAAAATGAGTTCCAAGTTCTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 |
||
| 3UTR CAA 72 bp | TATATCCCGGTATGTTCAGAGGTTTGTTACCATGTTTaGAGGACTGTTCTTCTTGCAAACTCCCCAATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: YIPVCSEVCYHV*RTVLLANSPIA Trigger: TGCAATTGGGGAGTTTGCAAGAAGAACAGTCCTCAAAACATGGTAACAAACCTCTGAACATACCGGGATATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
||
| 3UTR CAA 72 bp | GAGAACCACTGTTTACACGGCCTTCCTTATCGTTCTTaGACAAGCCACAGAATACTTTTTAGTGTAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ENHCLHGLPYRS*TSHRILFSVTA Trigger: AGCAGTTACACTAAAAAGTATTCTGTGGCTTGTCAAAGAACGATAAGGAAGGCCGTGTAAACAGTGGTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
||
| CDS-3UTR TCA 90 bp | TTTCATCTGGAAATATTCTTTTGTTTCACACAGTACTGGGCTTTATGGACCCAAAGCACTGCACTATACTaGAAGCTCTTGCCACACACA | + |
|
Preference number: 4 (lower is better) Translates to: FHLEIFFCFTQYWALWTQSTALY*KLLPHT Trigger: TGTGTGTGGCAAGAGCTTTCAGTATAGTGCAGTGCT...TTGGGTCCATAAAGCCCAGTACTGTGTGAAACAAAAGAATATTTCCAGATGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | TTTCATCTGGAAATATTCTTTTGTTTCACACAGTACTGGGCTTTATGGACCCAATGTCTTTCTGTGCAGTaGAAGCTTGGAGGCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: FHLEIFFCFTQYWALWTQCLSVQ*KLGGNT Trigger: AGTGTTGCCTCCAAGCTTGCACTGCACAGAAAGACA...TTGGGTCCATAAAGCCCAGTACTGTGTGAAACAAAAGAATATTTCCAGATGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR GCA 90 bp | TTTCATCTGGAAATATTCTTTTGTTTCACACAGTACTGGGCTTTATGGACCCAATCTTGCCACACACACTaGAGGAATAAGGTCTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FHLEIFFCFTQYWALWTQSCHTH*RNKVFP Trigger: AGGAAAGACCTTATTCCTGCAGTGTGTGTGGCAAGA...TTGGGTCCATAAAGCCCAGTACTGTGTGAAACAAAAGAATATTTCCAGATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| 3UTR CAA 72 bp | GTCATGTTGACCATATATCCCGGTATGTTCAGAGGTTaGTTACCATGTTTTGAGGACTGTTCTTCTTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VMLTIYPGMFRG*LPCFEDCSSCK Trigger: TTTGCAAGAAGAACAGTCCTCAAAACATGGTAACAAACCTCTGAACATACCGGGATATATGGTCAACATGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
||
| 3UTR CAA 72 bp | TTGCCCAGGACTTCAGGTAACTTGTTTTCTTGGGCCTaGAAGTTTCATCTGGAAATATTCTTTTGTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LPRTSGNLFSWA*KFHLEIFFCFT Trigger: TGTGAAACAAAAGAATATTTCCAGATGAAACTTCAAGGCCCAAGAAAACAAGTTACCTGAAGTCCTGGGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS TCA 90 bp | TCAGGTGGGTGCTGGCGAGCACGATGCAGCAGCAGCGCAGGGACATaGGGGAAGCGACGGCCACAGAGGCGGCAAGGACGGGTGCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGGCWRARCSSSAGT*GKRRPQRRQGRVRL Trigger: CAGCCGCACCCGTCCTTGCCGCCTCTGTGGCCGTCGCTTCCCTCATGTCCCTGCGCTGCTGCTGCATCGTGCTCGCCAGCACCCACCTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS CCA 90 bp | CCGAAAAGAGCGGGCACACAGAGGGCAGCGGTGGGGCTTCTCAGGTaGGTGCTGGCGAGCACGATGCAGCAGCAGCGCAGGGACATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PKRAGTQRAAVGLLR*VLASTMQQQRRDMR Trigger: CCTCATGTCCCTGCGCTGCTGCTGCATCGTGCTCGCCAGCACCCACCTGAGAAGCCCCACCGCTGCCCTCTGTGTGCCCGCTCTTTTCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS GCA 90 bp | GGCTACGCTGGTGCACTACTAGATCATACCGCTGCCCAAAGCCCTTaGCACAAGTGGCACACACGTGCGGCCTTTCACCCTGATGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GYAGALLDHTAAQSP*HKWHTRAAFHPDGC Trigger: GCAGCCATCAGGGTGAAAGGCCGCACGTGTGTGCCACTTGTGGCAAGGGCTTTGGGCAGCGGTATGATCTAGTAGTGCACCAGCGTAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| CDS CCA 90 bp | GGTGCACTACTAGATCATACCGCTGCCCAAAGCCCTTGCCACAAGTaGCACACACGTGCGGCCTTTCACCCTGATGGCTGCGCTGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GALLDHTAAQSPCHK*HTRAAFHPDGCAGD Trigger: GTCACCAGCGCAGCCATCAGGGTGAAAGGCCGCACGTGTGTGCCACTTGTGGCAAGGGCTTTGGGCAGCGGTATGATCTAGTAGTGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS TCA 90 bp | GCCTTCGGTGCGTTCCCAGGTGTAGATCCAGCAGGCCACTGTGACTaGAACTCTGGCCACACTCGCTGCAGATATAGAGGGTCTGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AFGAFPGVDPAGHCD*NSGHTRCRYRGSGQ Trigger: CTGGCCAGACCCTCTATATCTGCAGCGAGTGTGGCCAGAGTTTCAGTCACAGTGGCCTGCTGGATCTACACCTGGGAACGCACCGAAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS GCA 90 bp | GTGGCTGCCATTGCAGCTGCTCGAGCCCTTCTGTGGGACCGCTGGTaGTGTGATAGCGACCGGCCATGGCTAAAGAATTTGCCACACTCT | + |
|
Preference number: 5 (lower is better) Translates to: VAAIAAARALLWDRW*CDSDRPWLKNLPHS Trigger: AGAGTGTGGCAAATTCTTTAGCCATGGCCGGTCGCTATCACAGCACCAGCGGTCCCACAGAAGGGCTCGAGCAGCTGCAATGGCAGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS CCA 90 bp | GTAGTGGCTGCCATTGCAGCTGCTCGAGCCCTTCTGTGGGACCGCTaGTGCTGTGATAGCGACCGGCCATGGCTAAAGAATTTGCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: VVAAIAAARALLWDR*CCDSDRPWLKNLPH Trigger: GTGTGGCAAATTCTTTAGCCATGGCCGGTCGCTATCACAGCACCAGCGGTCCCACAGAAGGGCTCGAGCAGCTGCAATGGCAGCCACTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CAA 90 bp | CCATCTTGTTGGGCCCTAAGATCATCTTGTCAAAGGACATATGGATGGCCAGGCCGCTGCCCAAAGCCCTaGCCACAAGTGGCACACACG | + |
|
Preference number: 5 (lower is better) Translates to: PSCWALRSSCQRTYGWPGRCPKP*PQVAHT Trigger: CGTGTGTGCCACTTGTGGCAAGGGCTTTGGGCAGCG...GCCTGGCCATCCATATGTCCTTTGACAAGATGATCTTAGGGCCCAACAAGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS GCA 90 bp | CACTCTGTGCACTCTGCTGTCCGCTCACCTAGGTGTGTCTTTCTGTaGAGTGCAAGCTTGGAGGCAACACTAAAGGACTTGCCGCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: HSVHSAVRSPRCVFL*SASLEATLKDLPHS Trigger: AGAGTGCGGCAAGTCCTTTAGTGTTGCCTCCAAGCTTGCACTGCACAGAAAGACACACCTAGGTGAGCGGACAGCAGAGTGCACAGAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CAA 90 bp | CTAACCATCTTGTTGGGCCCTAAGATCATCTTGTCAAAGGACATATGGATGGCCCGCTGCCCAAAGCCCTaGCCACAAGTGGCACACACG | + |
|
Preference number: 5 (lower is better) Translates to: LTILLGPKIILSKDIWMARCPKP*PQVAHT Trigger: CGTGTGTGCCACTTGTGGCAAGGGCTTTGGGCAGCG...GGCCATCCATATGTCCTTTGACAAGATGATCTTAGGGCCCAACAAGATGGTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS-3UTR CAA 90 bp | ATGGATGATAGAAGAACTGGTGGGGATTTCCATTTAGAGACAAGGCAAGCTAGGCGCTGCCCAAAGCCCTaGCCACAAGTGGCACACACG | + |
|
Preference number: 5 (lower is better) Translates to: MDDRRTGGDFHLETRQARRCPKP*PQVAHT Trigger: CGTGTGTGCCACTTGTGGCAAGGGCTTTGGGCAGCG...CCTAGCTTGCCTTGTCTCTAAATGGAAATCCCCACCAGTTCTTCTATCATCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| CDS TCA 90 bp | ATGTCTACCGACCGTGGGGTGTGCATTCAATACACTATCCCTGTCTaGCTGAGATTGATATTCCTGTGGTTTGTGGGGCGACTCCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: MSTDRGVCIQYTIPV*LRLIFLWFVGRLLD Trigger: GTCCAGGAGTCGCCCCACAAACCACAGGAATATCAATCTCAGTCAGACAGGGATAGTGTATTGAATGCACACCCCACGGTCGGTAGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
||
| CDS-3UTR CAA 90 bp | ATAGACACAAGCCTTCCAGGATTGTCTTCAGCAAGAACCCAGTTAGGTTGGCTTAAGCCCTCCCCGCAATaGCTTGTGAGTTCATTATGG | + |
|
Preference number: 5 (lower is better) Translates to: IDTSLPGLSSARTQLGWLKPSPQ*LVSSLW Trigger: CCATAATGAACTCACAAGCAATTGCGGGGAGGGCTT...AAGCCAACCTAACTGGGTTCTTGCTGAAGACAATCCTGGAAGGCTTGTGTCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
||
| CDS-3UTR CAA 90 bp | CCATCTTGTTGGGCCCTAAGATCATCTTGTCAAAGGACATATGGATGGCCAGGCAAATGTACATTGAGGTaGGAAATGCAGGTGAATCGC | + |
|
Preference number: 5 (lower is better) Translates to: PSCWALRSSCQRTYGWPGKCTLR*EMQVNR Trigger: GCGATTCACCTGCATTTCCAACCTCAATGTACATTT...GCCTGGCCATCCATATGTCCTTTGACAAGATGATCTTAGGGCCCAACAAGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| CDS-3UTR CAA 90 bp | ACCAGCTATAAGCAGTCATTGAACAATTCCAGGCTTTACAGCCTGCTCTTGCCCAAATGTACATTGAGGTaGGAAATGCAGGTGAATCGC | + |
|
Preference number: 5 (lower is better) Translates to: TSYKQSLNNSRLYSLLLPKCTLR*EMQVNR Trigger: GCGATTCACCTGCATTTCCAACCTCAATGTACATTT...GGGCAAGAGCAGGCTGTAAAGCCTGGAATTGTTCAATGACTGCTTATAGCTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| CDS CCA 72 bp | GCGGGCACACAGAGGGCAGCGGTGGGGCTTCTCAGGTaGGTGCTGGCGAGCACGATGCAGCAGCAGCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: AGTQRAAVGLLR*VLASTMQQQRR Trigger: CCTGCGCTGCTGCTGCATCGTGCTCGCCAGCACCCACCTGAGAAGCCCCACCGCTGCCCTCTGTGTGCCCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| CDS TCA 72 bp | TGCTGGCGAGCACGATGCAGCAGCAGCGCAGGGACATaGGGGAAGCGACGGCCACAGAGGCGGCAAGGACGG | + |
|
Preference number: 6 (lower is better) Translates to: CWRARCSSSAGT*GKRRPQRRQGR Trigger: CCGTCCTTGCCGCCTCTGTGGCCGTCGCTTCCCTCATGTCCCTGCGCTGCTGCTGCATCGTGCTCGCCAGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| CDS GCA 72 bp | GCACACAGAGGGCAGCGGTGGGGCTTCTCAGGTGGGTaGTGGCGAGCACGATGCAGCAGCAGCGCAGGGACA | + |
|
Preference number: 6 (lower is better) Translates to: AHRGQRWGFSGG*WRARCSSSAGT Trigger: TGTCCCTGCGCTGCTGCTGCATCGTGCTCGCCAGCACCCACCTGAGAAGCCCCACCGCTGCCCTCTGTGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| CDS CCA 72 bp | GGGTCACTGAGGCTGGGGACCACATGGATGCGGGAATaGTTCCGCAGCCCAGCACTGCTATGGAAGGCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: GSLRLGTTWMRE*FRSPALLWKAR Trigger: ACGGGCCTTCCATAGCAGTGCTGGGCTGCGGAACCATTCCCGCATCCATGTGGTCCCCAGCCTCAGTGACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| CDS CCA 72 bp | GCCTCAGTGCCAGGGTCACTGAGGCTGGGGACCACATaGATGCGGGAATGGTTCCGCAGCCCAGCACTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: ASVPGSLRLGTT*MREWFRSPALL Trigger: TAGCAGTGCTGGGCTGCGGAACCATTCCCGCATCCATGTGGTCCCCAGCCTCAGTGACCCTGGCACTGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| CDS CAA 90 bp | GCTGCTCGAGCACAGCGTTCACCACACTCTAGACAGCAGAAACGCTaGTCGCCACCATGGGCCCGTTCGTGCCGCAGCAGCACTGCACTA | + |
|
Preference number: 6 (lower is better) Translates to: AARAQRSPHSRQQKR*SPPWARSCRSSTAL Trigger: TAGTGCAGTGCTGCTGCGGCACGAACGGGCCCATGGTGGCGACAAGCGTTTCTGCTGTCTAGAGTGTGGTGAACGCTGTGCTCGAGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 ENSMUST00000155662.2 ENSMUST00000186859.2 |
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| CDS GCA 72 bp | CTCAGTGACTACAGTGGTGGTGGTAGTGGCTGCCATTaGAGCTGCTCGAGCCCTTCTGTGGGACCGCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LSDYSGGGSGCH*SCSSPSVGPLV Trigger: CACCAGCGGTCCCACAGAAGGGCTCGAGCAGCTGCAATGGCAGCCACTACCACCACCACTGTAGTCACTGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| CDS TCA 72 bp | GGCTGCGCTGGTGACGCAGCAGTGTGGAGCTCTCGCTaGAACAGCGTCCACAGTCGCTACATGCATATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GCAGDAAVWSSR*NSVHSRYMHMA Trigger: AGCCATATGCATGTAGCGACTGTGGACGCTGTTTCAGCGAGAGCTCCACACTGCTGCGTCACCAGCGCAGCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS GCA 72 bp | GTCGCCACCATGGGCCCGTTCGTGCCGCAGCAGCACTaGACTATACTGAAAGCTCTTGCCACACACACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VATMGPFVPQQH*TILKALATHTA Trigger: TGCAGTGTGTGTGGCAAGAGCTTTCAGTATAGTGCAGTGCTGCTGCGGCACGAACGGGCCCATGGTGGCGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 ENSMUST00000155662.2 ENSMUST00000186859.2 |
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| CDS CCA 72 bp | CCACACTCTAGACAGCAGAAACGCTTGTCGCCACCATaGGCCCGTTCGTGCCGCAGCAGCACTGCACTATAC | + |
|
Preference number: 6 (lower is better) Translates to: PHSRQQKRLSPP*ARSCRSSTALY Trigger: GTATAGTGCAGTGCTGCTGCGGCACGAACGGGCCCATGGTGGCGACAAGCGTTTCTGCTGTCTAGAGTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 ENSMUST00000155662.2 ENSMUST00000186859.2 |
||
| CDS CCA 72 bp | CTAGATCATACCGCTGCCCAAAGCCCTTGCCACAAGTaGCACACACGTGCGGCCTTTCACCCTGATGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LDHTAAQSPCHK*HTRAAFHPDGC Trigger: GCAGCCATCAGGGTGAAAGGCCGCACGTGTGTGCCACTTGTGGCAAGGGCTTTGGGCAGCGGTATGATCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS CCA 72 bp | GCCATTGCAGCTGCTCGAGCCCTTCTGTGGGACCGCTaGTGCTGTGATAGCGACCGGCCATGGCTAAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: AIAAARALLWDR*CCDSDRPWLKN Trigger: ATTCTTTAGCCATGGCCGGTCGCTATCACAGCACCAGCGGTCCCACAGAAGGGCTCGAGCAGCTGCAATGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS TCA 72 bp | ATATGCCACATAGATGGGCCTCAGTGCCAGGGTCACTaGGGCTGGGGACCACATGGATGCGGGAATGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ICHIDGPQCQGH*GWGPHGCGNGS Trigger: GGAACCATTCCCGCATCCATGTGGTCCCCAGCCTCAGTGACCCTGGCACTGAGGCCCATCTATGTGGCATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS GCA 72 bp | GGTGCACTACTAGATCATACCGCTGCCCAAAGCCCTTaGCACAAGTGGCACACACGTGCGGCCTTTCACCCT | + |
|
Preference number: 6 (lower is better) Translates to: GALLDHTAAQSP*HKWHTRAAFHP Trigger: AGGGTGAAAGGCCGCACGTGTGTGCCACTTGTGGCAAGGGCTTTGGGCAGCGGTATGATCTAGTAGTGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS GCA 72 bp | ATTGCAGCTGCTCGAGCCCTTCTGTGGGACCGCTGGTaGTGTGATAGCGACCGGCCATGGCTAAAGAATTTG | + |
|
Preference number: 6 (lower is better) Translates to: IAAARALLWDRW*CDSDRPWLKNL Trigger: CAAATTCTTTAGCCATGGCCGGTCGCTATCACAGCACCAGCGGTCCCACAGAAGGGCTCGAGCAGCTGCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS GCA 72 bp | CACTCTGCTGTCCGCTCACCTAGGTGTGTCTTTCTGTaGAGTGCAAGCTTGGAGGCAACACTAAAGGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: HSAVRSPRCVFL*SASLEATLKDL Trigger: CAAGTCCTTTAGTGTTGCCTCCAAGCTTGCACTGCACAGAAAGACACACCTAGGTGAGCGGACAGCAGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS CCA 72 bp | CCGCACTCTGGGCACTTGTGTGGTTTATGGCCTGCATaGTTGCGCAAATGTACATTGAGGTTGGAAATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PHSGHLCGLWPA*LRKCTLRLEMQ Trigger: CTGCATTTCCAACCTCAATGTACATTTGCGCAACCATGCAGGCCATAAACCACACAAGTGCCCAGAGTGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
||
| CDS CAA 90 bp | GGGCACTTGTGTGGTTTATGGCCTGCATGGTTGCGCAAATGTACATaGAGGTTGGAAATGCAGGTGAATCGCTTGCCACACAACTCACAG | + |
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Preference number: 6 (lower is better) Translates to: GHLCGLWPAWLRKCT*RLEMQVNRLPHNSQ Trigger: CTGTGAGTTGTGTGGCAAGCGATTCACCTGCATTTCCAACCTCAATGTACATTTGCGCAACCATGCAGGCCATAAACCACACAAGTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| CDS TCA 72 bp | GACCGTGGGGTGTGCATTCAATACACTATCCCTGTCTaGCTGAGATTGATATTCCTGTGGTTTGTGGGGCGA | + |
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Preference number: 6 (lower is better) Translates to: DRGVCIQYTIPV*LRLIFLWFVGR Trigger: TCGCCCCACAAACCACAGGAATATCAATCTCAGTCAGACAGGGATAGTGTATTGAATGCACACCCCACGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065533.3 |
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| CDS CAA 72 bp | CACTCTGGGCACTTGTGTGGTTTATGGCCTGCATGGTaGCGCAAATGTACATTGAGGTTGGAAATGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: HSGHLCGLWPAW*RKCTLRLEMQV Trigger: CACCTGCATTTCCAACCTCAATGTACATTTGCGCAACCATGCAGGCCATAAACCACACAAGTGCCCAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| CDS CAA 72 bp | TGTGGTTTATGGCCTGCATGGTTGCGCAAATGTACATaGAGGTTGGAAATGCAGGTGAATCGCTTGCCACAC | + |
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Preference number: 6 (lower is better) Translates to: CGLWPAWLRKCT*RLEMQVNRLPH Trigger: GTGTGGCAAGCGATTCACCTGCATTTCCAACCTCAATGTACATTTGCGCAACCATGCAGGCCATAAACCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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| CDS CAA 72 bp | TTATGGCCTGCATGGTTGCGCAAATGTACATTGAGGTaGGAAATGCAGGTGAATCGCTTGCCACACAACTCA | + |
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Preference number: 6 (lower is better) Translates to: LWPAWLRKCTLR*EMQVNRLPHNS Trigger: TGAGTTGTGTGGCAAGCGATTCACCTGCATTTCCAACCTCAATGTACATTTGCGCAACCATGCAGGCCATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057836.12 ENSMUST00000064786.12 ENSMUST00000108829.8 |
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